Citrus Sinensis ID: 047215

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-
Protein Sequence
MERVLLFLVIMLVVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGIAATTDSLSGDSIYEPLYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGHSNKWILLVGIGAGIASVVVLAVIFALLFCYCKNWREKSSDPKNNSPGWWPLFFHRGTLNSTANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEFAEREAEDGQDAPTTDAENCLGLKMTGEVESATMGISK
Secondary Structure (PSIPRED)
ccEEEHHHHHHHHHHcccccccccEEEEcccccccccccccEEccccccccccccccccEEEcccccccccccccccEEEEcccccEEEEEEEccEEEEEEEEcccccccccccccEEEEEEccEEEEcccccccccccccccccccccccccccEEEEEEEEEccccEEEEEEcccccEEEEEEEEEEcccccccccccccccccccccccccccEEEEEEEEcccccccccccccccEEEccccccccccccccEEcccccEEEcccccccccHHHHHHHHHHccccccccccccEEEEEEEcccccEEEEEEEEEEEEcccccEEEEEEEccccccccccHHHHcccccccEEEEEEEccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccEEEcHHHHHHHHcccccccccccccccccEEEEEccccEEEEEEcccccccHHHHHHHHHHHHHcccccccccEEEEEccccEEEEEEEEcccccHHccccccccccccHHHHHHHHHHHHHHHHHcccccccccEEEcccccccccccccccccccccccccccccccccEEEEEEcccccccHHHHHHcccccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEEEEEEccccccccccEEEEccccccccccccEEEEccccccccccccccccccccccccccccccccEEEEEEccccEEEEEcccccEEEEEEEEEcccccccccccEEEEEEccEEEEcccccccEEccccccccccccccccccEEEEEEEEccccEEEEEEEcccccEEEEEEEEEEccccHccccccccccccccccccccccEEEEEEEccccccccccccccccEEcccccccccccccccEccccccEEcccccccccccHHHHHHHHHHccccccccccEEEEEEEcccccEEEEEEEEEEEEEcccccEEEEEEEcccEEcccccHHHHccccccEEEEEEEEEccccccEEEEEEcccccccccccccEEEEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccEEcHHHHHHHHcccccccEEEccccccEEEEEEccccEEEEEEcccccHccHHHHHHHHHHHHHHHHHHHHHEEccccccccEEEEEHHHccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccccEEcccccHHHEEEcccccEEEcccccccccccccccEEEEEEEcccccccHHHHHHHHccccccHHHHHHEHHHHHcccccccccccHHHHHHHHHHHHHHHcccHHHHccHHHcccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MERVLLFLVIMLVVARIgeaqsksflincgtnssvnvdgrkwvgdlasnnnvtlsssgiaattdslsgdsiyeplYKTARVFADGLNYTFEIIAGNYIvrlhfcpfpfedynvnkssFGVVANGLKLLsefsapgeishrnlylqssggnsssiSLVKEYFLGVDLDKLMIEfipskgsfgfinaieIVPVVDKLFADTinkvggndvnfnlsgrgvetmyrlnvggpeikpsrdpdlwrmweadSSYMITANagseirnssnityastndssvaPLLVYETARTMSNTEVLEKRFNMswkfevdpnfdyFVRLHFCELVYEKANQRIFRIYINnrtaennfdifvqaggknrgyhrdyFDAVSSKIETLWIqlgpdtavgaaGTDALLNGLEIfkfsqngnlasverfdssgnpvghsnkWILLVGIGAGIASVVVLAVIFALLFCYCknwrekssdpknnspgwwplffhrgtlnstanakgsgtqyLKGSVALTRAGKRFTLAEIRVAtnnfdeslmigvggfgkvfkgeIEDCTLAAIKRanpqseqgLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMAngtlrshlfgsdlppltwKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAkmsdfglsktgpsmehthvstavkgsfgyldpeyfwrqqlteksdvySFGVVLFEVVCARavinptlpkdqiNLADWAMKWQKQRSLksiidphlkgnyspesLEKFGEIAEKClddegknrptmgEVLWHLEYVLQLHEAWMrtddrqnsfsssQALGEFAereaedgqdapttdaenclglkmtgevesatmgisk
Flexible Loop (DISEMBL)
MERVLLFLVIMLVVARIgeaqsksflincgtnssvNVDGRKWVGDLASNnnvtlsssgiaattdslsgdsIYEPLYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKLFADTINkvggndvnfnlsgrGVETMyrlnvggpeikpsrdpdLWRMWEADSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGHSNKWILLVGIGAGIASVVVLAVIFALLFCYCKNWREKSSDPKNNSPGWWPLFFHRGTLNSTANAKGSGTQYLKGSVALTRAGKRFTLAEIRVAtnnfdeslmiGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVInptlpkdqiNLADWAMKWQKQRSLksiidphlkgnysPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEFAEreaedgqdapttdaenclglkmtgevesatmgisk
Low Complexity Region (SEG)
MERVLLFLVIMLVVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGIAATTDSLSGDSIYEPLYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGEISHRNLYLQssggnsssisLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGHSNKWILlvgigagiasvvvlavifallfCYCKNWREKSSDPKNNSPGWWPLFFHRGTLNSTANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMigvggfgkvfkgeieDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEFAEREAEDGQDAPTTDAENCLGLKMTGEVESATMGISK
Disordered region (IsUnstruct)
***VLLFLVIMLVVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGIAATTDSLSGDSIYEPLYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGEISHRNLYLQ*******SISLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEI*****PDLWRMWEADSSYMITANA*********ITYAS***SSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFD***NPVGHSNKWILLVGIGAGIASVVVLAVIFALLFCYCKNWR***********GWWPLFFHRGTLNSTANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKR********LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS********THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK**********FGEIAEKCL********TMGEVLWHLEYVLQLHEAWMR******************************************************
Disordered Region (DISOPRED)
*ERVLLFLVIMLVVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNN***********************LYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTM****VLEKRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQL******************************************************GAGIASVVVLAVIFALLFCY****************************************************KRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRAN*****GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV***************************************************************
Disordered Region (DISEMBL)
MERVLLFLVIMLVVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGIAATTDSLSGDSIYEPLYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGHSNKWILLVGIGAGIASVVVLAVIFALLFCYCKNWREKSSDPKNNSPGWWPLFFHRGTLNSTANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGE**************TDAENCLGLKMTGEV*********
Disordered Region (DISPRO)
MERVLLFLVIMLVVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLA************************YEPLYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLAS***************KWILLVGIGAGIASVVVLAVIFALLFCYCKNWR*******************************************TRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWM*******************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MERVLLFLVIMLVVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGIAATTDSLSGDSIYEPLYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGHSNKWILLVGIGAGIASVVVLAVIFALLFCYCKNWREKSSDPKNNSPGWWPLFFHRGTLNSTANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEFAEREAEDGQDAPTTDAENCLGLKMTGEVESATMGISK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	851	2.2.26 [Sep-21-2011]
Q9SA72	849	Probable receptor-like pr	yes	no	0.968	0.970	0.682	0.0
Q9LX66	830	Receptor-like protein kin	no	no	0.901	0.924	0.441	0.0
Q9LK35	855	Receptor-like protein kin	no	no	0.882	0.878	0.463	0.0
Q9FN92	829	Probable receptor-like pr	no	no	0.893	0.916	0.440	0.0
Q9T020	878	Probable receptor-like pr	no	no	0.881	0.854	0.439	1e-179
Q9SJT0	871	Probable receptor-like pr	no	no	0.882	0.862	0.438	1e-178
Q9SCZ4	895	Receptor-like protein kin	no	no	0.893	0.849	0.448	1e-177
Q3E8W4	858	Receptor-like protein kin	no	no	0.887	0.879	0.451	1e-177
Q9SR05	850	Receptor-like protein kin	no	no	0.922	0.923	0.435	1e-176
Q9FLJ8	842	Probable receptor-like pr	no	no	0.880	0.889	0.444	1e-174

>sp|Q9SA72|Y1357_ARATH Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1

 Score = 1170 bits (3026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 569/834 (68%), Positives = 670/834 (80%), Gaps = 10/834 (1%)

Query: 1   MERVLLFLVIMLVVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGIA 60
           +E +L  L+    V   GEAQSKSFL++CG+N++  VDGR WVGDL+ N +VTL   G  
Sbjct: 9   LEHLLCVLIFFTYVIGYGEAQSKSFLVDCGSNATTEVDGRTWVGDLSPNKSVTLQ--GFD 66

Query: 61  ATTDSLS-GDSIYEPLYKTARVFADGLNYTFE-IIAGNYIVRLHFCPFPFEDYNVNKSSF 118
           A T S S G S+Y  +YKTARVF   LNYTFE I  GNY VRLHF PF  E++NVN+SSF
Sbjct: 67  AITASTSKGSSVYAEIYKTARVFDAVLNYTFEGITQGNYFVRLHFSPFAIENHNVNESSF 126

Query: 119 GVVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKG 178
            V A+GL+L+ + +  GEI+H+NL L+S+G N+++ SLVKE+ L     KL++ FIP KG
Sbjct: 127 SVFADGLRLMLDINIAGEIAHKNLILESTGHNATASSLVKEFLLPTGPGKLVLSFIPEKG 186

Query: 179 SFGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDL 238
           SFGF+NAIEIV V DKLF +++ KVGG++V   L GRG+ETMYRLNVGGP++ PS+D  L
Sbjct: 187 SFGFVNAIEIVSVDDKLFKESVTKVGGSEVELGLGGRGIETMYRLNVGGPKLGPSKDLKL 246

Query: 239 WRMWEADSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNM 298
           +R WE D SYM+  NAG E++NSSNITYA  +DS VAPLLVYETAR MSNTEVLEKRFN+
Sbjct: 247 YRTWETDLSYMVIENAGVEVKNSSNITYALADDSPVAPLLVYETARMMSNTEVLEKRFNI 306

Query: 299 SWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRD 358
           SWKFEVDPNFDY VRLHFCEL+ +K NQRIFRIYINN+TA  NFDIF  AGGKN+G ++D
Sbjct: 307 SWKFEVDPNFDYLVRLHFCELLVDKQNQRIFRIYINNQTAAGNFDIFAHAGGKNKGIYQD 366

Query: 359 YFDAVSSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGH 418
           Y D VSSK + LWIQLGPD++VGA+G DALL+GLEIFK S+NGNLA + RFDS+G+ V  
Sbjct: 367 YLDPVSSKNDVLWIQLGPDSSVGASG-DALLSGLEIFKLSKNGNLAHLIRFDSTGHSVSD 425

Query: 419 SNKWILLVGIGAGIASVVVLAVIFALLFCYCKNWREKSSDPKNNSPGWWPLFFHRGTLNS 478
           S   I+ + +GAGIA ++    +  L+ C CK  R KS + KNN PGW PLF H    NS
Sbjct: 426 SKMRIIWISVGAGIAIIIFFVFLGILVVCLCKKRRSKSDESKNNPPGWRPLFLHVN--NS 483

Query: 479 TANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCT 538
           TANAK +G      ++A +  G++FTLAEIR AT NFD+ L IGVGGFGKV++GE+ED T
Sbjct: 484 TANAKATGGSLRLNTLAASTMGRKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGT 543

Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
           L AIKRA P S+QGLAEFETEI MLS+LRHRHLVSLIGFCDE NEMILVYEYMANGTLRS
Sbjct: 544 LIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRS 603

Query: 599 HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF 658
           HLFGS+LPPL+WKQRL+ACIG+ARGLHYLHTG+ERGIIHRDVKTTNILLDENFVAKMSDF
Sbjct: 604 HLFGSNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDF 663

Query: 659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINP 718
           GLSK GPSM+HTHVSTAVKGSFGYLDPEYF RQQLTEKSDVYSFGVVLFE VCARAVINP
Sbjct: 664 GLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINP 723

Query: 719 TLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTM 778
           TLPKDQINLA+WA+ WQKQR+L+SIID +L+GNYSPESLEK+GEIAEKCL DEGKNRP M
Sbjct: 724 TLPKDQINLAEWALSWQKQRNLESIIDSNLRGNYSPESLEKYGEIAEKCLADEGKNRPMM 783

Query: 779 GEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEFAER---EAEDGQDAPTTD 829
           GEVLW LEYVLQ+HEAW+R  + +NSFSSSQA+ E  E     A   QD+  T+
Sbjct: 784 GEVLWSLEYVLQIHEAWLRKQNGENSFSSSQAVEEAPESFTLPACSNQDSSETE 837

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q9LX66|HERK_ARATH Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/822 (44%), Positives = 504/822 (61%), Gaps = 55/822 (6%)

Query: 4   VLLFLVIMLVVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGIAATT 63
           +L+  + +L+    G     ++LINCG+ ++  + GR ++ D  S+  +T SS  I A+ 
Sbjct: 10  ILISTISILLCICHGFTPVDNYLINCGSPTNGTLMGRIFLSDKLSSKLLT-SSKEILASV 68

Query: 64  DSLSGDSIYEPLYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFGVVAN 123
              SG  IY     TARVF +  +Y F +  G + VRL+F PF ++++ +  + F V + 
Sbjct: 69  GGNSGSDIYH----TARVFTEVSSYKFSVTRGRHWVRLYFNPFDYQNFKMGSAKFAVSSQ 124

Query: 124 GLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFI 183
              LLS+F+                   +S  +VKEY L V  + L++ F PS GSF F+
Sbjct: 125 SHVLLSDFTV------------------TSSKVVKEYSLNVTTNDLVLTFTPSSGSFAFV 166

Query: 184 NAIEIVPVVDKLFADTINKVGGNDVNF-NLSGRGVETMYRLNVGGPEIKPSRDPDLWRMW 242
           NAIE++ + D L   +   VG N   F ++S +G+ET++R+N+GGP +  + D  L R W
Sbjct: 167 NAIEVISIPDTLITGSPRFVG-NPAQFPDMSMQGLETIHRVNMGGPLVASNND-TLTRTW 224

Query: 243 EADSSYMITANAGSEIRNSSNITYA---STNDSSVAPLLVYETARTMSNTEVLEKRFNMS 299
             DS +++  N    +   S + +    +T DS  AP  VY +   M++ +     FN++
Sbjct: 225 VPDSEFLLEKNLAKSMSKFSTVNFVPGYATEDS--APRTVYGSCTEMNSADNPNSIFNVT 282

Query: 300 WKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRG-YHRD 358
           W+F+VDP F Y+ R HFC++V    NQ  F +Y+++  A  + D+         G Y  D
Sbjct: 283 WEFDVDPGFQYYFRFHFCDIVSLSLNQLYFNLYVDSMVAATDIDLSTLVDNTLAGAYSMD 342

Query: 359 YFDAVSSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGH 418
           +          + + +GP T V     +A++NGLEI K + +    S   F    +    
Sbjct: 343 FVTQTPKGSNKVRVSIGPST-VHTDYPNAIVNGLEIMKMNNSKGQLSTGTFVPGSSSSSK 401

Query: 419 SNKWILLVGIGAGIASVVVLAVIFALLFCYCKNWREKSSDPKNNSPGWWPLFFHRGTLNS 478
           SN  ++   +G+ I S+  LAV+F L  C+   ++++      +S  W P          
Sbjct: 402 SNLGLI---VGSAIGSL--LAVVF-LGSCFVL-YKKRKRGQDGHSKTWMPF--------- 445

Query: 479 TANAKGSGTQYLKGSV---ALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIE 535
           + N    G++Y  G+      T A  R   A ++ ATNNFDES  IGVGGFGKV+KGE+ 
Sbjct: 446 SINGTSMGSKYSNGTTLTSITTNANYRIPFAAVKDATNNFDESRNIGVGGFGKVYKGELN 505

Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D T  A+KR NP+S+QGLAEF TEIEMLS+ RHRHLVSLIG+CDE NEMIL+YEYM NGT
Sbjct: 506 DGTKVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGT 565

Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           ++SHL+GS LP LTWKQRL+ CIGAARGLHYLHTG  + +IHRDVK+ NILLDENF+AK+
Sbjct: 566 VKSHLYGSGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKV 625

Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           +DFGLSKTGP ++ THVSTAVKGSFGYLDPEYF RQQLT+KSDVYSFGVVLFEV+CAR V
Sbjct: 626 ADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPV 685

Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
           I+PTLP++ +NLA+WAMKWQK+  L  IID  L+GN  P+SL KF E  EKCL D G +R
Sbjct: 686 IDPTLPREMVNLAEWAMKWQKKGQLDQIIDQSLRGNIRPDSLRKFAETGEKCLADYGVDR 745

Query: 776 PTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEFAER 817
           P+MG+VLW+LEY LQL EA +  +   N   S+  +GE   +
Sbjct: 746 PSMGDVLWNLEYALQLQEAVIDGEPEDN---STNMIGELPPQ 784

Receptor-like protein kinase required for cell elongation during vegetative growth, mostly in a brassinosteroid-(BR-) independent manner.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LK35|THE1_ARATH Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1

 Score =  660 bits (1702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/792 (46%), Positives = 499/792 (63%), Gaps = 41/792 (5%)

Query: 25  FLINCGTNSSVNVDGRKWVGD-LASNNNVTLSSSGIAATTDSLSGDSIYEPLYKTARVFA 83
           +LI+CG++ ++    R +V D L S+  + + +S +A +T S +  +    +Y+TARVF+
Sbjct: 32  YLISCGSSQNITFQNRIFVPDSLHSSLVLKIGNSSVATSTTSNNSTNS---IYQTARVFS 88

Query: 84  DGLNYTFEIIA-GNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGEISHRNL 142
              +Y F+I + G + +RLHF P     +N+  +S  VV     LL+ FS          
Sbjct: 89  SLASYRFKITSLGRHWIRLHFSPINNSTWNLTSASITVVTEDFVLLNNFSFNNFNGSY-- 146

Query: 143 YLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKLFADTINK 202
                        + KEY + V  + L + FIPS  S  F+NAIE+V V D L  D    
Sbjct: 147 -------------IFKEYTVNVTSEFLTLSFIPSNNSVVFVNAIEVVSVPDNLIPDQALA 193

Query: 203 VGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYM-ITANAGSEIRNS 261
           +  +     LS    ET+YRLN+GGP +  S++  L R W+ D+ Y+ + ++      N 
Sbjct: 194 LNPSTPFSGLSLLAFETVYRLNMGGPLLT-SQNDTLGRQWDNDAEYLHVNSSVLVVTANP 252

Query: 262 SNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVY 321
           S+I Y+ +     AP +VY TA TM +  V    FN++W   VDP+F YFVR+HFC++V 
Sbjct: 253 SSIKYSPSVTQETAPNMVYATADTMGDANVASPSFNVTWVLPVDPDFRYFVRVHFCDIVS 312

Query: 322 EKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIE-TLWIQLGPDTAV 380
           +  N  +F +Y+N+  A  + D+     G    Y +D+    S +    L + +GPD+  
Sbjct: 313 QALNTLVFNLYVNDDLALGSLDLSTLTNGLKVPYFKDFISNGSVESSGVLTVSVGPDSQ- 371

Query: 381 GAAGTDALLNGLEIFKFSQNG-NLASVERFDSSGNPVGHSNKWILLVGIGAGIASVVVLA 439
            A  T+A +NGLE+ K S    +L+ V    S       S      V IG+ + +V ++ 
Sbjct: 372 -ADITNATMNGLEVLKISNEAKSLSGVSSVKSLLPGGSGSKSKKKAVIIGSLVGAVTLIL 430

Query: 440 VIFALLFCYC---KNWREKSSDPKNNSPG--WWPLFFH---RGTLNSTANAKGSGTQYLK 491
           +I   + CYC    + +++S+ P+    G  W PL  +   +    STA+ K +    + 
Sbjct: 431 LI--AVCCYCCLVASRKQRSTSPQEGGNGHPWLPLPLYGLSQTLTKSTASHKSATASCI- 487

Query: 492 GSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQ 551
            S+A T  G+ F   EI  ATN FDES ++GVGGFG+V+KG +ED T  A+KR NP+SEQ
Sbjct: 488 -SLASTHLGRCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKRGNPRSEQ 546

Query: 552 GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWK 611
           G+AEF TEIEMLSKLRHRHLVSLIG+CDE++EMILVYEYMANG LRSHL+G+DLPPL+WK
Sbjct: 547 GMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWK 606

Query: 612 QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH 671
           QRL+ CIGAARGLHYLHTGA + IIHRDVKTTNILLDEN VAK++DFGLSKTGPS++ TH
Sbjct: 607 QRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTH 666

Query: 672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA 731
           VSTAVKGSFGYLDPEYF RQQLTEKSDVYSFGVVL EV+C R  +NP LP++Q+N+A+WA
Sbjct: 667 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWA 726

Query: 732 MKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL 791
           M WQK+  L  I+D +L G  +P SL+KFGE AEKCL + G +RP+MG+VLW+LEY LQL
Sbjct: 727 MAWQKKGLLDQIMDSNLTGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQL 786

Query: 792 HE---AWMRTDD 800
            E   A M  DD
Sbjct: 787 EETSSALMEPDD 798

Receptor-like protein kinase required for cell elongation during vegetative growth, mostly in a brassinosteroid-(BR-) independent manner. Mediates the response of growing plant cells to the perturbation of cellulose synthesis and may act as a cell-wall-integrity sensor. Controls ectopic-lignin accumulation in cellulose-deficient mutant backgrounds.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9FN92|Y5597_ARATH Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=1 SV=1

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/809 (44%), Positives = 497/809 (61%), Gaps = 49/809 (6%)

Query: 12  LVVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGIAATTDSLSGDSI 71
           L+    G     ++LINCG++++V V  R ++ D  ++N +T  +  +AA+  + + D  
Sbjct: 18  LIFLCYGYVPVDNYLINCGSSTNVTVTSRVFISDNLASNFLTSPNEILAASNRNSNSD-- 75

Query: 72  YEPLYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEF 131
              +Y+TAR+F     Y F +  G + +RLHF PF ++++ +  + F V +    LLS+F
Sbjct: 76  ---IYQTARIFTGISKYRFSVARGRHWIRLHFNPFQYQNFQMVSAKFSVSSETHVLLSDF 132

Query: 132 SAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPV 191
           +    +S R               ++KEY L V  D L + F PS  SF F+NA+E+V V
Sbjct: 133 T----VSSR---------------VMKEYSLNVATDHLELTFTPSGDSFAFLNALEVVSV 173

Query: 192 VDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMIT 251
            D LF+   +  G       LS + +ET+YR+N+GGP + PS D  L R+WE DS +++ 
Sbjct: 174 PDTLFSGDPSFAGSPGKFQGLSWQALETVYRVNMGGPRVTPSND-TLSRIWEPDSEFLVE 232

Query: 252 ANAGSEIRNSSNITYAST-NDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDY 310
            N    +   +++ Y         AP  VY T   M++ +     FN++W F+VDP F Y
Sbjct: 233 KNLVKSVSKIASVDYVPGFATEETAPRTVYGTCTEMNSADNPSSNFNVTWDFDVDPGFQY 292

Query: 311 FVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRG-YHRDYFDAVSSKIET 369
           F+R HFC++V +  NQ  F +Y+++     N D+         G Y  D+    +   + 
Sbjct: 293 FLRFHFCDIVSKALNQLYFNLYVDSMDVVENLDLSSYLSNTLSGAYAMDFVTGSAKLTKR 352

Query: 370 LWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGHSNKWILLVGIG 429
           + + +G  ++V      A+LNGLEI K + + +  S+  F  SG+         +++G+ 
Sbjct: 353 IRVSIG-RSSVHTDYPTAILNGLEIMKMNNSKSQLSIGTFLPSGSSSTTKKNVGMIIGLT 411

Query: 430 AG-IASVVVLAVIFALLFCYCKNWREKSSDPKNNSPGWWPLFFHRGTLNSTANAKGSGTQ 488
            G + ++VVL   F L       ++++  D   NS  W PL        S+     S   
Sbjct: 412 IGSLLALVVLGGFFVL-------YKKRGRDQDGNSKTWIPL--------SSNGTTSSSNG 456

Query: 489 YLKGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQ 548
               S+A + +  R  L  ++ ATN+FDE+  IGVGGFGKV+KGE+ D T  A+KRANP+
Sbjct: 457 TTLASIA-SNSSYRIPLVAVKEATNSFDENRAIGVGGFGKVYKGELHDGTKVAVKRANPK 515

Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           S+QGLAEF TEIEMLS+ RHRHLVSLIG+CDE NEMILVYEYM NGTL+SHL+GS L  L
Sbjct: 516 SQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYGSGLLSL 575

Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
           +WKQRL+ CIG+ARGLHYLHTG  + +IHRDVK+ NILLDEN +AK++DFGLSKTGP ++
Sbjct: 576 SWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEID 635

Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLA 728
            THVSTAVKGSFGYLDPEYF RQQLTEKSDVYSFGVV+FEV+CAR VI+PTL ++ +NLA
Sbjct: 636 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLA 695

Query: 729 DWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV 788
           +WAMKWQK+  L+ IIDP L+G   P+SL KFGE  EKCL D G +RP+MG+VLW+LEY 
Sbjct: 696 EWAMKWQKKGQLEHIIDPSLRGKIRPDSLRKFGETGEKCLADYGVDRPSMGDVLWNLEYA 755

Query: 789 LQLHEAWMRTDDRQNSFSSSQALGEFAER 817
           LQL EA +  D       S+  +GE   R
Sbjct: 756 LQLQEAVVDGDPED----STNMIGELPLR 780

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9T020|Y4391_ARATH Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1

 Score =  628 bits (1619), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 346/787 (43%), Positives = 474/787 (60%), Gaps = 37/787 (4%)

Query: 18  GEAQSKSFLINCGTNSSVNV-DGRKWVGDLASNNNVTLSSSGIAATTDSLSGDSIYEPLY 76
           G   +   LI+CG+ SS    DGR +  D  +   +        +   S   D +  P+Y
Sbjct: 51  GFKPADDILIDCGSKSSSKTPDGRVFKSDQETIQYIEAKEDIQVSAPPS---DKVASPIY 107

Query: 77  KTARVFADGLNYTFEII-AGNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPG 135
            TAR+F +   Y F +   G + VRLHF  FP + +++ +++F V+     LL  F    
Sbjct: 108 LTARIFREEATYKFHLTRPGWHWVRLHFLAFPNDKFDLQQATFSVLTEKYVLLHNF---- 163

Query: 136 EISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKL 195
           +IS+ N        N S  ++ KEY + +   +  + F P K S  FINAIE+V   D+L
Sbjct: 164 KISNNN--------NDSQAAVQKEYLVNMTDAQFALRFRPMKSSAAFINAIEVVSAPDEL 215

Query: 196 FADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAG 255
            +D+   +        LS    +++YR+NVGGP I P  D  L R W  D  ++   N  
Sbjct: 216 ISDSGTALFPVIGFSGLSDYAYQSVYRVNVGGPLIMPQND-TLGRTWIPDKEFLKDENLA 274

Query: 256 SEIRNS-SNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRL 314
            +++ + S I Y       +AP  VY TA  M+N+  ++  FN+SW F  +P+F+Y +RL
Sbjct: 275 KDVKTTPSAIKYPPEVTPLIAPQTVYATAVEMANSLTIDPNFNVSWNFPSNPSFNYLIRL 334

Query: 315 HFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQL 374
           HFC++V +  N   F +YIN +TA +  D+   AG     Y++D     +     L +Q+
Sbjct: 335 HFCDIVSKSLNDLYFNVYINGKTAISGLDLSTVAGNLAAPYYKDIVVNATLMGPELQVQI 394

Query: 375 GP---DTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGHSNKWILLVGIGAG 431
           GP   DT       +A+LNG+E+ K S + N    E F   G   G     ++       
Sbjct: 395 GPMGEDTGT----KNAILNGVEVLKMSNSVNSLDGE-FGVDGRTTGMGKHGMV------A 443

Query: 432 IASVVVLAVIFALLFCYCKNWREKSSD-PKNNSPGWWPLFFHRGTLNSTANAKGSGTQYL 490
            A  V++   F  L      W+++  D  K NS   W L  H G  +ST      G+Q  
Sbjct: 444 TAGFVMMFGAFIGLGAMVYKWKKRPQDWQKRNSFSSWLLPIHAG--DSTFMTSKGGSQKS 501

Query: 491 KGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSE 550
               +    G+ F+L+E++ AT NF+ S +IGVGGFG V+ G ++D T  A+KR NPQSE
Sbjct: 502 NFYNSTLGLGRYFSLSELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVKRGNPQSE 561

Query: 551 QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTW 610
           QG+ EF+TEI+MLSKLRHRHLVSLIG+CDE +EMILVYE+M+NG  R HL+G +L PLTW
Sbjct: 562 QGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGKNLAPLTW 621

Query: 611 KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT 670
           KQRL+ CIG+ARGLHYLHTG  +GIIHRDVK+TNILLDE  VAK++DFGLSK   +    
Sbjct: 622 KQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDV-AFGQN 680

Query: 671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADW 730
           HVSTAVKGSFGYLDPEYF RQQLT+KSDVYSFGVVL E +CAR  INP LP++Q+NLA+W
Sbjct: 681 HVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEW 740

Query: 731 AMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
           AM+W+++  L+ IIDPHL G  +PES++KF E AEKCL+D G +RPTMG+VLW+LEY LQ
Sbjct: 741 AMQWKRKGLLEKIIDPHLAGTINPESMKKFAEAAEKCLEDYGVDRPTMGDVLWNLEYALQ 800

Query: 791 LHEAWMR 797
           L EA+ +
Sbjct: 801 LQEAFTQ 807

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9SJT0|Y2214_ARATH Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=3 SV=1

 Score =  624 bits (1610), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 343/782 (43%), Positives = 465/782 (59%), Gaps = 31/782 (3%)

Query: 18  GEAQSKSFLINCGTNSSVNV-DGRKWVGDLASNNNVTLSSSGIAATTDSLSGDSIYEPLY 76
           G   +   LI+CG+ SS    +GR +  D   +  V    +       +   D +  P+Y
Sbjct: 50  GFKPADDILIDCGSKSSTKTPEGRVFKSD---SETVQYIEAKDDIQVSAPPSDKLPSPIY 106

Query: 77  KTARVFADGLNYTFEII-AGNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPG 135
            TA++F +   Y F +   G + VRLHF  FP + +++ +++F V+     LL  F    
Sbjct: 107 LTAKIFREEAIYKFHLTRPGWHWVRLHFFAFPNDKFDLQQATFSVLTEKYVLLHNF---- 162

Query: 136 EISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKL 195
           ++S+ N        N S  ++ KEY L +   +  + F P KGS  FIN IE+V   D+L
Sbjct: 163 KLSNDN--------NDSQATVQKEYLLNMTDAQFALRFKPMKGSAAFINGIELVSAPDEL 214

Query: 196 FADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAG 255
            +D    +   +    LS    +++YR+NVGGP I P  D  L R W  D  Y+   N  
Sbjct: 215 ISDAGTSLFPVNGFSGLSDYAYQSVYRVNVGGPLITPQND-TLGRTWTPDKEYLKDENLA 273

Query: 256 SEIR-NSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRL 314
            +++ N + I Y       +AP  VY T   M++++ ++  FN++W F  +P+F YF+RL
Sbjct: 274 KDVKTNPTAIIYPPGVTPLIAPQTVYATGAEMADSQTIDPNFNVTWNFPSNPSFHYFIRL 333

Query: 315 HFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQL 374
           HFC+++ +  N   F +YIN +TA +  D+   AG  +  Y++D     +     L +Q+
Sbjct: 334 HFCDIISKSLNDLYFNVYINGKTAISGLDLSTVAGDLSAPYYKDIVVNSTLMTSELQVQI 393

Query: 375 GPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGHSNKWILLVGIGAGIAS 434
           GP         +A+LNG+E+ K S + N    E F   G       + ++        A 
Sbjct: 394 GP-MGEDTGKKNAILNGVEVLKMSNSVNSLDGE-FGVDGQRASMGKQGMV------ATAG 445

Query: 435 VVVLAVIFALLFCYCKNWREKSSD-PKNNSPGWWPLFFHRGTLNSTANAKGSGTQYLKGS 493
            V++   F  L      W+++  D  K NS   W L  H G      +  GS    L  S
Sbjct: 446 FVMMFGAFVGLGAMVYKWKKRPQDWQKRNSFSSWLLPIHAGDSTFMTSKTGSHKSNLYNS 505

Query: 494 VALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGL 553
                 G+ F+L+E++  T NFD S +IGVGGFG V+ G I+D T  AIKR NPQSEQG+
Sbjct: 506 A--LGLGRYFSLSELQEVTKNFDASEIIGVGGFGNVYIGTIDDGTQVAIKRGNPQSEQGI 563

Query: 554 AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQR 613
            EF TEI+MLSKLRHRHLVSLIG+CDE  EMILVYEYM+NG  R HL+G +L PLTWKQR
Sbjct: 564 TEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYGKNLSPLTWKQR 623

Query: 614 LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS 673
           L+ CIGAARGLHYLHTG  +GIIHRDVK+TNILLDE  VAK++DFGLSK   +    HVS
Sbjct: 624 LEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKD-VAFGQNHVS 682

Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMK 733
           TAVKGSFGYLDPEYF RQQLT+KSDVYSFGVVL E +CAR  INP LP++Q+NLA+WAM 
Sbjct: 683 TAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAML 742

Query: 734 WQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE 793
           W+++  L+ IIDPHL G  +PES++KF E AEKCL D G +RPTMG+VLW+LEY LQL E
Sbjct: 743 WKQKGLLEKIIDPHLVGAVNPESMKKFAEAAEKCLADYGVDRPTMGDVLWNLEYALQLQE 802

Query: 794 AW 795
           A+
Sbjct: 803 AF 804

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9SCZ4|FERON_ARATH Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1

 Score =  624 bits (1608), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 359/801 (44%), Positives = 483/801 (60%), Gaps = 41/801 (5%)

Query: 20  AQSKSFLINCGTNSS--VNVDGRKWVGDLASNNNVTLSSSGIAATTDSLSGD-SIYEPLY 76
           + ++  L+NCG  +S   + D R W+ D+ S      SSS  + T+ +L+ D S+ E  Y
Sbjct: 31  SPTEKILLNCGGGASNLTDTDNRIWISDVKSK--FLSSSSEDSKTSPALTQDPSVPEVPY 88

Query: 77  KTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGE 136
            TARVF     YTF + +G   VRL+F P  ++  N   S F V      LL  FSA   
Sbjct: 89  MTARVFRSPFTYTFPVASGRKFVRLYFYPNSYDGLNATNSLFSVSFGPYTLLKNFSAS-- 146

Query: 137 ISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKG---SFGFINAIEIVPVVD 193
                   Q++   + +  ++KE+ + V+   L + F P      ++ F+N IE+  + D
Sbjct: 147 --------QTAEALTYAF-IIKEFVVNVEGGTLNMTFTPESAPSNAYAFVNGIEVTSMPD 197

Query: 194 KLFAD--TINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMIT 251
              +   T+  VG +      +   +E +YRLNVGG +I PS D  L+R W  D  Y+  
Sbjct: 198 MYSSTDGTLTMVGSSGSVTIDNSTALENVYRLNVGGNDISPSADTGLYRSWYDDQPYIFG 257

Query: 252 ANAGSEIRNSSNIT--YASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFD 309
           A  G       N+T  Y +   + VAP+ VY TAR+M  T  +   +N++W F +D  F 
Sbjct: 258 AGLGIPETADPNMTIKYPTGTPTYVAPVDVYSTARSMGPTAQINLNYNLTWIFSIDSGFT 317

Query: 310 YFVRLHFCELV--YEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYF--DAVSS 365
           Y VRLHFCE+     K NQR+F IY+NN+TAE   D+          +H+DY       +
Sbjct: 318 YLVRLHFCEVSSNITKINQRVFTIYLNNQTAEPEADVIAWTSSNGVPFHKDYVVNPPEGN 377

Query: 366 KIETLWIQLGPDTAVGAAGTDALLNGLEIFKF-SQNGNLASVERF-------DSSG--NP 415
             + LW+ L P+        D+LLNG+EIFK  + +GNLA            D S    P
Sbjct: 378 GQQDLWLALHPNPVNKPEYYDSLLNGVEIFKMNTSDGNLAGTNPIPGPQVTADPSKVLRP 437

Query: 416 VGHSNKWILLVGIGAGIASVVVLAVI-FALLFCYCKNWREKSSDPKNNSPGWWPLFFHRG 474
               +K    +  GA   +VV+  +I F +   Y +  R       + + GW PL  + G
Sbjct: 438 TTRKSKSNTAIIAGAASGAVVLALIIGFCVFGAYRRRKRGDYQPASDATSGWLPLSLY-G 496

Query: 475 TLNSTANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEI 534
             +S  +AK + T     S+  +   + F+ AEI+ AT NFDES ++GVGGFGKV++GEI
Sbjct: 497 NSHSAGSAKTNTTGSYASSLP-SNLCRHFSFAEIKAATKNFDESRVLGVGGFGKVYRGEI 555

Query: 535 ED-CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMAN 593
           +   T  AIKR NP SEQG+ EF+TEIEMLSKLRHRHLVSLIG+C+E  EMILVY+YMA+
Sbjct: 556 DGGTTKVAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAH 615

Query: 594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA 653
           GT+R HL+ +  P L WKQRL+ CIGAARGLHYLHTGA+  IIHRDVKTTNILLDE +VA
Sbjct: 616 GTMREHLYKTQNPSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVA 675

Query: 654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           K+SDFGLSKTGP+++HTHVST VKGSFGYLDPEYF RQQLTEKSDVYSFGVVLFE +CAR
Sbjct: 676 KVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCAR 735

Query: 714 AVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGK 773
             +NPTL K+Q++LA+WA    K+  L  I+DP+LKG  +PE  +KF E A KC+ D+G 
Sbjct: 736 PALNPTLAKEQVSLAEWAPYCYKKGMLDQIVDPYLKGKITPECFKKFAETAMKCVLDQGI 795

Query: 774 NRPTMGEVLWHLEYVLQLHEA 794
            RP+MG+VLW+LE+ LQL E+
Sbjct: 796 ERPSMGDVLWNLEFALQLQES 816

Receptor-like protein kinase that mediates the female control of male gamete delivery during fertilization, including growth cessation of compatible pollen tubes ensuring a reproductive isolation barriers. Required for cell elongation during vegetative growth, mostly in a brassinosteroids- (BR-) independent manner.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q3E8W4|ANX2_ARATH Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1

 Score =  621 bits (1602), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 372/824 (45%), Positives = 494/824 (59%), Gaps = 69/824 (8%)

Query: 5   LLFLVIMLVVARIGEAQSKSFLINCG-TNSSVNVDGRKWVGD---LASNNNV----TLSS 56
           L F  ++LV       Q  S  ++CG +  +V+ D +KW  D   L + N V    T   
Sbjct: 12  LCFFYVLLVSPSQSNGQDIS--LSCGASEPAVDQDKKKWEPDTKFLKTPNTVHAPATYQD 69

Query: 57  SGIAATTDSLSGDSIYEPLYKTARVFADGLNYTFEIIAGN-YIVRLHFCPFPFEDYNVNK 115
             + +T             Y T+R+F     Y   +     +++RLHF P  +   N+  
Sbjct: 70  PSLLSTVP-----------YMTSRIFTAPATYEIPVKGDKRHMLRLHFYPSTYTGLNILD 118

Query: 116 SSFGVVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLG-VDLDKLMIEFI 174
           S F V AN L LLS FSA   I+ + L         +   LV+EY L   + D L I F 
Sbjct: 119 SYFSVAANDLTLLSNFSA--AITCQAL---------TQAYLVREYSLAPSEKDVLSIIFT 167

Query: 175 PS---KGSFGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIK 231
           PS     +F FIN IE++P+ + LF DT + VG +D   +     ++TM+RLNVGG +I 
Sbjct: 168 PSDKHPKAFAFINGIEVIPMPE-LF-DTASLVGFSDQTSDTKTANLQTMFRLNVGGQDIP 225

Query: 232 PSRDPD-LWRMWEADSSYMITANAGSEIRNSSN--ITYASTNDSSVAPLLVYETARTMSN 288
            S+D   L R W  D+ Y+ +A  G  ++ S+N  I Y      S AP  VY+TAR+   
Sbjct: 226 GSQDSGGLTRTWYNDAPYIFSAGLGVTLQASNNFRIDYQKM-PVSTAPADVYKTARSQGP 284

Query: 289 TEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAE---NNFDIF 345
              +  + N++W F+VD NF Y +RLHFCE    K NQ++F I+INNRTA+   N  DI 
Sbjct: 285 NGDINMKSNLTWMFQVDTNFTYIMRLHFCEFQLAKINQKVFNIFINNRTAQGDTNPADIL 344

Query: 346 VQAGGKNRGYHRDYFDAVSSKI----ETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNG 401
              GGK    ++DY   V +      E + +Q+ P T       D+ LNGLEIFK     
Sbjct: 345 GWTGGKGIPTYKDYAIYVDANTGGGGEEISLQMTPSTFGQPEYYDSQLNGLEIFKIDTMK 404

Query: 402 NLASVE--------RFDSSGNPVGHSNKWILLVGIGAGIASVVVLAVIFALLFCYCKNWR 453
           NLA             D   +  G       ++G   G+A+V+  A+ F +   Y +  +
Sbjct: 405 NLAGPNPKPSPMQANEDVKKDFQGDKRITAFVIGSAGGVAAVLFCALCFTM---YQRKRK 461

Query: 454 EKSSDPKNNSPGWWPLF--FHRGTLNSTANAKGSGTQYLKGSVA-LTRAGKRFTLAEIRV 510
              SD   +S  W P++   H     ST + K +   +L    A L R   RF+L+EI+ 
Sbjct: 462 FSGSDSHTSS--WLPIYGNSHTSATKSTISGKSNNGSHLSNLAAGLCR---RFSLSEIKH 516

Query: 511 ATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRH 570
            T+NFDES +IGVGGFGKV+KG I+  T  AIK++NP SEQGL EFETEIE+LS+LRH+H
Sbjct: 517 GTHNFDESNVIGVGGFGKVYKGVIDGGTKVAIKKSNPNSEQGLNEFETEIELLSRLRHKH 576

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
           LVSLIG+CDE  EM L+Y+YM+ GTLR HL+ +  P LTWK+RL+  IGAARGLHYLHTG
Sbjct: 577 LVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTKRPQLTWKRRLEIAIGAARGLHYLHTG 636

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
           A+  IIHRDVKTTNILLDEN+VAK+SDFGLSKTGP+M   HV+T VKGSFGYLDPEYF R
Sbjct: 637 AKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRR 696

Query: 691 QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG 750
           QQLTEKSDVYSFGVVLFEV+CAR  +NP+L K+Q++L DWAM  +++ +L+ IIDP+LKG
Sbjct: 697 QQLTEKSDVYSFGVVLFEVLCARPALNPSLSKEQVSLGDWAMNCKRKGTLEDIIDPNLKG 756

Query: 751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEA 794
             +PE L+KF + AEKCL D G +RPTMG+VLW+LE+ LQL E 
Sbjct: 757 KINPECLKKFADTAEKCLSDSGLDRPTMGDVLWNLEFALQLQET 800

Receptor-like protein kinase that controls pollen tube behavior by directing rupture at proper timing to release the sperm cell.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SR05|ANX1_ARATH Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1

 Score =  620 bits (1598), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 364/835 (43%), Positives = 502/835 (60%), Gaps = 50/835 (5%)

Query: 3   RVLLFLVIM-LVVARIGEAQSKSFLINCGTN-SSVNVDGRKWVGDLASNNNVTLSSSGIA 60
           R+L FL  +  ++     +  +   ++CGT+ +S + D +KW  D         + + I 
Sbjct: 6   RILFFLTCLSFLLVFPTRSNGQDLALSCGTSEASADQDKKKWEPD----TKFLKTGNSIH 61

Query: 61  ATTDSLSGDSIYEPLYKTARVFADGLNYTFEIIAGN-YIVRLHFCPFPFEDYNVNKSSFG 119
           AT        +    Y TAR+F     Y   I     +++RL+F P  +   N++ S F 
Sbjct: 62  ATATYQDPSLLSTVPYMTARIFTAPATYEIPIKGDKRHLLRLYFYPSTYTGLNISNSYFT 121

Query: 120 VVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLG-VDLDKLMIEFIPS-- 176
           V AN + LLS FSA   I+ + L         +   LVKEY L   D D L I+F PS  
Sbjct: 122 VEANDVTLLSNFSA--AITCQAL---------TQAYLVKEYSLAPTDKDVLSIKFTPSDK 170

Query: 177 -KGSFGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRD 235
            + +F FIN IE++ + + LF DT   VG  D   +     +++M+RLNVGG +I  S+D
Sbjct: 171 YRDAFAFINGIEVIQMPE-LF-DTAALVGFTDQTMDAKTANLQSMFRLNVGGQDIPGSQD 228

Query: 236 PD-LWRMWEADSSYMITANAGSEIRNSSNITYASTN-DSSVAPLLVYETARTMSNTEVLE 293
              L R W  D+ Y+ +A  G  ++ S+N      N   S+AP  +Y+TAR+      + 
Sbjct: 229 SGGLTRTWYNDAPYIFSAGLGVTLQASNNFRINYQNMPVSIAPADIYKTARSQGPNGDIN 288

Query: 294 KRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNF---DIFVQAGG 350
            + N++W F++D NF Y +RLHFCE    K NQ++F IYINNRTA+ +    DI    G 
Sbjct: 289 LKSNLTWMFQIDKNFTYILRLHFCEFQLSKINQKVFNIYINNRTAQADTTPADIIGWTGE 348

Query: 351 KNRGYHRDYFDAVSSKI--ETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLAS--- 405
           K    ++DY   V +    E + +Q+ P T       D+ LNGLEIFK     NLA    
Sbjct: 349 KGIPMYKDYAIYVDANNGGEEITLQMTPSTFGQPEYYDSSLNGLEIFKMDTMKNLAGPNP 408

Query: 406 ----VERFDSSGNPVGHSNKWILLVGIGAGIASVVVLAVIFALLFCYCKNWREKSSDPKN 461
               ++  +       +  +   ++G   G+ +V++ A+ F     Y K    +  D   
Sbjct: 409 EPSPMQAEEEVKKEFKNEKRHAFIIGSAGGVLAVLIGALCFT---AYKKKQGYQGGDSHT 465

Query: 462 NSPGWWPLFFHR---GTLNSTANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATNNFDES 518
           +S  W P++ +    GT ++ +    +G+     +  L R   RF+L EI+  T NFD+S
Sbjct: 466 SS--WLPIYGNSTTSGTKSTISGKSNNGSHLSNLAAGLCR---RFSLPEIKHGTQNFDDS 520

Query: 519 LMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
            +IGVGGFGKV+KG I+  T  A+K++NP SEQGL EFETEIE+LS+LRH+HLVSLIG+C
Sbjct: 521 NVIGVGGFGKVYKGVIDGTTKVAVKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYC 580

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
           DE  EM LVY+YMA GTLR HL+ +  P LTWK+RL+  IGAARGLHYLHTGA+  IIHR
Sbjct: 581 DEGGEMCLVYDYMAFGTLREHLYNTKKPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHR 640

Query: 639 DVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSD 698
           DVKTTNIL+DEN+VAK+SDFGLSKTGP+M   HV+T VKGSFGYLDPEYF RQQLTEKSD
Sbjct: 641 DVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSD 700

Query: 699 VYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLE 758
           VYSFGVVLFE++CAR  +NP+LPK+Q++L DWAM  +++ +L+ IIDP+LKG  + E L+
Sbjct: 701 VYSFGVVLFEILCARPALNPSLPKEQVSLGDWAMNCKRKGNLEDIIDPNLKGKINAECLK 760

Query: 759 KFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQ-NSFSSSQALG 812
           KF + AEKCL+D G  RPTMG+VLW+LE+ LQL E    T  R  N+  SS+ LG
Sbjct: 761 KFADTAEKCLNDSGLERPTMGDVLWNLEFALQLQETADGTRHRTPNNGGSSEDLG 815

Receptor-like protein kinase that controls pollen tube behavior by directing rupture at proper timing to release the sperm cell.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FLJ8|Y5613_ARATH Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1

 Score =  613 bits (1582), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 361/813 (44%), Positives = 483/813 (59%), Gaps = 64/813 (7%)

Query: 22  SKSFLINCGTNSSVNV-DGRKWVGD------LASNNNVTLSSSGIAATTDSLSGDSIYEP 74
           + ++LI+CG++    + DGR +  D      L ++ ++  S   I  T  + S      P
Sbjct: 31  ADNYLIDCGSSDETKLSDGRNFKSDQQSVAFLQTDEDIKTSVDSIPITDSNAST----LP 86

Query: 75  LYKTARVFADGLNYTFEII-AGNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSA 133
           LY TAR+FA    Y+F I   G + +RLHF P     YN+  S F V  +   LL +FSA
Sbjct: 87  LYLTARIFAGKSTYSFYISRPGRHWIRLHFYPLNHPLYNLTNSVFSVTTDTTVLLHDFSA 146

Query: 134 PGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVD 193
                          G++SSI + KEY +    +KL + F P KGS  FINA+EIV V D
Sbjct: 147 ---------------GDTSSI-VFKEYLI-YAAEKLSLYFKPHKGSTAFINAVEIVSVPD 189

Query: 194 KLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITAN 253
           +L  D+ + V        LS   +E ++R+N+GG  I P  DP L R W +D  Y     
Sbjct: 190 ELVPDSASSVPQAPDFKGLSSFSLEILHRINIGGDLISPKIDP-LSRTWLSDKPYNTFPE 248

Query: 254 AGSEIR-NSSNITYASTNDSS-VAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYF 311
               +  + S ITY     ++ +AP  VY TA  M++ +  +  FN+SW+  VD   DYF
Sbjct: 249 GSRNVTVDPSTITYPDGGATALIAPNPVYATAEEMADAQTSQPNFNLSWRMSVDFGHDYF 308

Query: 312 VRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDY-FDAVSSKIETL 370
           +RLHFC++V +  N  IF ++IN  +A +  D+          Y+ D+  +A +    ++
Sbjct: 309 IRLHFCDIVSKSLNDLIFNVFINKLSAISALDLSSLTSALGTAYYADFVLNASTITNGSI 368

Query: 371 WIQLGPDTAVGAAGTDALLNGLEIFKFSQN-GNLASVERFDSS-GNPVG-HSNKWILLVG 427
            +Q+GP   + +   +A+LNGLEI K +   G+L  +   D     P+G  S+K + + G
Sbjct: 369 LVQVGPTPNLQSGKPNAILNGLEIMKLNNAAGSLDGLFGVDGKYKGPIGGMSSKKLAIAG 428

Query: 428 IGAGIASVVVLAVIFALLFCYCKNWREKSSD-PKNNSPGWWPLFFHRGTLNSTANAKGSG 486
           IG  +A    L V+  L+      W+ +  D  K NS   W L  H  + +S  ++KG  
Sbjct: 429 IGFVMALTAFLGVVVLLV-----RWQRRPKDWQKQNSFSSWLLPLH-ASHSSYISSKGGS 482

Query: 487 TQYLKGSVALTRA--------------GKRFTLAEIRVATNNFDESLMIGVGGFGKVFKG 532
           T          ++              G+ F   E++ AT NFDE+ + GVGGFGKV+ G
Sbjct: 483 TSRRMSIFGSKKSKSNGFSSFFSNQGLGRYFPFTELQTATQNFDENAVCGVGGFGKVYIG 542

Query: 533 EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMA 592
           EI+  T  AIKR +  SEQG+ EF+TEI+MLSKLRHRHLVSLIGFCDE  EMILVYEYM+
Sbjct: 543 EIDGGTQVAIKRGSQSSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMS 602

Query: 593 NGTLRSHLFGSD------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL 646
           NG LR HL+GS       +P L+WKQRL+ CIG+ARGLHYLHTGA +GIIHRDVKTTNIL
Sbjct: 603 NGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNIL 662

Query: 647 LDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
           LDEN VAK+SDFGLSK  P M+  HVSTAVKGSFGYLDPEYF RQQLT+KSDVYSFGVVL
Sbjct: 663 LDENLVAKVSDFGLSKDAP-MDEGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVL 721

Query: 707 FEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEK 766
           FEV+CAR VINP LP++Q+NLA++AM   ++  L+ IIDP + G  S  SL KF E AEK
Sbjct: 722 FEVLCARPVINPQLPREQVNLAEYAMNLHRKGMLEKIIDPKIVGTISKGSLRKFVEAAEK 781

Query: 767 CLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD 799
           CL + G +RP MG+VLW+LEY LQL EA  + D
Sbjct: 782 CLAEYGVDRPGMGDVLWNLEYALQLQEASAQVD 814

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	851
297740842	844	unnamed protein product [Vitis vinifera]	0.987	0.995	0.747	0.0
359483690	850	PREDICTED: probable receptor-like protei	0.987	0.988	0.747	0.0
255564379	842	kinase, putative [Ricinus communis] gi|2	0.967	0.977	0.755	0.0
224056845	840	predicted protein [Populus trichocarpa]	0.972	0.985	0.724	0.0
224122340	836	predicted protein [Populus trichocarpa]	0.962	0.979	0.722	0.0
357448519	920	Kinase-like protein [Medicago truncatula	0.978	0.905	0.722	0.0
147818022	802	hypothetical protein VITISV_041657 [Viti	0.937	0.995	0.713	0.0
356532423	852	PREDICTED: probable receptor-like protei	0.965	0.964	0.716	0.0
15221443	849	hercules receptor kinase 2 [Arabidopsis	0.968	0.970	0.682	0.0
297845996	837	kinase family protein [Arabidopsis lyrat	0.934	0.949	0.680	0.0

>gi|297740842|emb|CBI31024.3| unnamed protein product [Vitis vinifera]

 Score = 1296 bits (3355), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/853 (74%), Positives = 723/853 (84%), Gaps = 13/853 (1%)

Query: 1   MERVLLFLVIML-VVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGI 59
           ME   L LV+M+ V    GEAQ+KS LINCGTNSSVNVDGR+WVGDLA +NN+TLSS G+
Sbjct: 1   MEVWGLILVVMVSVFVGNGEAQAKSLLINCGTNSSVNVDGRRWVGDLAPDNNLTLSSLGV 60

Query: 60  AATTDSLSGDSIYEPLYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFG 119
           AA+TD+ SGD+ +  LY+TAR+F D LNYT  +  GNY VRLHF PF FE YN N+SSF 
Sbjct: 61  AASTDTFSGDTTFAQLYETARIFPDSLNYTASLNQGNYSVRLHFYPFSFEKYNTNESSFS 120

Query: 120 VVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGS 179
           V ANGLKL S+ + PGEISH+N YLQSSG NSSS S++KEYFL VD   L+IEF P+KGS
Sbjct: 121 VTANGLKLASQLNVPGEISHKNSYLQSSGSNSSSFSMIKEYFLTVDSGLLVIEFAPTKGS 180

Query: 180 FGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLW 239
           FGFINAIEIVPVVD LF  +++KVGG +   NLSGRG+E MYRLNVGGPEI P +D DLW
Sbjct: 181 FGFINAIEIVPVVDNLFFSSVSKVGGTNSVLNLSGRGIEAMYRLNVGGPEITPDQDLDLW 240

Query: 240 RMWEADSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMS 299
           R W+ DSSYM TANAGSE+ NSSNITYAS NDS VAPL VYETAR+MSNTEVLEKRFNMS
Sbjct: 241 RTWDVDSSYMFTANAGSEVHNSSNITYASMNDSVVAPLAVYETARSMSNTEVLEKRFNMS 300

Query: 300 WKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDY 359
           WKFEVDP+F+Y +RLHFCEL YE+ANQR FRIYINNRTA +NFD+F++AGG N+ YH+D+
Sbjct: 301 WKFEVDPDFEYLIRLHFCELFYERANQRSFRIYINNRTAADNFDVFLRAGGMNKAYHQDF 360

Query: 360 FDAVSSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGH- 418
            D VSSKI TLWIQLGPDT VGA+GTDA+LNGLEIFK S+NGNLA VERFDS+ +  G  
Sbjct: 361 LDMVSSKINTLWIQLGPDTTVGASGTDAILNGLEIFKLSRNGNLAYVERFDSTKSSAGSK 420

Query: 419 -SNKWILLVGIGAGIASVVVLAVIFALLFCYCKNWREKSSDPKNNSPGWWPLFFHRGTLN 477
            S    L VG+GAG+AS+ ++AVIF+L+F +CK WR+KSS  KN SPGW PLF H   +N
Sbjct: 421 TSKTQTLWVGLGAGVASIAMMAVIFSLIFYFCKRWRKKSSATKNKSPGWRPLFLH---VN 477

Query: 478 STANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDC 537
           ST NAKG  +Q L  S+A  RAGKRFTL EIR ATNNFDESL+IGVGGFGKV+KGEI+D 
Sbjct: 478 ST-NAKGM-SQSLSVSLASNRAGKRFTLTEIRAATNNFDESLVIGVGGFGKVYKGEIDDG 535

Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T AAIKRANPQSEQGLAEF+TEIEMLSKLRHRHLVS+IGFC+EQNEMILVYEYMANGTLR
Sbjct: 536 TPAAIKRANPQSEQGLAEFQTEIEMLSKLRHRHLVSMIGFCEEQNEMILVYEYMANGTLR 595

Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           SHLFGS+LPPLTWKQRL+ACIGAARGLHYLHTGAERGIIHRDVKTTNIL+DENFVAKM+D
Sbjct: 596 SHLFGSELPPLTWKQRLEACIGAARGLHYLHTGAERGIIHRDVKTTNILIDENFVAKMAD 655

Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGLSKTGP+ EHTHVSTAVKGSFGYLDPEYF RQQLTEKSDVYSFGVVLFEVVCARAVIN
Sbjct: 656 FGLSKTGPAWEHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVIN 715

Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P+LP+DQINLA+WAM WQ QRSL++IIDPHLKGNYSP+SL KFGEIAEKCL DEGKNRPT
Sbjct: 716 PSLPRDQINLAEWAMHWQHQRSLETIIDPHLKGNYSPDSLRKFGEIAEKCLADEGKNRPT 775

Query: 778 MGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEFAEREAEDGQDAPTTDAENCLGLK 837
           MGEVLWHLEYVLQLHEAW+RT+  +NSFSSSQALG       E+G ++   D EN + LK
Sbjct: 776 MGEVLWHLEYVLQLHEAWLRTNVGENSFSSSQALGNL-----EEGLESAHLDEENEISLK 830

Query: 838 MTGEVESATMGIS 850
           M  + ESAT GI+
Sbjct: 831 MKQKRESATRGIN 843

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483690|ref|XP_002264211.2| PREDICTED: probable receptor-like protein kinase At1g30570-like [Vitis vinifera]

 Score = 1296 bits (3353), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/853 (74%), Positives = 723/853 (84%), Gaps = 13/853 (1%)

Query: 1   MERVLLFLVIML-VVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGI 59
           ME   L LV+M+ V    GEAQ+KS LINCGTNSSVNVDGR+WVGDLA +NN+TLSS G+
Sbjct: 7   MEVWGLILVVMVSVFVGNGEAQAKSLLINCGTNSSVNVDGRRWVGDLAPDNNLTLSSLGV 66

Query: 60  AATTDSLSGDSIYEPLYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFG 119
           AA+TD+ SGD+ +  LY+TAR+F D LNYT  +  GNY VRLHF PF FE YN N+SSF 
Sbjct: 67  AASTDTFSGDTTFAQLYETARIFPDSLNYTASLNQGNYSVRLHFYPFSFEKYNTNESSFS 126

Query: 120 VVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGS 179
           V ANGLKL S+ + PGEISH+N YLQSSG NSSS S++KEYFL VD   L+IEF P+KGS
Sbjct: 127 VTANGLKLASQLNVPGEISHKNSYLQSSGSNSSSFSMIKEYFLTVDSGLLVIEFAPTKGS 186

Query: 180 FGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLW 239
           FGFINAIEIVPVVD LF  +++KVGG +   NLSGRG+E MYRLNVGGPEI P +D DLW
Sbjct: 187 FGFINAIEIVPVVDNLFFSSVSKVGGTNSVLNLSGRGIEAMYRLNVGGPEITPDQDLDLW 246

Query: 240 RMWEADSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMS 299
           R W+ DSSYM TANAGSE+ NSSNITYAS NDS VAPL VYETAR+MSNTEVLEKRFNMS
Sbjct: 247 RTWDVDSSYMFTANAGSEVHNSSNITYASMNDSVVAPLAVYETARSMSNTEVLEKRFNMS 306

Query: 300 WKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDY 359
           WKFEVDP+F+Y +RLHFCEL YE+ANQR FRIYINNRTA +NFD+F++AGG N+ YH+D+
Sbjct: 307 WKFEVDPDFEYLIRLHFCELFYERANQRSFRIYINNRTAADNFDVFLRAGGMNKAYHQDF 366

Query: 360 FDAVSSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGH- 418
            D VSSKI TLWIQLGPDT VGA+GTDA+LNGLEIFK S+NGNLA VERFDS+ +  G  
Sbjct: 367 LDMVSSKINTLWIQLGPDTTVGASGTDAILNGLEIFKLSRNGNLAYVERFDSTKSSAGSK 426

Query: 419 -SNKWILLVGIGAGIASVVVLAVIFALLFCYCKNWREKSSDPKNNSPGWWPLFFHRGTLN 477
            S    L VG+GAG+AS+ ++AVIF+L+F +CK WR+KSS  KN SPGW PLF H   +N
Sbjct: 427 TSKTQTLWVGLGAGVASIAMMAVIFSLIFYFCKRWRKKSSATKNKSPGWRPLFLH---VN 483

Query: 478 STANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDC 537
           ST NAKG  +Q L  S+A  RAGKRFTL EIR ATNNFDESL+IGVGGFGKV+KGEI+D 
Sbjct: 484 ST-NAKGM-SQSLSVSLASNRAGKRFTLTEIRAATNNFDESLVIGVGGFGKVYKGEIDDG 541

Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T AAIKRANPQSEQGLAEF+TEIEMLSKLRHRHLVS+IGFC+EQNEMILVYEYMANGTLR
Sbjct: 542 TPAAIKRANPQSEQGLAEFQTEIEMLSKLRHRHLVSMIGFCEEQNEMILVYEYMANGTLR 601

Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           SHLFGS+LPPLTWKQRL+ACIGAARGLHYLHTGAERGIIHRDVKTTNIL+DENFVAKM+D
Sbjct: 602 SHLFGSELPPLTWKQRLEACIGAARGLHYLHTGAERGIIHRDVKTTNILIDENFVAKMAD 661

Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGLSKTGP+ EHTHVSTAVKGSFGYLDPEYF RQQLTEKSDVYSFGVVLFEVVCARAVIN
Sbjct: 662 FGLSKTGPAWEHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVIN 721

Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P+LP+DQINLA+WAM WQ QRSL++IIDPHLKGNYSP+SL KFGEIAEKCL DEGKNRPT
Sbjct: 722 PSLPRDQINLAEWAMHWQHQRSLETIIDPHLKGNYSPDSLRKFGEIAEKCLADEGKNRPT 781

Query: 778 MGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEFAEREAEDGQDAPTTDAENCLGLK 837
           MGEVLWHLEYVLQLHEAW+RT+  +NSFSSSQALG       E+G ++   D EN + LK
Sbjct: 782 MGEVLWHLEYVLQLHEAWLRTNVGENSFSSSQALGNL-----EEGLESAHLDEENEISLK 836

Query: 838 MTGEVESATMGIS 850
           M  + ESAT GI+
Sbjct: 837 MKQKRESATRGIN 849

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255564379|ref|XP_002523186.1| kinase, putative [Ricinus communis] gi|223537593|gb|EEF39217.1| kinase, putative [Ricinus communis]

 Score = 1295 bits (3351), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/827 (75%), Positives = 710/827 (85%), Gaps = 4/827 (0%)

Query: 5   LLFLVIMLVVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGIAATTD 64
           L+ LV + +    GEAQS+SFLINCGT  SV VDGR+W+GDL  NNNVTL SS ++ATT 
Sbjct: 12  LVLLVTIFISFNSGEAQSQSFLINCGTTISVTVDGRRWIGDLVPNNNVTLDSSTVSATTS 71

Query: 65  SLSGDSIYEPLYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFGVVANG 124
           + +GDSI+ PLY+TAR+F+D LNYTF+ + GNY VRLHFCPFPFE+ NVN+SSF + ANG
Sbjct: 72  AATGDSIFGPLYQTARIFSDALNYTFKGMQGNYFVRLHFCPFPFENNNVNESSFSLRANG 131

Query: 125 LKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFIN 184
           LKL+SEF+ PGEISH+NLY+Q S  NSSS+ LV+EY L  DLD L++EFIPSKGSFGFIN
Sbjct: 132 LKLVSEFNVPGEISHKNLYVQGSSSNSSSLFLVREYML-FDLDALLLEFIPSKGSFGFIN 190

Query: 185 AIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEA 244
           AIE+V V D+LF D++++VGGN+VN NLSGRG++TMYRLNVGGPEIK ++D D WRMWE 
Sbjct: 191 AIEVVSVADRLFQDSVSRVGGNEVNLNLSGRGIQTMYRLNVGGPEIKSNQDSDFWRMWEV 250

Query: 245 DSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEV 304
           DSSYMIT NAGS I NSSNITYAS NDSSVAPLLVYETAR MSNTEVLEKRFNMSWKFEV
Sbjct: 251 DSSYMITENAGSVINNSSNITYASKNDSSVAPLLVYETARAMSNTEVLEKRFNMSWKFEV 310

Query: 305 DPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVS 364
           DP+FDY VRLHFCEL Y+KANQRIFRIYINNRTA +NFD+ V+AGG NRGYH+DYFDAVS
Sbjct: 311 DPDFDYLVRLHFCELQYDKANQRIFRIYINNRTAADNFDVNVRAGGANRGYHQDYFDAVS 370

Query: 365 SKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGHSNKWIL 424
           SKI+TLWIQLGPDTA GA+GTDALLNGLEIFK S+NGNLA VERFDS+GN V  S   +L
Sbjct: 371 SKIDTLWIQLGPDTAAGASGTDALLNGLEIFKLSRNGNLAHVERFDSTGNRVRKSKYQML 430

Query: 425 LVGIGAGIASVVVLAVIFALLFCYCKNWREKSSDPKNNSPGWWPLFFHRGTLNSTANAKG 484
            VGIGAG+ASV+VLA I   + C+C+  R++SSD K N  GW PLF H   ++S  NAKG
Sbjct: 431 WVGIGAGVASVLVLAAICIFILCFCRTHRKESSDTKENVTGWRPLFLHGAIVSSIGNAKG 490

Query: 485 SGTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKR 544
            G+Q   GS    R GKRFTLAEIR AT +FD+SL+IG+GGFGKV+KGE+E  TLAAIKR
Sbjct: 491 -GSQSSHGSTV--RIGKRFTLAEIRTATKSFDDSLVIGIGGFGKVYKGELEYGTLAAIKR 547

Query: 545 ANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSD 604
           ANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC+EQNEMILVYEYM NGTLRSHLFGSD
Sbjct: 548 ANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEQNEMILVYEYMGNGTLRSHLFGSD 607

Query: 605 LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG 664
           LPPLTWKQRL+ACIGAARGLHYLHTGA+RGIIHRDVKTTNILLDENFVAKMSDFGLSKTG
Sbjct: 608 LPPLTWKQRLEACIGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKMSDFGLSKTG 667

Query: 665 PSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ 724
           P+ +HTHVSTAVKGSFGYLDPEYF RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ
Sbjct: 668 PAWDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ 727

Query: 725 INLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
           INLA+WAM+WQ+QRSL++IIDP +KG Y PESL KFGEIAEKCL D+GKNRPTMGE+LWH
Sbjct: 728 INLAEWAMRWQRQRSLETIIDPRMKGTYCPESLTKFGEIAEKCLADDGKNRPTMGEILWH 787

Query: 785 LEYVLQLHEAWMRTDDRQNSFSSSQALGEFAEREAEDGQDAPTTDAE 831
           LEYVLQLHEAW+  +  +NS SSSQA+ +  ER  E  Q   + + E
Sbjct: 788 LEYVLQLHEAWVCANVTENSLSSSQAMEDVEERVQEKVQGQESINEE 834

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056845|ref|XP_002299052.1| predicted protein [Populus trichocarpa] gi|222846310|gb|EEE83857.1| predicted protein [Populus trichocarpa]

 Score = 1256 bits (3251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/837 (72%), Positives = 711/837 (84%), Gaps = 9/837 (1%)

Query: 5   LLFLVIMLVVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGIAATTD 64
           ++FLVI+ +    GEAQS+SFL+NCG NSSVNVDGR+W+GDL  N+N T+SS G+AAT  
Sbjct: 12  VVFLVIVFLSVSSGEAQSRSFLVNCGANSSVNVDGRRWIGDLVPNDNFTVSSPGVAATDS 71

Query: 65  SLSGDSIYEPLYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFGVVANG 124
           + +GDS    LY+TAR+F +GLNYTF  + GNY VRLHFCPFP E++NVN+S F VVANG
Sbjct: 72  TANGDS----LYRTARIFDNGLNYTFSGVQGNYFVRLHFCPFPIENHNVNESLFSVVANG 127

Query: 125 LKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFIN 184
           LKLL++F+ PGEIS + L LQ+S  NSSS+SLVKEY L ++ D L++EFIPSKGSFGFIN
Sbjct: 128 LKLLADFNVPGEISDKYLPLQNSNSNSSSLSLVKEYILAIN-DVLVVEFIPSKGSFGFIN 186

Query: 185 AIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEA 244
           A+EIVPV+  LFAD + +VGG+D N  +SGRG+ETMYRLNVGG EIKP +D DLWR WE 
Sbjct: 187 AMEIVPVIGTLFADLVRRVGGSDAN--VSGRGIETMYRLNVGGQEIKPDQDSDLWRKWEV 244

Query: 245 DSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEV 304
           DSSYMITA+AG EI+NSSN+TYAS NDSSVAPLLVYETAR MSNTEVLEK+FNMSWKFEV
Sbjct: 245 DSSYMITADAGVEIKNSSNVTYASNNDSSVAPLLVYETARIMSNTEVLEKKFNMSWKFEV 304

Query: 305 DPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVS 364
           DP+FDY +RLHFCELVY+KANQRIF++YINN+TA +NFD++ ++GGKN  YH+DYFDA+S
Sbjct: 305 DPDFDYLIRLHFCELVYDKANQRIFKVYINNKTAADNFDVYARSGGKNIAYHQDYFDAIS 364

Query: 365 SKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGHSNKWIL 424
           +KI TLWIQLGPDTAVGA GTDALLNGLEIFK S++GNLA  +R   +G    H   WIL
Sbjct: 365 AKINTLWIQLGPDTAVGAWGTDALLNGLEIFKLSRSGNLAYGDRIGPTGKSASHLKSWIL 424

Query: 425 LVGIGAGIASVVVLAVIFALLFCYCKNWREKSSDPKNNSPGWWPLFFHRGTLNSTANAKG 484
            +GIGAG+AS +++A+    +FC+CK+ R + S+ K+N PGW PLF H   L+S ANAKG
Sbjct: 425 WLGIGAGVASALIIAIACTCIFCFCKSQRNEMSNTKDNPPGWRPLFMHGAVLSSIANAKG 484

Query: 485 SGTQYLKGSVA-LTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIK 543
            G Q L GSVA  TR G+RFTL+EIR AT+NFD+SL+IGVGGFGKV+KGEIED TLAAIK
Sbjct: 485 -GAQTLNGSVAAFTRVGRRFTLSEIRAATDNFDDSLVIGVGGFGKVYKGEIEDGTLAAIK 543

Query: 544 RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGS 603
           R+NPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE+MANGTLRSHLFGS
Sbjct: 544 RSNPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEFMANGTLRSHLFGS 603

Query: 604 DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT 663
             PPLTWKQRL+AC GAARGLHYLHTGA+RGIIHRDVKTTNILLDENFVAKM+DFGLSK 
Sbjct: 604 GFPPLTWKQRLEACTGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKMADFGLSKD 663

Query: 664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
           GP+++HTHVSTAVKGSFGYLDPEYF RQ LTEKSDVYSFGVVLFEVVC+R VINP+LPKD
Sbjct: 664 GPALDHTHVSTAVKGSFGYLDPEYFRRQHLTEKSDVYSFGVVLFEVVCSRPVINPSLPKD 723

Query: 724 QINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLW 783
           QINLA+WAMKWQ+QRSL++IIDP L+GN  PESL+KFGEIAEKCL DEG+NRPTMGEVLW
Sbjct: 724 QINLAEWAMKWQRQRSLETIIDPRLRGNSCPESLKKFGEIAEKCLADEGRNRPTMGEVLW 783

Query: 784 HLEYVLQLHEAWMRTDDRQNSFSSSQALGEFAEREAEDGQDAPTTDAENCLGLKMTG 840
           HLEYVLQLHEAWMRT+  + S +SSQAL +   R AED Q  P++  E+ +  +  G
Sbjct: 784 HLEYVLQLHEAWMRTNATETSITSSQALEDLELRVAEDAQRRPSSLDEDTVRPRHEG 840

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122340|ref|XP_002330599.1| predicted protein [Populus trichocarpa] gi|222872157|gb|EEF09288.1| predicted protein [Populus trichocarpa]

 Score = 1249 bits (3233), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/824 (72%), Positives = 709/824 (86%), Gaps = 5/824 (0%)

Query: 5   LLFLVIMLVVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGIAATTD 64
           L+FL+++ +     EAQSK  L+NCG NSSVNVDGR+W+GDLA N+N T+SS G+AAT  
Sbjct: 12  LVFLIMVFLSVSSREAQSKPVLVNCGANSSVNVDGRRWIGDLAPNDNFTVSSPGVAATDS 71

Query: 65  SLSGDSIYEPLYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFGVVANG 124
           +  G+S   PLYKTAR+F + LNYTF  + GNY +RLHFCPFPFE+YNVN+SSF VVANG
Sbjct: 72  NADGNSTLGPLYKTARIF-NALNYTFAGMQGNYFLRLHFCPFPFENYNVNESSFSVVANG 130

Query: 125 LKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFIN 184
           LKL++EF+ P EIS +NL+LQ+S  NSSS+SLVKEY L ++ D L++EF+ S+GSFGFIN
Sbjct: 131 LKLMTEFNVPVEISDKNLHLQNSNSNSSSLSLVKEYILTIN-DVLVVEFVSSRGSFGFIN 189

Query: 185 AIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEA 244
           AIE+VPVV  LFAD+++KVGG++ NFN+SGRG+ETMYRLN+GG EIK ++D DLWR WE 
Sbjct: 190 AIEVVPVVGTLFADSVSKVGGSNANFNVSGRGIETMYRLNIGGQEIKTNQDSDLWRKWEM 249

Query: 245 DSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEV 304
           DSSYMITA+AG EIRN+SN+TYAS NDSSVAPLLVYETAR MSNTEVLEK+FNMSWKFEV
Sbjct: 250 DSSYMITADAGVEIRNTSNVTYASNNDSSVAPLLVYETARIMSNTEVLEKKFNMSWKFEV 309

Query: 305 DPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVS 364
           DP+FDY +RLHFCELVY+KANQRIFR+YINN+TA ++FD++V+AGGKN  YH+DYFD VS
Sbjct: 310 DPDFDYLIRLHFCELVYDKANQRIFRVYINNKTAADSFDVYVRAGGKNIAYHQDYFDTVS 369

Query: 365 SKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGHSNKWIL 424
           SK  TLW+QLGPDTAVGA+GTDALLNGLEIFK S++ NLA  +R DS+     HS  WIL
Sbjct: 370 SKTNTLWVQLGPDTAVGASGTDALLNGLEIFKLSRSANLAYADRIDSTEKSGSHSKSWIL 429

Query: 425 LVGIGAGIASVVVLAVIFALLFCYCKNWREKSSDPKNNSPGWWPLFFHRGTLNSTANAKG 484
            +G+GAG+ASV+++A+ F  +FC+ KN R++ SD K+N PGW PLF H   ++S AN KG
Sbjct: 430 WLGVGAGVASVLIIAITFTCIFCFGKNRRKQMSDAKDNPPGWRPLFMHGAVVSSIANNKG 489

Query: 485 SGTQYLKGSVAL-TRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIK 543
            G + L GS+A  TR G+RFTL+EIR ATNNFD+SL+IGVGGFGKV+ G+IED TLAAIK
Sbjct: 490 -GVRSLNGSLAASTRVGRRFTLSEIRAATNNFDDSLVIGVGGFGKVYSGKIEDGTLAAIK 548

Query: 544 RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGS 603
           R+NPQS+QGL EFETEIEMLSKLRHRHLVSLIGFC+EQNEMILVYEYMANGTLRSHLFGS
Sbjct: 549 RSNPQSKQGLTEFETEIEMLSKLRHRHLVSLIGFCEEQNEMILVYEYMANGTLRSHLFGS 608

Query: 604 DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT 663
           D PPLTWKQRL+ACIGAARGLHYLHTGA+RGIIHRD+KTTNILLDENFVAKM+DFGLSK 
Sbjct: 609 DFPPLTWKQRLEACIGAARGLHYLHTGADRGIIHRDIKTTNILLDENFVAKMADFGLSKA 668

Query: 664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
           GP+++HTHVSTAVKGSFGYLDPEY+ RQQLTEKSDVYSFGVVLFEVVC+R VINP+LPKD
Sbjct: 669 GPALDHTHVSTAVKGSFGYLDPEYYRRQQLTEKSDVYSFGVVLFEVVCSRPVINPSLPKD 728

Query: 724 QINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLW 783
           QINLA+WAMKWQ+Q+SL++I+DP L+GN  PESL+KFGEIAEKCL DEGKNRPTMGEVLW
Sbjct: 729 QINLAEWAMKWQRQKSLETIVDPRLRGNTCPESLKKFGEIAEKCLADEGKNRPTMGEVLW 788

Query: 784 HLEYVLQLHEAWMRTD-DRQNSFSSSQALGEFAEREAEDGQDAP 826
           HLE+VLQLHEAWMR +   + S +SSQAL +   R AE+ +  P
Sbjct: 789 HLEFVLQLHEAWMRANATTETSITSSQALEDLELRVAEEARRPP 832

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357448519|ref|XP_003594535.1| Kinase-like protein [Medicago truncatula] gi|355483583|gb|AES64786.1| Kinase-like protein [Medicago truncatula]

 Score = 1236 bits (3198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/840 (72%), Positives = 708/840 (84%), Gaps = 7/840 (0%)

Query: 5   LLFLVIMLVVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSS-GIAATT 63
           LLF++I++ V++  EAQ KS LINCG+NSSVNVDGRKW+GD+A NNNVTLSSS G+ A+T
Sbjct: 9   LLFVLILMFVSKNVEAQQKSILINCGSNSSVNVDGRKWIGDMAPNNNVTLSSSPGVVAST 68

Query: 64  DSLSGDSIYEPLYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFGVVAN 123
           D LSG+SIYEPLYKTAR+F   LNYT + + GNY VR H CPF   D+NVN+SSFGVV N
Sbjct: 69  DGLSGNSIYEPLYKTARIFTASLNYTIKDVHGNYFVRFHLCPFEIVDHNVNESSFGVVVN 128

Query: 124 GLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFI 183
           G+KLLSEF+ PG+IS +N+ LQ+SG NSSS  L++EY L V+   L+IEF+PS  SFGFI
Sbjct: 129 GMKLLSEFNVPGKISEKNVNLQNSGKNSSSFFLIREYILDVNDGMLLIEFLPSGNSFGFI 188

Query: 184 NAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWE 243
           NAIEIVPVV +LF  ++ KVGG   N NL+G G+ETMYRLNVGGPEI+ ++DPDL R+WE
Sbjct: 189 NAIEIVPVVGELFDGSVGKVGGG--NLNLTGHGMETMYRLNVGGPEIQSNQDPDLRRIWE 246

Query: 244 ADSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFE 303
            DSSYM+T NAG+ I++SSNITYAS ND+SVAPLLVYETAR MSNTEVL+KRFNMSWKFE
Sbjct: 247 VDSSYMVTENAGAAIKSSSNITYASANDTSVAPLLVYETARAMSNTEVLDKRFNMSWKFE 306

Query: 304 VDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAV 363
           VDP+FDY VRLHFCEL+Y+K+N+RIFRIYINNRTA +N D+FV+AGGKN+ YH+D++D+ 
Sbjct: 307 VDPDFDYVVRLHFCELMYDKSNERIFRIYINNRTAADNVDVFVRAGGKNKAYHQDHYDSA 366

Query: 364 SSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGHSNKWI 423
           S +++TLW+QLGPDTA GAAGTDALLNGLEIFK S+NGNLA VE+FD +G     S   +
Sbjct: 367 SLRMDTLWVQLGPDTAAGAAGTDALLNGLEIFKLSRNGNLAYVEKFDLAGKSGSSSKAKV 426

Query: 424 LLVGIGAGIASVVVLAVIFALLFCYCKNWREKSSDPKNNSPGWWPLFFHRGT-LNSTANA 482
           L +G+GAGIASV ++A +   +FC+CK  R++SSD KNNSPGW P+F + G  +NST  A
Sbjct: 427 LWIGVGAGIASVAIVACVGVFVFCFCKRRRKESSDTKNNSPGWRPIFLYGGAAVNSTVGA 486

Query: 483 KGS-GTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAA 541
           KGS G Q L G+V  T AGKRFTLAEI  ATNNFD+SL+IGVGGFGKV+KGE++D   AA
Sbjct: 487 KGSTGNQKLYGTVTSTGAGKRFTLAEINAATNNFDDSLVIGVGGFGKVYKGEVDDGVPAA 546

Query: 542 IKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLF 601
           IKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC+E++EMILVYEYMANGTLRSHLF
Sbjct: 547 IKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEKSEMILVYEYMANGTLRSHLF 606

Query: 602 GSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS 661
           GSDLPPLTWKQRL+ACIGAARGLHYLHTGA+RGIIHRDVKTTNILLDENFVAKM+DFGLS
Sbjct: 607 GSDLPPLTWKQRLEACIGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKMADFGLS 666

Query: 662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP 721
           K GP+ EHTHVSTAVKGSFGYLDPEYF RQQLTEKSDVYSFGVVLFE VCARAVINPTLP
Sbjct: 667 KDGPAFEHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLP 726

Query: 722 KDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEV 781
           KDQINLA+WAM+WQK+RSL+ IIDP L GN+ PESL KFGEIAEKCL D+GK+RPTMGEV
Sbjct: 727 KDQINLAEWAMRWQKERSLEKIIDPRLNGNHCPESLSKFGEIAEKCLADDGKSRPTMGEV 786

Query: 782 LWHLEYVLQLHEAWMRTDDR--QNSFSSSQALGEFAEREAEDGQDAPTTDAENCLGLKMT 839
           LWHLEYVLQLHEAW+  D+   +NSFS SQAL    +   E  Q+    D E  L  K T
Sbjct: 787 LWHLEYVLQLHEAWLNRDNNSTENSFSGSQALSGLNDGRVEVAQEHSNQDEEVDLDSKNT 846

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147818022|emb|CAN73534.1| hypothetical protein VITISV_041657 [Vitis vinifera]

 Score = 1212 bits (3137), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/853 (71%), Positives = 688/853 (80%), Gaps = 55/853 (6%)

Query: 1   MERVLLFLVIML-VVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGI 59
           ME   L LV+M+ V    GEAQ+KS LINCGTNSSVNVD                     
Sbjct: 1   MEVWGLILVVMVSVFVGNGEAQAKSLLINCGTNSSVNVD--------------------- 39

Query: 60  AATTDSLSGDSIYEPLYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFG 119
               D+ SGD+ +  LY+TAR+F D LNYT  +  GNY VRLHF PF FE YN N+SSF 
Sbjct: 40  ----DTFSGDTTFAQLYETARIFPDSLNYTASLNQGNYSVRLHFYPFSFEKYNTNESSFS 95

Query: 120 VVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGS 179
                            ISH+N YLQSSG NSSS S++KEYFL VD   L+IEF P+KGS
Sbjct: 96  -----------------ISHKNSYLQSSGSNSSSXSMIKEYFLTVDSGLLVIEFAPTKGS 138

Query: 180 FGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLW 239
           FGFINAIEIVPVVD LF  +++KVGG +   NLSGRG+E MYRLNVGGPEI P +D DLW
Sbjct: 139 FGFINAIEIVPVVDNLFFSSVSKVGGTNSVLNLSGRGIEAMYRLNVGGPEITPDQDLDLW 198

Query: 240 RMWEADSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMS 299
           R WE DSSYM TANAGSE+ NSSNITYAS NDS VAPL VYETAR+MSNTEVLEKRFNMS
Sbjct: 199 RTWEVDSSYMFTANAGSEVHNSSNITYASMNDSVVAPLAVYETARSMSNTEVLEKRFNMS 258

Query: 300 WKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDY 359
           WKFEVDP+F+Y +RLHFCEL YE+ANQR FRIYINNRTA +NFD+F++AGG N+ YH+D+
Sbjct: 259 WKFEVDPDFEYLIRLHFCELFYERANQRSFRIYINNRTAADNFDVFLRAGGMNKAYHQDF 318

Query: 360 FDAVSSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGH- 418
            D VSSKI TLWIQLGPDT VGA+GTDA+LNGLEIFK S+NGNLA VERFDS+ +  G  
Sbjct: 319 LDMVSSKINTLWIQLGPDTTVGASGTDAILNGLEIFKLSRNGNLAYVERFDSTKSSAGSK 378

Query: 419 -SNKWILLVGIGAGIASVVVLAVIFALLFCYCKNWREKSSDPKNNSPGWWPLFFHRGTLN 477
            S    L VG+GAG+AS+ ++AVIF+L+F +CK WR+KSS  KN SPGW PLF H   +N
Sbjct: 379 TSKTQTLWVGLGAGVASIAMMAVIFSLIFYFCKRWRKKSSATKNKSPGWRPLFLH---VN 435

Query: 478 STANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDC 537
           ST NAKG  +Q L  S+A  RAGKRFTL EIR ATNNFDESL+IGVGGFGKV+KGEI+D 
Sbjct: 436 ST-NAKGM-SQSLSVSLAXNRAGKRFTLTEIRAATNNFDESLVIGVGGFGKVYKGEIDDG 493

Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T AAIKRANPQSEQGLAEF+TEIEMLSKLRHRHLVS+IGFC+EQNEMILVYEYMANGTLR
Sbjct: 494 TPAAIKRANPQSEQGLAEFQTEIEMLSKLRHRHLVSMIGFCEEQNEMILVYEYMANGTLR 553

Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           SHLFGS+LPPLTWKQRL+ACIGAARGLHYLHTGAERGIIHRDVKTTNIL+D+NFVAKM+D
Sbjct: 554 SHLFGSELPPLTWKQRLEACIGAARGLHYLHTGAERGIIHRDVKTTNILIDDNFVAKMAD 613

Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGLSKTGP+ EHTHVSTAVKGSFGYLDPEYF RQQLTEKSDVYSFGVVLFEVVCARAVIN
Sbjct: 614 FGLSKTGPAWEHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVIN 673

Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           PTLP+DQINLA+WAM WQ+QRSL++IIDPHLKGNYSP+SL KFGEIAEKCL DEGKNRPT
Sbjct: 674 PTLPRDQINLAEWAMHWQQQRSLETIIDPHLKGNYSPDSLRKFGEIAEKCLADEGKNRPT 733

Query: 778 MGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEFAEREAEDGQDAPTTDAENCLGLK 837
           MGEVLWHLEYVLQLHEAW+RT+  +NSFSSSQALG       E+G ++   D EN + LK
Sbjct: 734 MGEVLWHLEYVLQLHEAWLRTNVGENSFSSSQALGNL-----EEGLESAHXDEENEISLK 788

Query: 838 MTGEVESATMGIS 850
           M  + +SAT GI+
Sbjct: 789 MKQKRDSATRGIN 801

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532423|ref|XP_003534772.1| PREDICTED: probable receptor-like protein kinase At1g30570-like [Glycine max]

 Score = 1188 bits (3073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 590/824 (71%), Positives = 687/824 (83%), Gaps = 2/824 (0%)

Query: 20  AQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGIAATTDSLSGDSIYEPLYKTA 79
            Q KS L+NCG++SSVNVDGR+WVGD+A++NNVTLSS  +  +T + SG SIY+ LYKTA
Sbjct: 27  GQPKSILLNCGSDSSVNVDGRRWVGDMATDNNVTLSSPSVVVSTSTSSGSSIYDSLYKTA 86

Query: 80  RVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGEISH 139
           R+F   LNYTF+ + GNY VR HFCPF  +DYNVN+SSFGVV N LKLLSEF  PG+ISH
Sbjct: 87  RIFNSPLNYTFKDVQGNYFVRFHFCPFETDDYNVNESSFGVVVNSLKLLSEFDVPGKISH 146

Query: 140 RNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKLFADT 199
           +N+ L +SG N+SS+ LVKEY + V+ D L+IEF+P++ SFGFINAIEIVPV  +LFA +
Sbjct: 147 KNMNLLNSGRNASSLFLVKEYIVAVNGDMLLIEFVPTRSSFGFINAIEIVPVAGELFAGS 206

Query: 200 INKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAGSEIR 259
           +++VGG+  N NL GRG+ETMYRLNVGGPEI+ ++D DLWR WE DS YMIT NAGS I+
Sbjct: 207 VSRVGGSGGNMNLPGRGMETMYRLNVGGPEIQSNQDHDLWRTWEVDSGYMITENAGSGIK 266

Query: 260 NSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCEL 319
           NSSNITYAS ND++VAPLLVYETAR MSNTEVL+KRFNMSWKFEVDP+FDY VRLHFCEL
Sbjct: 267 NSSNITYASVNDTAVAPLLVYETARAMSNTEVLDKRFNMSWKFEVDPDFDYLVRLHFCEL 326

Query: 320 VYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQLGPDTA 379
           VY+KAN+RIFRIYINN+TA +N D+FV+AGG N+ YH+DYFD VS +I+T+W+QLGPDTA
Sbjct: 327 VYDKANERIFRIYINNKTAADNVDVFVRAGGMNKAYHQDYFDPVSPRIDTVWVQLGPDTA 386

Query: 380 VGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGHSNKWILLVGIGAGIASVVVLA 439
            GAAGTDALLNGLE+FK S+NGNLA VERFD  GN    S    + VG+GAG+ASV ++A
Sbjct: 387 AGAAGTDALLNGLEVFKLSRNGNLAYVERFDLGGNSGNKSKARAIWVGVGAGVASVAIVA 446

Query: 440 VIFALLFCYCKNWREKSSDPKNNSPGWWPLFFHRG-TLNSTANAKGS-GTQYLKGSVALT 497
           +I  L+FC+C   +++SSD KNN  GW PLF + G  +NST  AKGS GTQ   GSV  T
Sbjct: 447 LIVGLVFCFCNGRKKQSSDTKNNPQGWRPLFLYGGAAVNSTVGAKGSAGTQKPYGSVGST 506

Query: 498 RAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFE 557
           R GK+FTLAEI  ATNNFD+SL+IGVGGFGKV+KGE+ED    AIKRANPQSEQGLAEFE
Sbjct: 507 RVGKKFTLAEINAATNNFDDSLVIGVGGFGKVYKGEVEDGVPVAIKRANPQSEQGLAEFE 566

Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           TEIEMLSKLRHRHLVSLIGFC+E+NEMILVYEYMANGTLRSHLFGSDLPPL+WKQRL+ C
Sbjct: 567 TEIEMLSKLRHRHLVSLIGFCEEKNEMILVYEYMANGTLRSHLFGSDLPPLSWKQRLEVC 626

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           IGAARGLHYLHTGA+RGIIHRDVKTTNILLDENFVAKM+DFGLSK GP+ EHTHVSTAVK
Sbjct: 627 IGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKMADFGLSKDGPAFEHTHVSTAVK 686

Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ 737
           GSFGYLDPEYF RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLA+WAM+WQ+Q
Sbjct: 687 GSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAEWAMRWQRQ 746

Query: 738 RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMR 797
           RSL++IID  L+GNY PESL K+GEIAEKCL D+GK+RPTMGEVLWHLEYVLQLHEAW+ 
Sbjct: 747 RSLETIIDSLLRGNYCPESLAKYGEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHEAWLN 806

Query: 798 TDDRQNSFSSSQALGEFAEREAEDGQDAPTTDAENCLGLKMTGE 841
               + SFS+  AL    +   E   +  + D E     K T E
Sbjct: 807 MGTTETSFSNDHALRGPKDGGLEMVHEPSSQDEEVGFDHKHTAE 850

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15221443|ref|NP_174345.1| hercules receptor kinase 2 [Arabidopsis thaliana] gi|75336895|sp|Q9SA72.1|Y1357_ARATH RecName: Full=Probable receptor-like protein kinase At1g30570; Flags: Precursor gi|4587513|gb|AAD25744.1|AC007060_2 Contains eukaryotic protein kinase domain PF|00069 [Arabidopsis thaliana] gi|332193124|gb|AEE31245.1| hercules receptor kinase 2 [Arabidopsis thaliana]

 Score = 1170 bits (3026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 569/834 (68%), Positives = 670/834 (80%), Gaps = 10/834 (1%)

Query: 1   MERVLLFLVIMLVVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGIA 60
           +E +L  L+    V   GEAQSKSFL++CG+N++  VDGR WVGDL+ N +VTL   G  
Sbjct: 9   LEHLLCVLIFFTYVIGYGEAQSKSFLVDCGSNATTEVDGRTWVGDLSPNKSVTLQ--GFD 66

Query: 61  ATTDSLS-GDSIYEPLYKTARVFADGLNYTFE-IIAGNYIVRLHFCPFPFEDYNVNKSSF 118
           A T S S G S+Y  +YKTARVF   LNYTFE I  GNY VRLHF PF  E++NVN+SSF
Sbjct: 67  AITASTSKGSSVYAEIYKTARVFDAVLNYTFEGITQGNYFVRLHFSPFAIENHNVNESSF 126

Query: 119 GVVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKG 178
            V A+GL+L+ + +  GEI+H+NL L+S+G N+++ SLVKE+ L     KL++ FIP KG
Sbjct: 127 SVFADGLRLMLDINIAGEIAHKNLILESTGHNATASSLVKEFLLPTGPGKLVLSFIPEKG 186

Query: 179 SFGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDL 238
           SFGF+NAIEIV V DKLF +++ KVGG++V   L GRG+ETMYRLNVGGP++ PS+D  L
Sbjct: 187 SFGFVNAIEIVSVDDKLFKESVTKVGGSEVELGLGGRGIETMYRLNVGGPKLGPSKDLKL 246

Query: 239 WRMWEADSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNM 298
           +R WE D SYM+  NAG E++NSSNITYA  +DS VAPLLVYETAR MSNTEVLEKRFN+
Sbjct: 247 YRTWETDLSYMVIENAGVEVKNSSNITYALADDSPVAPLLVYETARMMSNTEVLEKRFNI 306

Query: 299 SWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRD 358
           SWKFEVDPNFDY VRLHFCEL+ +K NQRIFRIYINN+TA  NFDIF  AGGKN+G ++D
Sbjct: 307 SWKFEVDPNFDYLVRLHFCELLVDKQNQRIFRIYINNQTAAGNFDIFAHAGGKNKGIYQD 366

Query: 359 YFDAVSSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGH 418
           Y D VSSK + LWIQLGPD++VGA+G DALL+GLEIFK S+NGNLA + RFDS+G+ V  
Sbjct: 367 YLDPVSSKNDVLWIQLGPDSSVGASG-DALLSGLEIFKLSKNGNLAHLIRFDSTGHSVSD 425

Query: 419 SNKWILLVGIGAGIASVVVLAVIFALLFCYCKNWREKSSDPKNNSPGWWPLFFHRGTLNS 478
           S   I+ + +GAGIA ++    +  L+ C CK  R KS + KNN PGW PLF H    NS
Sbjct: 426 SKMRIIWISVGAGIAIIIFFVFLGILVVCLCKKRRSKSDESKNNPPGWRPLFLHVN--NS 483

Query: 479 TANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCT 538
           TANAK +G      ++A +  G++FTLAEIR AT NFD+ L IGVGGFGKV++GE+ED T
Sbjct: 484 TANAKATGGSLRLNTLAASTMGRKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGT 543

Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
           L AIKRA P S+QGLAEFETEI MLS+LRHRHLVSLIGFCDE NEMILVYEYMANGTLRS
Sbjct: 544 LIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRS 603

Query: 599 HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF 658
           HLFGS+LPPL+WKQRL+ACIG+ARGLHYLHTG+ERGIIHRDVKTTNILLDENFVAKMSDF
Sbjct: 604 HLFGSNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDF 663

Query: 659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINP 718
           GLSK GPSM+HTHVSTAVKGSFGYLDPEYF RQQLTEKSDVYSFGVVLFE VCARAVINP
Sbjct: 664 GLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINP 723

Query: 719 TLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTM 778
           TLPKDQINLA+WA+ WQKQR+L+SIID +L+GNYSPESLEK+GEIAEKCL DEGKNRP M
Sbjct: 724 TLPKDQINLAEWALSWQKQRNLESIIDSNLRGNYSPESLEKYGEIAEKCLADEGKNRPMM 783

Query: 779 GEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEFAER---EAEDGQDAPTTD 829
           GEVLW LEYVLQ+HEAW+R  + +NSFSSSQA+ E  E     A   QD+  T+
Sbjct: 784 GEVLWSLEYVLQIHEAWLRKQNGENSFSSSQAVEEAPESFTLPACSNQDSSETE 837

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845996|ref|XP_002890879.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297336721|gb|EFH67138.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score = 1136 bits (2938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 556/817 (68%), Positives = 658/817 (80%), Gaps = 22/817 (2%)

Query: 18  GEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGIAATTDSLS-GDSIYEPLY 76
           GE+QSKSFLI+CG+N++  VDGR WVGDL+ N +VTL   G  A T S S G S++  +Y
Sbjct: 26  GESQSKSFLIDCGSNTTTEVDGRTWVGDLSPNKSVTLQ--GFDAITASTSKGGSVFGEIY 83

Query: 77  KTARVFADGLNYTFE-IIAGNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPG 135
           KTARVF   LNYTFE I  GNY VRLHF PFP E++NVN+SSF V A+GL+L+ + +  G
Sbjct: 84  KTARVFEAVLNYTFEGITQGNYFVRLHFSPFPIENHNVNESSFSVFADGLRLMLDINIAG 143

Query: 136 EISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKL 195
           EI+H+NL L+S+G N+++ SLVKE+ L +   KL++ F+P KGSFGF+NAIEI+ +V+  
Sbjct: 144 EIAHKNLILESTGHNATASSLVKEFLLPMGPGKLVLSFMPEKGSFGFVNAIEILLLVEVK 203

Query: 196 FADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAG 255
           ++    +            RG+ETMYRLNVGGP++ PS+D  L+R WE D SYM+  NAG
Sbjct: 204 WSLVWGR------------RGIETMYRLNVGGPKLGPSQDLKLYRTWETDLSYMVIENAG 251

Query: 256 SEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLH 315
            E++NSSNITYA  +DS VAPLLVYETAR MSNTEVLEKRFN+SWKFEVDPNFDY VRLH
Sbjct: 252 VEVKNSSNITYAMADDSPVAPLLVYETARMMSNTEVLEKRFNISWKFEVDPNFDYLVRLH 311

Query: 316 FCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQLG 375
           FCEL+ +K NQRIFRIYINN+TA  NFDIF  AGGKN+G ++DYFD VSSK + LWIQLG
Sbjct: 312 FCELLVDKQNQRIFRIYINNQTAAGNFDIFAHAGGKNKGIYQDYFDPVSSKNDVLWIQLG 371

Query: 376 PDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGHSNKWILLVGIGAGIASV 435
           PD++VGA+G DALL+GLEIFK S+NGNLA + RFDS+G+ V  S   I+ + +GAGIA++
Sbjct: 372 PDSSVGASG-DALLSGLEIFKLSKNGNLAHLIRFDSTGHSVDDSKMRIIWISVGAGIATI 430

Query: 436 VVLAVIFALLFCYCKNWREKSSDPKNNSPGWWPLFFHRGTLNSTANAKGSGTQYLKGSVA 495
           +    +  L+ C CK  R KS++ KNN PGW PLF H    NSTANAK +G      ++A
Sbjct: 431 IFFVFLGILVVCLCKKRRNKSNESKNNPPGWRPLFLHVN--NSTANAKATGGSLRLNTLA 488

Query: 496 LTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAE 555
            +  G++FTLAEIR AT NFD+ L IGVGGFGKV++GE+ED TL AIKRA P S+QGLAE
Sbjct: 489 ASTMGRKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKRATPHSQQGLAE 548

Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           FETEI MLS+LRHRHLVSLIGFCDE NEMILVYEYMANGTLRSHLFGS+LPPL+WKQRL+
Sbjct: 549 FETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSNLPPLSWKQRLE 608

Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
           ACIG+ARGLHYLHTG+ERGIIHRDVKTTNILLDENFVAKMSDFGLSK GPSM+HTHVSTA
Sbjct: 609 ACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTA 668

Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ 735
           VKGSFGYLDPEYF RQQLTEKSDVYSFGVVLFE VCARAVINPTLPKDQINLA+WA+ WQ
Sbjct: 669 VKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWALSWQ 728

Query: 736 KQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAW 795
           KQRSL+SIIDP+L+GNYSPESLEK+GEIAEKCL DEGKNRP MGEVLW LEYVLQLHEAW
Sbjct: 729 KQRSLESIIDPNLRGNYSPESLEKYGEIAEKCLADEGKNRPMMGEVLWSLEYVLQLHEAW 788

Query: 796 MRTDDRQNSFSSSQALGEFAEREAEDG---QDAPTTD 829
           +R  + +NSFSSSQA+ E  E     G   QD+  T+
Sbjct: 789 LRKQNGENSFSSSQAVEEAPESYTLQGCSNQDSSETE 825

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	851
TAIR|locus:2204564	849	HERK2 "hercules receptor kinas	0.968	0.970	0.655	1.6e-290
TAIR|locus:2151349	855	THE1 "THESEUS1" [Arabidopsis t	0.887	0.883	0.449	3e-165
TAIR|locus:2075346	830	HERK1 "hercules receptor kinas	0.741	0.760	0.461	6.5e-164
TAIR|locus:2174249	829	AT5G59700 [Arabidopsis thalian	0.753	0.773	0.460	1.2e-162
TAIR|locus:2081895	895	FER "FERONIA" [Arabidopsis tha	0.911	0.867	0.425	1.8e-156
TAIR|locus:2084953	850	ANX1 "ANXUR1" [Arabidopsis tha	0.928	0.929	0.421	8.5e-152
TAIR|locus:2148830	858	ANX2 "ANXUR2" [Arabidopsis tha	0.904	0.897	0.434	1.8e-151
TAIR|locus:2039717	815	AT2G39360 [Arabidopsis thalian	0.383	0.4	0.555	7.1e-145
TAIR|locus:2050080	871	AT2G21480 [Arabidopsis thalian	0.790	0.772	0.443	4.6e-144
TAIR|locus:2136338	878	AT4G39110 [Arabidopsis thalian	0.742	0.719	0.455	7.5e-144

TAIR|locus:2204564 HERK2 "hercules receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 2790 (987.2 bits), Expect = 1.6e-290, P = 1.6e-290
 Identities = 547/834 (65%), Positives = 635/834 (76%)

Query:     1 MERVLLFLVIMLVVARIGEAQSKSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGIA 60
             +E +L  L+    V   GEAQSKSFL++CG+N++  VDGR WVGDL+ N +VTL   G  
Sbjct:     9 LEHLLCVLIFFTYVIGYGEAQSKSFLVDCGSNATTEVDGRTWVGDLSPNKSVTLQ--GFD 66

Query:    61 ATTDSLS-GDSIYEPLYKTARVFADGLNYTFE-IIAGNYIVRLHFCPFPFEDYNVNKSSF 118
             A T S S G S+Y  +YKTARVF   LNYTFE I  GNY VRLHF PF  E++NVN+SSF
Sbjct:    67 AITASTSKGSSVYAEIYKTARVFDAVLNYTFEGITQGNYFVRLHFSPFAIENHNVNESSF 126

Query:   119 GVVANGLKLLSEFSAPGEISHRNLYLQXXXXXXXXXXLVKEYFLGVDLDKLMIEFIPSKG 178
              V A+GL+L+ + +  GEI+H+NL L+          LVKE+ L     KL++ FIP KG
Sbjct:   127 SVFADGLRLMLDINIAGEIAHKNLILESTGHNATASSLVKEFLLPTGPGKLVLSFIPEKG 186

Query:   179 SFGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDL 238
             SFGF+NAIEIV V DKLF +++ KVGG++V   L GRG+ETMYRLNVGGP++ PS+D  L
Sbjct:   187 SFGFVNAIEIVSVDDKLFKESVTKVGGSEVELGLGGRGIETMYRLNVGGPKLGPSKDLKL 246

Query:   239 WRMWEADSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNM 298
             +R WE D SYM+  NAG E++NSSNITYA  +DS VAPLLVYETAR MSNTEVLEKRFN+
Sbjct:   247 YRTWETDLSYMVIENAGVEVKNSSNITYALADDSPVAPLLVYETARMMSNTEVLEKRFNI 306

Query:   299 SWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRD 358
             SWKFEVDPNFDY VRLHFCEL+ +K NQRIFRIYINN+TA  NFDIF  AGGKN+G ++D
Sbjct:   307 SWKFEVDPNFDYLVRLHFCELLVDKQNQRIFRIYINNQTAAGNFDIFAHAGGKNKGIYQD 366

Query:   359 YFDAVSSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVERFDSSGNPVGH 418
             Y D VSSK + LWIQLGPD++VGA+G DALL+GLEIFK S+NGNLA + RFDS+G+ V  
Sbjct:   367 YLDPVSSKNDVLWIQLGPDSSVGASG-DALLSGLEIFKLSKNGNLAHLIRFDSTGHSVSD 425

Query:   419 SNKWILXXXXXXXXXXXXXXXXXXXXXXCYCKNWREKSSDPKNNSPGWWPLFFHRGTLNS 478
             S   I+                      C CK  R KS + KNN PGW PLF H    NS
Sbjct:   426 SKMRIIWISVGAGIAIIIFFVFLGILVVCLCKKRRSKSDESKNNPPGWRPLFLHVN--NS 483

Query:   479 TANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMXXXXXXXXXXXXXXXDCT 538
             TANAK +G      ++A +  G++FTLAEIR AT NFD+ L                D T
Sbjct:   484 TANAKATGGSLRLNTLAASTMGRKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGT 543

Query:   539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
             L AIKRA P S+QGLAEFETEI MLS+LRHRHLVSLIGFCDE NEMILVYEYMANGTLRS
Sbjct:   544 LIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRS 603

Query:   599 HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF 658
             HLFGS+LPPL+WKQRL+ACIG+ARGLHYLHTG+ERGIIHRDVKTTNILLDENFVAKMSDF
Sbjct:   604 HLFGSNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDF 663

Query:   659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINP 718
             GLSK GPSM+HTHVSTAVKGSFGYLDPEYF RQQLTEKSDVYSFGVVLFE VCARAVINP
Sbjct:   664 GLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINP 723

Query:   719 TLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTM 778
             TLPKDQINLA+WA+ WQKQR+L+SIID +L+GNYSPESLEK+GEIAEKCL DEGKNRP M
Sbjct:   724 TLPKDQINLAEWALSWQKQRNLESIIDSNLRGNYSPESLEKYGEIAEKCLADEGKNRPMM 783

Query:   779 GEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEFAER---EAEDGQDAPTTD 829
             GEVLW LEYVLQ+HEAW+R  + +NSFSSSQA+ E  E     A   QD+  T+
Sbjct:   784 GEVLWSLEYVLQIHEAWLRKQNGENSFSSSQAVEEAPESFTLPACSNQDSSETE 837

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009741 "response to brassinosteroid stimulus" evidence=IGI

GO:0009826 "unidimensional cell growth" evidence=IGI

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2151349 THE1 "THESEUS1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1608 (571.1 bits), Expect = 3.0e-165, P = 3.0e-165
 Identities = 359/798 (44%), Positives = 483/798 (60%)

Query:    24 SFLINCGTNSSVNVDGRKWVGD-LASNNNVTLSSSGIA-ATTDSLSGDSIYEPLYKTARV 81
             ++LI+CG++ ++    R +V D L S+  + + +S +A +TT + S +SIY+    TARV
Sbjct:    31 NYLISCGSSQNITFQNRIFVPDSLHSSLVLKIGNSSVATSTTSNNSTNSIYQ----TARV 86

Query:    82 FADGLNYTFEIIA-GNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGEISHR 140
             F+   +Y F+I + G + +RLHF P     +N+  +S  VV     LL+ FS     ++ 
Sbjct:    87 FSSLASYRFKITSLGRHWIRLHFSPINNSTWNLTSASITVVTEDFVLLNNFS----FNNF 142

Query:   141 NLYLQXXXXXXXXXXLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKLFADTI 200
             N              + KEY + V  + L + FIPS  S  F+NAIE+V V D L  D  
Sbjct:   143 N-----------GSYIFKEYTVNVTSEFLTLSFIPSNNSVVFVNAIEVVSVPDNLIPDQA 191

Query:   201 NKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYM-ITANAGSEIR 259
               +  +     LS    ET+YRLN+GGP +  S++  L R W+ D+ Y+ + ++      
Sbjct:   192 LALNPSTPFSGLSLLAFETVYRLNMGGP-LLTSQNDTLGRQWDNDAEYLHVNSSVLVVTA 250

Query:   260 NSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCEL 319
             N S+I Y+ +     AP +VY TA TM +  V    FN++W   VDP+F YFVR+HFC++
Sbjct:   251 NPSSIKYSPSVTQETAPNMVYATADTMGDANVASPSFNVTWVLPVDPDFRYFVRVHFCDI 310

Query:   320 VYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIE-TLWIQLGPDT 378
             V +  N  +F +Y+N+  A  + D+     G    Y +D+    S +    L + +GPD+
Sbjct:   311 VSQALNTLVFNLYVNDDLALGSLDLSTLTNGLKVPYFKDFISNGSVESSGVLTVSVGPDS 370

Query:   379 AVGAAGTDALLNGLEIFKFSQNG-NLASVERFDSSGNPVGHSNKWILXXXXXXXXXXXXX 437
                   T+A +NGLE+ K S    +L+ V    S   P G  +K                
Sbjct:   371 QADI--TNATMNGLEVLKISNEAKSLSGVSSVKSL-LPGGSGSK-SKKKAVIIGSLVGAV 426

Query:   438 XXXXXXXXXCYC---KNWREKSSDPKNNSPG--WWPLFFH--RGTLN-STANAKGSGTQY 489
                      CYC    + +++S+ P+    G  W PL  +    TL  STA+ K +    
Sbjct:   427 TLILLIAVCCYCCLVASRKQRSTSPQEGGNGHPWLPLPLYGLSQTLTKSTASHKSATASC 486

Query:   490 LKGSVALTRAGKRFTLAEIRVATNNFDESLMXXXXXXXXXXXXXXXDCTLAAIKRANPQS 549
             +  S+A T  G+ F   EI  ATN FDES +               D T  A+KR NP+S
Sbjct:   487 I--SLASTHLGRCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKRGNPRS 544

Query:   550 EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLT 609
             EQG+AEF TEIEMLSKLRHRHLVSLIG+CDE++EMILVYEYMANG LRSHL+G+DLPPL+
Sbjct:   545 EQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLS 604

Query:   610 WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH 669
             WKQRL+ CIGAARGLHYLHTGA + IIHRDVKTTNILLDEN VAK++DFGLSKTGPS++ 
Sbjct:   605 WKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQ 664

Query:   670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
             THVSTAVKGSFGYLDPEYF RQQLTEKSDVYSFGVVL EV+C R  +NP LP++Q+N+A+
Sbjct:   665 THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAE 724

Query:   730 WAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL 789
             WAM WQK+  L  I+D +L G  +P SL+KFGE AEKCL + G +RP+MG+VLW+LEY L
Sbjct:   725 WAMAWQKKGLLDQIMDSNLTGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYAL 784

Query:   790 QLHE---AWMRTDDRQNS 804
             QL E   A M  DD   +
Sbjct:   785 QLEETSSALMEPDDNSTN 802

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IGI

GO:0009791 "post-embryonic development" evidence=IGI

GO:0051510 "regulation of unidimensional cell growth" evidence=IGI;RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=IGI

GO:0009826 "unidimensional cell growth" evidence=IGI

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2075346 HERK1 "hercules receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1450 (515.5 bits), Expect = 6.5e-164, Sum P(2) = 6.5e-164
 Identities = 302/654 (46%), Positives = 402/654 (61%)

Query:   156 LVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKLFADTINKVGGNDVNF-NLSG 214
             +VKEY L V  + L++ F PS GSF F+NAIE++ + D L   +   VG N   F ++S 
Sbjct:   139 VVKEYSLNVTTNDLVLTFTPSSGSFAFVNAIEVISIPDTLITGSPRFVG-NPAQFPDMSM 197

Query:   215 RGVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAGSEIRNSSNITYA---STND 271
             +G+ET++R+N+GGP +  + D  L R W  DS +++  N    +   S + +    +T D
Sbjct:   198 QGLETIHRVNMGGPLVASNNDT-LTRTWVPDSEFLLEKNLAKSMSKFSTVNFVPGYATED 256

Query:   272 SSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRI 331
             S  AP  VY +   M++ +     FN++W+F+VDP F Y+ R HFC++V    NQ  F +
Sbjct:   257 S--APRTVYGSCTEMNSADNPNSIFNVTWEFDVDPGFQYYFRFHFCDIVSLSLNQLYFNL 314

Query:   332 YINNRTAENNFDIFVQAGGKNRG-YHRDYFDAVSSKIETLWIQLGPDTAVGAAGTDALLN 390
             Y+++  A  + D+         G Y  D+          + + +GP T V     +A++N
Sbjct:   315 YVDSMVAATDIDLSTLVDNTLAGAYSMDFVTQTPKGSNKVRVSIGPST-VHTDYPNAIVN 373

Query:   391 GLEIFKFSQNGNLASVERFDSSGNPVGHSNKWILXXXXXXXXXXXXXXXXXXXXXXCYCK 450
             GLEI K + +    S   F    +    SN  ++                      C+  
Sbjct:   374 GLEIMKMNNSKGQLSTGTFVPGSSSSSKSNLGLIVGSAIGSLLAVVFLGS------CFVL 427

Query:   451 NWREKSSDPKNNSPGWWPLFFHRGTLNSTANAKGSGTQYLKGSVALTRAGKRFTLAEIRV 510
              ++++      +S  W P F   GT  S  +   +GT     S+  T A  R   A ++ 
Sbjct:   428 -YKKRKRGQDGHSKTWMP-FSINGT--SMGSKYSNGTTLT--SIT-TNANYRIPFAAVKD 480

Query:   511 ATNNFDESLMXXXXXXXXXXXXXXXDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRH 570
             ATNNFDES                 D T  A+KR NP+S+QGLAEF TEIEMLS+ RHRH
Sbjct:   481 ATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRH 540

Query:   571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
             LVSLIG+CDE NEMIL+YEYM NGT++SHL+GS LP LTWKQRL+ CIGAARGLHYLHTG
Sbjct:   541 LVSLIGYCDENNEMILIYEYMENGTVKSHLYGSGLPSLTWKQRLEICIGAARGLHYLHTG 600

Query:   631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
               + +IHRDVK+ NILLDENF+AK++DFGLSKTGP ++ THVSTAVKGSFGYLDPEYF R
Sbjct:   601 DSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRR 660

Query:   691 QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG 750
             QQLT+KSDVYSFGVVLFEV+CAR VI+PTLP++ +NLA+WAMKWQK+  L  IID  L+G
Sbjct:   661 QQLTDKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKKGQLDQIIDQSLRG 720

Query:   751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQNS 804
             N  P+SL KF E  EKCL D G +RP+MG+VLW+LEY LQL EA +  +   NS
Sbjct:   721 NIRPDSLRKFAETGEKCLADYGVDRPSMGDVLWNLEYALQLQEAVIDGEPEDNS 774

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IGI

GO:0009791 "post-embryonic development" evidence=IGI

GO:0051510 "regulation of unidimensional cell growth" evidence=IGI;RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=IGI

GO:0009826 "unidimensional cell growth" evidence=IGI

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2174249 AT5G59700 [Arabidopsis thaliana (taxid:3702)]

 Score = 1436 (510.6 bits), Expect = 1.2e-162, Sum P(2) = 1.2e-162
 Identities = 306/664 (46%), Positives = 406/664 (61%)

Query:   156 LVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGR 215
             ++KEY L V  D L + F PS  SF F+NA+E+V V D LF+   +  G       LS +
Sbjct:   138 VMKEYSLNVATDHLELTFTPSGDSFAFLNALEVVSVPDTLFSGDPSFAGSPGKFQGLSWQ 197

Query:   216 GVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAGSEIRNSSNITYA-STNDSSV 274
              +ET+YR+N+GGP + PS D  L R+WE DS +++  N    +   +++ Y         
Sbjct:   198 ALETVYRVNMGGPRVTPSNDT-LSRIWEPDSEFLVEKNLVKSVSKIASVDYVPGFATEET 256

Query:   275 APLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYIN 334
             AP  VY T   M++ +     FN++W F+VDP F YF+R HFC++V +  NQ  F +Y++
Sbjct:   257 APRTVYGTCTEMNSADNPSSNFNVTWDFDVDPGFQYFLRFHFCDIVSKALNQLYFNLYVD 316

Query:   335 NRTAENNFDIFVQAGGKNRG-YHRDYFDAVSSKIETLWIQLGPDTAVGAAGTDALLNGLE 393
             +     N D+         G Y  D+    +   + + + +G  ++V      A+LNGLE
Sbjct:   317 SMDVVENLDLSSYLSNTLSGAYAMDFVTGSAKLTKRIRVSIGR-SSVHTDYPTAILNGLE 375

Query:   394 IFKFSQNGNLASVERFDSSGNPVGHSNKWILXXXXXXXXXXXXXXXXXXXXXXCYCKNWR 453
             I K + + +  S+  F  SG+    + K  +                       Y K  R
Sbjct:   376 IMKMNNSKSQLSIGTFLPSGS--SSTTKKNVGMIIGLTIGSLLALVVLGGFFVLYKKRGR 433

Query:   454 EKSSDPKNNSPGWWPLFFHRGTLNSTANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATN 513
                 D   NS  W PL  + GT +S+     +GT     S+A + +  R  L  ++ ATN
Sbjct:   434 ----DQDGNSKTWIPLSSN-GTTSSS-----NGTTL--ASIA-SNSSYRIPLVAVKEATN 480

Query:   514 NFDESLMXXXXXXXXXXXXXXXDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
             +FDE+                 D T  A+KRANP+S+QGLAEF TEIEMLS+ RHRHLVS
Sbjct:   481 SFDENRAIGVGGFGKVYKGELHDGTKVAVKRANPKSQQGLAEFRTEIEMLSQFRHRHLVS 540

Query:   574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
             LIG+CDE NEMILVYEYM NGTL+SHL+GS L  L+WKQRL+ CIG+ARGLHYLHTG  +
Sbjct:   541 LIGYCDENNEMILVYEYMENGTLKSHLYGSGLLSLSWKQRLEICIGSARGLHYLHTGDAK 600

Query:   634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL 693
              +IHRDVK+ NILLDEN +AK++DFGLSKTGP ++ THVSTAVKGSFGYLDPEYF RQQL
Sbjct:   601 PVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQL 660

Query:   694 TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS 753
             TEKSDVYSFGVV+FEV+CAR VI+PTL ++ +NLA+WAMKWQK+  L+ IIDP L+G   
Sbjct:   661 TEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLAEWAMKWQKKGQLEHIIDPSLRGKIR 720

Query:   754 PESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGE 813
             P+SL KFGE  EKCL D G +RP+MG+VLW+LEY LQL EA +  D       S+  +GE
Sbjct:   721 PDSLRKFGETGEKCLADYGVDRPSMGDVLWNLEYALQLQEAVVDGDPED----STNMIGE 776

Query:   814 FAER 817
                R
Sbjct:   777 LPLR 780

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0007062 "sister chromatid cohesion" evidence=RCA

GO:0007131 "reciprocal meiotic recombination" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0033044 "regulation of chromosome organization" evidence=RCA

GO:0042138 "meiotic DNA double-strand break formation" evidence=RCA

GO:0045132 "meiotic chromosome segregation" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2081895 FER "FERONIA" [Arabidopsis thaliana (taxid:3702)]

 Score = 1525 (541.9 bits), Expect = 1.8e-156, P = 1.8e-156
 Identities = 351/824 (42%), Positives = 474/824 (57%)

Query:     3 RVLLFLVIMLVVAR--IGEAQ---SKSFLINCGTNSS--VNVDGRKWVGDLASNNNVTLS 55
             R+ L L+++L+ A   I  A    ++  L+NCG  +S   + D R W+ D+ S      S
Sbjct:     9 RLSLLLLLLLISAATLISAADYSPTEKILLNCGGGASNLTDTDNRIWISDVKSK--FLSS 66

Query:    56 SSGIAATTDSLSGD-SIYEPLYKTARVFADGLNYTFEIIAGNYIVRLHFCPFPFEDYNVN 114
             SS  + T+ +L+ D S+ E  Y TARVF     YTF + +G   VRL+F P  ++  N  
Sbjct:    67 SSEDSKTSPALTQDPSVPEVPYMTARVFRSPFTYTFPVASGRKFVRLYFYPNSYDGLNAT 126

Query:   115 KSSFGVVANGLKLLSEFSAPGEISHRNLYLQXXXXXXXXXXLVKEYFLGVDLDKLMIEFI 174
              S F V      LL  FSA  + +    Y            ++KE+ + V+   L + F 
Sbjct:   127 NSLFSVSFGPYTLLKNFSA-SQTAEALTY----------AFIIKEFVVNVEGGTLNMTFT 175

Query:   175 PSKG---SFGFINAIEIVPVVDKLFAD--TINKVGGN-DVNFNLSGRGVETMYRLNVGGP 228
             P      ++ F+N IE+  + D   +   T+  VG +  V  + S   +E +YRLNVGG 
Sbjct:   176 PESAPSNAYAFVNGIEVTSMPDMYSSTDGTLTMVGSSGSVTIDNS-TALENVYRLNVGGN 234

Query:   229 EIKPSRDPDLWRMWEADSSYMITANAGSEIRNSSNIT--YASTNDSSVAPLLVYETARTM 286
             +I PS D  L+R W  D  Y+  A  G       N+T  Y +   + VAP+ VY TAR+M
Sbjct:   235 DISPSADTGLYRSWYDDQPYIFGAGLGIPETADPNMTIKYPTGTPTYVAPVDVYSTARSM 294

Query:   287 SNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVYE--KANQRIFRIYINNRTAENNFDI 344
               T  +   +N++W F +D  F Y VRLHFCE+     K NQR+F IY+NN+TAE   D+
Sbjct:   295 GPTAQINLNYNLTWIFSIDSGFTYLVRLHFCEVSSNITKINQRVFTIYLNNQTAEPEADV 354

Query:   345 FVQAGGKNRGYHRDYF--DAVSSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFS-QNG 401
                       +H+DY       +  + LW+ L P+        D+LLNG+EIFK +  +G
Sbjct:   355 IAWTSSNGVPFHKDYVVNPPEGNGQQDLWLALHPNPVNKPEYYDSLLNGVEIFKMNTSDG 414

Query:   402 NLASVERFDS---SGNP---VGHSNKWILXXXXXXXXXXXXXXXXXXXXXXCYCKNWRE- 454
             NLA          + +P   +  + +                         C    +R  
Sbjct:   415 NLAGTNPIPGPQVTADPSKVLRPTTRKSKSNTAIIAGAASGAVVLALIIGFCVFGAYRRR 474

Query:   455 KSSD--PKNNSP-GWWPLFFHRGTLNSTANAKGSGTQYLKGSVALTRAGKRFTLAEIRVA 511
             K  D  P +++  GW PL  + G  +S  +AK + T     S+  +   + F+ AEI+ A
Sbjct:   475 KRGDYQPASDATSGWLPLSLY-GNSHSAGSAKTNTTGSYASSLP-SNLCRHFSFAEIKAA 532

Query:   512 TNNFDES-LMXXXXXXXXXXXXXXXDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRH 570
             T NFDES ++                 T  AIKR NP SEQG+ EF+TEIEMLSKLRHRH
Sbjct:   533 TKNFDESRVLGVGGFGKVYRGEIDGGTTKVAIKRGNPMSEQGVHEFQTEIEMLSKLRHRH 592

Query:   571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
             LVSLIG+C+E  EMILVY+YMA+GT+R HL+ +  P L WKQRL+ CIGAARGLHYLHTG
Sbjct:   593 LVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNPSLPWKQRLEICIGAARGLHYLHTG 652

Query:   631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
             A+  IIHRDVKTTNILLDE +VAK+SDFGLSKTGP+++HTHVST VKGSFGYLDPEYF R
Sbjct:   653 AKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRR 712

Query:   691 QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG 750
             QQLTEKSDVYSFGVVLFE +CAR  +NPTL K+Q++LA+WA    K+  L  I+DP+LKG
Sbjct:   713 QQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVSLAEWAPYCYKKGMLDQIVDPYLKG 772

Query:   751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEA 794
               +PE  +KF E A KC+ D+G  RP+MG+VLW+LE+ LQL E+
Sbjct:   773 KITPECFKKFAETAMKCVLDQGIERPSMGDVLWNLEFALQLQES 816

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0010483 "pollen tube reception" evidence=IMP

GO:0043680 "filiform apparatus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009791 "post-embryonic development" evidence=IMP

GO:0050832 "defense response to fungus" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0010193 "response to ozone" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2084953 ANX1 "ANXUR1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1481 (526.4 bits), Expect = 8.5e-152, P = 8.5e-152
 Identities = 350/830 (42%), Positives = 472/830 (56%)

Query:     3 RVLLFLVIM-LVVARIGEAQSKSFLINCGTN-SSVNVDGRKWVGDLASNNNVTLSSSGIA 60
             R+L FL  +  ++     +  +   ++CGT+ +S + D +KW  D         + + I 
Sbjct:     6 RILFFLTCLSFLLVFPTRSNGQDLALSCGTSEASADQDKKKWEPD----TKFLKTGNSIH 61

Query:    61 ATTDSLSGDSIYEPLYKTARVFADGLNYTFEIIAGN-YIVRLHFCPFPFEDYNVNKSSFG 119
             AT        +    Y TAR+F     Y   I     +++RL+F P  +   N++ S F 
Sbjct:    62 ATATYQDPSLLSTVPYMTARIFTAPATYEIPIKGDKRHLLRLYFYPSTYTGLNISNSYFT 121

Query:   120 VVANGLKLLSEFSAPGEISHRNLYLQXXXXXXXXXXLVKEYFLG-VDLDKLMIEFIPS-- 176
             V AN + LLS FSA   I+ + L             LVKEY L   D D L I+F PS  
Sbjct:   122 VEANDVTLLSNFSAA--ITCQAL---------TQAYLVKEYSLAPTDKDVLSIKFTPSDK 170

Query:   177 -KGSFGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSRD 235
              + +F FIN IE++ + + LF DT   VG  D   +     +++M+RLNVGG +I  S+D
Sbjct:   171 YRDAFAFINGIEVIQMPE-LF-DTAALVGFTDQTMDAKTANLQSMFRLNVGGQDIPGSQD 228

Query:   236 PD-LWRMWEADSSYMITANAGSEIRNSSNITYASTN-DSSVAPLLVYETARTMSNTEVLE 293
                L R W  D+ Y+ +A  G  ++ S+N      N   S+AP  +Y+TAR+      + 
Sbjct:   229 SGGLTRTWYNDAPYIFSAGLGVTLQASNNFRINYQNMPVSIAPADIYKTARSQGPNGDIN 288

Query:   294 KRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNF---DIFVQAGG 350
              + N++W F++D NF Y +RLHFCE    K NQ++F IYINNRTA+ +    DI    G 
Sbjct:   289 LKSNLTWMFQIDKNFTYILRLHFCEFQLSKINQKVFNIYINNRTAQADTTPADIIGWTGE 348

Query:   351 KNRGYHRDYFDAVSSKI--ETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLASVER 408
             K    ++DY   V +    E + +Q+ P T       D+ LNGLEIFK     NLA    
Sbjct:   349 KGIPMYKDYAIYVDANNGGEEITLQMTPSTFGQPEYYDSSLNGLEIFKMDTMKNLAGPNP 408

Query:   409 FDSSGNPVGHSNKWILXXXXXXXXXXXXXXXXXXXXXXCYCKNWREKSSDPKNNS--PGW 466
               S         K                              +++K      +S    W
Sbjct:   409 EPSPMQAEEEVKKEFKNEKRHAFIIGSAGGVLAVLIGALCFTAYKKKQGYQGGDSHTSSW 468

Query:   467 WPLFFHRGT--LNSTANAKGSGTQYLKGSVA-LTRAGKRFTLAEIRVATNNFDESLMXXX 523
              P++ +  T    ST + K +   +L    A L R   RF+L EI+  T NFD+S +   
Sbjct:   469 LPIYGNSTTSGTKSTISGKSNNGSHLSNLAAGLCR---RFSLPEIKHGTQNFDDSNVIGV 525

Query:   524 XXXXXXXXXXXXDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE 583
                           T  A+K++NP SEQGL EFETEIE+LS+LRH+HLVSLIG+CDE  E
Sbjct:   526 GGFGKVYKGVIDGTTKVAVKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGE 585

Query:   584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
             M LVY+YMA GTLR HL+ +  P LTWK+RL+  IGAARGLHYLHTGA+  IIHRDVKTT
Sbjct:   586 MCLVYDYMAFGTLREHLYNTKKPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTT 645

Query:   644 NILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFG 703
             NIL+DEN+VAK+SDFGLSKTGP+M   HV+T VKGSFGYLDPEYF RQQLTEKSDVYSFG
Sbjct:   646 NILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFG 705

Query:   704 VVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEI 763
             VVLFE++CAR  +NP+LPK+Q++L DWAM  +++ +L+ IIDP+LKG  + E L+KF + 
Sbjct:   706 VVLFEILCARPALNPSLPKEQVSLGDWAMNCKRKGNLEDIIDPNLKGKINAECLKKFADT 765

Query:   764 AEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQ-NSFSSSQALG 812
             AEKCL+D G  RPTMG+VLW+LE+ LQL E    T  R  N+  SS+ LG
Sbjct:   766 AEKCLNDSGLERPTMGDVLWNLEFALQLQETADGTRHRTPNNGGSSEDLG 815

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009860 "pollen tube growth" evidence=IGI;RCA

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0090404 "pollen tube tip" evidence=IDA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2148830 ANX2 "ANXUR2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1478 (525.3 bits), Expect = 1.8e-151, P = 1.8e-151
 Identities = 354/815 (43%), Positives = 469/815 (57%)

Query:     3 RVLLFLVIMLVVARIGEAQS--KSFLINCGTNS-SVNVDGRKWVGDLASNNNVTLSSSGI 59
             R+L   +    V  +  +QS  +   ++CG +  +V+ D +KW  D       T ++   
Sbjct:     6 RILFSFLCFFYVLLVSPSQSNGQDISLSCGASEPAVDQDKKKWEPDTKFLK--TPNTVHA 63

Query:    60 AATTDSLSGDSIYEPLYKTARVFADGLNYTFEIIAGN-YIVRLHFCPFPFEDYNVNKSSF 118
              AT    S  S   P Y T+R+F     Y   +     +++RLHF P  +   N+  S F
Sbjct:    64 PATYQDPSLLSTV-P-YMTSRIFTAPATYEIPVKGDKRHMLRLHFYPSTYTGLNILDSYF 121

Query:   119 GVVANGLKLLSEFSAPGEISHRNLYLQXXXXXXXXXXLVKEYFLGV-DLDKLMIEFIPSK 177
              V AN L LLS FSA   I+ + L             LV+EY L   + D L I F PS 
Sbjct:   122 SVAANDLTLLSNFSAA--ITCQAL---------TQAYLVREYSLAPSEKDVLSIIFTPSD 170

Query:   178 G---SFGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKPSR 234
                 +F FIN IE++P+ + LF DT + VG +D   +     ++TM+RLNVGG +I  S+
Sbjct:   171 KHPKAFAFINGIEVIPMPE-LF-DTASLVGFSDQTSDTKTANLQTMFRLNVGGQDIPGSQ 228

Query:   235 DPD-LWRMWEADSSYMITANAGSEIRNSSN--ITYASTNDSSVAPLLVYETARTMSNTEV 291
             D   L R W  D+ Y+ +A  G  ++ S+N  I Y      S AP  VY+TAR+      
Sbjct:   229 DSGGLTRTWYNDAPYIFSAGLGVTLQASNNFRIDYQKM-PVSTAPADVYKTARSQGPNGD 287

Query:   292 LEKRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAE---NNFDIFVQA 348
             +  + N++W F+VD NF Y +RLHFCE    K NQ++F I+INNRTA+   N  DI    
Sbjct:   288 INMKSNLTWMFQVDTNFTYIMRLHFCEFQLAKINQKVFNIFINNRTAQGDTNPADILGWT 347

Query:   349 GGKNRGYHRDYFDAVSSKI----ETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQNGNLA 404
             GGK    ++DY   V +      E + +Q+ P T       D+ LNGLEIFK     NLA
Sbjct:   348 GGKGIPTYKDYAIYVDANTGGGGEEISLQMTPSTFGQPEYYDSQLNGLEIFKIDTMKNLA 407

Query:   405 SVERFDSSGNPVGHSNKWILXXXXXXXXXXXXXXXXXXXX--XXCYCKNWRE-KSSDPKN 461
                   S         K                           C+    R+ K S   +
Sbjct:   408 GPNPKPSPMQANEDVKKDFQGDKRITAFVIGSAGGVAAVLFCALCFTMYQRKRKFSGSDS 467

Query:   462 NSPGWWPLF--FHRGTLNSTANAKGSGTQYLKGSVA-LTRAGKRFTLAEIRVATNNFDES 518
             ++  W P++   H     ST + K +   +L    A L R   RF+L+EI+  T+NFDES
Sbjct:   468 HTSSWLPIYGNSHTSATKSTISGKSNNGSHLSNLAAGLCR---RFSLSEIKHGTHNFDES 524

Query:   519 LMXXXXXXXXXXXXXXXDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
              +                 T  AIK++NP SEQGL EFETEIE+LS+LRH+HLVSLIG+C
Sbjct:   525 NVIGVGGFGKVYKGVIDGGTKVAIKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYC 584

Query:   579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
             DE  EM L+Y+YM+ GTLR HL+ +  P LTWK+RL+  IGAARGLHYLHTGA+  IIHR
Sbjct:   585 DEGGEMCLIYDYMSLGTLREHLYNTKRPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHR 644

Query:   639 DVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSD 698
             DVKTTNILLDEN+VAK+SDFGLSKTGP+M   HV+T VKGSFGYLDPEYF RQQLTEKSD
Sbjct:   645 DVKTTNILLDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSD 704

Query:   699 VYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLE 758
             VYSFGVVLFEV+CAR  +NP+L K+Q++L DWAM  +++ +L+ IIDP+LKG  +PE L+
Sbjct:   705 VYSFGVVLFEVLCARPALNPSLSKEQVSLGDWAMNCKRKGTLEDIIDPNLKGKINPECLK 764

Query:   759 KFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE 793
             KF + AEKCL D G +RPTMG+VLW+LE+ LQL E
Sbjct:   765 KFADTAEKCLSDSGLDRPTMGDVLWNLEFALQLQE 799

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009860 "pollen tube growth" evidence=IGI

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0090404 "pollen tube tip" evidence=IDA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2039717 AT2G39360 [Arabidopsis thaliana (taxid:3702)]

 Score = 964 (344.4 bits), Expect = 7.1e-145, Sum P(3) = 7.1e-145
 Identities = 186/335 (55%), Positives = 240/335 (71%)

Query:   466 WWPLFFHR--GTLNSTANAKGSGTQYLKGSV------ALTRAGKRFTLAEIRVATNNFDE 517
             WW +   R       T +++G   Q  K         + ++ G R+ LA I+ AT++FDE
Sbjct:   430 WWCIRKRRRRNRQMQTVHSRGDDHQIKKNETGESLIFSSSKIGYRYPLALIKEATDDFDE 489

Query:   518 SLMXXXXXXXXXXXXXXXDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
             SL+               D T  A+KR  PQS QGLAEF+TE+EML++ RHRHLVSLIG+
Sbjct:   490 SLVIGVGGFGKVYKGVLRDKTEVAVKRGAPQSRQGLAEFKTEVEMLTQFRHRHLVSLIGY 549

Query:   578 CDEQNEMILVYEYMANGTLRSHLFG-SDLPPLTWKQRLDACIGAARGLHYLHTGAERGII 636
             CDE +EMI+VYEYM  GTL+ HL+   D P L+W+QRL+ C+GAARGLHYLHTG+ R II
Sbjct:   550 CDENSEMIIVYEYMEKGTLKDHLYDLDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAII 609

Query:   637 HRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEK 696
             HRDVK+ NILLD+NF+AK++DFGLSKTGP ++ THVSTAVKGSFGYLDPEY  RQQLTEK
Sbjct:   610 HRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEK 669

Query:   697 SDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPES 756
             SDVYSFGVV+ EVVC R VI+P+LP++++NL +WAMK  K+  L+ IIDP L G    E 
Sbjct:   670 SDVYSFGVVMLEVVCGRPVIDPSLPREKVNLIEWAMKLVKKGKLEDIIDPFLVGKVKLEE 729

Query:   757 LEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL 791
             ++K+ E+ EKCL   G  RP MG++LW+LE++LQ+
Sbjct:   730 VKKYCEVTEKCLSQNGIERPAMGDLLWNLEFMLQV 764

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2050080 AT2G21480 [Arabidopsis thaliana (taxid:3702)]

 Score = 1408 (500.7 bits), Expect = 4.6e-144, P = 4.6e-144
 Identities = 308/694 (44%), Positives = 408/694 (58%)

Query:   158 KEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGV 217
             KEY L +   +  + F P KGS  FIN IE+V   D+L +D    +   +    LS    
Sbjct:   177 KEYLLNMTDAQFALRFKPMKGSAAFINGIELVSAPDELISDAGTSLFPVNGFSGLSDYAY 236

Query:   218 ETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAGSEIR-NSSNITYASTNDSSVAP 276
             +++YR+NVGGP I P  D  L R W  D  Y+   N   +++ N + I Y       +AP
Sbjct:   237 QSVYRVNVGGPLITPQNDT-LGRTWTPDKEYLKDENLAKDVKTNPTAIIYPPGVTPLIAP 295

Query:   277 LLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNR 336
               VY T   M++++ ++  FN++W F  +P+F YF+RLHFC+++ +  N   F +YIN +
Sbjct:   296 QTVYATGAEMADSQTIDPNFNVTWNFPSNPSFHYFIRLHFCDIISKSLNDLYFNVYINGK 355

Query:   337 TAENNFDIFVQAGGKNRGYHRDYFDAVSSKIET--LWIQLGPDTAVGAAGTDALLNGLEI 394
             TA +  D+   AG  +  Y++D    V+S + T  L +Q+GP         +A+LNG+E+
Sbjct:   356 TAISGLDLSTVAGDLSAPYYKDI--VVNSTLMTSELQVQIGP-MGEDTGKKNAILNGVEV 412

Query:   395 FKFSQNGNLASVERFDSSGNPVGHSNKWILXXXXXXXXXXXXXXXXXXXXXXCYCKNWRE 454
              K S + N    E F   G       + ++                       Y   W++
Sbjct:   413 LKMSNSVNSLDGE-FGVDGQRASMGKQGMVATAGFVMMFGAFVGLGAMV----Y--KWKK 465

Query:   455 KSSD-PKNNSPGWWPLFFHRGTLNSTANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATN 513
             +  D  K NS   W L  H G      +  GS    L  S AL   G+ F+L+E++  T 
Sbjct:   466 RPQDWQKRNSFSSWLLPIHAGDSTFMTSKTGSHKSNLYNS-ALG-LGRYFSLSELQEVTK 523

Query:   514 NFDESLMXXXXXXXXXXXXXXXDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
             NFD S +               D T  AIKR NPQSEQG+ EF TEI+MLSKLRHRHLVS
Sbjct:   524 NFDASEIIGVGGFGNVYIGTIDDGTQVAIKRGNPQSEQGITEFHTEIQMLSKLRHRHLVS 583

Query:   574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
             LIG+CDE  EMILVYEYM+NG  R HL+G +L PLTWKQRL+ CIGAARGLHYLHTG  +
Sbjct:   584 LIGYCDENAEMILVYEYMSNGPFRDHLYGKNLSPLTWKQRLEICIGAARGLHYLHTGTAQ 643

Query:   634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL 693
             GIIHRDVK+TNILLDE  VAK++DFGLSK   +    HVSTAVKGSFGYLDPEYF RQQL
Sbjct:   644 GIIHRDVKSTNILLDEALVAKVADFGLSKD-VAFGQNHVSTAVKGSFGYLDPEYFRRQQL 702

Query:   694 TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS 753
             T+KSDVYSFGVVL E +CAR  INP LP++Q+NLA+WAM W+++  L+ IIDPHL G  +
Sbjct:   703 TDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMLWKQKGLLEKIIDPHLVGAVN 762

Query:   754 PESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGE 813
             PES++KF E AEKCL D G +RPTMG+VLW+LEY LQL EA+ +         + + +  
Sbjct:   763 PESMKKFAEAAEKCLADYGVDRPTMGDVLWNLEYALQLQEAFSQGKAEAEEVETPKPV-- 820

Query:   814 FAEREAEDGQDAPTTDAENCLGLKMTGEVESATM 847
              A   A     A TT A +   +  T E + +T+
Sbjct:   821 -AVPAAAPTSPAATTAAASERPVSQTEEKDDSTV 853

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2136338 AT4G39110 [Arabidopsis thaliana (taxid:3702)]

 Score = 1406 (500.0 bits), Expect = 7.5e-144, P = 7.5e-144
 Identities = 298/654 (45%), Positives = 403/654 (61%)

Query:   158 KEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVVDKLFADTINKVGGNDVNFN-LSGRG 216
             KEY + +   +  + F P K S  FINAIE+V   D+L +D+   +    + F+ LS   
Sbjct:   178 KEYLVNMTDAQFALRFRPMKSSAAFINAIEVVSAPDELISDSGTALFPV-IGFSGLSDYA 236

Query:   217 VETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAGSEIRNS-SNITYASTNDSSVA 275
              +++YR+NVGGP I P  D  L R W  D  ++   N   +++ + S I Y       +A
Sbjct:   237 YQSVYRVNVGGPLIMPQNDT-LGRTWIPDKEFLKDENLAKDVKTTPSAIKYPPEVTPLIA 295

Query:   276 PLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINN 335
             P  VY TA  M+N+  ++  FN+SW F  +P+F+Y +RLHFC++V +  N   F +YIN 
Sbjct:   296 PQTVYATAVEMANSLTIDPNFNVSWNFPSNPSFNYLIRLHFCDIVSKSLNDLYFNVYING 355

Query:   336 RTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQLGPDTAVGA-AGT-DALLNGLE 393
             +TA +  D+   AG     Y++D     +     L +Q+GP   +G   GT +A+LNG+E
Sbjct:   356 KTAISGLDLSTVAGNLAAPYYKDIVVNATLMGPELQVQIGP---MGEDTGTKNAILNGVE 412

Query:   394 IFKFSQNGNLASVERFDSSGNPVGHSNKWILXXXXXXXXXXXXXXXXXXXXXXCYCKNWR 453
             + K S + N    E F   G   G     ++                       Y   W+
Sbjct:   413 VLKMSNSVNSLDGE-FGVDGRTTGMGKHGMVATAGFVMMFGAFIGLGAMV----Y--KWK 465

Query:   454 EKSSD-PKNNSPGWWPLFFHRGTLNSTANAKGSGTQYLKGSVALTRAGKRFTLAEIRVAT 512
             ++  D  K NS   W L  H G  +ST      G+Q      +    G+ F+L+E++ AT
Sbjct:   466 KRPQDWQKRNSFSSWLLPIHAG--DSTFMTSKGGSQKSNFYNSTLGLGRYFSLSELQEAT 523

Query:   513 NNFDESLMXXXXXXXXXXXXXXXDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLV 572
              NF+ S +               D T  A+KR NPQSEQG+ EF+TEI+MLSKLRHRHLV
Sbjct:   524 KNFEASQIIGVGGFGNVYIGTLDDGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLV 583

Query:   573 SLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
             SLIG+CDE +EMILVYE+M+NG  R HL+G +L PLTWKQRL+ CIG+ARGLHYLHTG  
Sbjct:   584 SLIGYCDENSEMILVYEFMSNGPFRDHLYGKNLAPLTWKQRLEICIGSARGLHYLHTGTA 643

Query:   633 RGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
             +GIIHRDVK+TNILLDE  VAK++DFGLSK   +    HVSTAVKGSFGYLDPEYF RQQ
Sbjct:   644 QGIIHRDVKSTNILLDEALVAKVADFGLSKD-VAFGQNHVSTAVKGSFGYLDPEYFRRQQ 702

Query:   693 LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY 752
             LT+KSDVYSFGVVL E +CAR  INP LP++Q+NLA+WAM+W+++  L+ IIDPHL G  
Sbjct:   703 LTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMQWKRKGLLEKIIDPHLAGTI 762

Query:   753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWM--RTDDRQNS 804
             +PES++KF E AEKCL+D G +RPTMG+VLW+LEY LQL EA+   + ++ +N+
Sbjct:   763 NPESMKKFAEAAEKCLEDYGVDRPTMGDVLWNLEYALQLQEAFTQGKAEETENA 816

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0030048 "actin filament-based movement" evidence=RCA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SA72	Y1357_ARATH	2, ., 7, ., 1, 1, ., -	0.6822	0.9682	0.9705	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00029752001 SubName- Full=Chromosome chr10 scaffold_50, whole genome shotgun sequence; (850 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	851
pfam12819	335	pfam12819, Malectin_like, Carbohydrate-binding pro	7e-63
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-51
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	4e-50
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-49
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	8e-49
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-48
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-44
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-42
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-39
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-31
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-31
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-31
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-30
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-30
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	7e-30
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	6e-29
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	9e-29
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	9e-29
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	1e-28
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	4e-28
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-27
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	6e-27
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-26
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-26
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	4e-26
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	5e-26
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	3e-25
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	1e-24
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-24
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-24
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-24
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	6e-24
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	7e-24
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	5e-23
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	5e-23
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	1e-22
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-22
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	2e-22
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	5e-22
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	5e-22
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	6e-22
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	7e-22
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	9e-22
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-21
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	1e-21
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-21
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	4e-21
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	4e-21
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	6e-21
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	6e-21
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	6e-21
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	6e-21
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	7e-21
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	8e-21
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	9e-21
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-20
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-20
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-20
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-20
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-20
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-20
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	2e-20
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	3e-20
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	3e-20
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	3e-20
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	4e-20
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	5e-20
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	5e-20
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	5e-20
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	6e-20
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	6e-20
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	8e-20
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	9e-20
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	1e-19
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-19
pfam11721	164	pfam11721, Malectin, Di-glucose binding within end	2e-19
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	2e-19
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	3e-19
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	4e-19
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	4e-19
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	4e-19
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	7e-19
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	9e-19
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	1e-18
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-18
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-18
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-18
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	2e-18
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-18
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	3e-18
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	4e-18
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	9e-18
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	3e-17
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	4e-17
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	6e-17
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	6e-17
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-16
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-16
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-16
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	1e-16
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	1e-16
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-16
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	3e-16
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	3e-16
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	4e-16
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	6e-16
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	9e-16
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	9e-16
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	1e-15
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	1e-15
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	1e-15
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	1e-15
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-15
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	3e-15
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	3e-15
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	3e-15
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	3e-15
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	4e-15
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	5e-15
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	6e-15
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	7e-15
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	8e-15
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	9e-15
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	1e-14
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	1e-14
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	1e-14
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	1e-14
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-14
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-14
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-14
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	2e-14
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	2e-14
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	3e-14
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	3e-14
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	4e-14
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	4e-14
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	6e-14
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	9e-14
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	9e-14
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	9e-14
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	1e-13
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	1e-13
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	1e-13
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-13
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-13
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-13
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-13
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-13
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	3e-13
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	3e-13
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	4e-13
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	4e-13
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	7e-13
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	9e-13
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	9e-13
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	1e-12
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	1e-12
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	1e-12
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-12
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-12
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	1e-12
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-12
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-12
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-12
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	3e-12
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	3e-12
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	3e-12
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	3e-12
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	3e-12
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	3e-12
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	4e-12
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	4e-12
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	4e-12
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	5e-12
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	6e-12
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	6e-12
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	6e-12
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	9e-12
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	1e-11
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	1e-11
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-11
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	1e-11
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-11
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-11
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	2e-11
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	2e-11
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	2e-11
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-11
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-11
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-11
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-11
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-11
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	3e-11
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-11
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	3e-11
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	4e-11
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	4e-11
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	5e-11
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	5e-11
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	6e-11
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	6e-11
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	6e-11
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	7e-11
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	7e-11
pfam11721	164	pfam11721, Malectin, Di-glucose binding within end	8e-11
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	9e-11
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	9e-11
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	1e-10
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	1e-10
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-10
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	1e-10
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	2e-10
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	2e-10
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	2e-10
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-10
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	2e-10
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-10
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	3e-10
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	3e-10
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	3e-10
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	3e-10
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	4e-10
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	4e-10
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	4e-10
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	5e-10
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	5e-10
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	7e-10
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	7e-10
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	8e-10
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	8e-10
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	9e-10
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	1e-09
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	1e-09
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	1e-09
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	2e-09
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	2e-09
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-09
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	2e-09
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	3e-09
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	4e-09
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	4e-09
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	5e-09
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	5e-09
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	8e-09
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	8e-09
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	8e-09
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	1e-08
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-08
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	1e-08
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-08
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	2e-08
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	3e-08
PLN03150	623	PLN03150, PLN03150, hypothetical protein; Provisio	3e-08
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	3e-08
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	4e-08
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	4e-08
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	4e-08
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	5e-08
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	5e-08
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	5e-08
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	6e-08
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	6e-08
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	6e-08
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	6e-08
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	7e-08
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	8e-08
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	8e-08
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	9e-08
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-07
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-07
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	2e-07
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	3e-07
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	3e-07
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	4e-07
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	4e-07
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	4e-07
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	4e-07
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	5e-07
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	5e-07
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	9e-07
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	1e-06
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-06
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	2e-06
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-06
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	2e-06
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	3e-06
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	3e-06
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	5e-06
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	6e-06
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	7e-06
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	8e-06
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	8e-06
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	1e-05
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	1e-05
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	2e-05
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	2e-05
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	3e-05
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	3e-05
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	5e-05
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	8e-05
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	1e-04
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	2e-04
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	2e-04
PLN03150	623	PLN03150, PLN03150, hypothetical protein; Provisio	3e-04
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	4e-04
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	5e-04
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	6e-04

>gnl|CDD|221790 pfam12819, Malectin_like, Carbohydrate-binding protein of the ER

 Score =  214 bits (548), Expect = 7e-63
 Identities = 99/382 (25%), Positives = 148/382 (38%), Gaps = 60/382 (15%)

Query: 27  INCGTNSSVNV----DGRKWVGDLASNNNVTLSSSGIAATTDSLSGDSIYEPLYKTARVF 82
           I+CG  S+ +      G  WV D           +G +      +  S     YKT R F
Sbjct: 1   IDCGLPSNESYTDPSTGITWVSD------AGFIDTGKSGNISKENSSSFLSKPYKTLRSF 54

Query: 83  ADG--LNYTFEIIAG---NYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGEI 137
            DG    YT  +  G    Y++R  F    ++  N   S          L    +    +
Sbjct: 55  PDGKRNCYTLPVTPGKGTKYLIRATFLYGNYDGLNSVSSPPSF-----DLYLGVNLWTTV 109

Query: 138 SHRNLYLQSSGGNSSSISLVKEYFLGV-DLDKLMIEFIPSKGSFGFINAIEIVPVVDKLF 196
           +  N          S  S+VKEY + V   D L +  + +     FI+A+E+ P+ D L+
Sbjct: 110 NLSN---------DSGDSVVKEYIIHVTKSDTLSVCLVNTGTGTPFISALELRPLPDSLY 160

Query: 197 ADTINKVGGNDVNFNLSGRGVETMYRLNVG--GPEIKPSRDPDLWRMWEADSSYMITANA 254
             +               + ++ + RLN G     I+   D    R+WE   S    +  
Sbjct: 161 PSS------------GGSQALKLVARLNFGGSEGTIRYPDDV-YDRIWEPFFS----SPG 203

Query: 255 GSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRL 314
            S+I  S ++  +S N   + P  V +TA T +N        N +W   VDPNF+Y+V L
Sbjct: 204 WSQISTSLSVDISSNNAPYIPPSAVLQTAVTPTNA---SAPLNFTWDL-VDPNFEYYVYL 259

Query: 315 HFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQL 374
           HF E+  +    R F IYIN +T   +       G      + D+   VS       I L
Sbjct: 260 HFAEI--QSLETREFDIYINGKTVYGDVSPKY-LGTDTGALYLDFPVNVSGGGLL-NISL 315

Query: 375 GPDTAVGAAGTDALLNGLEIFK 396
            P      +    LLN LEIFK
Sbjct: 316 VP---TSGSTLPPLLNALEIFK 334

Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. Length = 335

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  181 bits (461), Expect = 1e-51
 Identities = 83/280 (29%), Positives = 132/280 (47%), Gaps = 34/280 (12%)

Query: 521 IGVGGFGKVFKGEIED----CTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLI 575
           +G G FG+V+KG+++      T  A+K      SE+   +F  E  ++ KL H ++V L+
Sbjct: 3   LGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLL 62

Query: 576 GFCDEQNEMILVYEYMANGTLRSHL-------FGSDLPPLTWKQRLDACIGAARGLHYLH 628
           G C E+  + LV EYM  G L  +L          +   L+ K  L   I  A+G+ YL 
Sbjct: 63  GVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA 122

Query: 629 TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
               +  +HRD+   N L+ E+ V K+SDFGLS+     ++    T  K    ++ PE  
Sbjct: 123 ---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESL 179

Query: 689 WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH- 747
                T KSDV+SFGV+L+E+    A   P L  +++              L+ +   + 
Sbjct: 180 KDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEV--------------LEYLRKGYR 225

Query: 748 -LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
             K  Y P+ L    E+   C   + ++RPT  E++  LE
Sbjct: 226 LPKPEYCPDELY---ELMLSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  176 bits (450), Expect = 4e-50
 Identities = 81/278 (29%), Positives = 133/278 (47%), Gaps = 37/278 (13%)

Query: 520 MIGVGGFGKVFKGEIEDC-----TLAAIKRA-NPQSEQGLAEFETEIEMLSKLRHRHLVS 573
            +G G FG+V+KG ++          A+K      SEQ + EF  E  ++ KL H ++V 
Sbjct: 6   KLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVK 65

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           L+G C E+  +++V EYM  G L  +L  +    L+    L   +  ARG+ YL     +
Sbjct: 66  LLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE---SK 122

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA---VKGSFGYLDPEYFWR 690
             IHRD+   N L+ EN V K+SDFGLS+     ++  V      ++    ++ PE    
Sbjct: 123 NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIR----WMAPESLKE 178

Query: 691 QQLTEKSDVYSFGVVLFEVVCARAVINPTL---PKDQINLADWAMKWQKQRSLKSIIDPH 747
            + T KSDV+SFGV+L+E+         TL   P   ++ A+  +++ K+          
Sbjct: 179 GKFTSKSDVWSFGVLLWEIF--------TLGEEPYPGMSNAE-VLEYLKKGYRLPKPP-- 227

Query: 748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL 785
                 P  L K   +  +C  ++ ++RPT  E++  L
Sbjct: 228 ----NCPPELYK---LMLQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  175 bits (446), Expect = 1e-49
 Identities = 80/278 (28%), Positives = 131/278 (47%), Gaps = 38/278 (13%)

Query: 520 MIGVGGFGKVFKGEIEDC-----TLAAIKRA-NPQSEQGLAEFETEIEMLSKLRHRHLVS 573
            +G G FG+V+KG+++          A+K      SEQ + EF  E  ++ KL H ++V 
Sbjct: 6   KLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVK 65

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           L+G C E+  + +V EYM  G L S+L  +  P L+    L   +  ARG+ YL     +
Sbjct: 66  LLGVCTEEEPLYIVMEYMEGGDLLSYLRKNR-PKLSLSDLLSFALQIARGMEYLE---SK 121

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA---VKGSFGYLDPEYFWR 690
             IHRD+   N L+ EN V K+SDFGLS+     ++         ++    ++ PE    
Sbjct: 122 NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIR----WMAPESLKE 177

Query: 691 QQLTEKSDVYSFGVVLFEVVCARAVINPTL---PKDQINLADWAMKWQKQRSLKSIIDPH 747
            + T KSDV+SFGV+L+E+         TL   P   ++  +  +++ K           
Sbjct: 178 GKFTSKSDVWSFGVLLWEIF--------TLGEQPYPGMSNEE-VLEYLKNGYRLPQPP-- 226

Query: 748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL 785
                 P  L     +  +C  ++ ++RPT  E++  L
Sbjct: 227 ----NCPPELYD---LMLQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  171 bits (436), Expect = 8e-49
 Identities = 70/200 (35%), Positives = 103/200 (51%), Gaps = 10/200 (5%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAE-FETEIEMLSKLRHRHLVSLIGFC 578
           +G GGFG V+     +     AIK    +    L E    EIE+L KL H ++V L G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
           +++N + LV EY   G+L+  L   +   L+  + L   +    GL YLH     GIIHR
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLLK-ENEGKLSEDEILRILLQILEGLEYLH---SNGIIHR 116

Query: 639 DVKTTNILLDE-NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEK 696
           D+K  NILLD  N   K++DFGLSK         +   + G+  Y+ PE    +   +EK
Sbjct: 117 DLKPENILLDSDNGKVKLADFGLSKLLT--SDKSLLKTIVGTPAYMAPEVLLGKGYYSEK 174

Query: 697 SDVYSFGVVLFEVVCARAVI 716
           SD++S GV+L+E+   + +I
Sbjct: 175 SDIWSLGVILYELPELKDLI 194

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  171 bits (436), Expect = 3e-48
 Identities = 66/197 (33%), Positives = 98/197 (49%), Gaps = 10/197 (5%)

Query: 521 IGVGGFGKVFKGEI-----EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSL 574
           +G G FG+V+KG +        T  A+K      SE+   EF  E  ++ KL H ++V L
Sbjct: 7   LGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRL 66

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
           +G C +   + +V EYM  G L   L       LT K  L   +  A+G+ YL     + 
Sbjct: 67  LGVCTQGEPLYIVTEYMPGGDLLDFLRKHG-EKLTLKDLLQMALQIAKGMEYLE---SKN 122

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
            +HRD+   N L+ EN V K+SDFGLS+     ++       K    ++ PE     + T
Sbjct: 123 FVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFT 182

Query: 695 EKSDVYSFGVVLFEVVC 711
            KSDV+SFGV+L+E+  
Sbjct: 183 SKSDVWSFGVLLWEIFT 199

Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  161 bits (410), Expect = 1e-44
 Identities = 87/270 (32%), Positives = 134/270 (49%), Gaps = 25/270 (9%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSE--QGLAEFETEIEMLSKLRHRHLVSLIGF 577
           +G G FG V+K        + A+K    +SE  +       EI +L +L H ++V LI  
Sbjct: 7   LGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDA 66

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIH 637
            ++++ + LV EY   G L  +L  S   PL+  +     +   RGL YLH     GIIH
Sbjct: 67  FEDKDHLYLVMEYCEGGDLFDYL--SRGGPLSEDEAKKIALQILRGLEYLH---SNGIIH 121

Query: 638 RDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPE-YFWRQQLTEK 696
           RD+K  NILLDEN V K++DFGL+K    ++ +   T   G+  Y+ PE          K
Sbjct: 122 RDLKPENILLDENGVVKIADFGLAKKL--LKSSSSLTTFVGTPWYMAPEVLLGGNGYGPK 179

Query: 697 SDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPES 756
            DV+S GV+L+E++  +       P    N+ D     Q Q  ++ I+ P L+ +    S
Sbjct: 180 VDVWSLGVILYELLTGK------PPFSGENILD-----QLQL-IRRILGPPLEFDEPKWS 227

Query: 757 L--EKFGEIAEKCLDDEGKNRPTMGEVLWH 784
              E+  ++ +KCL+ +   RPT  E+L H
Sbjct: 228 SGSEEAKDLIKKCLNKDPSKRPTAEEILQH 257

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  154 bits (393), Expect = 2e-42
 Identities = 76/268 (28%), Positives = 124/268 (46%), Gaps = 27/268 (10%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAE-FETEIEMLSKLRHRHLVSLIGFC 578
           +G G FGKV+   + +   L AIK    +  +   E    EI++L KL+H ++V L    
Sbjct: 7   LGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVF 66

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLT--WKQRLDACIGAARGLHYLHTGAERGII 636
           ++++++ LV EY   G L   L       L+    +     I     L YLH    +GI+
Sbjct: 67  EDEDKLYLVMEYCEGGDLFDLL--KKRGRLSEDEARFYLRQI--LSALEYLH---SKGIV 119

Query: 637 HRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEK 696
           HRD+K  NILLDE+   K++DFGL++    ++     T   G+  Y+ PE    +   + 
Sbjct: 120 HRDLKPENILLDEDGHVKLADFGLAR---QLDPGEKLTTFVGTPEYMAPEVLLGKGYGKA 176

Query: 697 SDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPES 756
            D++S GV+L+E++  +    P  P D          ++K    K    P    + SPE+
Sbjct: 177 VDIWSLGVILYELLTGK----PPFPGDD----QLLELFKKIGKPKPPFPPPEW-DISPEA 227

Query: 757 LEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                ++  K L  + + R T  E L H
Sbjct: 228 K----DLIRKLLVKDPEKRLTAEEALQH 251

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  146 bits (370), Expect = 2e-39
 Identities = 80/272 (29%), Positives = 132/272 (48%), Gaps = 28/272 (10%)

Query: 520 MIGVGGFGKVFKGEIEDC-TLAAIKRAN--PQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           ++G G FG V+    +D   L A+K       SE+ L   E EI +LS L+H ++V   G
Sbjct: 7   LLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYG 66

Query: 577 FC-DEQNEMILVY-EYMANGTLRSHL--FGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
              DE+   + ++ EY++ G+L S L  FG    P+   ++    I    GL YLH    
Sbjct: 67  SERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVI--RKYTRQI--LEGLAYLH---S 119

Query: 633 RGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
            GI+HRD+K  NIL+D + V K++DFG +K    +E    + +V+G+  ++ PE    ++
Sbjct: 120 NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEE 179

Query: 693 LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY 752
               +D++S G  + E+   +       P  ++     A+     +   S   P +  + 
Sbjct: 180 YGRAADIWSLGCTVIEMATGKP------PWSELGNPMAALY----KIGSSGEPPEIPEHL 229

Query: 753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
           S E+ + F     KCL  + K RPT  E+L H
Sbjct: 230 SEEAKD-F---LRKCLRRDPKKRPTADELLQH 257

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  123 bits (312), Expect = 1e-31
 Identities = 78/270 (28%), Positives = 122/270 (45%), Gaps = 30/270 (11%)

Query: 520 MIGVGGFGKVFKGE-IEDCTLAAIKRAN--PQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
            IG G FGKV+      D  L  +K  +    SE+   +   E+++L KL H +++    
Sbjct: 7   QIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYE 66

Query: 577 FCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
             +E+ ++ +V EY   G L   +     +  P   +Q LD  +     L YLH    R 
Sbjct: 67  SFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRK 123

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT--HVSTAVKGSFGYLDPEYFWRQQ 692
           I+HRD+K  NI L  N + K+ DFG+SK    +  T     T V G+  YL PE    + 
Sbjct: 124 ILHRDIKPQNIFLTSNGLVKLGDFGISKV---LSSTVDLAKTVV-GTPYYLSPELCQNKP 179

Query: 693 LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY 752
              KSD++S G VL+E+   +       P +  NL + A+K      LK    P +   Y
Sbjct: 180 YNYKSDIWSLGCVLYELCTLK------HPFEGENLLELALK-----ILKGQYPP-IPSQY 227

Query: 753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
           S E       +    L  + + RP++ ++L
Sbjct: 228 SSE----LRNLVSSLLQKDPEERPSIAQIL 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score =  124 bits (313), Expect = 1e-31
 Identities = 70/208 (33%), Positives = 104/208 (50%), Gaps = 22/208 (10%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKR-ANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
           +G G FGKVF GE        D  L A+K      S     +FE E E+L+  +H ++V 
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72

Query: 574 LIGFCDEQNEMILVYEYMANGT----LRSH--------LFGSDLPPLTWKQRLDACIGAA 621
             G C E +  I+V+EYM +G     LRSH           S +  LT  Q L   +  A
Sbjct: 73  FYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIA 132

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG 681
            G+ YL   A +  +HRD+ T N L+  + V K+ DFG+S+   + ++  V         
Sbjct: 133 SGMVYL---ASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIR 189

Query: 682 YLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           ++ PE    ++ T +SDV+SFGVVL+E+
Sbjct: 190 WMPPESIMYRKFTTESDVWSFGVVLWEI 217

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  122 bits (309), Expect = 3e-31
 Identities = 77/271 (28%), Positives = 123/271 (45%), Gaps = 22/271 (8%)

Query: 515 FDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
           F+    IG GGFG+V+K          AIK    +S++   +   EI++L K +H ++V 
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
             G   +++E+ +V E+ + G+L+  L  S    LT  Q    C    +GL YLH     
Sbjct: 62  YYGSYLKKDELWIVMEFCSGGSLKD-LLKSTNQTLTESQIAYVCKELLKGLEYLH---SN 117

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL 693
           GIIHRD+K  NILL  +   K+ DFGLS     +  T     + G+  ++ PE    +  
Sbjct: 118 GIIHRDIKAANILLTSDGEVKLIDFGLSAQ---LSDTKARNTMVGTPYWMAPEVINGKPY 174

Query: 694 TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS 753
             K+D++S G+   E+    A   P   +        A+          + +P     +S
Sbjct: 175 DYKADIWSLGITAIEL----AEGKPPYSELPPMK---ALFKIATNGPPGLRNPE---KWS 224

Query: 754 PESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
            E    F +  +KCL    + RPT  ++L H
Sbjct: 225 DE----FKDFLKKCLQKNPEKRPTAEQLLKH 251

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  120 bits (304), Expect = 1e-30
 Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 20/196 (10%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           IG G FG V+KG  +E     AIK+ + +   E+ L     EI++L  L+H ++V  IG 
Sbjct: 8   IGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGS 67

Query: 578 CDEQNEMILVYEYMANGTLRS-----HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
            +  + + ++ EY  NG+LR        F   L  +   Q L       +GL YLH   E
Sbjct: 68  IETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVL-------QGLAYLH---E 117

Query: 633 RGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           +G+IHRD+K  NIL  ++ V K++DFG++     +       +V G+  ++ PE      
Sbjct: 118 QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD--DASVVGTPYWMAPEVIEMSG 175

Query: 693 LTEKSDVYSFGVVLFE 708
            +  SD++S G  + E
Sbjct: 176 ASTASDIWSLGCTVIE 191

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score =  120 bits (302), Expect = 2e-30
 Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 37/272 (13%)

Query: 521 IGVGGFGKVFKGEIEDCTLA--AIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           IG G FG V  G+     +A   +K  +  ++  LAE       ++ LRH +LV L+G  
Sbjct: 14  IGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASV----MTTLRHPNLVQLLGVV 69

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
            + N + +V EYMA G+L  +L       +T  Q+L   +    G+ YL    E+  +HR
Sbjct: 70  LQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFVHR 126

Query: 639 DVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSD 698
           D+   N+L+ E+ VAK+SDFGL+K   S         VK    +  PE    ++ + KSD
Sbjct: 127 DLAARNVLVSEDLVAKVSDFGLAKEA-SQGQDSGKLPVK----WTAPEALREKKFSTKSD 181

Query: 699 VYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLE 758
           V+SFG++L+E+     V  P +P                  LK ++ PH++  Y  E+ E
Sbjct: 182 VWSFGILLWEIYSFGRVPYPRIP------------------LKDVV-PHVEKGYRMEAPE 222

Query: 759 K----FGEIAEKCLDDEGKNRPTMGEVLWHLE 786
                  ++ + C + +   RPT  ++   L 
Sbjct: 223 GCPPEVYKVMKDCWELDPAKRPTFKQLREQLA 254

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  122 bits (305), Expect = 7e-30
 Identities = 72/275 (26%), Positives = 121/275 (44%), Gaps = 18/275 (6%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRH-RHLVSLIGFC 578
           +G G FG+V+     +   L  + +      + +  F  EI++L+ L H  ++V L  F 
Sbjct: 8   LGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFF 67

Query: 579 DEQNEMILVYEYMANGTLRSHL-FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIH 637
            ++  + LV EY+  G+L   L       PL+  + L         L YLH    +GIIH
Sbjct: 68  QDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIH 124

Query: 638 RDVKTTNILLDEN-FVAKMSDFGLSK----TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           RD+K  NILLD +  V K+ DFGL+K     G +     + +   G+ GY+ PE      
Sbjct: 125 RDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLS 184

Query: 693 L---TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK 749
           L   +  SD++S G+ L+E++       P   +   +     +K   +    S+  P   
Sbjct: 185 LAYASSSSDIWSLGITLYELLTGL---PPFEGEKNSSATSQTLKIILELPTPSLASPLSP 241

Query: 750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
            +      +   ++ +K L  + KNR +    L H
Sbjct: 242 -SNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275

Length = 384

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score =  117 bits (293), Expect = 6e-29
 Identities = 71/210 (33%), Positives = 105/210 (50%), Gaps = 26/210 (12%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSL 574
           +G G FGKVF  E       +D  L A+K     SE    +F+ E E+L+ L+H+H+V  
Sbjct: 13  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72

Query: 575 IGFCDEQNEMILVYEYMANGTL----RSHLFGSD-----------LPPLTWKQRLDACIG 619
            G C E   +++V+EYM +G L    RSH  G D              LT  Q L     
Sbjct: 73  YGVCTEGRPLLMVFEYMRHGDLNRFLRSH--GPDAKILAGGEDVAPGQLTLGQMLAIASQ 130

Query: 620 AARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGS 679
            A G+ YL   A    +HRD+ T N L+ +  V K+ DFG+S+   S ++  V       
Sbjct: 131 IASGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 187

Query: 680 FGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
             ++ PE    ++ T +SD++SFGVVL+E+
Sbjct: 188 IRWMPPESILYRKFTTESDIWSFGVVLWEI 217

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score =  116 bits (292), Expect = 9e-29
 Identities = 71/286 (24%), Positives = 119/286 (41%), Gaps = 38/286 (13%)

Query: 514 NFDESLMIGVGGFGKVFKGEI------EDCTLAAIKRANPQSEQG-LAEFETEIEMLSKL 566
           N  E   +G G FG+VF  +          TL  +K      ++   +EF  E++M  KL
Sbjct: 6   NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL 65

Query: 567 RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGS-------DLPPLTWKQRLDACIG 619
            H+++V L+G C E     ++ EY   G L+  L  +         PPL+ KQ++  C  
Sbjct: 66  SHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQ 125

Query: 620 AARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME-HTHVSTAVKG 678
            A G+ +L        +HRD+   N L+      K+S   LSK   + E +   +  +  
Sbjct: 126 IALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALI-- 180

Query: 679 SFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI--NLADWAMKWQK 736
              +L PE       + KSDV+SFGV+++EV     +    L  +++   L    ++   
Sbjct: 181 PLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPV 240

Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
                            P  L K   +  +C     K+RP+  E++
Sbjct: 241 PEG-------------CPSRLYK---LMTRCWAVNPKDRPSFSELV 270

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score =  115 bits (290), Expect = 9e-29
 Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 5/190 (2%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           +G G FG+V++G  ++    AIK           +F+ E++ L +LRH+HL+SL   C  
Sbjct: 14  LGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSV 73

Query: 581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDV 640
              + ++ E M  G+L + L   +   L     +D     A G+ YL    E+  IHRD+
Sbjct: 74  GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDL 130

Query: 641 KTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
              NIL+ E+ V K++DFGL++     E  ++S+  K  + +  PE       + KSDV+
Sbjct: 131 AARNILVGEDLVCKVADFGLARL--IKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVW 188

Query: 701 SFGVVLFEVV 710
           SFG++L+E+ 
Sbjct: 189 SFGILLYEMF 198

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score =  116 bits (292), Expect = 1e-28
 Identities = 71/206 (34%), Positives = 105/206 (50%), Gaps = 20/206 (9%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSL 574
           +G G FGKVF  E       +D  L A+K     S+    +F  E E+L+ L+H H+V  
Sbjct: 13  LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 72

Query: 575 IGFCDEQNEMILVYEYMANGTL----RSH-----LFGSDLPP--LTWKQRLDACIGAARG 623
            G C E + +I+V+EYM +G L    R+H     L      P  LT  Q L      A G
Sbjct: 73  YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAG 132

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           + YL   A +  +HRD+ T N L+ EN + K+ DFG+S+   S ++  V         ++
Sbjct: 133 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 189

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFEV 709
            PE    ++ T +SDV+S GVVL+E+
Sbjct: 190 PPESIMYRKFTTESDVWSLGVVLWEI 215

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score =  114 bits (287), Expect = 4e-28
 Identities = 75/232 (32%), Positives = 114/232 (49%), Gaps = 37/232 (15%)

Query: 502 RFTLAEIRVATNNFDESLMIGVGGFGKVFKGEI------EDCTLAAIK----RANPQSEQ 551
              L+ +R     F E L  G G FGKV+KGE+         T  AIK     A P+ +Q
Sbjct: 1   EIPLSAVR-----FLEEL--GEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQ 53

Query: 552 GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLF--------GS 603
              EF  E E++S L+H ++V L+G C ++    +++EY+A+G L   L         G+
Sbjct: 54  ---EFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGA 110

Query: 604 DLPPLTWKQRLDA------CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           +    T K  LD        I  A G+ YL   +    +HRD+   N L+ E    K+SD
Sbjct: 111 ESGDETVKSSLDCSDFLHIAIQIAAGMEYL---SSHHFVHRDLAARNCLVGEGLTVKISD 167

Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           FGLS+   S ++  V +       ++ PE     + T +SD++SFGVVL+E+
Sbjct: 168 FGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score =  111 bits (279), Expect = 6e-27
 Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)

Query: 520 MIGVGGFGKVFKGEIE---DCT--LAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVS 573
            +G G FGKV     +   D T    A+K  N    EQ  ++FE EIE+L  L H ++V 
Sbjct: 11  QLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVK 70

Query: 574 LIGFCDEQ--NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
             G C++     + L+ EY+ +G+LR +L       +  K+ L       +G+ YL    
Sbjct: 71  YKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLG--- 126

Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGS--FGYLDPEYFW 689
            +  IHRD+   NIL++   + K+SDFGL+K  P  +  +       S  F Y  PE   
Sbjct: 127 SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWY-APECLR 185

Query: 690 RQQLTEKSDVYSFGVVLFE 708
             + +  SDV+SFGV L+E
Sbjct: 186 TSKFSSASDVWSFGVTLYE 204

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score =  110 bits (276), Expect = 6e-27
 Identities = 75/271 (27%), Positives = 123/271 (45%), Gaps = 36/271 (13%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGL-AEFETEIEMLSKLRHRHLVSLIGFCD 579
           IG G FG V+KG ++  T  A+K         L  +F  E E+L +  H ++V LIG C 
Sbjct: 3   IGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV 62

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
           ++  + +V E +  G+L + L       LT K+ L   + AA G+ YL +   +  IHRD
Sbjct: 63  QKQPIYIVMELVPGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLES---KNCIHRD 118

Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG----SFGYLDPEYFWRQQLTE 695
           +   N L+ EN V K+SDFG+S+     E   + T   G       +  PE     + T 
Sbjct: 119 LAARNCLVGENNVLKISDFGMSRE----EEGGIYTVSDGLKQIPIKWTAPEALNYGRYTS 174

Query: 696 KSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY--- 752
           +SDV+S+G++L+E         P                  Q++ + I     +  Y   
Sbjct: 175 ESDVWSYGILLWETFSLGDTPYPG--------------MSNQQTRERI-----ESGYRMP 215

Query: 753 SPESL-EKFGEIAEKCLDDEGKNRPTMGEVL 782
           +P+   E+   +  +C   + +NRP+  E+ 
Sbjct: 216 APQLCPEEIYRLMLQCWAYDPENRPSFSEIY 246

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score =  109 bits (274), Expect = 1e-26
 Identities = 68/197 (34%), Positives = 97/197 (49%), Gaps = 22/197 (11%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAE--FETEIEMLSKLRHRHLVSLIGFC 578
           +G G FG V  G+       AIK      E  ++E  F  E +++ KL H +LV L G C
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMIR---EGAMSEDDFIEEAKVMMKLSHPNLVQLYGVC 68

Query: 579 DEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
            +Q  + +V EYMANG L      R    G++         LD C      + YL     
Sbjct: 69  TKQRPIFIVTEYMANGCLLNYLRERKGKLGTE-------WLLDMCSDVCEAMEYLE---S 118

Query: 633 RGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
            G IHRD+   N L+ E+ V K+SDFGL++     ++T  S   K    +  PE F   +
Sbjct: 119 NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-SSQGTKFPVKWAPPEVFDYSR 177

Query: 693 LTEKSDVYSFGVVLFEV 709
            + KSDV+SFGV+++EV
Sbjct: 178 FSSKSDVWSFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score =  109 bits (273), Expect = 2e-26
 Identities = 67/191 (35%), Positives = 102/191 (53%), Gaps = 10/191 (5%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           IG G FG V+ G   +    AIK  R    SE+   +F  E +++ KL H  LV L G C
Sbjct: 12  IGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEE---DFIEEAQVMMKLSHPKLVQLYGVC 68

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
            E++ + LV+E+M +G L  +L  +     + +  L  C+    G+ YL       +IHR
Sbjct: 69  TERSPICLVFEFMEHGCLSDYL-RAQRGKFSQETLLGMCLDVCEGMAYLE---SSNVIHR 124

Query: 639 DVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSD 698
           D+   N L+ EN V K+SDFG+++     ++T  ST  K    +  PE F   + + KSD
Sbjct: 125 DLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS-STGTKFPVKWSSPEVFSFSKYSSKSD 183

Query: 699 VYSFGVVLFEV 709
           V+SFGV+++EV
Sbjct: 184 VWSFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score =  108 bits (272), Expect = 4e-26
 Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 9/194 (4%)

Query: 521 IGVGGFGKVFKGEI----EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLI 575
           IG G FG+V +G +    +     AIK      S++   +F TE  ++ +  H +++ L 
Sbjct: 12  IGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLE 71

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGI 635
           G   +   ++++ EYM NG+L   L  +D    T  Q +    G A G+ YL   +E   
Sbjct: 72  GVVTKSRPVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYL---SEMNY 127

Query: 636 IHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTE 695
           +HRD+   NIL++ N V K+SDFGLS+     E T+ +   K    +  PE    ++ T 
Sbjct: 128 VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTS 187

Query: 696 KSDVYSFGVVLFEV 709
            SDV+SFG+V++EV
Sbjct: 188 ASDVWSFGIVMWEV 201

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score =  108 bits (272), Expect = 5e-26
 Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 30/216 (13%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVS 573
           IG G FG+VF+         E  T+ A+K    + S    A+F+ E  ++++  H ++V 
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHL--------------------FGSDLPPLTWKQR 613
           L+G C     M L++EYMA G L   L                     G +  PL+  ++
Sbjct: 73  LLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQ 132

Query: 614 LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS 673
           L      A G+ YL   +ER  +HRD+ T N L+ EN V K++DFGLS+   S ++   S
Sbjct: 133 LCIAKQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAS 189

Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
                   ++ PE  +  + T +SDV+++GVVL+E+
Sbjct: 190 ENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 225

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score =  106 bits (267), Expect = 3e-25
 Identities = 63/213 (29%), Positives = 113/213 (53%), Gaps = 25/213 (11%)

Query: 520 MIGVGGFGKVFKGEI-------EDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHL 571
            +G G FG+V K E        E  T+A     +  +E+ L++  +E+EM+  + +H+++
Sbjct: 19  PLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 78

Query: 572 VSLIGFCDEQNEMILVYEYMANGTLRSHL-----------FGSDLPP---LTWKQRLDAC 617
           ++L+G C ++  + +V EY A+G LR  L                PP   LT K  +   
Sbjct: 79  INLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFA 138

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
              ARG+ +L   A +  IHRD+   N+L+ E+ V K++DFGL++    +++   +T  +
Sbjct: 139 YQVARGMEFL---ASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGR 195

Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
               ++ PE  + +  T +SDV+SFGV+L+E+ 
Sbjct: 196 LPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIF 228

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score =  104 bits (261), Expect = 1e-24
 Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 23/209 (11%)

Query: 521 IGVGGFGKVFKGE------IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSL 574
           +G G FGKVF  E       +D  L A+K     +     +F+ E E+L+ L+H H+V  
Sbjct: 13  LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 72

Query: 575 IGFCDEQNEMILVYEYMANGTL----RSH----LFGSDLPPLTWK------QRLDACIGA 620
            G C + + +I+V+EYM +G L    R+H    +   D  P   K      Q L      
Sbjct: 73  YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 132

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSF 680
           A G+ YL   A +  +HRD+ T N L+  N + K+ DFG+S+   S ++  V        
Sbjct: 133 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 189

Query: 681 GYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
            ++ PE    ++ T +SDV+SFGV+L+E+
Sbjct: 190 RWMPPESIMYRKFTTESDVWSFGVILWEI 218

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score =  103 bits (259), Expect = 2e-24
 Identities = 67/190 (35%), Positives = 96/190 (50%), Gaps = 5/190 (2%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           +G G FG+V+ G     T  A+K   P +      F  E +++ KLRH  LV L   C E
Sbjct: 14  LGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSE 72

Query: 581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDV 640
           +  + +V EYM+ G+L   L   +   L   Q +D     A G+ YL     R  IHRD+
Sbjct: 73  EEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDL 129

Query: 641 KTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
              NIL+ EN V K++DFGL++     E+T      K    +  PE     + T KSDV+
Sbjct: 130 AARNILVGENLVCKIADFGLARLIEDDEYT-AREGAKFPIKWTAPEAANYGRFTIKSDVW 188

Query: 701 SFGVVLFEVV 710
           SFG++L E+V
Sbjct: 189 SFGILLTEIV 198

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score =  102 bits (257), Expect = 3e-24
 Identities = 72/270 (26%), Positives = 119/270 (44%), Gaps = 28/270 (10%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           +G G FG+V++G   + T  A+K   P +     +F  E +++ KLRH  L+ L   C  
Sbjct: 14  LGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQLYAVCTL 72

Query: 581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDV 640
           +  + +V E M  G+L  +L G     L   Q +D     A G+ YL     +  IHRD+
Sbjct: 73  EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDL 129

Query: 641 KTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
              N+L+ EN + K++DFGL++      +       K    +  PE     + + KSDV+
Sbjct: 130 AARNVLVGENNICKVADFGLARVIKEDIYE-AREGAKFPIKWTAPEAALYNRFSIKSDVW 188

Query: 701 SFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY---SPESL 757
           SFG++L E+V    +  P +   ++         Q+           +   Y    P   
Sbjct: 189 SFGILLTEIVTYGRMPYPGMTNAEV--------LQQ-----------VDQGYRMPCPPGC 229

Query: 758 EK-FGEIAEKCLDDEGKNRPTMGEVLWHLE 786
            K   +I   C  ++  +RPT   + W LE
Sbjct: 230 PKELYDIMLDCWKEDPDDRPTFETLQWKLE 259

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score =  102 bits (256), Expect = 3e-24
 Identities = 67/196 (34%), Positives = 95/196 (48%), Gaps = 20/196 (10%)

Query: 521 IGVGGFGKVFKGEIEDC-TLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSL-I 575
           IG G FGKV   +  D   + A+K  N Q    +  +     E  +L +L H  LV+L  
Sbjct: 8   IGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWY 67

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ-RL-DACIGAARGLHYLHTGAER 633
            F DE+N M LV + +  G LR HL  S     + +Q +     I  A  L YLH    +
Sbjct: 68  SFQDEEN-MYLVVDLLLGGDLRYHL--SQKVKFSEEQVKFWICEIVLA--LEYLH---SK 119

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV-STAVKGSFGYLDPEYFWRQQ 692
           GIIHRD+K  NILLDE     ++DF ++    +       +T+  G+ GY+ PE   RQ 
Sbjct: 120 GIIHRDIKPDNILLDEQGHVHITDFNIA----TKVTPDTLTTSTSGTPGYMAPEVLCRQG 175

Query: 693 LTEKSDVYSFGVVLFE 708
            +   D +S GV  +E
Sbjct: 176 YSVAVDWWSLGVTAYE 191

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score =  102 bits (256), Expect = 6e-24
 Identities = 61/229 (26%), Positives = 118/229 (51%), Gaps = 27/229 (11%)

Query: 521 IGVGGFGKVFKGEI---------EDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRH 570
           +G G FG+V   E          E  T+A     +  +E+ L++  +E+EM+  + +H++
Sbjct: 23  LGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 82

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLP--------------PLTWKQRLDA 616
           +++L+G C +   + ++ EY + G LR +L     P               +T+K  +  
Sbjct: 83  IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSC 142

Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
               ARG+ YL   A +  IHRD+   N+L+ EN V K++DFGL++   ++++   +T  
Sbjct: 143 TYQVARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNG 199

Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
           +    ++ PE  + +  T +SDV+SFGV+++E+        P +P +++
Sbjct: 200 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 248

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score =  101 bits (253), Expect = 7e-24
 Identities = 81/264 (30%), Positives = 122/264 (46%), Gaps = 25/264 (9%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           +G G FG V  G+       AIK  +    SE    EF  E +++ KL H  LV L G C
Sbjct: 12  LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMKLSHEKLVQLYGVC 68

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
            +Q  + +V EYM+NG L ++L           Q L+ C     G+ YL +   +  IHR
Sbjct: 69  TKQRPIYIVTEYMSNGCLLNYL-REHGKRFQPSQLLEMCKDVCEGMAYLES---KQFIHR 124

Query: 639 DVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSD 698
           D+   N L+D+    K+SDFGLS+     E+T  S   K    +  PE     + + KSD
Sbjct: 125 DLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLLYSKFSSKSD 183

Query: 699 VYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLE 758
           V++FGV+++EV          +P ++ N ++   K  +   L     PHL         E
Sbjct: 184 VWAFGVLMWEVYSL-----GKMPYERFNNSETVEKVSQGLRLYR---PHLAS-------E 228

Query: 759 KFGEIAEKCLDDEGKNRPTMGEVL 782
           K   I   C  ++ + RPT  ++L
Sbjct: 229 KVYAIMYSCWHEKAEERPTFQQLL 252

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 99.0 bits (247), Expect = 5e-23
 Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 52/283 (18%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIKR-----ANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
           ++G G FG V++G  ++D    A+K           ++ + + E EI +LSKL+H ++V 
Sbjct: 7   LLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQ 66

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLT---WKQRLDACIGAARGLHYLH 628
            +G   E++ + +  E +  G+L   L  +GS   P+     +Q L        GL YLH
Sbjct: 67  YLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILL-------GLEYLH 119

Query: 629 TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST-----AVKGSFGYL 683
              +R  +HRD+K  NIL+D N V K++DFG++K         V       + KGS  ++
Sbjct: 120 ---DRNTVHRDIKGANILVDTNGVVKLADFGMAK--------QVVEFSFAKSFKGSPYWM 168

Query: 684 DPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS 742
            PE   +Q      +D++S G  + E+   +       P  Q+       K  + + L  
Sbjct: 169 APEVIAQQGGYGLAADIWSLGCTVLEMATGKP------PWSQLEGVAAVFKIGRSKELPP 222

Query: 743 IIDPHLKGNYSPESLEKFG-EIAEKCLDDEGKNRPTMGEVLWH 784
           I          P+ L     +   KCL  +   RPT  E+L H
Sbjct: 223 I----------PDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 99.2 bits (248), Expect = 5e-23
 Identities = 74/284 (26%), Positives = 118/284 (41%), Gaps = 53/284 (18%)

Query: 521 IGVGGFGKVFK-GEIEDCTLAAIK-----RANPQSEQGLAEFETEIEMLSKLRHRHLVSL 574
           IG G FG V K     D  +   K         + +Q L    +E+ +L +L+H ++V  
Sbjct: 8   IGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLV---SEVNILRELKHPNIVRY 64

Query: 575 IG-FCDEQNEMI-LVYEYMANGTL-----RSHLFGSDLP-PLTWK---QRLDACIGAARG 623
                D  N+ + +V EY   G L     +       +     W+   Q L A       
Sbjct: 65  YDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLA------- 117

Query: 624 LHYLHTGAERG--IIHRDVKTTNILLDENFVAKMSDFGLSK---TGPSMEHTHVSTAVKG 678
           L+  H  ++ G  ++HRD+K  NI LD N   K+ DFGL+K      S   T+V T    
Sbjct: 118 LYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPY-- 175

Query: 679 SFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR 738
              Y+ PE        EKSD++S G +++E +CA +   P   ++Q+ L           
Sbjct: 176 ---YMSPEQLNHMSYDEKSDIWSLGCLIYE-LCALS--PPFTARNQLQL---------AS 220

Query: 739 SLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
            +K      +   YS E      E+ +  L+ +   RP+  E+L
Sbjct: 221 KIKEGKFRRIPYRYSSE----LNEVIKSMLNVDPDKRPSTEELL 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 97.9 bits (244), Expect = 1e-22
 Identities = 79/282 (28%), Positives = 134/282 (47%), Gaps = 35/282 (12%)

Query: 520 MIGVGGFGKVFKGEIEDC----TLAAIKRANPQSE-QGLAEFETEIEMLSKLRHRHLVSL 574
           +IG G FG V+ G + D        A+K  N  ++ + + +F  E  ++    H +++SL
Sbjct: 2   VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSL 61

Query: 575 IGFC-DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           +G C   +   ++V  YM +G LR+ +      P T K  +   +  A+G+ YL   A +
Sbjct: 62  LGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNP-TVKDLIGFGLQVAKGMEYL---ASK 117

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME------HTHVSTAVKGSFGYLDPEY 687
             +HRD+   N +LDE+F  K++DFGL++     E      HT     VK    ++  E 
Sbjct: 118 KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVK----WMALES 173

Query: 688 FWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH 747
              Q+ T KSDV+SFGV+L+E++   A      P   ++  D  +   + R L       
Sbjct: 174 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVDSFDITVYLLQGRRL------- 221

Query: 748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL 789
           L+  Y P+ L    E+   C   + + RPT  E++  +E + 
Sbjct: 222 LQPEYCPDPLY---EVMLSCWHPKPEMRPTFSELVSRIEQIF 260

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 98.0 bits (245), Expect = 1e-22
 Identities = 76/275 (27%), Positives = 124/275 (45%), Gaps = 38/275 (13%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           +G G  G V+K        + A+K+ +    E+   +   E++ L      ++V   G  
Sbjct: 9   LGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAF 68

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIG--AARGLHYLHTGAERGII 636
            ++ E+ +V EYM  G+L   L           + + A I     +GL YLHT  +R II
Sbjct: 69  YKEGEISIVLEYMDGGSLAD-LLKKVGK---IPEPVLAYIARQILKGLDYLHT--KRHII 122

Query: 637 HRDVKTTNILLDENFVAKMSDFGLSK---TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL 693
           HRD+K +N+L++     K++DFG+SK         +T V T       Y+ PE    +  
Sbjct: 123 HRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVT-----YMSPERIQGESY 177

Query: 694 TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID---PHL-K 749
           +  +D++S G+ L E  CA     P LP  Q +   + +       +++I D   P L  
Sbjct: 178 SYAADIWSLGLTLLE--CALGK-FPFLPPGQPSF--FEL-------MQAICDGPPPSLPA 225

Query: 750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
             +SPE    F +    CL  + K RP+  E+L H
Sbjct: 226 EEFSPE----FRDFISACLQKDPKKRPSAAELLQH 256

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 97.4 bits (242), Expect = 2e-22
 Identities = 82/258 (31%), Positives = 121/258 (46%), Gaps = 23/258 (8%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           +G G FG+V+ G     T  AIK   P +    A F  E +++ KLRH  LV L     E
Sbjct: 14  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 72

Query: 581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER-GIIHRD 639
           +  + +V EYM+ G+L   L G     L   Q +D     A G+ Y+    ER   +HRD
Sbjct: 73  E-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV----ERMNYVHRD 127

Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDV 699
           ++  NIL+ EN V K++DFGL++     E+T      K    +  PE     + T KSDV
Sbjct: 128 LRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDV 186

Query: 700 YSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEK 759
           +SFG++L E+     V  P +   ++   D     Q +R  +    P       PESL  
Sbjct: 187 WSFGILLTELTTKGRVPYPGMVNREV--LD-----QVERGYRMPCPPE-----CPESLH- 233

Query: 760 FGEIAEKCLDDEGKNRPT 777
             ++  +C   E + RPT
Sbjct: 234 --DLMCQCWRKEPEERPT 249

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 96.4 bits (240), Expect = 5e-22
 Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 41/284 (14%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIKRAN-PQSEQG---------LAEFETEIEMLSKLRH 568
           +IG G +G+V+    +    + A+K+   P +  G         +    +EIE L  L H
Sbjct: 8   LIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH 67

Query: 569 RHLVSLIGFCDEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWKQRLDACIGAARG 623
            ++V  +GF   +  + +  EY+  G++ S L     F   L     +Q L        G
Sbjct: 68  LNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVL-------EG 120

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           L YLH+   +GI+HRD+K  N+L+D + + K+SDFG+SK    +     + +++GS  ++
Sbjct: 121 LAYLHS---KGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWM 177

Query: 684 DPE--YFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM-KWQKQRSL 740
            PE  + + Q  + K D++S G V+ E+   R    P   ++ I     AM K   +RS 
Sbjct: 178 APEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR---RPWSDEEAIA----AMFKLGNKRS- 229

Query: 741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
              I P +  N SP +L+        C      NRPT  E+L H
Sbjct: 230 APPIPPDVSMNLSPVALDFLNA----CFTINPDNRPTARELLQH 269

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 96.3 bits (239), Expect = 5e-22
 Identities = 84/267 (31%), Positives = 124/267 (46%), Gaps = 23/267 (8%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           +G G FG+V+ G     T  AIK   P +    A F  E +++ KLRH  LV L     E
Sbjct: 14  LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEA-FLQEAQIMKKLRHDKLVPLYAVVSE 72

Query: 581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER-GIIHRD 639
           +  + +V E+M  G+L   L   D   L   Q +D     A G+ Y+    ER   IHRD
Sbjct: 73  E-PIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYI----ERMNYIHRD 127

Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDV 699
           ++  NIL+ +N V K++DFGL++     E+T      K    +  PE     + T KSDV
Sbjct: 128 LRAANILVGDNLVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDV 186

Query: 700 YSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEK 759
           +SFG++L E+V    V  P +   ++         Q +R  +    P  +G   PESL  
Sbjct: 187 WSFGILLTELVTKGRVPYPGMVNREV-------LEQVERGYRM---PCPQG--CPESLH- 233

Query: 760 FGEIAEKCLDDEGKNRPTMGEVLWHLE 786
             E+ + C   +   RPT   +   LE
Sbjct: 234 --ELMKLCWKKDPDERPTFEYIQSFLE 258

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 95.6 bits (238), Expect = 6e-22
 Identities = 75/270 (27%), Positives = 121/270 (44%), Gaps = 34/270 (12%)

Query: 521 IGVGGFGK-VFKGEIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIG- 576
           +G G FG+       ED +L   K  N    SE+   +   EI +LS L+H ++++    
Sbjct: 8   LGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNH 67

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGII 636
           F D+   +I + EY   GTL   +          +  L         + Y+H   + GI+
Sbjct: 68  FMDDNTLLIEM-EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH---KAGIL 123

Query: 637 HRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEK 696
           HRD+KT NI L +  + K+ DFG+SK   S E++   T V G+  Y+ PE     +   K
Sbjct: 124 HRDIKTLNIFLTKAGLIKLGDFGISKILGS-EYSMAETVV-GTPYYMSPELCQGVKYNFK 181

Query: 697 SDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPE- 755
           SD+++ G VL+E++  +   + T   + +NL    +                +GNY+P  
Sbjct: 182 SDIWALGCVLYELLTLKRTFDAT---NPLNLVVKIV----------------QGNYTPVV 222

Query: 756 ---SLEKFGEIAEKCLDDEGKNRPTMGEVL 782
              S E    +    L  + + RPT  EVL
Sbjct: 223 SVYSSE-LISLVHSLLQQDPEKRPTADEVL 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 95.8 bits (238), Expect = 7e-22
 Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 10/197 (5%)

Query: 520 MIGVGGFGKVFKGEIE----DCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSL 574
           +IG G FG+VF+G ++         AIK   P  +E+   +F +E  ++ +  H +++ L
Sbjct: 12  VIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRL 71

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
            G   +    +++ EYM NG L  +L   D    +  Q +    G A G+ YL   ++  
Sbjct: 72  EGVVTKFKPAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYL---SDMN 127

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVKGSFGYLDPEYFWRQQL 693
            +HRD+   NIL++ N   K+SDFGLS+      E T+ ++  K    +  PE    ++ 
Sbjct: 128 YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKF 187

Query: 694 TEKSDVYSFGVVLFEVV 710
           T  SDV+SFG+V++EV+
Sbjct: 188 TSASDVWSFGIVMWEVM 204

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 95.1 bits (236), Expect = 9e-22
 Identities = 73/264 (27%), Positives = 126/264 (47%), Gaps = 23/264 (8%)

Query: 520 MIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLA-EFETEIEMLSKLRHRHLVSLIGFC 578
           ++G G FG+VFKG ++D T  A+K       Q L  +F +E  +L +  H ++V LIG C
Sbjct: 2   LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC 61

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
            ++  + +V E +  G   S L       L  KQ +   + AA G+ YL +   +  IHR
Sbjct: 62  TQRQPIYIVMELVPGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLES---KNCIHR 117

Query: 639 DVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG-SFGYLDPEYFWRQQLTEKS 697
           D+   N L+ EN V K+SDFG+S+     +  + S+ +K     +  PE     + + +S
Sbjct: 118 DLAARNCLVGENNVLKISDFGMSRQ--EDDGIYSSSGLKQIPIKWTAPEALNYGRYSSES 175

Query: 698 DVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESL 757
           DV+S+G++L+E         P +   Q        + Q ++  +            P+ +
Sbjct: 176 DVWSYGILLWETFSLGVCPYPGMTNQQ-------AREQVEKGYRMSCPQK-----CPDDV 223

Query: 758 EKFGEIAEKCLDDEGKNRPTMGEV 781
            K   + ++C D + +NRP   E+
Sbjct: 224 YK---VMQRCWDYKPENRPKFSEL 244

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 95.0 bits (237), Expect = 1e-21
 Identities = 75/275 (27%), Positives = 122/275 (44%), Gaps = 43/275 (15%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           +G G +G V+K    E   + AIK      E+ L E   EI +L +    ++V   G   
Sbjct: 11  LGEGSYGSVYKAIHKETGQVVAIKVVP--VEEDLQEIIKEISILKQCDSPYIVKYYGSYF 68

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD----ACI--GAARGLHYLHTGAER 633
           +  ++ +V EY   G++      SD+  +T K  L     A I     +GL YLH+    
Sbjct: 69  KNTDLWIVMEYCGAGSV------SDIMKITNK-TLTEEEIAAILYQTLKGLEYLHS---N 118

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST-AVKGSFGYLDPEYFWRQQ 692
             IHRD+K  NILL+E   AK++DFG+S     +  T      V G+  ++ PE      
Sbjct: 119 KKIHRDIKAGNILLNEEGQAKLADFGVSG---QLTDTMAKRNTVIGTPFWMAPEVIQEIG 175

Query: 693 LTEKSDVYSFGVV---LFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK 749
              K+D++S G+    + E     + I+P            A+     +   ++ DP   
Sbjct: 176 YNNKADIWSLGITAIEMAEGKPPYSDIHPMR----------AIFMIPNKPPPTLSDPE-- 223

Query: 750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
             +SPE    F +  +KCL  + + RP+  ++L H
Sbjct: 224 -KWSPE----FNDFVKKCLVKDPEERPSAIQLLQH 253

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 94.7 bits (235), Expect = 1e-21
 Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 12/202 (5%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG-FCD 579
           IG G FG V  G+     +A     N  + Q    F  E  ++++LRH +LV L+G   +
Sbjct: 14  IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIVE 70

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
           E+  + +V EYMA G+L  +L       L     L   +     + YL        +HRD
Sbjct: 71  EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRD 127

Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDV 699
           +   N+L+ E+ VAK+SDFGL+K   S + T      K    +  PE    ++ + KSDV
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTKEASSTQDT-----GKLPVKWTAPEALREKKFSTKSDV 182

Query: 700 YSFGVVLFEVVCARAVINPTLP 721
           +SFG++L+E+     V  P +P
Sbjct: 183 WSFGILLWEIYSFGRVPYPRIP 204

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 94.1 bits (235), Expect = 2e-21
 Identities = 68/193 (35%), Positives = 93/193 (48%), Gaps = 13/193 (6%)

Query: 521 IGVGGFGKVFKGEIEDC-TLAAIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSLI- 575
           +G G FGKV     +D   L A+K    +      E E   TE  +LS++ H  +V L  
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHY 60

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGI 635
            F  E+  + LV EY   G L SHL           +   A I  A  L YLH     GI
Sbjct: 61  AFQTEEK-LYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLA--LEYLH---SLGI 114

Query: 636 IHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTE 695
           I+RD+K  NILLD +   K++DFGL+K   S E +  +T   G+  YL PE    +   +
Sbjct: 115 IYRDLKPENILLDADGHIKLTDFGLAKELSS-EGSRTNTFC-GTPEYLAPEVLLGKGYGK 172

Query: 696 KSDVYSFGVVLFE 708
             D +S GV+L+E
Sbjct: 173 AVDWWSLGVLLYE 185

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 94.2 bits (235), Expect = 4e-21
 Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 40/228 (17%)

Query: 513 NNFDESLMIGVGGFGKVFKG-EIEDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-R 567
           ++F    +IG G F  V    E E     AIK  + +    E+ +   + E E+L++L  
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNG 60

Query: 568 HRHLVSLIG-FCDEQNEMILVYEYMANGTLRSHL--FGS-DLPPLTW--KQRLDACIGAA 621
           H  ++ L   F DE+N +  V EY  NG L  ++  +GS D     +   + L A     
Sbjct: 61  HPGIIKLYYTFQDEEN-LYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLA----- 114

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS--------------M 667
             L YLH+   +GIIHRD+K  NILLD++   K++DFG +K                   
Sbjct: 115 --LEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNID 169

Query: 668 EHTHVSTAVKGSF-G---YLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
                +     SF G   Y+ PE    +   + SD+++ G ++++++ 
Sbjct: 170 SQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLT 217

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 94.7 bits (235), Expect = 4e-21
 Identities = 72/215 (33%), Positives = 111/215 (51%), Gaps = 35/215 (16%)

Query: 520 MIGVGGFGKVFKGEIEDCTL---AAIKRANP-QSEQGLAEFETEIEMLSKL-RHRHLVSL 574
           +IG G FG+V K  I+   L   AAIKR     S+    +F  E+E+L KL  H ++++L
Sbjct: 14  VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 73

Query: 575 IGFCDEQNEMILVYEYMANGTL-----RSHLFGSD---------LPPLTWKQRLDACIGA 620
           +G C+ +  + L  EY  +G L     +S +  +D            L+ +Q L      
Sbjct: 74  LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 133

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSF 680
           ARG+ YL   +++  IHRD+   NIL+ EN+VAK++DFGLS+             VK + 
Sbjct: 134 ARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQ--------EVYVKKTM 182

Query: 681 GYLDPEYFWRQQL-----TEKSDVYSFGVVLFEVV 710
           G L   +   + L     T  SDV+S+GV+L+E+V
Sbjct: 183 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 217

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 93.9 bits (233), Expect = 6e-21
 Identities = 71/215 (33%), Positives = 109/215 (50%), Gaps = 35/215 (16%)

Query: 520 MIGVGGFGKVFKGEIEDCTL---AAIKRANP-QSEQGLAEFETEIEMLSKL-RHRHLVSL 574
           +IG G FG+V +  I+   L   AAIK      SE    +F  E+E+L KL  H ++++L
Sbjct: 9   VIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINL 68

Query: 575 IGFCDEQNEMILVYEYMANGTL-----RSHLFGSD---------LPPLTWKQRLDACIGA 620
           +G C+ +  + +  EY   G L     +S +  +D            LT +Q L      
Sbjct: 69  LGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDV 128

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSF 680
           A G+ YL   +E+  IHRD+   N+L+ EN  +K++DFGLS+     E  +    VK + 
Sbjct: 129 ATGMQYL---SEKQFIHRDLAARNVLVGENLASKIADFGLSRG----EEVY----VKKTM 177

Query: 681 GYLDPEYFWRQQL-----TEKSDVYSFGVVLFEVV 710
           G L   +   + L     T KSDV+SFGV+L+E+V
Sbjct: 178 GRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIV 212

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 93.2 bits (231), Expect = 6e-21
 Identities = 69/257 (26%), Positives = 121/257 (47%), Gaps = 20/257 (7%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           +G G FG+V+ G   + T  A+K   P +   +  F  E  ++  L+H  LV L     +
Sbjct: 14  LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK 72

Query: 581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDV 640
           +  + ++ EYMA G+L   L   +   +   + +D     A G+ Y+     +  IHRD+
Sbjct: 73  EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDL 129

Query: 641 KTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           +  N+L+ E+ + K++DFGL++     E+T    A K    +  PE       T KSDV+
Sbjct: 130 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGA-KFPIKWTAPEAINFGSFTIKSDVW 188

Query: 701 SFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKF 760
           SFG++L+E+V    +  P +    +  A        QR  +    P ++    P+ L   
Sbjct: 189 SFGILLYEIVTYGKIPYPGMSNSDVMSA-------LQRGYRM---PRMEN--CPDELY-- 234

Query: 761 GEIAEKCLDDEGKNRPT 777
            +I + C  ++ + RPT
Sbjct: 235 -DIMKTCWKEKAEERPT 250

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 94.3 bits (234), Expect = 6e-21
 Identities = 57/229 (24%), Positives = 119/229 (51%), Gaps = 27/229 (11%)

Query: 521 IGVGGFGKVFKGEI---------EDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRH 570
           +G G FG+V + E          +  T+A     +  +++ LA+  +E+E++  + +H++
Sbjct: 20  LGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKN 79

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHL---------FGSDLP-----PLTWKQRLDA 616
           +++L+G C ++  + ++ EY A G LR  L         +  D+       L++K  +  
Sbjct: 80  IINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSC 139

Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
               ARG+ YL     R  IHRD+   N+L+ E+ V K++DFGL++    +++   ++  
Sbjct: 140 AYQVARGMEYL---ESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNG 196

Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
           +    ++ PE  + +  T +SDV+SFG++++E+        P +P +++
Sbjct: 197 RLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEEL 245

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 94.3 bits (234), Expect = 6e-21
 Identities = 61/229 (26%), Positives = 118/229 (51%), Gaps = 27/229 (11%)

Query: 521 IGVGGFGKVFKGEI--------EDCTLAAIKR-ANPQSEQGLAEFETEIEMLSKL-RHRH 570
           +G G FG+V   E            T  A+K   +  +E+ L++  +E+EM+  + +H++
Sbjct: 26  LGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 85

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHL-----------FGSDLPP---LTWKQRLDA 616
           +++L+G C +   + ++ EY + G LR +L           +     P   L++K  +  
Sbjct: 86  IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSC 145

Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
               ARG+ YL   A +  IHRD+   N+L+ E+ V K++DFGL++    +++   +T  
Sbjct: 146 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 202

Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
           +    ++ PE  + +  T +SDV+SFGV+L+E+        P +P +++
Sbjct: 203 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 251

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 94.3 bits (234), Expect = 7e-21
 Identities = 60/229 (26%), Positives = 118/229 (51%), Gaps = 27/229 (11%)

Query: 521 IGVGGFGKVFKGEI---------EDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRH 570
           +G G FG+V   E          +  T+A     +  +++ L++  +E+EM+  + +H++
Sbjct: 20  LGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKN 79

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLP--------------PLTWKQRLDA 616
           +++L+G C +   + ++ EY + G LR +L     P               LT+K  +  
Sbjct: 80  IINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSC 139

Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
               ARG+ YL   A +  IHRD+   N+L+ E+ V K++DFGL++   ++++   +T  
Sbjct: 140 AYQVARGMEYL---ASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNG 196

Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
           +    ++ PE  + +  T +SDV+SFGV+L+E+        P +P +++
Sbjct: 197 RLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL 245

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 92.8 bits (231), Expect = 8e-21
 Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 15/202 (7%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQG--LAEFETEIEMLSKLRHRHLVSLIGF 577
           IG G FGKV+    ++   L A+K    Q      + E   E+++L  L+H +LV   G 
Sbjct: 8   IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGV 67

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIH 637
              + ++ +  EY + GTL   L    +      +     +    GL YLH     GI+H
Sbjct: 68  EVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQL--LEGLAYLH---SHGIVH 122

Query: 638 RDVKTTNILLDENFVAKMSDFGLSK---TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
           RD+K  NI LD N V K+ DFG +       +     V +   G+  Y+ PE     +  
Sbjct: 123 RDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLA-GTPAYMAPEVITGGKGK 181

Query: 695 EK---SDVYSFGVVLFEVVCAR 713
                +D++S G V+ E+   +
Sbjct: 182 GHGRAADIWSLGCVVLEMATGK 203

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 92.4 bits (230), Expect = 9e-21
 Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 20/200 (10%)

Query: 521 IGVGGFGKVFKG--------EIEDCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHL 571
           +G G FG V KG        E+E     A+K         G  EF  E  ++++L H  +
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVE----VAVKTLKQEHIAAGKKEFLREASVMAQLDHPCI 58

Query: 572 VSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
           V LIG C  +  ++LV E    G L    +      +      +     A G+ YL    
Sbjct: 59  VRLIGVCKGE-PLMLVMELAPLGPL--LKYLKKRREIPVSDLKELAHQVAMGMAYLE--- 112

Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSK-TGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
            +  +HRD+   N+LL     AK+SDFG+S+  G   ++   +TA +    +  PE    
Sbjct: 113 SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINY 172

Query: 691 QQLTEKSDVYSFGVVLFEVV 710
            + + KSDV+S+GV L+E  
Sbjct: 173 GKFSSKSDVWSYGVTLWEAF 192

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 92.9 bits (231), Expect = 1e-20
 Identities = 65/209 (31%), Positives = 101/209 (48%), Gaps = 34/209 (16%)

Query: 520 MIGVGGFGKVFK---GEIEDCT--LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSL 574
            +G G FG V       ++D T  + A+K+    + + L +FE EIE+L  L+H ++V  
Sbjct: 11  QLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKY 70

Query: 575 IGFCDE--QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA----------CIGAAR 622
            G C    +  + LV EY+  G+LR +L          ++RLD           C    +
Sbjct: 71  KGVCYSAGRRNLRLVMEYLPYGSLRDYLQKH-------RERLDHRKLLLYASQIC----K 119

Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGS--F 680
           G+ YL     +  +HRD+ T NIL++     K+ DFGL+K  P  +  +       S  F
Sbjct: 120 GMEYL---GSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIF 176

Query: 681 GYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
            Y  PE     + +  SDV+SFGVVL+E+
Sbjct: 177 WYA-PESLTESKFSVASDVWSFGVVLYEL 204

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 91.4 bits (227), Expect = 2e-20
 Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 26/266 (9%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFET--EIEMLSKLRHRHLVSLIGF 577
           IG G FG VFK     D  + A+K+ +          E   E  +L+KL   +++     
Sbjct: 8   IGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYES 67

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIH 637
             ++ ++ +V EY  NG L   L      PL   Q     I    GL +LH+   + I+H
Sbjct: 68  FLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS---KKILH 124

Query: 638 RDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEK 696
           RD+K+ N+ LD     K+ D G++K    +   T+ +  + G+  YL PE    +   EK
Sbjct: 125 RDIKSLNLFLDAYDNVKIGDLGVAKLLSDN---TNFANTIVGTPYYLSPELCEDKPYNEK 181

Query: 697 SDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPES 756
           SDV++ GVVL+E    +       P D  N     +K  +         P +   YS + 
Sbjct: 182 SDVWALGVVLYECCTGKH------PFDANNQGALILKIIRGVF------PPVSQMYSQQ- 228

Query: 757 LEKFGEIAEKCLDDEGKNRPTMGEVL 782
                ++ ++CL  + + RP   ++L
Sbjct: 229 ---LAQLIDQCLTKDYRQRPDTFQLL 251

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 91.9 bits (229), Expect = 2e-20
 Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 56/291 (19%)

Query: 512 TNNFDESLMIGVGGFGKVFKG-EIEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRH 568
              +     IG G  G+V+K  +       AIK  R   Q+++ +     EI ++   +H
Sbjct: 18  RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELII---NEILIMKDCKH 74

Query: 569 RHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTW-KQRLDACIGAA------ 621
            ++V         +E+ +V EYM  G+L      +D+  +T    R++    A       
Sbjct: 75  PNIVDYYDSYLVGDELWVVMEYMDGGSL------TDI--ITQNFVRMNEPQIAYVCREVL 126

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS---KTGPSMEHTHVSTAVKG 678
           +GL YLH+   + +IHRD+K+ NILL ++   K++DFG +       S  ++ V T    
Sbjct: 127 QGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPY-- 181

Query: 679 SFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR 738
              ++ PE   R+    K D++S G++  E+        P             ++    R
Sbjct: 182 ---WMAPEVIKRKDYGPKVDIWSLGIMCIEMAEG----EPPY-----------LREPPLR 223

Query: 739 SLKSIID---PHLKG--NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
           +L  I     P LK    +SPE    F +   KCL  + + RP+  E+L H
Sbjct: 224 ALFLITTKGIPPLKNPEKWSPE----FKDFLNKCLVKDPEKRPSAEELLQH 270

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 91.5 bits (227), Expect = 2e-20
 Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 25/212 (11%)

Query: 519 LMIGVGGFGKVFKGEIED----------CTLAAIKRANPQSEQGLAEFETEIEMLSKLRH 568
             +G G FG+V++G   D            +  +++     E+   EF  E  ++S   H
Sbjct: 1   NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEK--KEFLKEAHLMSNFNH 58

Query: 569 RHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDL-----PPLTWKQRLDACIGAARG 623
            ++V L+G C       ++ E M  G L S+L  + +     P LT K+ LD C+  A+G
Sbjct: 59  PNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKG 118

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDE-----NFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
             YL    +   IHRD+   N L+ E     + V K+ DFGL++     ++         
Sbjct: 119 CVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLL 175

Query: 679 SFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
              ++ PE     + T +SDV+SFGV+++E++
Sbjct: 176 PVRWMAPESLLDGKFTTQSDVWSFGVLMWEIL 207

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 91.2 bits (226), Expect = 2e-20
 Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 12/189 (6%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           IG G FG V +GE     +A     N + +     F  E  +++KL H++LV L+G    
Sbjct: 14  IGEGEFGAVLQGEYTGQKVAV---KNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVI-L 69

Query: 581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDV 640
            N + +V E M+ G L + L       ++  Q L   +  A G+ YL +   + ++HRD+
Sbjct: 70  HNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDL 126

Query: 641 KTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
              NIL+ E+ VAK+SDFGL++ G  M   +    VK    +  PE    ++ + KSDV+
Sbjct: 127 AARNILVSEDGVAKVSDFGLARVGS-MGVDNSKLPVK----WTAPEALKHKKFSSKSDVW 181

Query: 701 SFGVVLFEV 709
           S+GV+L+EV
Sbjct: 182 SYGVLLWEV 190

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 91.6 bits (228), Expect = 2e-20
 Identities = 77/286 (26%), Positives = 122/286 (42%), Gaps = 43/286 (15%)

Query: 521 IGVGGFGKVFKGEIEDC------TLAAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVS 573
           +G G FG V++G  +        T  AIK  N  +      EF  E  ++ +    H+V 
Sbjct: 14  LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVR 73

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHL--------FGSDLPPLTWKQRLDACIGAARGLH 625
           L+G        ++V E MA G L+S+L            L P T ++ +      A G+ 
Sbjct: 74  LLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMA 133

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG--YL 683
           YL   A +  +HRD+   N ++ E+   K+ DFG+++     E  +     KG     ++
Sbjct: 134 YL---AAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRD--IYETDYYRKGGKGLLPVRWM 188

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI 743
            PE       T KSDV+SFGVVL+E+          L  +++              LK +
Sbjct: 189 APESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEV--------------LKFV 234

Query: 744 IDPHLKGNY--SPESL-EKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
           ID    G +   PE+  +K  E+   C     K RPT  E++  L+
Sbjct: 235 ID----GGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 91.1 bits (226), Expect = 2e-20
 Identities = 68/198 (34%), Positives = 97/198 (48%), Gaps = 24/198 (12%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAE--FETEIEMLSKLRHRHLVSLIGFC 578
           +G G FG V  G+       AIK  N   E  ++E  F  E +++ KL H  LV L G C
Sbjct: 12  LGSGQFGVVHLGKWRAQIKVAIKAIN---EGAMSEEDFIEEAKVMMKLSHPKLVQLYGVC 68

Query: 579 DEQNEMILVYEYMANGTLRSHL------FGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
            +Q  + +V E+M NG L ++L         D+        L  C     G+ YL    E
Sbjct: 69  TQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDM-------LLSMCQDVCEGMEYL----E 117

Query: 633 R-GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ 691
           R   IHRD+   N L+    V K+SDFG+++     E+T  S A K    +  PE F   
Sbjct: 118 RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGA-KFPVKWSPPEVFNFS 176

Query: 692 QLTEKSDVYSFGVVLFEV 709
           + + KSDV+SFGV+++EV
Sbjct: 177 KYSSKSDVWSFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 91.7 bits (228), Expect = 3e-20
 Identities = 76/270 (28%), Positives = 125/270 (46%), Gaps = 26/270 (9%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           +G G FGKV+K +  E    AA K    +SE+ L +F  EI++LS+ +H ++V L     
Sbjct: 13  LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF 72

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
            +N++ ++ E+   G L S +   +   LT  Q    C      L++LH      +IHRD
Sbjct: 73  YENKLWILIEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLH---SHKVIHRD 128

Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY-----FWRQQLT 694
           +K  NILL  +   K++DFG+S    S       T + G+  ++ PE      F      
Sbjct: 129 LKAGNILLTLDGDVKLADFGVSAKNKSTLQKR-DTFI-GTPYWMAPEVVACETFKDNPYD 186

Query: 695 EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSP 754
            K+D++S G+ L E+    A + P  P  ++N     +K  K     ++  P    +   
Sbjct: 187 YKADIWSLGITLIEL----AQMEP--PHHELNPMRVLLKILKSEP-PTLDQPSKWSS--- 236

Query: 755 ESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                F +  + CL  +  +RPT  E+L H
Sbjct: 237 ----SFNDFLKSCLVKDPDDRPTAAELLKH 262

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 91.9 bits (228), Expect = 3e-20
 Identities = 78/309 (25%), Positives = 124/309 (40%), Gaps = 69/309 (22%)

Query: 521 IGVGGFGKVFKGE---------IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHL 571
           +G G FGKV K                +  +K     SE  L +  +E  +L ++ H H+
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSE--LRDLLSEFNLLKQVNHPHV 65

Query: 572 VSLIGFCDEQNEMILVYEYMANGTLRSHL----------------------FGSDLPPLT 609
           + L G C +   ++L+ EY   G+LRS L                         D   LT
Sbjct: 66  IKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALT 125

Query: 610 WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH 669
               +      +RG+ YL   AE  ++HRD+   N+L+ E    K+SDFGLS+     + 
Sbjct: 126 MGDLISFAWQISRGMQYL---AEMKLVHRDLAARNVLVAEGRKMKISDFGLSR-----DV 177

Query: 670 THVSTAVKGSFG-----YLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ 724
               + VK S G     ++  E  +    T +SDV+SFGV+L+E+V       P +  ++
Sbjct: 178 YEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER 237

Query: 725 INLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGE----IAEKCLDDEGKNRPTMGE 780
           +    + +               LK  Y  E  E   E    +   C   E   RPT  +
Sbjct: 238 L----FNL---------------LKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFAD 278

Query: 781 VLWHLEYVL 789
           +   LE ++
Sbjct: 279 ISKELEKMM 287

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 90.7 bits (225), Expect = 3e-20
 Identities = 62/190 (32%), Positives = 93/190 (48%), Gaps = 6/190 (3%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           +G G FG+V+ G     T  AIK     S    A F  E  ++ +L+H  LV L      
Sbjct: 14  LGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEA-FLAEANLMKQLQHPRLVRLYAVV-T 71

Query: 581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDV 640
           Q  + ++ EYM NG+L   L   +   LT  + +D     A G+ ++     +  IHRD+
Sbjct: 72  QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDL 128

Query: 641 KTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           +  NIL+ E    K++DFGL++     E+T    A K    +  PE       T KSDV+
Sbjct: 129 RAANILVSETLCCKIADFGLARLIEDNEYTAREGA-KFPIKWTAPEAINYGTFTIKSDVW 187

Query: 701 SFGVVLFEVV 710
           SFG++L E+V
Sbjct: 188 SFGILLTEIV 197

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 90.6 bits (225), Expect = 4e-20
 Identities = 71/279 (25%), Positives = 121/279 (43%), Gaps = 48/279 (17%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRAN--PQSEQGLAEFETEIEMLSKLRHRHLVS---- 573
           +G G +G V+K + + D    A+K  +    S++   +   EI +L+ + H +++S    
Sbjct: 8   LGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEA 67

Query: 574 -LIGFCDEQNEMILVYEYMANGTL-----RSHLFGSDLPP-LTWKQRLDACIGAARGLHY 626
            L G     N++ +V EY   G L     +       +P    W+  +       RGL  
Sbjct: 68  FLDG-----NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLL----RGLQA 118

Query: 627 LHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDP 685
           LH   E+ I+HRD+K+ NILL  N + K+ D G+SK     M  T + T       Y+ P
Sbjct: 119 LH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPH-----YMAP 170

Query: 686 EYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           E +  +  + KSD++S G +L+E +   A      P +  ++ D   K Q+ +       
Sbjct: 171 EVWKGRPYSYKSDIWSLGCLLYE-MATFAP-----PFEARSMQDLRYKVQRGKY------ 218

Query: 746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
           P +   YS +            L  + K RP   ++L  
Sbjct: 219 PPIPPIYSQD----LQNFIRSMLQVKPKLRPNCDKILAS 253

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 91.3 bits (227), Expect = 5e-20
 Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 30/216 (13%)

Query: 521 IGVGGFGKVFKGEIED-----------------CTLAAIKRANP-QSEQGLAEFETEIEM 562
           +G G FG+V   E +                    L A+K   P  S+    +F  E+++
Sbjct: 13  LGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKI 72

Query: 563 LSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT----LRSHLFGSDLPPLTWKQRLDAC- 617
           LS+L   ++  L+G C     + ++ EYM NG     L+ H+  +       K    +  
Sbjct: 73  LSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTL 132

Query: 618 --IGA--ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS 673
             +    A G+ YL        +HRD+ T N L+ +N+  K++DFG+S+   S ++  V 
Sbjct: 133 LYMATQIASGMRYL---ESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQ 189

Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
                   ++  E     + T KSDV++FGV L+E+
Sbjct: 190 GRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEI 225

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 90.6 bits (225), Expect = 5e-20
 Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 38/214 (17%)

Query: 521 IGVGGFGKVFKGEI-------EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
           +G G FG+V++G          +  +A        SEQ  ++F  E  ++SK  H+++V 
Sbjct: 14  LGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVR 73

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGS----DLP-PLTWKQRLDACIGAARGLHYLH 628
           LIG   E+    ++ E MA G L+S L  +    + P  LT K  L      A+G  YL 
Sbjct: 74  LIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE 133

Query: 629 TGAERGIIHRDVKTTNILLD---ENFVAKMSDFGLS----------KTGPSMEHTHVSTA 675
              E   IHRD+   N LL       VAK++DFG++          K G +M        
Sbjct: 134 ---ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAM------LP 184

Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           +K    ++ PE F     T K+DV+SFGV+L+E+
Sbjct: 185 IK----WMPPEAFLDGIFTSKTDVWSFGVLLWEI 214

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 90.6 bits (225), Expect = 5e-20
 Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 23/202 (11%)

Query: 520 MIGVGGFGKVFKG----EIEDCTLA-AIKR-ANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
           ++G G FG V+KG    E E   +  AIK      S +   E   E  +++ + H H+V 
Sbjct: 14  VLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVR 73

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPLTWKQRLDACIGAARGLHYL 627
           L+G C    ++ L+ + M  G L  ++       GS       +  L+ C+  A+G+ YL
Sbjct: 74  LLGICLSS-QVQLITQLMPLGCLLDYVRNHKDNIGS-------QYLLNWCVQIAKGMSYL 125

Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY 687
               E+ ++HRD+   N+L+      K++DFGL+K     E  + +   K    ++  E 
Sbjct: 126 E---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALES 182

Query: 688 FWRQQLTEKSDVYSFGVVLFEV 709
              +  T KSDV+S+GV ++E+
Sbjct: 183 ILHRIYTHKSDVWSYGVTVWEL 204

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 90.1 bits (223), Expect = 6e-20
 Identities = 66/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           +G G FG+V+ G     T  A+K   P +    + F  E +++ KLRH  LV L     E
Sbjct: 14  LGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPES-FLEEAQIMKKLRHDKLVQLYAVVSE 72

Query: 581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER-GIIHRD 639
           +  + +V EYM+ G+L   L   +   L     +D     A G+ Y+    ER   IHRD
Sbjct: 73  E-PIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI----ERMNYIHRD 127

Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDV 699
           +++ NIL+ +  V K++DFGL++     E+T    A K    +  PE     + T KSDV
Sbjct: 128 LRSANILVGDGLVCKIADFGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDV 186

Query: 700 YSFGVVLFEVVCARAVINPTL 720
           +SFG++L E+V    V  P +
Sbjct: 187 WSFGILLTELVTKGRVPYPGM 207

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 90.0 bits (224), Expect = 6e-20
 Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 21/204 (10%)

Query: 521 IGVGGFGKVF---KGEIEDC-TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLI- 575
           I  G +G+VF   K    D   +  IK+A+   +  + +  TE ++LS+ +  ++V L  
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYY 60

Query: 576 GFCDEQNEMILVYEYMANGTLRS--HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
            F  ++N + LV EY+  G L S     GS L     +  + A I  A  L YLH     
Sbjct: 61  SFQGKKN-LYLVMEYLPGGDLASLLENVGS-LDEDVARIYI-AEIVLA--LEYLH---SN 112

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK------GSFGYLDPEY 687
           GIIHRD+K  NIL+D N   K++DFGLSK G      +++   K      G+  Y+ PE 
Sbjct: 113 GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEV 172

Query: 688 FWRQQLTEKSDVYSFGVVLFEVVC 711
              Q  ++  D +S G +L+E + 
Sbjct: 173 ILGQGHSKTVDWWSLGCILYEFLV 196

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 89.6 bits (222), Expect = 8e-20
 Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 28/212 (13%)

Query: 514 NFDESLMIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHR 569
            ++    IG G FGK++    K + E C +  I       ++  A  + E+ +L+K++H 
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEAS-KKEVILLAKMKHP 59

Query: 570 HLVSLIGFCDEQNEMILVYEYMANGTL-------RSHLFGSDLPPLTWKQRLDACIGAAR 622
           ++V+      E   + +V EY   G L       R  LF  D       Q L   +  + 
Sbjct: 60  NIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSED-------QILSWFVQISL 112

Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDEN-FVAKMSDFGLSKT-GPSMEHTHVSTAVKGSF 680
           GL ++H   +R I+HRD+K+ NI L +N  VAK+ DFG+++    SME   ++    G+ 
Sbjct: 113 GLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME---LAYTCVGTP 166

Query: 681 GYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
            YL PE    +    K+D++S G VL+E +C 
Sbjct: 167 YYLSPEICQNRPYNNKTDIWSLGCVLYE-LCT 197

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 90.0 bits (223), Expect = 9e-20
 Identities = 77/274 (28%), Positives = 119/274 (43%), Gaps = 32/274 (11%)

Query: 521 IGVGGFGKVF--------KGEIEDCTLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHL 571
           +G G FGKV          G  E   +  +KR    Q+  G   ++ EI +L  L H ++
Sbjct: 12  LGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSG---WKKEINILKTLYHENI 68

Query: 572 VSLIGFCDEQNEMI--LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHT 629
           V   G C EQ      L+ EY+  G+LR +L    L      Q L        G+ YLH+
Sbjct: 69  VKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKL---NLAQLLLFAQQICEGMAYLHS 125

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYF 688
              +  IHRD+   N+LLD + + K+ DFGL+K  P   E+  V         +   E  
Sbjct: 126 ---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECL 182

Query: 689 WRQQLTEKSDVYSFGVVLFEVV--CARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP 746
              + +  SDV+SFGV L+E++  C      P   ++ I         Q Q ++  +I+ 
Sbjct: 183 KENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPK------QGQMTVVRLIEL 236

Query: 747 HLKGNYSP---ESLEKFGEIAEKCLDDEGKNRPT 777
             +G   P      ++   + + C + E K RPT
Sbjct: 237 LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPT 270

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 88.9 bits (220), Expect = 1e-19
 Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 14/210 (6%)

Query: 521 IGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGL-AEFETEIEMLSKLRHRHLVSLIGFC 578
           IG G FG+VF G +  D T  A+K         L A+F  E  +L +  H ++V LIG C
Sbjct: 3   IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 62

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
            ++  + +V E +  G   + L  ++ P L  K+ +     AA G+ YL +   +  IHR
Sbjct: 63  TQKQPIYIVMELVQGGDFLTFL-RTEGPRLKVKELIQMVENAAAGMEYLES---KHCIHR 118

Query: 639 DVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG----SFGYLDPEYFWRQQLT 694
           D+   N L+ E  V K+SDFG+S+     E   V  +  G       +  PE     + +
Sbjct: 119 DLAARNCLVTEKNVLKISDFGMSRE----EEDGVYASTGGMKQIPVKWTAPEALNYGRYS 174

Query: 695 EKSDVYSFGVVLFEVVCARAVINPTLPKDQ 724
            +SDV+SFG++L+E     AV    L   Q
Sbjct: 175 SESDVWSFGILLWEAFSLGAVPYANLSNQQ 204

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 89.5 bits (223), Expect = 1e-19
 Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 20/153 (13%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQSE-QGLAEFET-EIEMLSKLRHRHLVSLIGF 577
           IG G +G+V+K    +   L A+K+   ++E +G       EI++L KLRH ++V L   
Sbjct: 7   IGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEI 66

Query: 578 C--DEQNEMILVYEYMA---NGTLRSHLFGSDLPPLT--WKQRLDACIGAARGLHYLHTG 630
                +  + +V+EYM     G L S         +    KQ L        GL YLH  
Sbjct: 67  VTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLL-------EGLQYLH-- 117

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKT 663
              GI+HRD+K +NIL++ + V K++DFGL++ 
Sbjct: 118 -SNGILHRDIKGSNILINNDGVLKLADFGLARP 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|221187 pfam11721, Malectin, Di-glucose binding within endoplasmic reticulum

 Score = 86.2 bits (214), Expect = 2e-19
 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 20/159 (12%)

Query: 219 TMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAGSEIRNSSNITYASTNDSSVAPLL 278
            +  +N GGPE   S        +EAD+ +   +        + + + A T D  +    
Sbjct: 1   VVLAINCGGPEHTDSDG----ITYEADTYFTGGSADYYVSDTNGSSSIAGTTDPEL---- 52

Query: 279 VYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVYEKA--NQRIFRIYINNR 336
            Y+T R  S +       + S+      N +Y V LHF E+ + +    +R+F +Y+  +
Sbjct: 53  -YQTER-YSPS-------SFSYYIPCLENGNYTVILHFAEIYFGEDGLGRRVFDVYVQGK 103

Query: 337 TAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQLG 375
               +FDI  +AGGK +  H++Y     +   TL I   
Sbjct: 104 LVLKDFDIVAEAGGKGKTAHKEYIPVTVTD-GTLEIHFY 141

Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. Length = 164

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 88.4 bits (219), Expect = 2e-19
 Identities = 59/197 (29%), Positives = 102/197 (51%), Gaps = 10/197 (5%)

Query: 520 MIGVGGFGKVFKGEIE-----DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSL 574
           +IG G FG+V  G ++     +  +A        +E+   +F +E  ++ +  H +++ L
Sbjct: 11  VIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHL 70

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
            G   +   +++V EYM NG+L + L   D    T  Q +    G A G+ YL   ++ G
Sbjct: 71  EGVVTKSKPVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYL---SDMG 126

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVKGSFGYLDPEYFWRQQL 693
            +HRD+   NIL++ N V K+SDFGLS+      E  + +   K    +  PE    ++ 
Sbjct: 127 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 186

Query: 694 TEKSDVYSFGVVLFEVV 710
           T  SDV+S+G+V++EV+
Sbjct: 187 TSASDVWSYGIVMWEVM 203

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 88.2 bits (218), Expect = 3e-19
 Identities = 72/215 (33%), Positives = 113/215 (52%), Gaps = 35/215 (16%)

Query: 520 MIGVGGFGKVFKGEIEDCTL---AAIKRANP-QSEQGLAEFETEIEMLSKL-RHRHLVSL 574
           +IG G FG+V K  I+   L   AAIKR     S+    +F  E+E+L KL  H ++++L
Sbjct: 2   VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 61

Query: 575 IGFCDEQNEMILVYEYMANGTL-----RSHLFGSD---------LPPLTWKQRLDACIGA 620
           +G C+ +  + L  EY  +G L     +S +  +D            L+ +Q L      
Sbjct: 62  LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 121

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSF 680
           ARG+ YL   +++  IHRD+   NIL+ EN+VAK++DFGLS+     +  +    VK + 
Sbjct: 122 ARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRG----QEVY----VKKTM 170

Query: 681 GYLDPEYFWRQQL-----TEKSDVYSFGVVLFEVV 710
           G L   +   + L     T  SDV+S+GV+L+E+V
Sbjct: 171 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 205

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 87.9 bits (218), Expect = 4e-19
 Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 34/286 (11%)

Query: 520 MIGVGGFGKVFKGEI--EDCTL--AAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
           ++G G FG V +G++  +D +    A+K  + +  +   + EF +E   +    H +++ 
Sbjct: 6   ILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMK 65

Query: 574 LIGFCDEQNEM------ILVYEYMANGTLRSHLFGS---DLPP-LTWKQRLDACIGAARG 623
           LIG C E + +      +++  +M +G L S L  S    LP  L  +  L   +  A G
Sbjct: 66  LIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALG 125

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           + YL     R  IHRD+   N +L E+    ++DFGLSK   S ++       K    ++
Sbjct: 126 MEYLSN---RNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 182

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI 743
             E    +  T KSDV++FGV ++E+        P +   +I        +   R    +
Sbjct: 183 AIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEI--------YDYLRHGNRL 234

Query: 744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL 789
             P        + L++  ++   C   + K+RPT  ++   LE +L
Sbjct: 235 KQP-------EDCLDELYDLMYSCWRADPKDRPTFTKLREVLENIL 273

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 87.7 bits (218), Expect = 4e-19
 Identities = 79/279 (28%), Positives = 123/279 (44%), Gaps = 44/279 (15%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           IG G +G V+K  +I    L AIK    +        + EI ML + RH ++V+  G   
Sbjct: 11  IGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYL 70

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
            ++++ +V EY   G+L   ++     PL+  Q    C    +GL YLH   E G IHRD
Sbjct: 71  RRDKLWIVMEYCGGGSL-QDIYQVTRGPLSELQIAYVCRETLKGLAYLH---ETGKIHRD 126

Query: 640 VKTTNILLDENFVAKMSDFGLS---KTGPSMEHTHVST---------AVKGSFGYLDPEY 687
           +K  NILL E+   K++DFG+S       +   + + T         AV+   GY     
Sbjct: 127 IKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGY----- 181

Query: 688 FWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH 747
                   K D+++ G+   E+    A + P +     +L    M+     S  +   P 
Sbjct: 182 ------DGKCDIWALGITAIEL----AELQPPM----FDLH--PMRALFLISKSNFPPPK 225

Query: 748 L--KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
           L  K  +SP     F +  +KCL  + K RPT  ++L H
Sbjct: 226 LKDKEKWSP----VFHDFIKKCLTKDPKKRPTATKLLQH 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 88.6 bits (219), Expect = 4e-19
 Identities = 75/270 (27%), Positives = 128/270 (47%), Gaps = 26/270 (9%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           +G G FGKV+K +  E   LAA K    +SE+ L ++  EIE+L+   H ++V L+G   
Sbjct: 20  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY 79

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
              ++ ++ E+   G + + +   D   LT  Q    C      L YLH+     IIHRD
Sbjct: 80  WDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHS---MKIIHRD 135

Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTE---- 695
           +K  N+LL  +   K++DFG+S    +++      +  G+  ++ PE    + + +    
Sbjct: 136 LKAGNVLLTLDGDIKLADFGVS--AKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYD 193

Query: 696 -KSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSP 754
            K+D++S G+ L E+    A I P  P  ++N     +K  K        +P      S 
Sbjct: 194 YKADIWSLGITLIEM----AQIEP--PHHELNPMRVLLKIAKS-------EPPTLSQPSK 240

Query: 755 ESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
            S+E F +  +  LD   + RP+  ++L H
Sbjct: 241 WSME-FRDFLKTALDKHPETRPSAAQLLEH 269

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 87.2 bits (216), Expect = 7e-19
 Identities = 79/287 (27%), Positives = 131/287 (45%), Gaps = 51/287 (17%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIKRA--NPQSEQG-------LAEFETEIEMLSKLRHR 569
           +IG G FG V+ G       L A+K+      S          L     EI +L +L+H 
Sbjct: 7   LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHE 66

Query: 570 HLVSLIGFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTW---KQRLDACIGAARGL 624
           ++V  +G   + + + +  EY+  G++ + L  +G+    L     +Q L       +GL
Sbjct: 67  NIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQIL-------KGL 119

Query: 625 HYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA-------VK 677
           +YLH    RGIIHRD+K  NIL+D     K+SDFG+SK    +E   +ST        ++
Sbjct: 120 NYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISK---KLEANSLSTKTNGARPSLQ 173

Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ 737
           GS  ++ PE   +   T K+D++S G ++ E++  +   +P     Q+         Q  
Sbjct: 174 GSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGK---HPFPDCTQL---------QAI 221

Query: 738 RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
             +     P +  N S E++    +  EK  + +   RPT  E+L H
Sbjct: 222 FKIGENASPEIPSNISSEAI----DFLEKTFEIDHNKRPTAAELLKH 264

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 86.9 bits (216), Expect = 9e-19
 Identities = 81/280 (28%), Positives = 125/280 (44%), Gaps = 51/280 (18%)

Query: 520 MIGVGGFGKVFKGEIEDC-TLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
            IG G FG+V+K   +    + AIK  +  ++E  + + + EI+ LS+ R  ++    G 
Sbjct: 8   CIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGS 67

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD----ACI--GAARGLHYLHTGA 631
             + +++ ++ EY   G+            L    +LD    A I      GL YLH   
Sbjct: 68  FLKGSKLWIIMEYCGGGSCLD---------LLKPGKLDETYIAFILREVLLGLEYLH--- 115

Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV--STAVKGSFGYLDPEYFW 689
           E G IHRD+K  NILL E    K++DFG+S     +  T    +T V   F ++ PE   
Sbjct: 116 EEGKIHRDIKAANILLSEEGDVKLADFGVSG---QLTSTMSKRNTFVGTPF-WMAPEVIK 171

Query: 690 RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADW-AMKWQKQRSLKSIID--- 745
           +    EK+D++S G+   E           L K +  L+D   M     R L  I     
Sbjct: 172 QSGYDEKADIWSLGITAIE-----------LAKGEPPLSDLHPM-----RVLFLIPKNNP 215

Query: 746 PHLKGN-YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
           P L+GN +S      F +    CL+ + K RP+  E+L H
Sbjct: 216 PSLEGNKFSKP----FKDFVSLCLNKDPKERPSAKELLKH 251

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 87.0 bits (215), Expect = 1e-18
 Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 26/224 (11%)

Query: 507 EIRVATNNFDESLMIGVGGFGKVFKGEI-----EDCTLAAIKR-ANPQSEQGLAEFETEI 560
           E+ ++   F E L  G   FGK++KG +     +   L AIK   +  + Q   EF+ E 
Sbjct: 1   ELPLSAVRFMEEL--GECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEA 58

Query: 561 EMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLF---------------GSDL 605
            ++++L H ++V L+G   ++  + +++EY+  G L   L                G+  
Sbjct: 59  SLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVK 118

Query: 606 PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP 665
             L     L   I  A G+ YL   +    +H+D+   NIL+ E    K+SD GLS+   
Sbjct: 119 SSLDHGDFLHIAIQIAAGMEYL---SSHFFVHKDLAARNILIGEQLHVKISDLGLSREIY 175

Query: 666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           S ++  V         ++ PE     + +  SD++SFGVVL+E+
Sbjct: 176 SADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 86.3 bits (214), Expect = 1e-18
 Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)

Query: 521 IGVGGFGKVFKGEIEDCTL----AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLI 575
           +G G FG V +GE           A+K          + +F  E  ++  L H +L+ L 
Sbjct: 3   LGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLY 62

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGI 635
           G     + +++V E    G+L   L    L         D  +  A G+ YL +   +  
Sbjct: 63  GVV-LTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES---KRF 118

Query: 636 IHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA-VKGSFGYLDPEYFWRQQLT 694
           IHRD+   NILL  +   K+ DFGL +  P  E  +V    +K  F +  PE    +  +
Sbjct: 119 IHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFS 178

Query: 695 EKSDVYSFGVVLFEV 709
             SDV+ FGV L+E+
Sbjct: 179 HASDVWMFGVTLWEM 193

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 86.7 bits (215), Expect = 1e-18
 Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 42/243 (17%)

Query: 559 EIEMLSKLRHRHLVSLIG-FCDEQNEMI-LVYEYMANGTLRSHLFGSDLPPLTWKQ--RL 614
           E+E+    +  ++V   G F DE +  I +  EY   G+L S           +K+  + 
Sbjct: 49  ELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDS----------IYKKVKKR 98

Query: 615 DACIG----------AARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KT 663
              IG            +GL YLH    R IIHRD+K +NILL      K+ DFG+S + 
Sbjct: 99  GGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGEL 155

Query: 664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
             S+  T   T    SF Y+ PE    +  +  SDV+S G+ L EV   R    P  P+ 
Sbjct: 156 VNSLAGTFTGT----SF-YMAPERIQGKPYSITSDVWSLGLTLLEVAQNRF---PFPPEG 207

Query: 724 QINLA--DWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEV 781
           +  L   +         + +   +P     +S    E+F +  ++CL+ +   RPT  ++
Sbjct: 208 EPPLGPIELLSYIVNMPNPELKDEPGNGIKWS----EEFKDFIKQCLEKDPTRRPTPWDM 263

Query: 782 LWH 784
           L H
Sbjct: 264 LEH 266

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 85.7 bits (212), Expect = 2e-18
 Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 27/206 (13%)

Query: 520 MIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLA------EFETEIEMLSKLRHRHLVS 573
           ++G G +G V+ G      L A+K+    +   LA      + + E+++L  L+H ++V 
Sbjct: 7   VLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQ 66

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTW----KQRLDACIGAARGLHYL 627
            +G C + N + +  E++  G++ S L  FG  LP   +    KQ LD       G+ YL
Sbjct: 67  YLGTCLDDNTISIFMEFVPGGSISSILNRFGP-LPEPVFCKYTKQILD-------GVAYL 118

Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK----TGPSMEHTHVSTAVKGSFGYL 683
           H      ++HRD+K  N++L  N + K+ DFG ++     G    H+++  ++ G+  ++
Sbjct: 119 H---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWM 175

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFEV 709
            PE         KSD++S G  +FE+
Sbjct: 176 APEVINESGYGRKSDIWSIGCTVFEM 201

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 86.2 bits (213), Expect = 2e-18
 Identities = 77/270 (28%), Positives = 128/270 (47%), Gaps = 26/270 (9%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           +G G FGKV+K +  E   LAA K  + +SE+ L ++  EI++L+   H ++V L+    
Sbjct: 13  LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 72

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
            +N + ++ E+ A G + + +   +  PLT  Q    C      L+YLH   E  IIHRD
Sbjct: 73  YENNLWILIEFCAGGAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLH---ENKIIHRD 128

Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTE---- 695
           +K  NIL   +   K++DFG+S    +        +  G+  ++ PE    +   +    
Sbjct: 129 LKAGNILFTLDGDIKLADFGVS--AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 186

Query: 696 -KSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSP 754
            K+DV+S G+ L E+    A I P  P  ++N     +K  K     ++  P     +S 
Sbjct: 187 YKADVWSLGITLIEM----AQIEP--PHHELNPMRVLLKIAKSEP-PTLAQP---SRWSS 236

Query: 755 ESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
           E    F +  +KCL+     R T  ++L H
Sbjct: 237 E----FKDFLKKCLEKNVDARWTTTQLLQH 262

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 85.7 bits (212), Expect = 2e-18
 Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 18/202 (8%)

Query: 520 MIGVGGFGKVFKGEIEDC----TLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSL 574
           +IG G FG+V +G ++         AIK      +E+   +F +E  ++ +  H +++ L
Sbjct: 11  VIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHL 70

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
            G   +   ++++ E+M NG L S L  +D    T  Q +    G A G+ YL   +E  
Sbjct: 71  EGVVTKSRPVMIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYL---SEMN 126

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG------YLDPEYF 688
            +HRD+   NIL++ N V K+SDFGLS+    +E          S G      +  PE  
Sbjct: 127 YVHRDLAARNILVNSNLVCKVSDFGLSRF---LEDDTSDPTYTSSLGGKIPIRWTAPEAI 183

Query: 689 WRQQLTEKSDVYSFGVVLFEVV 710
             ++ T  SDV+S+G+V++EV+
Sbjct: 184 AYRKFTSASDVWSYGIVMWEVM 205

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 85.3 bits (211), Expect = 3e-18
 Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 8/191 (4%)

Query: 521 IGVGGFGKVFKG--EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           +G G +G+V++G  +    T+A   +   +    + EF  E  ++ +++H +LV L+G C
Sbjct: 14  LGGGQYGEVYEGVWKKYSLTVAV--KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 71

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
             +    ++ E+M  G L  +L   +   +     L      +  + YL    ++  IHR
Sbjct: 72  TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 128

Query: 639 DVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSD 698
           D+   N L+ EN + K++DFGLS+      +T  + A K    +  PE     + + KSD
Sbjct: 129 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA-KFPIKWTAPESLAYNKFSIKSD 187

Query: 699 VYSFGVVLFEV 709
           V++FGV+L+E+
Sbjct: 188 VWAFGVLLWEI 198

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 85.2 bits (211), Expect = 4e-18
 Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 16/201 (7%)

Query: 521 IGVGGFGKVFKGEIEDC-TLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           +G GGFG+V   +++    + A K+ + +     +G      E ++L K+  R +VSL  
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAY 60

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAER 633
             + ++++ LV   M  G L+ H++    P         A   AA+   GL +LH   +R
Sbjct: 61  AFETKDDLCLVMTLMNGGDLKYHIYNVGEPGF---PEARAIFYAAQIICGLEHLH---QR 114

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL 693
            I++RD+K  N+LLD++   ++SD GL+      +         G+ GY+ PE    +  
Sbjct: 115 RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRA---GTPGYMAPEVLQGEVY 171

Query: 694 TEKSDVYSFGVVLFEVVCARA 714
               D ++ G  L+E++  R+
Sbjct: 172 DFSVDWFALGCTLYEMIAGRS 192

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 84.1 bits (209), Expect = 9e-18
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 26/165 (15%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKR-ANPQSEQGLAEFET---EIEMLSKLRHRHLVSLI 575
           +G G +G V+K  + +   + A+K+      E+G+    T   EI +L +L+H ++V L+
Sbjct: 7   LGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGI--PSTALREISLLKELKHPNIVKLL 64

Query: 576 GFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWK----QRLDACIGAARGLHYLHT 629
                + ++ LV+EY     L+ +L      L P   K    Q L       RGL Y H+
Sbjct: 65  DVIHTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLL-------RGLAYCHS 116

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSK--TGPSMEHTHV 672
                I+HRD+K  NIL++ + V K++DFGL++    P   +TH 
Sbjct: 117 ---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE 158

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 82.2 bits (203), Expect = 3e-17
 Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 26/215 (12%)

Query: 513 NNFDESLMIGVGGFGKVFKGEIEDC--TLAA----IKRANPQSEQGLAEFETEIEMLSKL 566
            N+    ++G G FG+V+     D    LA         +P++++ +   E EI++L  L
Sbjct: 2   TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL 61

Query: 567 RHRHLVSLIGFCDEQNEMILVY-EYMANGTLRSHL--FGSDLPPLTWK---QRLDACIGA 620
           +H  +V   G C   +E + ++ EYM  G+++  L  +G+    +T K   Q L+     
Sbjct: 62  QHERIVQYYG-CLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILE----- 115

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS--MEHTHVSTAVKG 678
             G+ YLH+     I+HRD+K  NIL D     K+ DFG SK   +     T + + V G
Sbjct: 116 --GVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKS-VTG 169

Query: 679 SFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           +  ++ PE    +    K+DV+S G  + E++  +
Sbjct: 170 TPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEK 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 82.3 bits (203), Expect = 4e-17
 Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 23/204 (11%)

Query: 521 IGVGGFGKVFKGEIEDC----------TLAAIKRANPQS-EQGLAEFETEIEMLSKLRHR 569
           +G G FGKV     E C             A+K   P+S    +A+ + EIE+L  L H 
Sbjct: 12  LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 66

Query: 570 HLVSLIGFCDEQ--NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYL 627
           ++V   G C E   N + L+ E++ +G+L+ +L   +   +  KQ+L   +   +G+ YL
Sbjct: 67  NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PRNKNKINLKQQLKYAVQICKGMDYL 125

Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVKGSFGYLDPE 686
                R  +HRD+   N+L++     K+ DFGL+K      E+  V   +     +  PE
Sbjct: 126 ---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPE 182

Query: 687 YFWRQQLTEKSDVYSFGVVLFEVV 710
              + +    SDV+SFGV L+E++
Sbjct: 183 CLIQSKFYIASDVWSFGVTLYELL 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 81.4 bits (201), Expect = 6e-17
 Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 35/279 (12%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIKRA----NPQSEQG--LAEFETEIEMLSKLRHRHLV 572
            +G G F   ++  +++  TL A+K+     N  SEQ   +     EI ++++L H H++
Sbjct: 7   QLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHII 66

Query: 573 SLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
            ++G   E +   L  E+MA G++   L  S          ++      RGL YLH   E
Sbjct: 67  RMLGATCEDSHFNLFVEWMAGGSVSHLL--SKYGAFKEAVIINYTEQLLRGLSYLH---E 121

Query: 633 RGIIHRDVKTTNILLDEN-FVAKMSDFGLSKTGPSMEHTHVSTA-----VKGSFGYLDPE 686
             IIHRDVK  N+L+D      +++DFG       +             + G+  ++ PE
Sbjct: 122 NQIIHRDVKGANLLIDSTGQRLRIADFG---AAARLAAKGTGAGEFQGQLLGTIAFMAPE 178

Query: 687 YFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP 746
               +Q     DV+S G V+ E+  A+   N     + + L     K     +  SI   
Sbjct: 179 VLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLAL---IFKIASATTAPSI--- 232

Query: 747 HLKGNYSPESLEK-FGEIAEKCLDDEGKNRPTMGEVLWH 784
                  PE L     ++  +CL+ + ++RP   E+L H
Sbjct: 233 -------PEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 81.3 bits (201), Expect = 6e-17
 Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 27/203 (13%)

Query: 520 MIGVGGFGKVFKG---EIEDCTLA-AIKRANPQSEQGLAE-FETEIEMLSKLRHRHLVSL 574
            IG G FG V++G     E+  +A A+K     +   + E F  E  ++ +  H H+V L
Sbjct: 13  CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL 72

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA------CIGAARGLHYLH 628
           IG   E N + +V E    G LRS+L          K  LD           +  L YL 
Sbjct: 73  IGVITE-NPVWIVMELAPLGELRSYL-------QVNKYSLDLASLILYSYQLSTALAYLE 124

Query: 629 TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSF--GYLDPE 686
           +   +  +HRD+   N+L+      K+ DFGLS+    +E      A KG     ++ PE
Sbjct: 125 S---KRFVHRDIAARNVLVSSPDCVKLGDFGLSR---YLEDESYYKASKGKLPIKWMAPE 178

Query: 687 YFWRQQLTEKSDVYSFGVVLFEV 709
               ++ T  SDV+ FGV ++E+
Sbjct: 179 SINFRRFTSASDVWMFGVCMWEI 201

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 80.9 bits (199), Expect = 1e-16
 Identities = 75/273 (27%), Positives = 130/273 (47%), Gaps = 29/273 (10%)

Query: 521 IGVGGFGKVFKGEIEDCT--LAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           IG G FG+VFKG I++ T  + AIK  +  ++E  + + + EI +LS+    ++    G 
Sbjct: 12  IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 70

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIH 637
             +  ++ ++ EY+  G+    L   +  PL   Q         +GL YLH+  +   IH
Sbjct: 71  YLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKK---IH 124

Query: 638 RDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKS 697
           RD+K  N+LL E+   K++DFG++  G   +         G+  ++ PE   +     K+
Sbjct: 125 RDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 182

Query: 698 DVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESL 757
           D++S G+   E+  A+    P  P  +++         K         P L+GNYS    
Sbjct: 183 DIWSLGITAIEL--AKG--EP--PHSELHPMKVLFLIPKNNP------PTLEGNYS---- 226

Query: 758 EKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
           +   E  E CL+ E   RPT  E+L H +++++
Sbjct: 227 KPLKEFVEACLNKEPSFRPTAKELLKH-KFIVR 258

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 80.8 bits (200), Expect = 1e-16
 Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 37/224 (16%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFET--EIEMLSKLRHRHLVSLIGF 577
           IG G +G V+K  +     + AIK+   + E          EI++L +L H +++ L+  
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDV 66

Query: 578 CDEQNEMILVYEYMANG------TLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
              + ++ LV+E+M           +  L  S +    + Q L       +GL + H   
Sbjct: 67  FRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLY-QLL-------QGLAFCH--- 115

Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHTH-VSTAVKGSFGYLDPEYF 688
             GI+HRD+K  N+L++   V K++DFGL+++   P   +TH V T       Y  PE  
Sbjct: 116 SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTR-----WYRAPELL 170

Query: 689 WR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPK----DQINL 727
              +  +   D++S G +  E++  R    P  P     DQ+  
Sbjct: 171 LGDKGYSTPVDIWSVGCIFAELLSRR----PLFPGKSEIDQLFK 210

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 81.2 bits (201), Expect = 1e-16
 Identities = 75/294 (25%), Positives = 126/294 (42%), Gaps = 48/294 (16%)

Query: 511 ATNNFDESLMIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFET--EIEMLSKLR 567
              +++    +G G FG+V+K  +I+   + A+K+    +E+         EI++L KL+
Sbjct: 6   KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLK 65

Query: 568 HRHLVSLI--------GFCDEQNEMILVYEYMA---NGTL---RSHLFGSDLPPLTWKQR 613
           H ++V LI            ++  + +V  YM    +G L      L  S +      Q 
Sbjct: 66  HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIK-CYMLQL 124

Query: 614 LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK---------TG 664
           L+       G++YLH   E  I+HRD+K  NIL+D   + K++DFGL++          G
Sbjct: 125 LE-------GINYLH---ENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKG 174

Query: 665 PSMEHTHVSTAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPK 722
                T   T +  +  Y  PE     R+  T   D++  G V  E+   R ++      
Sbjct: 175 GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTA-VDIWGIGCVFAEMFTRRPILQGKSDI 233

Query: 723 DQINLADWAM-------KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLD 769
           DQ++L  + +        W   RSL      H   NY     E+FG++  + LD
Sbjct: 234 DQLHLI-FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLD 286

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 80.8 bits (199), Expect = 1e-16
 Identities = 47/182 (25%), Positives = 91/182 (50%), Gaps = 14/182 (7%)

Query: 539 LAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           L A+K      ++    +F  EI+++S+L++ +++ L+G C   + + ++ EYM NG L 
Sbjct: 46  LVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLN 105

Query: 598 SHL----------FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL 647
             L            +++P ++    L   +  A G+ YL   A    +HRD+ T N L+
Sbjct: 106 QFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYL---ASLNFVHRDLATRNCLV 162

Query: 648 DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
             ++  K++DFG+S+   S ++  +         ++  E     + T  SDV++FGV L+
Sbjct: 163 GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLW 222

Query: 708 EV 709
           E+
Sbjct: 223 EM 224

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 79.9 bits (197), Expect = 1e-16
 Identities = 70/277 (25%), Positives = 124/277 (44%), Gaps = 30/277 (10%)

Query: 514 NFDESLMIGVGGFGKVF--KGEIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHR 569
            +++  ++G G FG V   + +  D  L  IK+   +  ++      + E ++L  L H 
Sbjct: 1   KYEKIRVVGRGAFGIVHLCRRK-ADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHP 59

Query: 570 HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHT 629
           +++       E   +++V EY   GTL  ++       L     L   +     LH++HT
Sbjct: 60  NIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT 119

Query: 630 GAERGIIHRDVKTTNILLDEN-FVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
              + I+HRD+KT NILLD++  V K+ DFG+SK   S   +   T V G+  Y+ PE  
Sbjct: 120 ---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS--KSKAYTVV-GTPCYISPELC 173

Query: 689 WRQQLTEKSDVYSFGVVLFEVV-CARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH 747
             +   +KSD+++ G VL+E+    RA     LP         A+  +      + I   
Sbjct: 174 EGKPYNQKSDIWALGCVLYELASLKRAFEAANLP---------ALVLKIMSGTFAPISDR 224

Query: 748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
               YSP+      ++    L+ +   RP + +++  
Sbjct: 225 ----YSPD----LRQLILSMLNLDPSKRPQLSQIMAQ 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 80.1 bits (198), Expect = 2e-16
 Identities = 75/282 (26%), Positives = 120/282 (42%), Gaps = 44/282 (15%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           IGVG    V+    + +    AIKR +  + +  + E   E++ +S+  H ++V      
Sbjct: 9   IGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSF 68

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI--GAARGLHYLHTGAERGII 636
              +E+ LV  Y++ G+L   +  S  P     + + A +     +GL YLH     G I
Sbjct: 69  VVGDELWLVMPYLSGGSL-LDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQI 124

Query: 637 HRDVKTTNILLDENFVAKMSDFGLSK---TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ- 692
           HRD+K  NILL E+   K++DFG+S     G         T V G+  ++ PE   +   
Sbjct: 125 HRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFV-GTPCWMAPEVMEQVHG 183

Query: 693 LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY 752
              K+D++SFG+   E                  LA  A  + K   +K ++   L    
Sbjct: 184 YDFKADIWSFGITAIE------------------LATGAAPYSKYPPMKVLM---LTLQN 222

Query: 753 SPESLE------KFG----EIAEKCLDDEGKNRPTMGEVLWH 784
            P SLE      K+     ++   CL  +   RPT  E+L H
Sbjct: 223 DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 79.4 bits (196), Expect = 3e-16
 Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 58/294 (19%)

Query: 512 TNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKR------ANPQSEQGLAEFETEIEMLS 564
             NF     IG G F  V+K   + D  + A+K+       + ++ Q   +   EI++L 
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLK---EIDLLK 57

Query: 565 KLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL---FGSD---LPPLT-WKQRLDAC 617
           +L H +++  +    E NE+ +V E    G L S +   F      +P  T WK  +  C
Sbjct: 58  QLDHPNVIKYLASFIENNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTIWKYFVQLC 116

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL-----SKTGPSMEHTHV 672
                 L ++H    + I+HRD+K  N+ +    V K+ D GL     SKT  +  H+ V
Sbjct: 117 ----SALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT--TAAHSLV 167

Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
            T       Y+ PE         KSD++S G +L+E+   ++        D++NL     
Sbjct: 168 GTPY-----YMSPERIHENGYNFKSDIWSLGCLLYEMAALQS----PFYGDKMNLYSLCK 218

Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGE----IAEKCLDDEGKNRPTMGEVL 782
           K          I+   K +Y P   + + E    +  +C++ + + RP +  VL
Sbjct: 219 K----------IE---KCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVL 259

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 79.3 bits (196), Expect = 3e-16
 Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 37/236 (15%)

Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+++L K    ++V   G      ++ +  EYM  G+L        +      +  +  +
Sbjct: 49  ELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSL------DKILKEVQGRIPERIL 102

Query: 619 GA-----ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHV 672
           G       +GL YLH   +  IIHRDVK +NIL++     K+ DFG+S +   S+  T V
Sbjct: 103 GKIAVAVLKGLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFV 160

Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
            T+      Y+ PE       + KSD++S G+ L E+   R       P    N      
Sbjct: 161 GTSS-----YMAPERIQGNDYSVKSDIWSLGLSLIELATGR------FPYPPEN-DPPDG 208

Query: 733 KWQKQRSLKSIID---PHL-KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
            ++    L+ I++   P L  G +SP+    F +    CL  + + RP+  E+L H
Sbjct: 209 IFEL---LQYIVNEPPPRLPSGKFSPD----FQDFVNLCLIKDPRERPSYKELLEH 257

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 80.1 bits (198), Expect = 4e-16
 Identities = 65/200 (32%), Positives = 95/200 (47%), Gaps = 25/200 (12%)

Query: 521 IGVGGFGKV----FKGEIEDCTLAAIKR----ANPQSEQGLAE---FETEIEMLSKLRHR 569
           +G G FGKV    +K   E   + A+K+    A  + E  + E   FET     +  RH 
Sbjct: 7   LGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFET----ANSERHP 62

Query: 570 HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHT 629
            LV+L      ++ +  V EY A G L  H+  +D+          AC+    GL YLH 
Sbjct: 63  FLVNLFACFQTEDHVCFVMEYAAGGDLMMHIH-TDVFSEPRAVFYAACV--VLGLQYLH- 118

Query: 630 GAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
             E  I++RD+K  N+LLD E FV K++DFGL K G  M     ++   G+  +L PE  
Sbjct: 119 --ENKIVYRDLKLDNLLLDTEGFV-KIADFGLCKEG--MGFGDRTSTFCGTPEFLAPEVL 173

Query: 689 WRQQLTEKSDVYSFGVVLFE 708
                T   D +  GV+++E
Sbjct: 174 TETSYTRAVDWWGLGVLIYE 193

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 78.5 bits (193), Expect = 6e-16
 Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 6/190 (3%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           +G G FG+V+       T  A+K   P S   +  F  E  ++  L+H  LV L     +
Sbjct: 14  LGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK 72

Query: 581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDV 640
           +  + ++ E+MA G+L   L   +       + +D     A G+ ++    +R  IHRD+
Sbjct: 73  E-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDL 128

Query: 641 KTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           +  NIL+  + V K++DFGL++     E+T    A K    +  PE       T KSDV+
Sbjct: 129 RAANILVSASLVCKIADFGLARVIEDNEYTAREGA-KFPIKWTAPEAINFGSFTIKSDVW 187

Query: 701 SFGVVLFEVV 710
           SFG++L E+V
Sbjct: 188 SFGILLMEIV 197

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 78.2 bits (193), Expect = 9e-16
 Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 32/238 (13%)

Query: 556 FETEIEMLSKLRHRHLVSLIGF----CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWK 611
            E EI+ L ++   +++ + GF     D+   + L+ EY   G LR  L       L++K
Sbjct: 65  TENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVL--DKEKDLSFK 122

Query: 612 QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH 671
            +LD  I   +GL+ L+    +   ++++ + + L+ EN+  K+   GL K   S    +
Sbjct: 123 TKLDMAIDCCKGLYNLYKYTNKP--YKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKN 180

Query: 672 VSTAVKGSFGYLDPEYFWR--QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
           V+  V     Y   +       + T K D+YS GVVL+E+   +      +P + +   +
Sbjct: 181 VNFMV-----YFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGK------IPFENLTTKE 229

Query: 730 -WAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
            + +   K  SLK  +D  L+             I E C   +   RP + E+L++L 
Sbjct: 230 IYDLIINKNNSLKLPLDCPLEIKC----------IVEACTSHDSIKRPNIKEILYNLS 277

Length = 283

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 78.0 bits (192), Expect = 9e-16
 Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 12/197 (6%)

Query: 520 MIGVGGFGKVFKGEIEDCT----LAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
           ++G G FG++ +G ++  +      AI   RA    +Q    F  E   L +  H ++V 
Sbjct: 12  ILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRG-FLAEALTLGQFDHSNIVR 70

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           L G     N M++V EYM+NG L S L   +   L   Q +    G A G+ YL   +E 
Sbjct: 71  LEGVITRGNTMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYL---SEM 126

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL 693
           G +H+ +    +L++ + V K+S F   +     E  + + + K    +  PE       
Sbjct: 127 GYVHKGLAAHKVLVNSDLVCKISGFRRLQED-KSEAIYTTMSGKSPVLWAAPEAIQYHHF 185

Query: 694 TEKSDVYSFGVVLFEVV 710
           +  SDV+SFG+V++EV+
Sbjct: 186 SSASDVWSFGIVMWEVM 202

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 77.7 bits (191), Expect = 1e-15
 Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 14/195 (7%)

Query: 521 IGVGGFGKVFKGEIE------DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSL 574
           +G G FG V KG  +      D  +  +K  N +S +   E   E E++ +L + ++V +
Sbjct: 3   LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRD--EMMREAEIMHQLDNPYIVRM 60

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
           IG C+ +  M LV E MA+G   +         +T    ++     + G+ YL     + 
Sbjct: 61  IGVCEAEALM-LVME-MASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLE---GKN 115

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVKGSFGYLDPEYFWRQQL 693
            +HRD+   N+LL     AK+SDFGLSK  G    +    +A K    +  PE    ++ 
Sbjct: 116 FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKF 175

Query: 694 TEKSDVYSFGVVLFE 708
           + +SDV+S+G+ ++E
Sbjct: 176 SSRSDVWSYGITMWE 190

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 78.6 bits (193), Expect = 1e-15
 Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 23/203 (11%)

Query: 520 MIGVGGFGKVFKG----EIEDCTL-AAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVS 573
           ++G G FG V+KG    E E   +  AIK  N  +  +   EF  E  +++ + H HLV 
Sbjct: 14  VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 73

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPLTWKQRLDACIGAARGLHYL 627
           L+G C     + LV + M +G L  ++       GS L  L W      C+  A+G+ YL
Sbjct: 74  LLGVCLSPT-IQLVTQLMPHGCLLDYVHEHKDNIGSQLL-LNW------CVQIAKGMMYL 125

Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY 687
               ER ++HRD+   N+L+      K++DFGL++     E  + +   K    ++  E 
Sbjct: 126 E---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 182

Query: 688 FWRQQLTEKSDVYSFGVVLFEVV 710
              ++ T +SDV+S+GV ++E++
Sbjct: 183 IHYRKFTHQSDVWSYGVTIWELM 205

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 81.0 bits (200), Expect = 1e-15
 Identities = 69/303 (22%), Positives = 128/303 (42%), Gaps = 35/303 (11%)

Query: 497 TRAGKRFTLAEIRVATNNFDESLMI----GVGGFGKVFKGEIEDCTLAAIKRANPQSEQG 552
           ++  K  T+ +I  +    +E+++     G    GK  K  ++   +  I   N      
Sbjct: 677 SKVSKSITINDILSSLK--EENVISRGKKGASYKGKSIKNGMQ-FVVKEINDVNSIPSSE 733

Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           +A+         KL+H ++V LIG C  +    L++EY+    L   L       L+W++
Sbjct: 734 IADM-------GKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-----LSWER 781

Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP-SMEHTH 671
           R    IG A+ L +LH      ++  ++    I++D      +    LS  G    +   
Sbjct: 782 RRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR---LSLPGLLCTDTKC 838

Query: 672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN--LAD 729
             ++      Y+ PE    + +TEKSD+Y FG++L E++  +   +P   +  ++  + +
Sbjct: 839 FISS-----AYVAPETRETKDITEKSDIYGFGLILIELLTGK---SPADAEFGVHGSIVE 890

Query: 730 WAMKWQKQRSLKSIIDPHLKGNYSPESLE--KFGEIAEKCLDDEGKNRPTMGEVLWHLEY 787
           WA        L   IDP ++G+ S    E  +   +A  C   +   RP   +VL  LE 
Sbjct: 891 WARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLES 950

Query: 788 VLQ 790
             +
Sbjct: 951 ASR 953

Length = 968

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 78.1 bits (192), Expect = 1e-15
 Identities = 60/231 (25%), Positives = 108/231 (46%), Gaps = 40/231 (17%)

Query: 515 FDESLMIGVGGFGKVFKGEIED-----------------CTLAAIKRANPQ-SEQGLAEF 556
           F E L  G G FG+V   E+ +                   L A+K   P  ++    +F
Sbjct: 9   FKEKL--GEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDF 66

Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLF----------GSD-- 604
             E+++LS+L+  +++ L+G C +++ + ++ EYM NG L   L           G+D  
Sbjct: 67  LKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAV 126

Query: 605 -----LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG 659
                LP +++   L   +  A G+ YL   +    +HRD+ T N L+ EN   K++DFG
Sbjct: 127 PPAHCLPAISYSSLLHVALQIASGMKYL---SSLNFVHRDLATRNCLVGENLTIKIADFG 183

Query: 660 LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           +S+   + ++  +         ++  E     + T  SDV++FGV L+E++
Sbjct: 184 MSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL 234

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 77.3 bits (191), Expect = 2e-15
 Identities = 79/297 (26%), Positives = 115/297 (38%), Gaps = 71/297 (23%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGF- 577
           IG G +GKV+K    +   L AIK  +   ++   E + E  +L K   H ++ +  G  
Sbjct: 14  IGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE-EEEIKEEYNILRKYSNHPNIATFYGAF 72

Query: 578 -----CDEQNEMILVYEYMANGTLRSHLFGSDLPP--LTWKQRLDA------CIGAARGL 624
                    +++ LV E    G++      +DL        +RL             RGL
Sbjct: 73  IKKNPPGNDDQLWLVMELCGGGSV------TDLVKGLRKKGKRLKEEWIAYILRETLRGL 126

Query: 625 HYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS---KTGPSMEHTHVSTA------ 675
            YLH   E  +IHRD+K  NILL +N   K+ DFG+S    +     +T + T       
Sbjct: 127 AYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPE 183

Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA---M 732
           V       D  Y        +SDV+S G+                    I LAD      
Sbjct: 184 VIACDEQPDASY------DARSDVWSLGIT------------------AIELADGKPPLC 219

Query: 733 KWQKQRSLKSII---DPHLK--GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                R+L  I     P LK   N+S    +KF +   +CL    + RP M E+L H
Sbjct: 220 DMHPMRALFKIPRNPPPTLKSPENWS----KKFNDFISECLIKNYEQRPFMEELLEH 272

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 77.4 bits (191), Expect = 3e-15
 Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 20/204 (9%)

Query: 520 MIGVGGFGKVFKGEIEDCT-LAAIKRANPQSEQGLAEFETEIEMLSKL------RHRHLV 572
           ++G G FGKV   E++    L A+K    + +  L + + E  M  K       +H  L 
Sbjct: 2   VLGKGSFGKVLLAELKGTDELYAVKVL--KKDVILQDDDVECTMTEKRVLALAGKHPFLT 59

Query: 573 SLIGFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
            L      Q +  +  V EY+  G L  H+  S        +   A I    GL +LH  
Sbjct: 60  QL--HSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEI--VLGLQFLH-- 113

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
            ERGII+RD+K  N+LLD     K++DFG+ K G  +     ++   G+  Y+ PE    
Sbjct: 114 -ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEG--ILGGVTTSTFCGTPDYIAPEILSY 170

Query: 691 QQLTEKSDVYSFGVVLFEVVCARA 714
           Q      D ++ GV+L+E++  ++
Sbjct: 171 QPYGPAVDWWALGVLLYEMLAGQS 194

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 76.5 bits (188), Expect = 3e-15
 Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 15/199 (7%)

Query: 520 MIGVGGFGKVFKG----EIEDCTL-AAIKR-ANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
           ++G G FG V KG    E +   +  AIK   +    Q   E    +  +  L H ++V 
Sbjct: 14  LLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVR 73

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
           L+G C     + LV +    G+L  H+      L P   ++ L+ C+  A+G++YL    
Sbjct: 74  LLGIC-PGASLQLVTQLSPLGSLLDHVRQHRDSLDP---QRLLNWCVQIAKGMYYLE--- 126

Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ 691
           E  ++HR++   NILL  + + +++DFG++      +  +  +  K    ++  E     
Sbjct: 127 EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFG 186

Query: 692 QLTEKSDVYSFGVVLFEVV 710
           + T +SDV+S+GV ++E++
Sbjct: 187 RYTHQSDVWSYGVTVWEMM 205

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 76.9 bits (190), Expect = 3e-15
 Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 18/196 (9%)

Query: 521 IGVGGFGKVFK-GEIEDCTLAAIKR-ANPQSEQGLAE-FETEIEMLSKLRHRHLVSLIGF 577
           IG G  G VFK  + E     A+K+ A  + E G+      EI+ L   +H ++V L+  
Sbjct: 8   IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDV 67

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLP-PLTWKQRLDACIGAARGLHYLHTGAERGII 636
               +  +LV EYM    L   L   + P P    +     +   +G+ Y+H     GI+
Sbjct: 68  FPHGSGFVLVMEYMP-SDLSEVLRDEERPLPEAQVKSYMRML--LKGVAYMH---ANGIM 121

Query: 637 HRDVKTTNILLDENFVAKMSDFGLS---KTGPSMEHTHVSTAVKGSFGYLDPEYFW-RQQ 692
           HRD+K  N+L+  + V K++DFGL+          ++H    V  +  Y  PE  +  ++
Sbjct: 122 HRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSH---QV-ATRWYRAPELLYGARK 177

Query: 693 LTEKSDVYSFGVVLFE 708
                D+++ G +  E
Sbjct: 178 YDPGVDLWAVGCIFAE 193

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 76.6 bits (188), Expect = 3e-15
 Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 28/209 (13%)

Query: 521 IGVGGFGKVFKG------EIEDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVS 573
           +G G FG V++G      + E  T  AIK  N   S +   EF  E  ++ +    H+V 
Sbjct: 14  LGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 73

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFG--------SDLPPLTWKQRLDACIGAARGLH 625
           L+G   +    +++ E M  G L+S+L              P + K+ +      A G+ 
Sbjct: 74  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMA 133

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG---- 681
           YL+       +HRD+   N ++ E+F  K+ DFG+++     ++       KG  G    
Sbjct: 134 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-----KGGKGLLPV 185

Query: 682 -YLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
            ++ PE       T  SDV+SFGVVL+E+
Sbjct: 186 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 214

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 77.2 bits (190), Expect = 4e-15
 Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 36/228 (15%)

Query: 512 TNNFDESLMIGVGGFGKV--FKGEIEDCTLAAIKRANPQSEQGLAEFE-TEIEMLSKLRH 568
           TN + +   +G+G FG V   + ++    +A  K   P S   LA+    E+++L  LRH
Sbjct: 9   TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRH 68

Query: 569 RHLVSLIG-FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA------CIGAA 621
            +++SL   F     ++  V E          L G+DL  L   + L+            
Sbjct: 69  ENIISLSDIFISPLEDIYFVTE----------LLGTDLHRLLTSRPLEKQFIQYFLYQIL 118

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG 681
           RGL Y+H+    G++HRD+K +NIL++EN   K+ DFGL++        +VST       
Sbjct: 119 RGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRY----- 170

Query: 682 YLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP-KDQIN 726
           Y  PE    W Q+   + D++S G +  E++  +    P  P KD +N
Sbjct: 171 YRAPEIMLTW-QKYDVEVDIWSAGCIFAEMLEGK----PLFPGKDHVN 213

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 76.1 bits (187), Expect = 5e-15
 Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 40/289 (13%)

Query: 520 MIGVGGFGKVFKGEI--EDCTL--AAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
           M+G G FG V + ++  ED +    A+K  +A+  S   + EF  E   + +  H +++ 
Sbjct: 6   MLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIK 65

Query: 574 LIGFCDEQNEM------ILVYEYMANGTLRSHLFGSDL--PPLTWKQR--LDACIGAARG 623
           LIG              +++  +M +G L + L  S +   P T   +  +   I  A G
Sbjct: 66  LIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASG 125

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           + YL   + +  IHRD+   N +L+EN    ++DFGLSK   S ++     A K    +L
Sbjct: 126 MEYL---SSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWL 182

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI 743
             E       T  SDV++FGV ++E++         +   +                  I
Sbjct: 183 ALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE------------------I 224

Query: 744 IDPHLKGN---YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL 789
            +  +KGN     P+ LE   E+  +C   E K RP+   +   LE + 
Sbjct: 225 YNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELIW 273

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 75.8 bits (186), Expect = 6e-15
 Identities = 73/285 (25%), Positives = 123/285 (43%), Gaps = 49/285 (17%)

Query: 521 IGVGGFGKVFKGEIEDC------TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVS 573
           +G G FG V++G   D       T  A+K  N   S +   EF  E  ++      H+V 
Sbjct: 14  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 73

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHL--FGSDL------PPLTWKQRLDACIGAARGLH 625
           L+G   +    ++V E MA+G L+S+L     +       PP T ++ +      A G+ 
Sbjct: 74  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 133

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG---- 681
           YL+    +  +HRD+   N ++  +F  K+ DFG+++     ++       KG  G    
Sbjct: 134 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR-----KGGKGLLPV 185

Query: 682 -YLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL 740
            ++ PE       T  SD++SFGVVL+E+          L  +Q+              L
Sbjct: 186 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV--------------L 231

Query: 741 KSIIDPHLKGNY--SPESL-EKFGEIAEKCLDDEGKNRPTMGEVL 782
           K ++D    G Y   P++  E+  ++   C     K RPT  E++
Sbjct: 232 KFVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 272

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 75.8 bits (187), Expect = 7e-15
 Identities = 81/315 (25%), Positives = 124/315 (39%), Gaps = 73/315 (23%)

Query: 513 NNFDESLMIGVGGFGKVFK------GEIEDCTLAAIK--RANPQSEQGLAEFETEIEMLS 564
           N ++   ++G G +G V K      GEI      AIK  + +   E        E+++L 
Sbjct: 1   NKYEVLGVVGEGAYGVVLKCRNKATGEI-----VAIKKFKESEDDEDVKKTALREVKVLR 55

Query: 565 KLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL--FGSDLPP-----LTWKQRLDAC 617
           +LRH ++V+L      +  + LV+EY+   TL   L      LPP       W Q L   
Sbjct: 56  QLRHENIVNLKEAFRRKGRLYLVFEYVER-TLLELLEASPGGLPPDAVRSYIW-QLL--- 110

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK--TGPSMEH--THVS 673
               + + Y H      IIHRD+K  NIL+ E+ V K+ DFG ++            +V+
Sbjct: 111 ----QAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVA 163

Query: 674 TAVKGSFGYLDPEYFWRQQLTEKS-DVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
           T       Y  PE         K  DV++ G ++ E++    +       DQ+       
Sbjct: 164 TR-----WYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQL------- 211

Query: 733 KWQKQRSLKSII---------DPHLKGN-----YSPESLE-----KFGEIA----EKCLD 769
            +  Q+ L  +          +P   G        PESLE     K    A    + CL 
Sbjct: 212 -YLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLR 270

Query: 770 DEGKNRPTMGEVLWH 784
            + K R T  E+L H
Sbjct: 271 MDPKERLTCDELLQH 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 75.7 bits (187), Expect = 8e-15
 Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 28/202 (13%)

Query: 521 IGVGGFGKVF----KGEIEDCTLAAIKRANPQS--EQGLAE-FETEIEMLSKLRHRHLVS 573
           +G G FG+V     KG  +     A+K  +     +    E    E  +L  +RH  LV+
Sbjct: 9   LGTGSFGRVMLVRHKGSGKYY---ALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVN 65

Query: 574 LIG-FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR---GLHYLHT 629
           L G F D+ N + LV EY+  G L SHL  S   P        A   AA+    L YLH+
Sbjct: 66  LYGSFQDDSN-LYLVMEYVPGGELFSHLRKSGRFPEPV-----ARFYAAQVVLALEYLHS 119

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW 689
                I++RD+K  N+LLD +   K++DFG +K      +T   T       YL PE   
Sbjct: 120 ---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTP-----EYLAPEIIL 171

Query: 690 RQQLTEKSDVYSFGVVLFEVVC 711
            +   +  D ++ G++++E++ 
Sbjct: 172 SKGYGKAVDWWALGILIYEMLA 193

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 75.1 bits (184), Expect = 9e-15
 Identities = 72/293 (24%), Positives = 133/293 (45%), Gaps = 56/293 (19%)

Query: 514 NFDESLMIGVGGFGKVFKG-EIEDCTLAAIKRA-----NPQSEQGLAEFETEIEMLSKLR 567
           N+    ++G G FG+V+   +++     A K+      +P++ + ++  E EI++L  L+
Sbjct: 3   NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ 62

Query: 568 HRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHL--FGSDLPPLTWK---QRLDACIGA 620
           H  +V   G   ++ E  + +  EYM  G+++  L  +G+    +T K   Q L+     
Sbjct: 63  HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILE----- 117

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS--MEHTHVSTAVKG 678
             G+ YLH+     I+HRD+K  NIL D     K+ DFG SK   +  M  T + + V G
Sbjct: 118 --GMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRS-VTG 171

Query: 679 SFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR 738
           +  ++ PE    +    K+DV+S G  + E++  +                    W +  
Sbjct: 172 TPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKP------------------PWAEYE 213

Query: 739 SLKSII-------DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
           ++ +I        +P L  + S  + +  G     C+  E ++RP+  E+L H
Sbjct: 214 AMAAIFKIATQPTNPQLPSHISEHARDFLG-----CIFVEARHRPSAEELLRH 261

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 75.1 bits (184), Expect = 1e-14
 Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 37/286 (12%)

Query: 521 IGVGGFGKVFKGEI--EDCTL-AAIKRAN----PQSEQGLAEFETEIEMLSKLRHRHLVS 573
           +G G FG V +G++  +D  L  A+K        +SE  + +F +E   + +  H +++ 
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSE--MEDFLSEAVCMKEFDHPNVMR 64

Query: 574 LIGFCDEQNEM------ILVYEYMANGTLRSHLFGS---DLPPLTWKQRLDACIG-AARG 623
           LIG C +  E       +++  +M +G L S L  S   D P     Q L   +   A G
Sbjct: 65  LIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG 124

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           + YL +   +  IHRD+   N +L+EN    ++DFGLSK   + ++       K    ++
Sbjct: 125 MEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWI 181

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI 743
             E    +  T KSDV+SFGV ++E+        P +   +I   D+    ++   LK  
Sbjct: 182 AIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEI--YDYL---RQGNRLKQ- 235

Query: 744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL 789
                     P+ L+    +   C     K+RP+   +   LE  L
Sbjct: 236 ---------PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKAL 272

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 76.2 bits (188), Expect = 1e-14
 Identities = 58/222 (26%), Positives = 92/222 (41%), Gaps = 42/222 (18%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANP----QSEQGLAEFETEIEMLSKLRHRHLVSLI 575
           IG G FG+V+   + +   + A+K        +  Q +A    E ++L+      +V L 
Sbjct: 9   IGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQ-IAHVRAERDILADADSPWIVKLY 67

Query: 576 -GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
             F DE++ + LV EYM  G L + L   D+ P    +   A +  A  L  +H   + G
Sbjct: 68  YSFQDEEH-LYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLA--LDSVH---KLG 121

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPS---------------------------- 666
            IHRD+K  NIL+D +   K++DFGL K                                
Sbjct: 122 FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHK 181

Query: 667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
                 ++ V G+  Y+ PE         + D +S GV+L+E
Sbjct: 182 QRRVRANSTV-GTPDYIAPEVLRGTPYGLECDWWSLGVILYE 222

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 77.2 bits (190), Expect = 1e-14
 Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 48/222 (21%)

Query: 579 DEQNE-----MILVYEYMANGTLRSHL---------FGSDLPPLTWKQRLDACIGAARGL 624
           D +N      + LV +Y   G LR  +         F      L + Q L A       +
Sbjct: 104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLA-------V 156

Query: 625 HYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG--- 681
           H++H+   + +IHRD+K+ NILL  N + K+ DFG SK    M    VS  V  +F    
Sbjct: 157 HHVHS---KHMIHRDIKSANILLCSNGLVKLGDFGFSK----MYAATVSDDVGRTFCGTP 209

Query: 682 -YLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL 740
            Y+ PE + R+  ++K+D++S GV+L+E++  +       P D  N+ +  M     ++L
Sbjct: 210 YYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKR------PFDGENMEE-VM----HKTL 258

Query: 741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
               DP L  + SPE      EI    L  + K RP+  ++L
Sbjct: 259 AGRYDP-LPPSISPE----MQEIVTALLSSDPKRRPSSSKLL 295

Length = 496

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 74.6 bits (183), Expect = 1e-14
 Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 31/269 (11%)

Query: 521 IGVGGFGKV-FKGEIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLI-G 576
           +G G +G+V       D     IK+ N +  S +     E E ++LS+L+H ++V+    
Sbjct: 8   VGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRES 67

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGII 636
           +  E   + +V  +   G L   L       L   Q ++  +  A  L YLH   E+ I+
Sbjct: 68  WEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH---EKHIL 124

Query: 637 HRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEK 696
           HRD+KT N+ L    + K+ D G+++   +     +++ + G+  Y+ PE F  +    K
Sbjct: 125 HRDLKTQNVFLTRTNIIKVGDLGIARVLEN--QCDMASTLIGTPYYMSPELFSNKPYNYK 182

Query: 697 SDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID---PHLKGNYS 753
           SDV++ G  ++E+   +   N    KD  +L            +  II+   P +  +YS
Sbjct: 183 SDVWALGCCVYEMATLKHAFN---AKDMNSL------------VYRIIEGKLPPMPKDYS 227

Query: 754 PESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
           PE     GE+    L    + RP++  +L
Sbjct: 228 PE----LGELIATMLSKRPEKRPSVKSIL 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 74.9 bits (184), Expect = 1e-14
 Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 21/204 (10%)

Query: 521 IGVGGFGKVFKGEIEDC-TLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           +G GGFG+V   ++     L A K+ N +     +G      E  +L+K+  R +VSL  
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAY 60

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLP-PLTWKQRLDACIGAAR---GLHYLHTGAE 632
               + ++ LV   M  G LR H++  D   P   + R  AC   A+   GL +LH   +
Sbjct: 61  AFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPR--ACFYTAQIISGLEHLH---Q 115

Query: 633 RGIIHRDVKTTNILLDENFVAKMSDFGLS---KTGPSMEHTHVSTAVKGSFGYLDPEYFW 689
           R II+RD+K  N+LLD +   ++SD GL+   K G S    +  T      G++ PE   
Sbjct: 116 RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTP-----GFMAPELLQ 170

Query: 690 RQQLTEKSDVYSFGVVLFEVVCAR 713
            ++     D ++ GV L+E++ AR
Sbjct: 171 GEEYDFSVDYFALGVTLYEMIAAR 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 74.3 bits (182), Expect = 2e-14
 Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 32/269 (11%)

Query: 521 IGVGGFGKVFKGEIEDCT--LAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           IG G FG+V+KG I++ T  + AIK  +  ++E  + + + EI +LS+    ++    G 
Sbjct: 12  IGKGSFGEVYKG-IDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGS 70

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIH 637
             +  ++ ++ EY+  G+    L    L        L   +   +GL YLH+  ER I H
Sbjct: 71  YLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREIL---KGLDYLHS--ERKI-H 124

Query: 638 RDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV--STAVKGSFGYLDPEYFWRQQLTE 695
           RD+K  N+LL E    K++DFG++     +  T +  +T V   F ++ PE   +     
Sbjct: 125 RDIKAANVLLSEQGDVKLADFGVAG---QLTDTQIKRNTFVGTPF-WMAPEVIKQSAYDF 180

Query: 696 KSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPE 755
           K+D++S G+   E+       +   P   + L            +     P L+G YS  
Sbjct: 181 KADIWSLGITAIELAKGEPPNSDLHPMRVLFL------------IPKNSPPTLEGQYS-- 226

Query: 756 SLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
             + F E  E CL+ + + RPT  E+L H
Sbjct: 227 --KPFKEFVEACLNKDPRFRPTAKELLKH 253

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 74.3 bits (182), Expect = 2e-14
 Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 40/273 (14%)

Query: 521 IGVGGFGKVFKGEIEDCT--LAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           IG G FG+VFKG I++ T  + AIK  +  ++E  + + + EI +LS+    ++    G 
Sbjct: 12  IGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 70

Query: 578 CDEQNEMILVYEYMANGT----LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
             +  ++ ++ EY+  G+    LR+  F         K+ L       +GL YLH+  + 
Sbjct: 71  YLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL-------KGLDYLHSEKK- 122

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV--STAVKGSFGYLDPEYFWRQ 691
             IHRD+K  N+LL E    K++DFG++     +  T +  +T V   F ++ PE   + 
Sbjct: 123 --IHRDIKAANVLLSEQGDVKLADFGVAG---QLTDTQIKRNTFVGTPF-WMAPEVIQQS 176

Query: 692 QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN 751
               K+D++S G+   E+       +   P   + L            +     P L G 
Sbjct: 177 AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL------------IPKNNPPTLTGE 224

Query: 752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
           +S    + F E  + CL+ +   RPT  E+L H
Sbjct: 225 FS----KPFKEFIDACLNKDPSFRPTAKELLKH 253

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 73.9 bits (181), Expect = 2e-14
 Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 10/156 (6%)

Query: 509 RVATNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR 567
           R    +F+    IG G +G V+K   +    LAAIK    +  +  A  + EI M+   +
Sbjct: 5   RNPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCK 64

Query: 568 HRHLVSLIGFCDEQNEMILVYEYMANGTLRS--HLFGSDLPPLTWKQRLDACIGAARGLH 625
           H ++V+  G    ++++ +  E+   G+L+   H+ G    PL+  Q         +GL+
Sbjct: 65  HSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTG----PLSESQIAYVSRETLQGLY 120

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS 661
           YLH+   +G +HRD+K  NILL +N   K++DFG+S
Sbjct: 121 YLHS---KGKMHRDIKGANILLTDNGHVKLADFGVS 153

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 74.3 bits (182), Expect = 2e-14
 Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 26/224 (11%)

Query: 507 EIRVATNNFDESLMIGVGGFGKVFKGEI------EDCTLAAIKRANPQSEQGL-AEFETE 559
           EI ++T  F E L  G   FGKV+KG +      E     AIK    ++E  L  EF+ E
Sbjct: 1   EINLSTVRFMEEL--GEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHE 58

Query: 560 IEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL--------FGSDLPPLTWK 611
             M S+L+H ++V L+G   ++  + +++ Y ++  L   L         GS     T K
Sbjct: 59  AMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVK 118

Query: 612 QRLDA------CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP 665
             L+           A G+ +L   +   ++H+D+ T N+L+ +    K+SD GL +   
Sbjct: 119 STLEPADFVHIVTQIAAGMEFL---SSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVY 175

Query: 666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           + ++  +         ++ PE     + +  SD++S+GVVL+EV
Sbjct: 176 AADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEV 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 73.3 bits (180), Expect = 3e-14
 Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 10/193 (5%)

Query: 521 IGVGGFGK-VFKGEIEDCTLAAIKRAN--PQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           IG G FGK +     ED     IK  N    S +   E   E+ +LS ++H ++V     
Sbjct: 8   IGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQES 67

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIH 637
            +E   + +V +Y   G L   +           Q LD  +     L ++H   +R I+H
Sbjct: 68  FEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH---DRKILH 124

Query: 638 RDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEK 696
           RD+K+ NI L ++   K+ DFG+++    ++E   ++    G+  YL PE    +    K
Sbjct: 125 RDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE---LARTCIGTPYYLSPEICENRPYNNK 181

Query: 697 SDVYSFGVVLFEV 709
           SD+++ G VL+E+
Sbjct: 182 SDIWALGCVLYEM 194

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 74.7 bits (184), Expect = 3e-14
 Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 22/207 (10%)

Query: 513 NNFDESLMIGVGGFGKVFKGEIEDC-TLAAIKRANPQSEQGLAEFE---TEIEMLSKLRH 568
            +F     +G GG+G+VF  + +D   + A+KR        L E     TE ++L+  + 
Sbjct: 1   KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS 60

Query: 569 RHLVSLI-GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQR---LDACIGAARGL 624
             LV L+  F D++  + L  EY+  G  R+ L  ++L  L+       +     A   L
Sbjct: 61  EWLVKLLYAFQDDEY-LYLAMEYVPGGDFRTLL--NNLGVLSEDHARFYMAEMFEAVDAL 117

Query: 625 HYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLD 684
           H L      G IHRD+K  N L+D +   K++DFGLSK   +  ++ V     GS  Y+ 
Sbjct: 118 HEL------GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVV-----GSPDYMA 166

Query: 685 PEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           PE    +      D +S G +L+E +C
Sbjct: 167 PEVLRGKGYDFTVDYWSLGCMLYEFLC 193

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 73.8 bits (182), Expect = 4e-14
 Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 33/169 (19%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAE---FET--EIEMLSKLRHRHLVSL 574
           +G G +  V+K    E   + AIK+      +   +   F    EI++L +L+H +++ L
Sbjct: 8   LGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGL 67

Query: 575 IG-FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQR----LDACIGA-----ARGL 624
           +  F  + N + LV+E+M           +DL  +  K +      A I +      RGL
Sbjct: 68  LDVFGHKSN-INLVFEFME----------TDLEKV-IKDKSIVLTPADIKSYMLMTLRGL 115

Query: 625 HYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHTH 671
            YLH      I+HRD+K  N+L+  + V K++DFGL+++   P+ + TH
Sbjct: 116 EYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTH 161

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 76.4 bits (188), Expect = 4e-14
 Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 26/185 (14%)

Query: 547 PQSEQGLAEFETEIEMLSKLRHRHLVSLI--GFCDEQNEMILVYEYMANGTLRSHLFGSD 604
           P+ E   A F  E  + ++L H ++V+L+  G       +  V+EY+   TLR  L    
Sbjct: 16  PEEEHQRARFRRETALCARLYHPNIVALLDSGEA-PPGLLFAVFEYVPGRTLREVLAADG 74

Query: 605 -LPPLT----WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMS 656
            LP         Q LDA   A            +GI+HRD+K  NI++        AK+ 
Sbjct: 75  ALPAGETGRLMLQVLDALACAHN----------QGIVHRDLKPQNIMVSQTGVRPHAKVL 124

Query: 657 DFGLSKTGPSMEHTHVSTA-----VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           DFG+    P +    V+T      V G+  Y  PE    + +T  SD+Y++G++  E + 
Sbjct: 125 DFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLT 184

Query: 712 ARAVI 716
            + V+
Sbjct: 185 GQRVV 189

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 72.8 bits (178), Expect = 6e-14
 Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 38/282 (13%)

Query: 514 NFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRA------NPQSEQGLAEFETEIEMLSKL 566
           NF     IG G F +V++   + D    A+K+       + ++ Q   +   EI++L +L
Sbjct: 3   NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVK---EIDLLKQL 59

Query: 567 RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL--FGSD---LPPLT-WKQRLDACIGA 620
            H +++  +    E NE+ +V E    G L   +  F      +P  T WK  +  C   
Sbjct: 60  NHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLC--- 116

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSF 680
              + ++H+   R ++HRD+K  N+ +    V K+ D GL +   S   T  + ++ G+ 
Sbjct: 117 -SAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS--KTTAAHSLVGTP 170

Query: 681 GYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL 740
            Y+ PE         KSD++S G +L+E+    A +      D++NL     K ++    
Sbjct: 171 YYMSPERIHENGYNFKSDIWSLGCLLYEM----AALQSPFYGDKMNLFSLCQKIEQCD-- 224

Query: 741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
                P    +YS    EK  E+   C+  +   RP +G V 
Sbjct: 225 ---YPPLPTEHYS----EKLRELVSMCIYPDPDQRPDIGYVH 259

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 72.3 bits (177), Expect = 9e-14
 Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 14/202 (6%)

Query: 515 FDESLMIGVGGFGKV------FKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRH 568
           F +  ++G GGFG+V        G++  C     KR   +  + +A  E +I  L K+  
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQI--LEKVNS 59

Query: 569 RHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLH 628
           + +V+L    + ++ + LV   M  G L+ H++    P    ++ L        GL  LH
Sbjct: 60  QFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLH 119

Query: 629 TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
                  ++RD+K  NILLD+    ++SD GL+   P  E         G+ GY+ PE  
Sbjct: 120 ---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRV---GTVGYMAPEVL 173

Query: 689 WRQQLTEKSDVYSFGVVLFEVV 710
             Q+ T   D +  G +++E++
Sbjct: 174 NNQRYTLSPDYWGLGCLIYEMI 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 72.0 bits (176), Expect = 9e-14
 Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 32/273 (11%)

Query: 514 NFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRA---NPQSEQGLAEFETEIEMLSKLRHR 569
           NF     IG G F +V++   + D    A+K+    +    +  A+   EI++L +L H 
Sbjct: 3   NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 62

Query: 570 HLVSLIGFCDEQNEMILVYEYMANGTLRSHL--FGSD---LPPLT-WKQRLDACIGAARG 623
           +++       E NE+ +V E    G L   +  F      +P  T WK  +  C      
Sbjct: 63  NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLC----SA 118

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           L ++H+   R ++HRD+K  N+ +    V K+ D GL +   S   T  + ++ G+  Y+
Sbjct: 119 LEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYM 173

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI 743
            PE         KSD++S G +L+E+    A +      D++NL     K      ++  
Sbjct: 174 SPERIHENGYNFKSDIWSLGCLLYEM----AALQSPFYGDKMNLYSLCKK------IEQC 223

Query: 744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRP 776
             P L  ++  E L +   +   C++ + + RP
Sbjct: 224 DYPPLPSDHYSEELRQ---LVNMCINPDPEKRP 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 72.2 bits (177), Expect = 9e-14
 Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 12/213 (5%)

Query: 507 EIRVATNNFDESLMIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSK 565
           E     +   E +++G G +G V+   ++      AIK    +  + +     EI + S 
Sbjct: 2   EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSY 61

Query: 566 LRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA--RG 623
           L+HR++V  +G   E     +  E +  G+L S L  S   PL   ++           G
Sbjct: 62  LKHRNIVQYLGSDSENGFFKIFMEQVPGGSL-SALLRSKWGPLKDNEQTIIFYTKQILEG 120

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDE-NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           L YLH   +  I+HRD+K  N+L++  + V K+SDFG SK    +     +    G+  Y
Sbjct: 121 LKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI--NPCTETFTGTLQY 175

Query: 683 LDPEYFWRQQ--LTEKSDVYSFGVVLFEVVCAR 713
           + PE   +        +D++S G  + E+   +
Sbjct: 176 MAPEVIDKGPRGYGAPADIWSLGCTIVEMATGK 208

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 72.7 bits (178), Expect = 1e-13
 Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 26/207 (12%)

Query: 520 MIGVGGFGKVFKGEIEDCT-LAAIKRANPQSEQGLAEFETEIEMLSK------LRHRHLV 572
           M+G G FGKVF  E++      AIK    + +  L + + E  M+ K        H  L 
Sbjct: 2   MLGKGSFGKVFLAELKGTNQFFAIKAL--KKDVVLMDDDVECTMVEKRVLSLAWEHPFLT 59

Query: 573 SLIGFCDEQNE--MILVYEYMANGTLRSHLFGS---DLPPLTWKQRLDACIGAARGLHYL 627
            L  +C  Q +  +  V EY+  G L  H+      DLP  T+      C     GL +L
Sbjct: 60  HL--YCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIIC-----GLQFL 112

Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY 687
           H+   +GI++RD+K  NILLD +   K++DFG+ K   +M     +    G+  Y+ PE 
Sbjct: 113 HS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKE--NMLGDAKTCTFCGTPDYIAPEI 167

Query: 688 FWRQQLTEKSDVYSFGVVLFEVVCARA 714
              Q+     D +SFGV+L+E++  ++
Sbjct: 168 LLGQKYNTSVDWWSFGVLLYEMLIGQS 194

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 72.5 bits (178), Expect = 1e-13
 Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 21/210 (10%)

Query: 513 NNFDESLMIGVGGFGKVFKGEI-----EDCTL-AAIKRANPQSEQGLAE-FETEIEMLSK 565
           NN      +G G FGKV +         D  +  A+K   P +     E   +E++++S 
Sbjct: 35  NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSH 94

Query: 566 L-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGL 624
           L  H ++V+L+G C     ++++ EY   G L + L       LT +  L      A+G+
Sbjct: 95  LGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGM 154

Query: 625 HYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST-AVKGS---- 679
            +L   A +  IHRD+   N+LL    + K+ DFGL++     +  + S   VKG+    
Sbjct: 155 AFL---ASKNCIHRDLAARNVLLTHGKIVKICDFGLAR-----DIMNDSNYVVKGNARLP 206

Query: 680 FGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
             ++ PE  +    T +SDV+S+G++L+E+
Sbjct: 207 VKWMAPESIFNCVYTFESDVWSYGILLWEI 236

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 72.2 bits (177), Expect = 1e-13
 Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 34/223 (15%)

Query: 515 FDESLMIGVGGFGKVFKGEIE--------DCT---------LAAIK--RANPQSEQGLAE 555
           F E L  G G FG+V   E E        D +         L A+K  R +  ++    +
Sbjct: 9   FKEKL--GEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED-ANKNARND 65

Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL---------FGSDLP 606
           F  EI+++S+L+  +++ L+  C   + + ++ EYM NG L   L           +D+ 
Sbjct: 66  FLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVV 125

Query: 607 PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS 666
            +++   +      A G+ YL   +    +HRD+ T N L+ +N+  K++DFG+S+   S
Sbjct: 126 TISYSTLIFMATQIASGMKYL---SSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYS 182

Query: 667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
            ++  +         ++  E     + T  SDV++FGV L+E+
Sbjct: 183 GDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEI 225

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 71.2 bits (174), Expect = 2e-13
 Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 36/214 (16%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIKRA-----NPQSEQGLAEFETEIEMLSKLRHRHLVS 573
           ++G G FG+V+   + +     A+K+      +P++ + +   E EI++L  L H  +V 
Sbjct: 9   LLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQ 68

Query: 574 LIGFCDEQNEMIL--VYEYMANGTLRSHL--FGSDLPPLTWK---QRLDACIGAARGLHY 626
             G   +  E  L    E+M  G+++  L  +G+    +T K   Q L+       G+ Y
Sbjct: 69  YYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILE-------GVSY 121

Query: 627 LHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK-------TGPSMEHTHVSTAVKGS 679
           LH+     I+HRD+K  NIL D     K+ DFG SK       +G  M+      +V G+
Sbjct: 122 LHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMK------SVTGT 172

Query: 680 FGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
             ++ PE    +    K+D++S G  + E++  +
Sbjct: 173 PYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEK 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 71.1 bits (174), Expect = 2e-13
 Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 20/202 (9%)

Query: 521 IGVGGFGKVF----KGEIEDCTLAAIKRA-----NPQSEQGLAEFETEIEMLSKLRHRHL 571
           +G G FG V+    K  + +  L  +K       NP       +   E ++LSKL H  +
Sbjct: 8   LGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNET---VQANQEAQLLSKLDHPAI 64

Query: 572 VSLIGFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWKQRLDACIGAARGLHYLHT 629
           V       E++   ++ EY     L   L         L+  Q  +  I    G+HY+H 
Sbjct: 65  VKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH- 123

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW 689
             +R I+HRD+K  NI L  N + K+ DFG+S+    M    ++T   G+  Y+ PE   
Sbjct: 124 --QRRILHRDLKAKNIFLKNNLL-KIGDFGVSRL--LMGSCDLATTFTGTPYYMSPEALK 178

Query: 690 RQQLTEKSDVYSFGVVLFEVVC 711
            Q    KSD++S G +L+E+ C
Sbjct: 179 HQGYDSKSDIWSLGCILYEMCC 200

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 71.8 bits (177), Expect = 2e-13
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 56/173 (32%)

Query: 521 IGVGGFGKVFKGEIEDC-TLAAIKRANPQSEQGLAEFET---------EIEMLSKLRHRH 570
           IG G +G V     +      AIK+ +         F+          EI++L  LRH +
Sbjct: 8   IGSGAYGVVCSAVDKRTGRKVAIKKISN-------VFDDLIDAKRILREIKLLRHLRHEN 60

Query: 571 LVSLIGF-----CDEQNEMILVYEYMANGTLRSHLFGSDL-------PPLTWK------- 611
           ++ L+        ++ N++ +V E M           +DL        PLT         
Sbjct: 61  IIGLLDILRPPSPEDFNDVYIVTELM----------ETDLHKVIKSPQPLTDDHIQYFLY 110

Query: 612 QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG 664
           Q L       RGL YLH+     +IHRD+K +NIL++ N   K+ DFGL++  
Sbjct: 111 QIL-------RGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGV 153

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 71.1 bits (174), Expect = 2e-13
 Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 14/199 (7%)

Query: 521 IGVGGFGKVF------KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSL 574
           +G GGFG+V        G++  C     KR   +S + +A  E EI  L K+    +V+L
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEI--LEKVNSPFIVNL 58

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
               + +  + LV   M  G L+ H++      L  ++ +        G+ +LH      
Sbjct: 59  AYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLH---SMD 115

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
           I++RD+K  N+LLD+    ++SD GL+      +     T   G+ GY+ PE    +  +
Sbjct: 116 IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTI---TQRAGTNGYMAPEILKEEPYS 172

Query: 695 EKSDVYSFGVVLFEVVCAR 713
              D ++ G  ++E+V  R
Sbjct: 173 YPVDWFAMGCSIYEMVAGR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 71.1 bits (174), Expect = 2e-13
 Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 41/274 (14%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           IG G  G V+   ++      AIK+ N Q +        EI ++ + +H ++V+ +    
Sbjct: 27  IGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL 86

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA-----RGLHYLHTGAERG 634
             +E+ +V EY+A G+L      +D+  +T     +  I A      + L +LH+     
Sbjct: 87  VGDELWVVMEYLAGGSL------TDV--VTETCMDEGQIAAVCRECLQALEFLHS---NQ 135

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
           +IHRD+K+ NILL  +   K++DFG      + E +  ST V G+  ++ PE   R+   
Sbjct: 136 VIHRDIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSTMV-GTPYWMAPEVVTRKAYG 193

Query: 695 EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII---DPHLKGN 751
            K D++S G++  E+V       P L ++ +            R+L  I     P L+  
Sbjct: 194 PKVDIWSLGIMAIEMVEGEP---PYLNENPL------------RALYLIATNGTPELQN- 237

Query: 752 YSPESLEK-FGEIAEKCLDDEGKNRPTMGEVLWH 784
             PE L   F +   +CL+ + + R +  E+L H
Sbjct: 238 --PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 71.4 bits (175), Expect = 3e-13
 Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 32/206 (15%)

Query: 520 MIGVGGFGKVFKGEIEDCT-LAAIKRANPQSEQGLAEFETEIEMLSK------LRHRHLV 572
           ++G G FGKV   E++      AIK    + +  L + + E  M+ +        H  L 
Sbjct: 2   VLGKGSFGKVMLAELKGTNEFFAIKAL--KKDVVLEDDDVECTMVERRVLALAWEHPFLT 59

Query: 573 SLIGFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLD---ACIGAAR---GL 624
            L  FC  Q +  +  V EY+  G L  H+  S         R D   A   AA    GL
Sbjct: 60  HL--FCTFQTKEHLFFVMEYLNGGDLMFHIQSS--------GRFDEARARFYAAEIICGL 109

Query: 625 HYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLD 684
            +LH    +GII+RD+K  N+LLD++   K++DFG+ K   + E    ++   G+  Y+ 
Sbjct: 110 QFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGK--ASTFCGTPDYIA 164

Query: 685 PEYFWRQQLTEKSDVYSFGVVLFEVV 710
           PE    Q+  E  D +SFGV+L+E++
Sbjct: 165 PEILKGQKYNESVDWWSFGVLLYEML 190

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 70.7 bits (174), Expect = 3e-13
 Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 27/166 (16%)

Query: 515 FDESLMIGVGGFGKVFKG-EIEDCTLAAIKRAN-PQSEQGLAEFET-EIEMLSKLR---H 568
           ++E   IG G +G V+K  ++      A+K+   P SE+G+      EI +L +L    H
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEH 60

Query: 569 RHLVSLIGFC-----DEQNEMILVYEYMAN--GTLRSHLFGSDLPPLTWK----QRLDAC 617
            ++V L+  C     D + ++ LV+E++     T  S      LPP T K    Q L   
Sbjct: 61  PNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLL--- 117

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT 663
               RG+ +LH+     I+HRD+K  NIL+  +   K++DFGL++ 
Sbjct: 118 ----RGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARI 156

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 70.5 bits (173), Expect = 4e-13
 Identities = 73/294 (24%), Positives = 134/294 (45%), Gaps = 47/294 (15%)

Query: 520 MIGVGGFGKVFKGEIEDC-TLAAIKRANPQSEQGLAE--FETEIEMLSKLRHRHLVSLIG 576
           ++G G +G V K + ++   + AIK+     +  + +     EI ML +LRH +LV+LI 
Sbjct: 8   LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIE 67

Query: 577 FCDEQNEMILVYEYMANGTLRS-HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGI 635
               +  + LV+E++ +  L     + + L     ++ L   +   RG+ + H+     I
Sbjct: 68  VFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQIL---RGIEFCHS---HNI 121

Query: 636 IHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHT-HVSTAVKGSFGYLDPEYFWRQQ 692
           IHRD+K  NIL+ ++ V K+ DFG ++T   P   +T +V+T       Y  PE      
Sbjct: 122 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATR-----WYRAPELLVGDT 176

Query: 693 LTEKS-DVYSFGVVLFEVVCARAVINPTLPKDQ-INLADWAMK------------WQKQR 738
              ++ D+++ G ++ E++       P  P D  I+     +K            +QK  
Sbjct: 177 KYGRAVDIWAVGCLVTEMLTG----EPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNP 232

Query: 739 SLKSIIDPHLKGNYSPESLEK--------FGEIAEKCLDDEGKNRPTMGEVLWH 784
               +  P +K     E LEK          ++A++CL  +  +RP+  ++L H
Sbjct: 233 LFAGMRLPEVK---EIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 70.6 bits (173), Expect = 4e-13
 Identities = 84/286 (29%), Positives = 123/286 (43%), Gaps = 52/286 (18%)

Query: 521 IGVGGFGKV-FKGEIEDCTLAAIKRAN---PQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           IG G FG V F  ++    + AIK+ +    QS +   +   E+  L +LRH + +   G
Sbjct: 23  IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKG 82

Query: 577 FCDEQNEMILVYEYM---ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
               ++   LV EY    A+  L  H       PL   +    C GA +GL YLH+    
Sbjct: 83  CYLREHTAWLVMEYCLGSASDILEVHK-----KPLQEVEIAAICHGALQGLAYLHS---H 134

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ-- 691
             IHRD+K  NILL E    K++DFG S +  S  ++ V T       ++ PE       
Sbjct: 135 ERIHRDIKAGNILLTEPGTVKLADFG-SASLVSPANSFVGTPY-----WMAPEVILAMDE 188

Query: 692 -QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG 750
            Q   K DV+S G+   E+    A   P L     N+   AM      +L      H+  
Sbjct: 189 GQYDGKVDVWSLGITCIEL----AERKPPL----FNMN--AMS-----ALY-----HIAQ 228

Query: 751 NYSPESLEK------FGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
           N SP +L        F    + CL    ++RP+  E+L H  +VL+
Sbjct: 229 NDSP-TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH-RFVLR 272

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 69.8 bits (171), Expect = 7e-13
 Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 16/200 (8%)

Query: 524 GGFGKVFKGEIED-----CTLAAIKR-ANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           G FG++F G + D          +K   +  SE  +     E  +L  L H++++ ++  
Sbjct: 17  GTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHV 76

Query: 578 CDEQNEMILV-YEYMANGTLRSHLFGSDLPP------LTWKQRLDACIGAARGLHYLHTG 630
           C E  E   V Y YM  G L+  L    L        L+ +Q +   I  A G+ YLH  
Sbjct: 77  CIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH-- 134

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
            +RG+IH+D+   N ++DE    K++D  LS+    M++  +         ++  E    
Sbjct: 135 -KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVN 193

Query: 691 QQLTEKSDVYSFGVVLFEVV 710
           ++ +  SDV+SFGV+L+E++
Sbjct: 194 KEYSSASDVWSFGVLLWELM 213

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 69.1 bits (169), Expect = 9e-13
 Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 49/283 (17%)

Query: 521 IGVGGFGKVFKGEIEDC--TLAAIKRA---NPQSEQGLAEFETEIEML--------SKLR 567
           +G G FG V+K   ++    L A+K     NP   +   E +  I  +         +LR
Sbjct: 8   LGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLR 67

Query: 568 HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL---------FGSDLPPLTWKQRLDACI 618
           H ++V       E + + +V + +    L  H          F  +     W   +   +
Sbjct: 68  HPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEER---IWNIFVQMVL 124

Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
                L YLH   E+ I+HRD+   NI+L E+    ++DFGL+K           T+V G
Sbjct: 125 A----LRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKL---TSVVG 175

Query: 679 SFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR 738
           +  Y  PE    +   EK+DV++FG +L+++      + P  P    N+   A K     
Sbjct: 176 TILYSCPEIVKNEPYGEKADVWAFGCILYQM----CTLQP--PFYSTNMLSLATK----- 224

Query: 739 SLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEV 781
            ++++ +P  +G YS    E   ++   CL  + + RP + +V
Sbjct: 225 IVEAVYEPLPEGMYS----EDVTDVITSCLTPDAEARPDIIQV 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 70.1 bits (171), Expect = 9e-13
 Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 21/203 (10%)

Query: 520 MIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLI 575
           ++G G FGKV     K   +   +  +K+    ++  +A   TE  +L   RH  L SL 
Sbjct: 2   LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLK 61

Query: 576 GFCDEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
                ++ +  V EY+  G L  HL     F  D       + + A       L YLH+G
Sbjct: 62  YSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSA-------LDYLHSG 114

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
               I++RD+K  N++LD++   K++DFGL K G +   T  +    G+  YL PE    
Sbjct: 115 K---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFC--GTPEYLAPEVLED 169

Query: 691 QQLTEKSDVYSFGVVLFEVVCAR 713
                  D +  GVV++E++C R
Sbjct: 170 NDYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 69.3 bits (169), Expect = 1e-12
 Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 24/211 (11%)

Query: 515 FDESLMIGVGGFGKV------FKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRH 568
           F +  ++G GGFG+V        G++  C     KR   +  + +A  E +I  L K+  
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQI--LEKVNS 59

Query: 569 RHLVSLIGFCDEQNEMILVYEYMANGTLRSHLF-----GSDLPPLTWKQRLDACIGAARG 623
           R +VSL    + ++ + LV   M  G L+ H++     G +     +      C     G
Sbjct: 60  RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICC-----G 114

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           L  LH   ER I++RD+K  NILLD++   ++SD GL+   P  E   +   V G+ GY+
Sbjct: 115 LEDLHQ--ER-IVYRDLKPENILLDDHGHIRISDLGLAVHVP--EGQTIKGRV-GTVGYM 168

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFEVVCARA 714
            PE    ++ T   D ++ G +L+E++  ++
Sbjct: 169 APEVVKNERYTFSPDWWALGCLLYEMIAGQS 199

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 68.8 bits (168), Expect = 1e-12
 Identities = 82/289 (28%), Positives = 127/289 (43%), Gaps = 44/289 (15%)

Query: 521 IGVGGFGKVFKGEIEDCTLAA---IKR----ANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
           IG G FGKV  GE       A   +K     A P  EQ L  F  E++   +L H +++ 
Sbjct: 3   IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPD-EQLL--FLQEVQPYRELNHPNVLQ 59

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFG-----SDLPPLTWKQRLDACIGAARGLHYLH 628
            +G C E    +LV E+   G L+++L       + +      QR+ AC  A+ GL +LH
Sbjct: 60  CLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRM-ACEVAS-GLLWLH 117

Query: 629 TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG--YLDPE 686
              +   IH D+   N  L  +   K+ D+GL+         +  T    +    +L PE
Sbjct: 118 ---QADFIHSDLALRNCQLTADLSVKIGDYGLALE--QYPEDYYITKDCHAVPLRWLAPE 172

Query: 687 YF-WRQQ------LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS 739
               R Q       T+KS+++S GV ++E+  A     P L  +Q+ L         ++ 
Sbjct: 173 LVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV-LKQVVR----EQD 227

Query: 740 LKSIIDPHLKGNYSPESLEKFGEIAEKC-LDDEGKNRPTMGEVLWHLEY 787
           +K +  P L   YS    +++ E+ + C LD E   RPT  EV   L Y
Sbjct: 228 IK-LPKPQLDLKYS----DRWYEVMQFCWLDPE--TRPTAEEVHELLTY 269

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 68.5 bits (167), Expect = 1e-12
 Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 10/144 (6%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           +G G +G V+K   +    LAA+K    +     +  + EI M+ + +H ++V+  G   
Sbjct: 17  VGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL 76

Query: 580 EQNEMILVYEYMANGTLRS--HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIH 637
            + ++ +  EY   G+L+   H+ G    PL+  Q    C    +GL YLH+   +G +H
Sbjct: 77  SREKLWICMEYCGGGSLQDIYHVTG----PLSELQIAYVCRETLQGLAYLHS---KGKMH 129

Query: 638 RDVKTTNILLDENFVAKMSDFGLS 661
           RD+K  NILL +N   K++DFG++
Sbjct: 130 RDIKGANILLTDNGDVKLADFGVA 153

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 68.7 bits (168), Expect = 1e-12
 Identities = 61/236 (25%), Positives = 100/236 (42%), Gaps = 46/236 (19%)

Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR--SHLFGSDLPPLTWKQRLDA 616
           E++++ + R  ++VS  G    +N + +  E+M  G+L       G    P+     ++ 
Sbjct: 53  ELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGG----PI----PVEI 104

Query: 617 C----IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTH 671
                +    GL YL+      I+HRD+K +NIL++     K+ DFG+S +   S+  T 
Sbjct: 105 LGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTF 162

Query: 672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA 731
           V T+      Y+ PE     + T KSDV+S G+ + E+   +       P    N+ D  
Sbjct: 163 VGTST-----YMSPERIQGGKYTVKSDVWSLGISIIELALGK------FPFAFSNIDDDG 211

Query: 732 MKWQKQRSLKSIID----------PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
                Q     I+D          P L  +  PE L  F    + CL  +   RPT
Sbjct: 212 -----QDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDF---VDACLLKDPTERPT 259

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 69.9 bits (171), Expect = 1e-12
 Identities = 70/273 (25%), Positives = 104/273 (38%), Gaps = 65/273 (23%)

Query: 528 KVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV 587
           KV  G  ED     I R              EIE+L  + H ++V      D   E+ ++
Sbjct: 105 KVIYGNHEDTVRRQICR--------------EIEILRDVNHPNVVKCHDMFDHNGEIQVL 150

Query: 588 YEYMANGTLRSH-----LFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
            E+M  G+L         F +D+     +Q L        G+ YLH    R I+HRD+K 
Sbjct: 151 LEFMDGGSLEGTHIADEQFLADVA----RQILS-------GIAYLH---RRHIVHRDIKP 196

Query: 643 TNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTE------ 695
           +N+L++     K++DFG+S+    +M+  + S    G+  Y+ PE      L        
Sbjct: 197 SNLLINSAKNVKIADFGVSRILAQTMDPCNSSV---GTIAYMSPERI-NTDLNHGAYDGY 252

Query: 696 KSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII----DPHLKGN 751
             D++S GV + E    R       P       DWA       SL   I     P     
Sbjct: 253 AGDIWSLGVSILEFYLGR------FPFGVGRQGDWA-------SLMCAICMSQPPEAPAT 299

Query: 752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
            S E    F      CL  E   R +  ++L H
Sbjct: 300 ASRE----FRHFISCCLQREPAKRWSAMQLLQH 328

Length = 353

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 68.5 bits (167), Expect = 1e-12
 Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 12/194 (6%)

Query: 521 IGVGGFGKVFKG-----EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLI 575
           +G G FG V KG     + E      I + +        E   E  ++ +L + ++V +I
Sbjct: 3   LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMI 62

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGI 635
           G C+ ++ M LV E    G L  + F      +T K   +     + G+ YL    E   
Sbjct: 63  GICEAESWM-LVMELAELGPL--NKFLQKNKHVTEKNITELVHQVSMGMKYLE---ETNF 116

Query: 636 IHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH-VSTAVKGSFGYLDPEYFWRQQLT 694
           +HRD+   N+LL     AK+SDFGLSK   + E+ +   T  K    +  PE     + +
Sbjct: 117 VHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFS 176

Query: 695 EKSDVYSFGVVLFE 708
            KSDV+SFGV+++E
Sbjct: 177 SKSDVWSFGVLMWE 190

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 68.5 bits (167), Expect = 1e-12
 Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 27/206 (13%)

Query: 520 MIGVGGFGKVF--KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           ++G G FG+    +    D   A  +   P+S   + +   E  +L+K++H ++V+    
Sbjct: 7   VVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKES 66

Query: 578 CDEQNEMILVYEYMANGTL-------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
            +    + +V EY   G L       R  LF  D   L W  ++  C+G    + ++H  
Sbjct: 67  FEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTI-LQWFVQM--CLG----VQHIH-- 117

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSK--TGP-SMEHTHVSTAVKGSFGYLDPEY 687
            E+ ++HRD+K+ NI L +N   K+ DFG ++  T P +   T+V T       Y+ PE 
Sbjct: 118 -EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPY-----YVPPEI 171

Query: 688 FWRQQLTEKSDVYSFGVVLFEVVCAR 713
           +       KSD++S G +L+E+   +
Sbjct: 172 WENMPYNNKSDIWSLGCILYELCTLK 197

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 69.1 bits (169), Expect = 2e-12
 Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 5/90 (5%)

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSF 680
           A  L +LH+    GII+RD+K  NILLDE    K++DFGLSK   S++H   + +  G+ 
Sbjct: 108 ALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTV 162

Query: 681 GYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
            Y+ PE   R+  T+ +D +SFGV++FE++
Sbjct: 163 EYMAPEVVNRRGHTQSADWWSFGVLMFEML 192

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 40/225 (17%)

Query: 521 IGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGL-AEFETEIEMLSKLRHRHLVSLIGFC 578
           +G G +  VFKG  +    L A+K    + E+G       E+ +L  L+H ++V+L    
Sbjct: 13  LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII 72

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC-------------IGAARGLH 625
             +  + LV+EY+           SDL     KQ LD C                 RGL 
Sbjct: 73  HTERCLTLVFEYL----------DSDL-----KQYLDNCGNLMSMHNVKIFMFQLLRGLS 117

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDP 685
           Y H   +R I+HRD+K  N+L++E    K++DFGL++       T+ +  V  +  Y  P
Sbjct: 118 YCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVV--TLWYRPP 172

Query: 686 EYFWRQQLTEKS---DVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +       TE S   D++  G +L+E+   R +   +  K++++L
Sbjct: 173 DVLLGS--TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHL 215

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 68.7 bits (168), Expect = 3e-12
 Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 20/199 (10%)

Query: 521 IGVGGFGKVF--KGEIEDCTLA-------AIKRANPQSEQGLAEFETEIEMLSKLRHRHL 571
           IG G FGKV   K + +    A       AI +   Q    +AE      +L  ++H  L
Sbjct: 3   IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHI-MAERNV---LLKNVKHPFL 58

Query: 572 VSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
           V L       +++  V +Y+  G L  HL      P    +   A I +A G  YLH   
Sbjct: 59  VGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALG--YLH--- 113

Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ 691
              II+RD+K  NILLD      ++DFGL K G  +EH+  ++   G+  YL PE   +Q
Sbjct: 114 SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEG--IEHSKTTSTFCGTPEYLAPEVLRKQ 171

Query: 692 QLTEKSDVYSFGVVLFEVV 710
                 D +  G VL+E++
Sbjct: 172 PYDRTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 67.7 bits (165), Expect = 3e-12
 Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 22/213 (10%)

Query: 514 NFDESLMIGVGGFGKVFKG-EIEDCTLAAIKRA--NPQSEQGLAE---FETEIEMLSKLR 567
           N+    ++G G FG+V+   + +     A+K+   +P S++   E    E EI++L  LR
Sbjct: 3   NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR 62

Query: 568 HRHLVSLIGFC---DEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWKQRLDACIGAAR 622
           H  +V   G C    E+ ++ +  EYM  G+++  L  +G+    LT            +
Sbjct: 63  HDRIVQYYG-CLRDPEEKKLSIFVEYMPGGSIKDQLKAYGA----LTENVTRRYTRQILQ 117

Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS--MEHTHVSTAVKGSF 680
           G+ YLH+     I+HRD+K  NIL D     K+ DFG SK   +  M  T + + V G+ 
Sbjct: 118 GVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKS-VTGTP 173

Query: 681 GYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
            ++ PE    +    K+DV+S    + E++  +
Sbjct: 174 YWMSPEVISGEGYGRKADVWSVACTVVEMLTEK 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 68.3 bits (167), Expect = 3e-12
 Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 23/204 (11%)

Query: 520 MIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLI 575
           ++G G FGKV     K   +   +  +K+    ++  +A   TE  +L   RH  L +L 
Sbjct: 2   LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALK 61

Query: 576 GFCDEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWKQRL-DACIGAARGLHYLHT 629
                 + +  V EY   G L  HL     F  D      + R   A I +A  L YLH 
Sbjct: 62  YSFQTHDRLCFVMEYANGGELFFHLSRERVFSED------RARFYGAEIVSA--LGYLH- 112

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW 689
                +++RD+K  N++LD++   K++DFGL K G S   T       G+  YL PE   
Sbjct: 113 --SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLE 168

Query: 690 RQQLTEKSDVYSFGVVLFEVVCAR 713
                   D +  GVV++E++C R
Sbjct: 169 DNDYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 68.2 bits (166), Expect = 3e-12
 Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 31/269 (11%)

Query: 521 IGVGGFGKVFKGEIEDCTLA---AIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           IG G  G VF     D       AIK+ N Q +        EI ++ +L++ ++V+ +  
Sbjct: 27  IGQGASGTVFTAI--DVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDS 84

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIH 637
               +E+ +V EY+A G+L   +  + +      Q    C    + L +LH      +IH
Sbjct: 85  FLVGDELFVVMEYLAGGSLTDVVTETCMDE---AQIAAVCRECLQALEFLHANQ---VIH 138

Query: 638 RDVKTTNILLDENFVAKMSDFGL-SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEK 696
           RD+K+ N+LL  +   K++DFG  ++  P  E +  ST V G+  ++ PE   R+    K
Sbjct: 139 RDIKSDNVLLGMDGSVKLTDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGPK 195

Query: 697 SDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPES 756
            D++S G++  E+V       P L ++ +            R+L  I         +PE 
Sbjct: 196 VDIWSLGIMAIEMVEGEP---PYLNENPL------------RALYLIATNGTPELQNPEK 240

Query: 757 LEK-FGEIAEKCLDDEGKNRPTMGEVLWH 784
           L   F +   +CL+ + + R +  E+L H
Sbjct: 241 LSPIFRDFLNRCLEMDVEKRGSAKELLQH 269

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 68.1 bits (166), Expect = 3e-12
 Identities = 54/205 (26%), Positives = 104/205 (50%), Gaps = 17/205 (8%)

Query: 515 FDESLMIGVGGFGKVFKG----EIEDCTL-AAIKR----ANPQSEQGLAEFETEIEMLSK 565
           F +  ++G G FG V+KG    E E   +  AIK      +P++ +   E   E  +++ 
Sbjct: 9   FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK---EILDEAYVMAS 65

Query: 566 LRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLH 625
           + + H+  L+G C   + + L+ + M  G L  ++       +  +  L+ C+  A+G++
Sbjct: 66  VDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMN 123

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDP 685
           YL    ER ++HRD+   N+L+      K++DFGL+K   + E  + +   K    ++  
Sbjct: 124 YLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMAL 180

Query: 686 EYFWRQQLTEKSDVYSFGVVLFEVV 710
           E    +  T +SDV+S+GV ++E++
Sbjct: 181 ESILHRIYTHQSDVWSYGVTVWELM 205

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 68.0 bits (166), Expect = 3e-12
 Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 30/209 (14%)

Query: 520 MIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSK----LRHRHLVSL 574
           ++G G FGKV    + E   L A+K    + +  L + + E  M  K    L   H    
Sbjct: 2   VLGKGSFGKVMLARLKESGRLYAVKVL--KKDVILQDDDVECTMTEKRILSLARNHPFLT 59

Query: 575 IGFCDEQ--NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD---ACIGAAR---GLHY 626
             +C  Q  + +  V E++  G L  H+  S        +R D   A   AA     L +
Sbjct: 60  QLYCCFQTPDRLFFVMEFVNGGDLMFHIQKS--------RRFDEARARFYAAEITSALMF 111

Query: 627 LHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV-KGSFGYLDP 685
           LH   ++GII+RD+K  N+LLD     K++DFG+ K G        +T+   G+  Y+ P
Sbjct: 112 LH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI---FNGKTTSTFCGTPDYIAP 165

Query: 686 EYFWRQQLTEKSDVYSFGVVLFEVVCARA 714
           E           D ++ GV+L+E++C  A
Sbjct: 166 EILQEMLYGPSVDWWAMGVLLYEMLCGHA 194

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 67.8 bits (165), Expect = 4e-12
 Identities = 74/271 (27%), Positives = 109/271 (40%), Gaps = 33/271 (12%)

Query: 521 IGVGGFGKV-FKGEIEDCTLAAIKR---ANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           IG G FG V F  ++ +  + AIK+   +  QS +   +   E+  L KLRH + +   G
Sbjct: 23  IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGII 636
               ++   LV EY       S L      PL   +      GA +GL YLH+     +I
Sbjct: 83  CYLREHTAWLVMEYCLGSA--SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMI 137

Query: 637 HRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ---QL 693
           HRDVK  NILL E  + K+ DFG      S      +    G+  ++ PE        Q 
Sbjct: 138 HRDVKAGNILLSEPGLVKLGDFG------SASIMAPANXFVGTPYWMAPEVILAMDEGQY 191

Query: 694 TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS 753
             K DV+S G+   E+   +       P   +N         +  S      P L+  + 
Sbjct: 192 DGKVDVWSLGITCIELAERKP------PLFNMNAMSALYHIAQNES------PALQSGHW 239

Query: 754 PESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
            E    F    + CL    ++RPT   +L H
Sbjct: 240 SEYFRNF---VDSCLQKIPQDRPTSEVLLKH 267

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 67.8 bits (166), Expect = 4e-12
 Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 35/250 (14%)

Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+++L +    ++V   G      E+ +  E+M  G+L   L  +   P     ++   +
Sbjct: 49  ELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAV 108

Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHVSTAVK 677
              RGL YL    +  I+HRDVK +NIL++     K+ DFG+S +   SM ++ V     
Sbjct: 109 --LRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----- 159

Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ 737
           G+  Y+ PE       T +SD++S G+ L E+   R  I P   K+   +    +   + 
Sbjct: 160 GTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEA 219

Query: 738 RSLKSIIDPHLKGNYSPESL-----------------------EKFGEIAEKCLDDEGKN 774
           +     +  H     SP  +                       ++F +  +KCL    K 
Sbjct: 220 KESHRPVSGH--PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKE 277

Query: 775 RPTMGEVLWH 784
           R  + E+  H
Sbjct: 278 RADLKELTKH 287

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 66.7 bits (163), Expect = 4e-12
 Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
             ++ + LV EY+  G   S +      P  W ++  A +    G+  LH   +RGIIHR
Sbjct: 67  QSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEV--VLGVEDLH---QRGIIHR 121

Query: 639 DVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSD 698
           D+K  N+L+D+    K++DFGLS+ G        +    G+  YL PE        + SD
Sbjct: 122 DIKPENLLIDQTGHLKLTDFGLSRNG------LENKKFVGTPDYLAPETILGVGDDKMSD 175

Query: 699 VYSFGVVLFE 708
            +S G V+FE
Sbjct: 176 WWSLGCVIFE 185

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 67.7 bits (166), Expect = 5e-12
 Identities = 81/311 (26%), Positives = 125/311 (40%), Gaps = 61/311 (19%)

Query: 521 IGVGGFGKVFKGEIEDC---TLAAIKRANPQSEQGLAEFET--EIEMLSKLRHRHLVSLI 575
           IG G +G V              AIK+ +P   Q   +  T  EI++L + +H +++ ++
Sbjct: 13  IGEGAYGMVCSAT--HKPTGVKVAIKKISPFEHQTFCQ-RTLREIKILRRFKHENIIGIL 69

Query: 576 -----GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL--DAC------IGAAR 622
                   +  N++ +V E M           +DL  L   Q L  D        I   R
Sbjct: 70  DIIRPPSFESFNDVYIVQELME----------TDLYKLIKTQHLSNDHIQYFLYQI--LR 117

Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK-TGPSMEHTHVSTAVKGSFG 681
           GL Y+H+     ++HRD+K +N+LL+ N   K+ DFGL++   P  +HT   T    +  
Sbjct: 118 GLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRW 174

Query: 682 YLDPEYFWRQQLTEKS-DVYSFGVVLFEVVCARAVINPTLP----KDQINLADWAMKWQK 736
           Y  PE     +   K+ D++S G +L E++  R    P  P      Q+NL    +    
Sbjct: 175 YRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNR----PLFPGKDYLHQLNLILGVLGTPS 230

Query: 737 QRSLKSIIDPHLKG------NYSPESLEK-FGEIAEKCLDDEGK-------NRPTMGEVL 782
           Q  L  II    +               K F     K LD   K        R T+ E L
Sbjct: 231 QEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEAL 290

Query: 783 WHLEYVLQLHE 793
            H  Y+ Q H+
Sbjct: 291 AH-PYLEQYHD 300

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 66.5 bits (163), Expect = 6e-12
 Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 20/201 (9%)

Query: 521 IGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLI- 575
           +GVGGFG+V     K +     L  +K+ +           +E E+L +  H  +V L  
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR 60

Query: 576 GFCDEQNEMILVY---EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
            F D++     +Y   EY   G L + L    L      +   AC+  A    YLH    
Sbjct: 61  TFKDKKY----IYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLA--FEYLH---N 111

Query: 633 RGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           RGII+RD+K  N+LLD N   K+ DFG +K   S + T   T   G+  Y+ PE    + 
Sbjct: 112 RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTW--TFC-GTPEYVAPEIILNKG 168

Query: 693 LTEKSDVYSFGVVLFEVVCAR 713
                D +S G++L+E++  R
Sbjct: 169 YDFSVDYWSLGILLYELLTGR 189

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 67.1 bits (164), Expect = 6e-12
 Identities = 68/232 (29%), Positives = 109/232 (46%), Gaps = 30/232 (12%)

Query: 515 FDESLMIGVGGFGKVFKGEIEDC-TLAAIKRANPQSE-QGLAEFET-EIEMLSKLRHRHL 571
           FD    IG G +G+V+K   +D   L A+K+    +E +G       EI++L +L HR++
Sbjct: 9   FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNI 68

Query: 572 VSL----------IGFCDEQNEMILVYEYMAN---GTLRSHL--FGSDLPPLTWKQRLDA 616
           V+L          + F  ++    LV+EYM +   G L S L  F  D      KQ L+ 
Sbjct: 69  VNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLE- 127

Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
                 GL+Y H   ++  +HRD+K +NILL+     K++DFGL++   S E    +  V
Sbjct: 128 ------GLNYCH---KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKV 178

Query: 677 KGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
             +  Y  PE     ++     DV+S G +L E+   + +        Q+ L
Sbjct: 179 I-TLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLEL 229

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 66.7 bits (163), Expect = 6e-12
 Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 31/180 (17%)

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG 681
           + L YLH+  +  +IHRDVK +N+L++ N   K+ DFG+S     +  +   T   G   
Sbjct: 114 KALEYLHS--KLSVIHRDVKPSNVLINRNGQVKLCDFGISG---YLVDSVAKTIDAGCKP 168

Query: 682 YLDPEYF----WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ 737
           Y+ PE       ++    KSDV+S G+ + E+   R       P D      W   +Q+ 
Sbjct: 169 YMAPERINPELNQKGYDVKSDVWSLGITMIELATGR------FPYDS-----WKTPFQQ- 216

Query: 738 RSLKSIID---PHL-KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE 793
             LK +++   P L    +SPE    F +   KCL    K RP   E+L H  + L L +
Sbjct: 217 --LKQVVEEPSPQLPAEKFSPE----FQDFVNKCLKKNYKERPNYPELLQHPFFELHLSK 270

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 66.0 bits (161), Expect = 9e-12
 Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 33/214 (15%)

Query: 517 ESLMIGVGGFGKVFKG---EIED-----CTLAAIKRANPQSEQGLAEFETEIEMLSKLRH 568
           ESL  G G F K+FKG   E+ D      T   +K  +         F     M+S+L H
Sbjct: 1   ESL--GQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSH 58

Query: 569 RHLVSLIGFCDEQNEMILVYEYMANGTLRSHL-FGSDLPPLTWKQRLDACIGAARGLHYL 627
           +HLV   G C   +E I+V EY+  G+L ++L    +L  ++WK  L+     A  LH+L
Sbjct: 59  KHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWK--LEVAKQLAWALHFL 116

Query: 628 HTGAERGIIHRDVKTTNILLDEN---------FVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
               ++G+ H +V   N+LL            F+ K+SD G+S T    E       +  
Sbjct: 117 E---DKGLTHGNVCAKNVLLIREEDRKTGNPPFI-KLSDPGISITVLPKE------ILLE 166

Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVC 711
              ++ PE     Q L+  +D +SFG  L+E+  
Sbjct: 167 RIPWVPPECIENPQNLSLAADKWSFGTTLWEIFS 200

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 66.2 bits (161), Expect = 1e-11
 Identities = 71/310 (22%), Positives = 128/310 (41%), Gaps = 52/310 (16%)

Query: 521 IGVGGFGKVFKG--EIEDCTLAAIKRANPQSEQGL-AEFETEIEMLSKLRHRHLVSLIGF 577
           +G G +  V+KG  ++ D  L A+K    + E+G       E+ +L  L+H ++V+L   
Sbjct: 14  LGEGTYATVYKGRSKLTD-NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 72

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC-------------IGAARGL 624
              +  + LV+EY+            DL     KQ LD C                 RGL
Sbjct: 73  IHTEKSLTLVFEYL----------DKDL-----KQYLDDCGNSINMHNVKLFLFQLLRGL 117

Query: 625 HYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLD 684
           +Y H    R ++HRD+K  N+L++E    K++DFGL++       T+ +  V  +  Y  
Sbjct: 118 NYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVV--TLWYRP 172

Query: 685 PEYFW-RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI 743
           P+        + + D++  G + +E+   R +   +  ++Q++     +    + +   I
Sbjct: 173 PDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI 232

Query: 744 I-DPHLKG----NYSPESLEKFG--------EIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
           + +   K      Y  + L            E+  K L  EG+ R +  E + H  Y   
Sbjct: 233 LSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHP-YFHC 291

Query: 791 LHEAWMRTDD 800
           L E   +  D
Sbjct: 292 LGERIHKLPD 301

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 66.4 bits (162), Expect = 1e-11
 Identities = 77/342 (22%), Positives = 133/342 (38%), Gaps = 93/342 (27%)

Query: 521 IGVGGFGKVFK------GEIEDCTLAAIKR----ANPQSEQGLAEFETEIEMLSKL-RHR 569
           +G G FGKV +       +   C   A+K     A     + L    TE+++L  +  H 
Sbjct: 15  LGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALM---TELKILIHIGHHL 71

Query: 570 HLVSLIGFCDEQN-EMILVYEYMANGTLRSHL----------------FGSDLPPLTWKQ 612
           ++V+L+G C +    ++++ EY   G L ++L                          KQ
Sbjct: 72  NVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQ 131

Query: 613 RLDACIGA-------------------------------------------ARGLHYLHT 629
           RLD+   +                                           ARG+ +L  
Sbjct: 132 RLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFL-- 189

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW 689
            A R  IHRD+   NILL EN V K+ DFGL++              +    ++ PE  +
Sbjct: 190 -ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIF 248

Query: 690 RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK 749
            +  T +SDV+SFGV+L+E+    A   P +  D+    ++  + ++   ++        
Sbjct: 249 DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE----EFCRRLKEGTRMR-------- 296

Query: 750 GNYSPE-SLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
              +PE +  +   I   C  +  ++RPT  E++  L  +LQ
Sbjct: 297 ---APEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 65.9 bits (161), Expect = 1e-11
 Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 34/165 (20%)

Query: 514 NFDESLMIGVGGFGKVFKG-EIEDCTLAAIKRANPQSE-QGLAEFET-EIEMLSKLRHRH 570
            +++   IG G +G VFK    E   + A+KR     + +G+      EI +L +L+H++
Sbjct: 1   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 60

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA--------- 621
           +V L        ++ LV+EY             DL     K+  D+C G           
Sbjct: 61  IVRLYDVLHSDKKLTLVFEYC----------DQDL-----KKYFDSCNGDIDPEIVKSFM 105

Query: 622 ----RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK 662
               +GL + H      ++HRD+K  N+L+++N   K++DFGL++
Sbjct: 106 FQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLAR 147

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 65.8 bits (160), Expect = 1e-11
 Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 20/205 (9%)

Query: 515 FDESLMIGVGGFGKV------FKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRH 568
           F    ++G GGFG+V        G++  C     KR   +  + +A  E  I  L K+  
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRI--LEKVNS 59

Query: 569 RHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR---GLH 625
           R +VSL    + ++ + LV   M  G L+ H++    P    +QR  A   AA    GL 
Sbjct: 60  RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFD-EQR--AIFYAAELCCGLE 116

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDP 685
            L    ER I++RD+K  NILLD+    ++SD GL+   P  E         G+ GY+ P
Sbjct: 117 DLQR--ER-IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRV---GTVGYMAP 170

Query: 686 EYFWRQQLTEKSDVYSFGVVLFEVV 710
           E    ++ T   D +  G +++E++
Sbjct: 171 EVINNEKYTFSPDWWGLGCLIYEMI 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 66.2 bits (161), Expect = 1e-11
 Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 10/198 (5%)

Query: 520 MIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLI 575
           ++G G FGKV     K       +  +K+    ++  +A   TE  +L   RH  L +L 
Sbjct: 2   LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 61

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGI 635
                 + +  V EY   G L  HL    +      +   A I +A  L YLH  +E+ +
Sbjct: 62  YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYLH--SEKNV 117

Query: 636 IHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTE 695
           ++RD+K  N++LD++   K++DFGL K G  ++         G+  YL PE         
Sbjct: 118 VYRDLKLENLMLDKDGHIKITDFGLCKEG--IKDGATMKTFCGTPEYLAPEVLEDNDYGR 175

Query: 696 KSDVYSFGVVLFEVVCAR 713
             D +  GVV++E++C R
Sbjct: 176 AVDWWGLGVVMYEMMCGR 193

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 65.6 bits (160), Expect = 2e-11
 Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 22/224 (9%)

Query: 514 NFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFET-EIEMLSKLRHRHL 571
           NF +   +G G +  V+KG       + A+K  +  +E+G       EI ++ +L+H ++
Sbjct: 1   NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI 60

Query: 572 VSLIGFCDEQNEMILVYEYMANGTLR---SHLFGSDLPPLTWK----QRLDACIGAARGL 624
           V L      +N+++LV+EYM     +   +H     L P T K    Q L       +G+
Sbjct: 61  VRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLL-------KGI 113

Query: 625 HYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLD 684
            + H   E  ++HRD+K  N+L+++    K++DFGL++      +T  +  V  +  Y  
Sbjct: 114 AFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVV--TLWYRA 168

Query: 685 PEYFWRQQLTEKS-DVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           P+     +    S D++S G ++ E++  R +   T  +DQ+  
Sbjct: 169 PDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLK 212

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 65.4 bits (159), Expect = 2e-11
 Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFET--EIEMLSKLR---HRHLVSL 574
           IGVG +G V+K  +       A+K    Q+ +      T  E+ +L +L    H ++V L
Sbjct: 8   IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRL 67

Query: 575 IGFC-----DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHT 629
           +  C     D + ++ LV+E++ +  LR++L     P L  +   D      RGL +LH 
Sbjct: 68  MDVCATSRTDRETKVTLVFEHV-DQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHA 126

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS-TAVKGSFGYLDPEYF 688
                I+HRD+K  NIL+      K++DFGL++    +    ++ T V  +  Y  PE  
Sbjct: 127 NC---IVHRDLKPENILVTSGGQVKLADFGLAR----IYSCQMALTPVVVTLWYRAPEVL 179

Query: 689 WRQQLTEKSDVYSFGVVLFEV 709
            +       D++S G +  E+
Sbjct: 180 LQSTYATPVDMWSVGCIFAEM 200

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 65.9 bits (160), Expect = 2e-11
 Identities = 79/288 (27%), Positives = 123/288 (42%), Gaps = 44/288 (15%)

Query: 515 FDESLMIGVGGFGKV-FKGEIEDCTLAAIKR---ANPQSEQGLAEFETEIEMLSKLRHRH 570
           F +   IG G FG V F  ++    + AIK+   +  QS +   +   E++ L +++H +
Sbjct: 27  FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN 86

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
            +   G    ++   LV EY       S L      PL   +      GA +GL YLH+ 
Sbjct: 87  SIEYKGCYLREHTAWLVMEYCLGSA--SDLLEVHKKPLQEVEIAAITHGALQGLAYLHS- 143

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
               +IHRD+K  NILL E    K++DFG S +  S  ++ V T       ++ PE    
Sbjct: 144 --HNMIHRDIKAGNILLTEPGQVKLADFG-SASIASPANSFVGTPY-----WMAPEVILA 195

Query: 691 Q---QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH 747
               Q   K DV+S G+   E+    A   P L     N+   +  +            H
Sbjct: 196 MDEGQYDGKVDVWSLGITCIEL----AERKPPL----FNMNAMSALY------------H 235

Query: 748 LKGNYSP-----ESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
           +  N SP     E  + F    + CL    ++RPT  E+L H+ +VL+
Sbjct: 236 IAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM-FVLR 282

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 65.8 bits (160), Expect = 2e-11
 Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 21/203 (10%)

Query: 520 MIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLI 575
           ++G G FGKV     K       +  +++    ++  +A   TE  +L   RH  L +L 
Sbjct: 2   LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 61

Query: 576 GFCDEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
                 + +  V EY   G L  HL     F  +       + + A       L YLH+ 
Sbjct: 62  YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA-------LEYLHS- 113

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
             R +++RD+K  N++LD++   K++DFGL K G S   T  +    G+  YL PE    
Sbjct: 114 --RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC--GTPEYLAPEVLED 169

Query: 691 QQLTEKSDVYSFGVVLFEVVCAR 713
                  D +  GVV++E++C R
Sbjct: 170 NDYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 65.5 bits (160), Expect = 2e-11
 Identities = 47/171 (27%), Positives = 70/171 (40%), Gaps = 34/171 (19%)

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHVSTAVKGSFGY 682
           LHYL    + G+IHRDVK +NILLD +   K+ DFG+S +   S   T       G   Y
Sbjct: 127 LHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTR----SAGCAAY 180

Query: 683 LDPEYFWRQQLTEK----SDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR 738
           + PE         K    +DV+S G+ L E+   +       P       ++ +      
Sbjct: 181 MAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ------FPYKNCK-TEFEV------ 227

Query: 739 SLKSIID-----PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
            L  I+            +SP+    F    + CL  + + RP   E+L H
Sbjct: 228 -LTKILQEEPPSLPPNEGFSPD----FCSFVDLCLTKDHRKRPKYRELLQH 273

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 65.1 bits (158), Expect = 2e-11
 Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 38/264 (14%)

Query: 515 FDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLV 572
           F+   ++G G +G+V+KG  ++   LAAIK  +   ++   E + EI ML K   HR++ 
Sbjct: 8   FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIA 66

Query: 573 SLIGFCDEQN------EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHY 626
           +  G   ++N      ++ LV E+   G++   +  +    L  +     C    RGL +
Sbjct: 67  TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSH 126

Query: 627 LHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT-HVSTAVKGSFGYLDP 685
           LH   +  +IHRD+K  N+LL EN   K+ DFG+S     ++ T        G+  ++ P
Sbjct: 127 LH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSA---QLDRTVGRRNTFIGTPYWMAP 180

Query: 686 EYFWRQQLTE-----KSDVYSFGVVLFEV------VC----ARAV-INPTLPKDQINLAD 729
           E     +  +     KSD++S G+   E+      +C     RA+ + P  P  ++    
Sbjct: 181 EVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKK 240

Query: 730 WAMKWQKQRSLKSIIDPHLKGNYS 753
           W+ K+Q      S I+  L  N+S
Sbjct: 241 WSKKFQ------SFIESCLVKNHS 258

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 65.9 bits (160), Expect = 2e-11
 Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 12/200 (6%)

Query: 520 MIGVGGFGKVFKGEIEDC----TLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSL 574
           +IG G + KV    ++       +  +K+     ++ +   +TE  +  +   H  LV L
Sbjct: 2   VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 61

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
                 ++ +  V EY+  G L  H+      P    +   A I  A  L+YLH   ERG
Sbjct: 62  HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH---ERG 116

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
           II+RD+K  N+LLD     K++D+G+ K G  +     ++   G+  Y+ PE    +   
Sbjct: 117 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSTFCGTPNYIAPEILRGEDYG 174

Query: 695 EKSDVYSFGVVLFEVVCARA 714
              D ++ GV++FE++  R+
Sbjct: 175 FSVDWWALGVLMFEMMAGRS 194

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 65.2 bits (159), Expect = 2e-11
 Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 21/210 (10%)

Query: 514 NFDESLMIGVGGFGKVF----KGEIEDCTLAAIKRANP----QSEQGLAEFETEIEMLSK 565
           NF+   ++G G +GKVF     G  +   L A+K        Q  +      TE ++L  
Sbjct: 1   NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEA 60

Query: 566 LRHR-HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGL 624
           +R    LV+L        ++ L+ +Y+  G L +HL+  +    +  +   A I  A  L
Sbjct: 61  VRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLA--L 118

Query: 625 HYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK--TGPSMEHTHVSTAVKGSFGY 682
            +LH   + GII+RD+K  NILLD      ++DFGLSK       E  +   +  G+  Y
Sbjct: 119 DHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAY---SFCGTIEY 172

Query: 683 LDPEYFWRQQLTEKS--DVYSFGVVLFEVV 710
           + PE             D +S GV+ FE++
Sbjct: 173 MAPEVIRGGSGGHDKAVDWWSLGVLTFELL 202

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 64.8 bits (158), Expect = 3e-11
 Identities = 64/281 (22%), Positives = 120/281 (42%), Gaps = 41/281 (14%)

Query: 514 NFDESLMIGVGGFGKV-FKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLV 572
             D  + IG G  G V    +       A+K+ + + +Q       E+ ++   +H ++V
Sbjct: 20  YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIV 79

Query: 573 SLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP---LTWKQRLDACIGAARGLHYLHT 629
            +       +E+ +V E++  G L      +D+     +  +Q    C+   + L +LH 
Sbjct: 80  EMYSSYLVGDELWVVMEFLEGGAL------TDIVTHTRMNEEQIATVCLAVLKALSFLHA 133

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFG----LSKTGPSMEHTHVSTAVKGSFGYLDP 685
              +G+IHRD+K+ +ILL  +   K+SDFG    +SK  P  +      ++ G+  ++ P
Sbjct: 134 ---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRK------SLVGTPYWMAP 184

Query: 686 EYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           E   R     + D++S G+++ E+V       P    +           Q  + ++  + 
Sbjct: 185 EVISRLPYGTEVDIWSLGIMVIEMVDGE----PPYFNEP--------PLQAMKRIRDNLP 232

Query: 746 PHLKG--NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
           P LK     SP  L  F    ++ L  +   R T  E+L H
Sbjct: 233 PKLKNLHKVSPR-LRSF---LDRMLVRDPAQRATAAELLNH 269

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 64.7 bits (158), Expect = 3e-11
 Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 25/167 (14%)

Query: 521 IGVGGFGKVFK-GEIEDCTLAAIKRANPQSEQGLAEFET---EIEMLSKLRHRHLVSLIG 576
           IG G +G VFK    E   + AIK+   +SE      +    EI ML +L+H +LV+LI 
Sbjct: 9   IGEGSYGVVFKCRNRETGQIVAIKKF-VESEDDPVIKKIALREIRMLKQLKHPNLVNLIE 67

Query: 577 FCDEQNEMILVYEYMAN---GTLRSHLFGSD---LPPLTWKQRLDACIGAARGLHYLHTG 630
               + ++ LV+EY  +     L  +  G     +  + W Q L A       +++ H  
Sbjct: 68  VFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIW-QTLQA-------VNFCH-- 117

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSK--TGPSMEHT-HVST 674
            +   IHRDVK  NIL+ +    K+ DFG ++  TGP  ++T +V+T
Sbjct: 118 -KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVAT 163

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 64.8 bits (158), Expect = 3e-11
 Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 45/277 (16%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQG-LAEFETEIEMLSKLRH---RHLVSL 574
           +IG G +G V++G  +    + A+K  N  +    +++ + E+ +LS+LR     ++   
Sbjct: 8   LIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKY 67

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI--GAARGLHYLHTGAE 632
            G   +   + ++ EY   G++R+ +    +      ++  + I       L Y+H   +
Sbjct: 68  YGSYLKGPRLWIIMEYAEGGSVRTLMKAGPI-----AEKYISVIIREVLVALKYIH---K 119

Query: 633 RGIIHRDVKTTNILLDENFVAKMSDFGLS---KTGPSMEHTHVSTAVKGSFGYLDPEYFW 689
            G+IHRD+K  NIL+      K+ DFG++       S   T V T       ++ PE   
Sbjct: 120 VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPY-----WMAPEVIT 174

Query: 690 R-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID--- 745
             +    K+D++S G+ ++E+       NP  P   ++           R++  I     
Sbjct: 175 EGKYYDTKADIWSLGITIYEMATG----NP--PYSDVDAF---------RAMMLIPKSKP 219

Query: 746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
           P L+ N   + L +F  +A  CLD+E K R +  E+L
Sbjct: 220 PRLEDNGYSKLLREF--VA-ACLDEEPKERLSAEELL 253

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 65.0 bits (158), Expect = 3e-11
 Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 36/223 (16%)

Query: 521 IGVGGFGKVFKGEIEDC-TLAAIKRANPQSEQGL-AEFETEIEMLSKLRHRHLVSLIGFC 578
           +G G +  VFKG  +    L A+K    + E+G       E+ +L  L+H ++V+L    
Sbjct: 14  LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIV 73

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC-------------IGAARGLH 625
                + LV+EY+            DL     KQ +D C                 RGL 
Sbjct: 74  HTDKSLTLVFEYL----------DKDL-----KQYMDDCGNIMSMHNVKIFLYQILRGLA 118

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDP 685
           Y H    R ++HRD+K  N+L++E    K++DFGL++       T+ +  V  +  Y  P
Sbjct: 119 YCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVV--TLWYRPP 173

Query: 686 EYFW-RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +      + + + D++  G + FE+   R +   +  +D+++L
Sbjct: 174 DVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHL 216

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 64.8 bits (158), Expect = 4e-11
 Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 31/207 (14%)

Query: 520 MIGVGGFGKVFKGEIEDCT-------LAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHL 571
           ++G GG+GKVF+              +  +K+A   ++++  A  + E  +L  ++H  +
Sbjct: 3   VLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFI 62

Query: 572 VSLIGFCDEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWKQRLDACIGAAR---G 623
           V LI       ++ L+ EY++ G L  HL     F  D           AC   +     
Sbjct: 63  VDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDT----------ACFYLSEISLA 112

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           L +LH    +GII+RD+K  NILLD     K++DFGL K   S+    V+    G+  Y+
Sbjct: 113 LEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKE--SIHEGTVTHTFCGTIEYM 167

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFEVV 710
            PE   R    +  D +S G ++++++
Sbjct: 168 APEILMRSGHGKAVDWWSLGALMYDML 194

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 64.3 bits (156), Expect = 4e-11
 Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 28/216 (12%)

Query: 512 TNNFDESLMIGVGGFGKVFK-GEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHR 569
           T+ ++    IG G +GKV+K    +D +LAA+K  +P S+    E E E  +L  L  H 
Sbjct: 21  TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVD-EEIEAEYNILQSLPNHP 79

Query: 570 HLVSLIGFCDEQNEMI-----LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI------ 618
           ++V   G   + ++++     LV E    G++   + G     L   QRLD  +      
Sbjct: 80  NVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGL----LICGQRLDEAMISYILY 135

Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
           GA  GL +LH      IIHRDVK  NILL      K+ DFG+S    S      +T+V  
Sbjct: 136 GALLGLQHLHNNR---IIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR-LRRNTSVGT 191

Query: 679 SFGYLDPEYFWRQQLTEKS-----DVYSFGVVLFEV 709
            F ++ PE    +Q  + S     DV+S G+   E+
Sbjct: 192 PF-WMAPEVIACEQQYDYSYDARCDVWSLGITAIEL 226

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 64.1 bits (156), Expect = 5e-11
 Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 16/209 (7%)

Query: 514 NFDESLMIGVGGFGKVFKGE-IEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRH 570
           NF +   IG G +G V+K        + A+K  R + ++E   +    EI +L +L H +
Sbjct: 1   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 60

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
           +V L+     +N++ LV+E++ +  L+  +  S L  +             +GL + H  
Sbjct: 61  IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH-- 117

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG--PSMEHTH-VSTAVKGSFGYLDPEY 687
           + R ++HRD+K  N+L++     K++DFGL++    P   +TH V T       Y  PE 
Sbjct: 118 SHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRAPEI 171

Query: 688 FWRQQL-TEKSDVYSFGVVLFEVVCARAV 715
               +  +   D++S G +  E+V  RA+
Sbjct: 172 LLGCKYYSTAVDIWSLGCIFAEMVTRRAL 200

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 64.5 bits (157), Expect = 5e-11
 Identities = 78/343 (22%), Positives = 143/343 (41%), Gaps = 49/343 (14%)

Query: 513 NNFDESLMIGVGGFGKV------FKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL 566
            +FD   ++G G FG+V        G+I    +  +K++   +++ ++ FE E ++LS  
Sbjct: 1   KDFDVKSLVGRGHFGEVQVVREKATGDI--YAMKVMKKSVLLAQETVSFFEEERDILSIS 58

Query: 567 RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPLTWKQRLDACIGA 620
               +  L     +++ + LV EY   G L S L      F  D+      + + A    
Sbjct: 59  NSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLA---- 114

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSF 680
              +H +H   + G +HRD+K  N+L+D     K++DFG S    +      S    G+ 
Sbjct: 115 ---IHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFG-SAARLTANKMVNSKLPVGTP 167

Query: 681 GYLDPEYFWRQQLTEKS------DVYSFGVVLFEVVCARAVINP-TLPKDQINLADWAMK 733
            Y+ PE         K       D +S GV+ +E++  R+  +  T  K   N+ ++   
Sbjct: 168 DYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNF--- 224

Query: 734 WQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEG-KNRPTMGEVLWH-LEYVLQL 791
              QR LK   DP +  ++  + ++      ++ L  EG    P   ++ W+ +   L  
Sbjct: 225 ---QRFLKFPEDPKVSSDFL-DLIQSLLCGQKERLGYEGLCCHPFFSKIDWNNIRNSLPP 280

Query: 792 HEAWMRTDD--------RQNSFSSSQALGEFAEREAEDGQDAP 826
               +++DD         +NS   SQ+     +     G+D P
Sbjct: 281 FVPTLKSDDDTSNFDEPEKNSTRRSQSSTTQLKPNGFSGKDLP 323

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 64.6 bits (158), Expect = 6e-11
 Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 30/220 (13%)

Query: 521 IGVGGFGKVFKGEIEDCTLA--AIKR-ANP-QSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           +G G +G+V     +  T    AIK+ + P QS         E+ +L  + H +++ L+ 
Sbjct: 23  VGSGAYGQVCSA-FDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLD 81

Query: 577 -FC-DEQNEMIL-VYEYMANGTLRSHLFGSDLPPLTWKQRL-DACI-----GAARGLHYL 627
            F      E    VY       L +HL G+DL  +   Q+L D  I        RGL Y+
Sbjct: 82  VFTPASSLEDFQDVY-------LVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYI 134

Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPE- 686
           H+    GIIHRD+K +NI ++E+   K+ DFGL++        +V+T       Y  PE 
Sbjct: 135 HSA---GIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 186

Query: 687 YFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN 726
                   +  D++S G ++ E++  + +   +   DQ+ 
Sbjct: 187 MLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLK 226

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 64.3 bits (156), Expect = 6e-11
 Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 25/190 (13%)

Query: 605 LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG 664
             PLT +  +      ARG+ +L   A R  IHRD+   NILL EN V K+ DFGL++  
Sbjct: 168 KSPLTMEDLICYSFQVARGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLARD- 223

Query: 665 PSMEHTHVSTAVKGS----FGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL 720
               +       KGS      ++ PE  + +  T +SDV+SFGV+L+E+    A   P +
Sbjct: 224 ---IYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGV 280

Query: 721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGE 780
              QIN  ++  + +    +++        N +PE       I   C   + K RPT   
Sbjct: 281 ---QIN-EEFCQRLKDGTRMRA------PENATPE----IYRIMLACWQGDPKERPTFSA 326

Query: 781 VLWHLEYVLQ 790
           ++  L  +LQ
Sbjct: 327 LVEILGDLLQ 336

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 64.3 bits (156), Expect = 6e-11
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 17/184 (9%)

Query: 607 PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS 666
            LT +  +      A+G+ +L   A R  IHRD+   NILL EN V K+ DFGL++    
Sbjct: 175 VLTLEDLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 231

Query: 667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN 726
                     +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P +  D+  
Sbjct: 232 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-- 289

Query: 727 LADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
                   +  R LK           +PE  +   +    C   E   RPT  E++ HL 
Sbjct: 290 --------EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLG 337

Query: 787 YVLQ 790
            +LQ
Sbjct: 338 NLLQ 341

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 64.9 bits (158), Expect = 7e-11
 Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 24/177 (13%)

Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILV---YEYMANGTLRSHLFGSDLPPLTWKQR 613
             EI++L  + HR +++LI     ++ + +V   Y+      L +++  S   PL  +Q 
Sbjct: 134 GREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYKC----DLFTYVDRSG--PLPLEQA 187

Query: 614 LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHV 672
           +         L YLH    RGIIHRDVKT NI LDE   A + DFG + K      H   
Sbjct: 188 ITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLD---AHPD- 240

Query: 673 STAVKGSFGYLD---PEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN 726
           +    G  G L+   PE         K+D++S G+VLFE+    +V N TL   Q+ 
Sbjct: 241 TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEM----SVKNVTLFGKQVK 293

Length = 392

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 63.6 bits (155), Expect = 7e-11
 Identities = 42/149 (28%), Positives = 82/149 (55%), Gaps = 14/149 (9%)

Query: 521 IGVGGFGKVFKGEIEDC-TLAAIKRANPQSE-QGLAEFET-EIEMLSKLRHRHLVSLIGF 577
           IG G +G V+KG  +    + A+K+   +SE +G+      EI +L +L+H ++V L   
Sbjct: 8   IGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDV 67

Query: 578 CDEQNEMILVYEYMANGTLRSHL----FGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
             +++ + L++E+++   L+ +L     G  +     K  L   +   +G+ + H+   R
Sbjct: 68  LMQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQIL---QGILFCHS---R 120

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSK 662
            ++HRD+K  N+L+D   V K++DFGL++
Sbjct: 121 RVLHRDLKPQNLLIDNKGVIKLADFGLAR 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|221187 pfam11721, Malectin, Di-glucose binding within endoplasmic reticulum

 Score = 61.2 bits (149), Expect = 8e-11
 Identities = 49/184 (26%), Positives = 68/184 (36%), Gaps = 40/184 (21%)

Query: 23  KSFLINCGTNSSVNVDGRKWVGDLASNN-------NVTLSSSGIAATTDSLSGDSIYEPL 75
               INCG     + DG  +  D            + T  SS IA TTD          L
Sbjct: 1   VVLAINCGGPEHTDSDGITYEADTYFTGGSADYYVSDTNGSSSIAGTTDPE--------L 52

Query: 76  YKTARVFADGLNYTFEIIA-GNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAP 134
           Y+T R      +Y    +  GNY V LHF    F +  + +  F V   G  +L +F   
Sbjct: 53  YQTERYSPSSFSYYIPCLENGNYTVILHFAEIYFGEDGLGRRVFDVYVQGKLVLKDF--- 109

Query: 135 GEISHRNLYLQSSGGNSSSISLVKEYF-LGVDLDKLMIEF---------IPSKGSFG--F 182
                 ++    +GG   +    KEY  + V    L I F         IP +G +G   
Sbjct: 110 ------DIV-AEAGGKGKTA--HKEYIPVTVTDGTLEIHFYWAGKGTLLIPFRGVYGNPK 160

Query: 183 INAI 186
           I+AI
Sbjct: 161 ISAI 164

Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. Length = 164

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 63.5 bits (154), Expect = 9e-11
 Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 24/171 (14%)

Query: 505 LAEIRVATNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEML 563
           L+ +R     F+   ++G G +G+V+KG  ++   LAAIK  +  +E    E + EI ML
Sbjct: 8   LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMD-VTEDEEEEIKLEINML 66

Query: 564 SKL-RHRHLVSLIG-FCDEQ-----NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA 616
            K   HR++ +  G F  +      +++ LV E+   G++      +DL   T    L  
Sbjct: 67  KKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSV------TDLVKNTKGNALKE 120

Query: 617 ------CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS 661
                 C    RGL +LH      +IHRD+K  N+LL EN   K+ DFG+S
Sbjct: 121 DWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEVKLVDFGVS 168

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 63.5 bits (154), Expect = 9e-11
 Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 17/201 (8%)

Query: 515 FDESLMIGVGGFGKV-FKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
            D  + IG G  G V    E       A+K+ + + +Q       E+ ++    H ++V 
Sbjct: 24  LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVD 83

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           +       +E+ +V E++  G L   +  + +     +Q    C+   R L YLH    +
Sbjct: 84  MYNSYLVGDELWVVMEFLEGGALTDIVTHTRM---NEEQIATVCLSVLRALSYLHN---Q 137

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFG----LSKTGPSMEHTHVSTAVKGSFGYLDPEYFW 689
           G+IHRD+K+ +ILL  +   K+SDFG    +SK  P  +      ++ G+  ++ PE   
Sbjct: 138 GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK------SLVGTPYWMAPEVIS 191

Query: 690 RQQLTEKSDVYSFGVVLFEVV 710
           R     + D++S G+++ E++
Sbjct: 192 RLPYGTEVDIWSLGIMVIEMI 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 63.8 bits (155), Expect = 1e-10
 Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 18/199 (9%)

Query: 520 MIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-----EQGLAEFETEIEMLSKLRHRHLVS 573
           +IG G FGKV   + + D +  A+K    ++     EQ     E  + +L  L+H  LV 
Sbjct: 2   VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNV-LLKNLKHPFLVG 60

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSD--LPPLTWKQRLDACIGAARGLHYLHTGA 631
           L        ++  V +Y+  G L  HL      L P   + R  A    A  + YLH+  
Sbjct: 61  LHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEP---RARFYAA-EVASAIGYLHS-- 114

Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ 691
              II+RD+K  NILLD      ++DFGL K G  +E    ++   G+  YL PE   ++
Sbjct: 115 -LNIIYRDLKPENILLDSQGHVVLTDFGLCKEG--VEPEETTSTFCGTPEYLAPEVLRKE 171

Query: 692 QLTEKSDVYSFGVVLFEVV 710
                 D +  G VL+E++
Sbjct: 172 PYDRTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 63.1 bits (153), Expect = 1e-10
 Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 19/217 (8%)

Query: 521 IGVGGFGKVFKGE--IEDCTLAAIKRANPQSEQGLAEFET--EIEMLSKLR---HRHLVS 573
           IG G +GKVFK           A+KR   Q+ +      T  E+ +L  L    H ++V 
Sbjct: 9   IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 68

Query: 574 LIGFC-----DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLH 628
           L   C     D + ++ LV+E++ +  L ++L     P +  +   D      RGL +LH
Sbjct: 69  LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 127

Query: 629 TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
           +     ++HRD+K  NIL+  +   K++DFGL++           T+V  +  Y  PE  
Sbjct: 128 S---HRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTLWYRAPEVL 181

Query: 689 WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
            +       D++S G +  E+   + +   +   DQ+
Sbjct: 182 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 218

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 63.2 bits (153), Expect = 1e-10
 Identities = 69/267 (25%), Positives = 122/267 (45%), Gaps = 27/267 (10%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           IG G  G V+   +I      AIK+ N Q +        EI ++ + ++ ++V+ +    
Sbjct: 27  IGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 86

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
             +E+ +V EY+A G+L   +  + +      Q    C    + L +LH+     +IHRD
Sbjct: 87  VGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALDFLHSNQ---VIHRD 140

Query: 640 VKTTNILLDENFVAKMSDFGL-SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSD 698
           +K+ NILL  +   K++DFG  ++  P  E +  ST V G+  ++ PE   R+    K D
Sbjct: 141 IKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGPKVD 197

Query: 699 VYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLE 758
           ++S G++  E+V       P L ++ +            R+L  I         +PE L 
Sbjct: 198 IWSLGIMAIEMVEGEP---PYLNENPL------------RALYLIATNGTPELQNPERLS 242

Query: 759 K-FGEIAEKCLDDEGKNRPTMGEVLWH 784
             F +   +CL+ +   R +  E+L H
Sbjct: 243 AVFRDFLNRCLEMDVDRRGSAKELLQH 269

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 62.5 bits (152), Expect = 1e-10
 Identities = 68/234 (29%), Positives = 99/234 (42%), Gaps = 40/234 (17%)

Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL-FGSDLPPLTWK 611
           LA FET   ++S+L H+HLV L G C    E I+V EY+  G L   L    +   L WK
Sbjct: 46  LAFFET-ASLMSQLSHKHLVKLYGVCVRD-ENIMVEEYVKFGPLDVFLHREKNNVSLHWK 103

Query: 612 QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL-----DENFV--AKMSDFGLSKTG 664
             LD     A  LHYL    ++ ++H +V   NIL+     +E +V   K+SD G+  T 
Sbjct: 104 --LDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV 158

Query: 665 PSMEHTHVSTAVKGSFGYLDPEYFWRQQ--LTEKSDVYSFGVVLFEVVCARAVINPTLPK 722
            S E   V         ++ PE     Q  LT  +D +SFG  L E+       N   P 
Sbjct: 159 LSREER-VERI-----PWIAPECIRNGQASLTIAADKWSFGTTLLEICS-----NGEEPL 207

Query: 723 DQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRP 776
             ++ ++    +Q Q  L             P+  E    +  +C   +   RP
Sbjct: 208 STLSSSEKERFYQDQHRLP-----------MPDCAE-LANLINQCWTYDPTKRP 249

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 62.8 bits (153), Expect = 2e-10
 Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 40/174 (22%)

Query: 513 NNFDESLMIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFET---------EIEM 562
           + +++   IG G FG+VFK    +   + A+K+        L E E          EI++
Sbjct: 12  SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKV-------LMENEKEGFPITALREIKI 64

Query: 563 LSKLRHRHLVSLIGFCDEQNEM--------ILVYEYMAN---GTLRSHLFGSDLPPL--T 609
           L  L+H ++V+LI  C  +            LV+E+  +   G L +      L  +   
Sbjct: 65  LQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKV 124

Query: 610 WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT 663
            K  L+       GL+Y+H      I+HRD+K  NIL+ ++ + K++DFGL++ 
Sbjct: 125 MKMLLN-------GLYYIHRNK---ILHRDMKAANILITKDGILKLADFGLARA 168

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 62.9 bits (153), Expect = 2e-10
 Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 26/200 (13%)

Query: 521 IGVGGFGKV----FKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLI- 575
           +G G FG+V     KG  E   +  +K+      + +     E  +L +L H  +V+++ 
Sbjct: 26  LGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMC 85

Query: 576 GFCDEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
            F DE N +  + E++  G L +HL     F +D+      + + A         YLH  
Sbjct: 86  SFQDE-NRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLA-------FEYLH-- 135

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
             + II+RD+K  N+LLD     K++DFG +K  P    T     + G+  YL PE    
Sbjct: 136 -SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFT-----LCGTPEYLAPEVIQS 189

Query: 691 QQLTEKSDVYSFGVVLFEVV 710
           +   +  D ++ GV+L+E +
Sbjct: 190 KGHGKAVDWWTMGVLLYEFI 209

Length = 329

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 63.9 bits (155), Expect = 2e-10
 Identities = 71/291 (24%), Positives = 121/291 (41%), Gaps = 47/291 (16%)

Query: 550 EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLT 609
           E+  A   +E+  L+   H  +V         ++++L+ EY + G L   +         
Sbjct: 106 ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQI--------- 156

Query: 610 WKQRLDACIGAAR---GLHY------LHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL 660
            KQRL   +       GL +      L     R ++HRD+K+ NI L    + K+ DFG 
Sbjct: 157 -KQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGF 215

Query: 661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL 720
           SK         V+++  G+  YL PE + R++ ++K+D++S GV+L+E++        TL
Sbjct: 216 SKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELL--------TL 267

Query: 721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESL---EKFGEIAEKCLDDEGKNRPT 777
            +          K   QR    I+   L G Y P           + +  L      RPT
Sbjct: 268 HR--------PFKGPSQR---EIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPT 316

Query: 778 MGEVLWH--LEYVLQLHEAWMRTDDRQNSFSSSQALGEFAEREAEDGQDAP 826
             ++L    L+YV  L +  +R  +  +     + L +      E G+ AP
Sbjct: 317 TQQLLHTEFLKYVANLFQDIVRHSETISPHDREEILRQL----QESGERAP 363

Length = 478

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 62.2 bits (151), Expect = 2e-10
 Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 14/202 (6%)

Query: 515 FDESLMIGVGGFGKV------FKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRH 568
           F    ++G GGFG+V        G++  C     KR   +  + +A  E +I  L K+  
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQI--LEKVNS 59

Query: 569 RHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLH 628
           R +VSL    + ++ + LV   M  G L+ H++    P    ++ +        GL  LH
Sbjct: 60  RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH 119

Query: 629 TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
              ER I++RD+K  NILLD+    ++SD GL+   P  E   +   V G+ GY+ PE  
Sbjct: 120 R--ER-IVYRDLKPENILLDDYGHIRISDLGLAVEIP--EGETIRGRV-GTVGYMAPEVV 173

Query: 689 WRQQLTEKSDVYSFGVVLFEVV 710
             ++ T   D +  G +++E++
Sbjct: 174 KNERYTFSPDWWGLGCLIYEMI 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 62.7 bits (152), Expect = 2e-10
 Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 12/216 (5%)

Query: 520 MIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSL 574
           +IG G + KV     K   +   +  +K+     ++ +   +TE  +  +   +  LV L
Sbjct: 2   VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGL 61

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
                  + + LV EY+  G L  H+      P    +   A I  A  L++LH   ERG
Sbjct: 62  HSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIA--LNFLH---ERG 116

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
           II+RD+K  N+LLD +   K++D+G+ K G  +     ++   G+  Y+ PE    ++  
Sbjct: 117 IIYRDLKLDNVLLDADGHIKLTDYGMCKEG--LGPGDTTSTFCGTPNYIAPEILRGEEYG 174

Query: 695 EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADW 730
              D ++ GV++FE++  R+  +       +N  D+
Sbjct: 175 FSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDY 210

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 62.0 bits (150), Expect = 2e-10
 Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 17/201 (8%)

Query: 515 FDESLMIGVGGFGKVFKGEIEDC-TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
            D  + IG G  G V    ++    L A+K+ + + +Q       E+ ++   +H ++V 
Sbjct: 22  LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           +       +E+ +V E++  G L   +  + +     +Q    C+   + L  LH    +
Sbjct: 82  MYNSYLVGDELWVVMEFLEGGALTDIVTHTRM---NEEQIAAVCLAVLKALSVLHA---Q 135

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFG----LSKTGPSMEHTHVSTAVKGSFGYLDPEYFW 689
           G+IHRD+K+ +ILL  +   K+SDFG    +SK  P  +      ++ G+  ++ PE   
Sbjct: 136 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK------SLVGTPYWMAPELIS 189

Query: 690 RQQLTEKSDVYSFGVVLFEVV 710
           R     + D++S G+++ E+V
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMV 210

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 62.4 bits (151), Expect = 3e-10
 Identities = 73/272 (26%), Positives = 115/272 (42%), Gaps = 35/272 (12%)

Query: 521 IGVGGFGKV-FKGEIEDCTLAAIKR---ANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           IG G FG V F        + A+K+   +  Q+ +   +   E++ L +L+H + +   G
Sbjct: 29  IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKG 88

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGII 636
              +++   LV EY       S L      PL   +      GA +GL YLH+     +I
Sbjct: 89  CYLKEHTAWLVMEYCLGSA--SDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MI 143

Query: 637 HRDVKTTNILLDENFVAKMSDFG-LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ---Q 692
           HRD+K  NILL E    K++DFG  SK+ P       + +  G+  ++ PE        Q
Sbjct: 144 HRDIKAGNILLTEPGQVKLADFGSASKSSP-------ANSFVGTPYWMAPEVILAMDEGQ 196

Query: 693 LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY 752
              K DV+S G+   E+    A   P L     N+   +  +   ++      P L+ N 
Sbjct: 197 YDGKVDVWSLGITCIEL----AERKPPL----FNMNAMSALYHIAQN----DSPTLQSNE 244

Query: 753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
             +S   F    + CL    + RP   E+L H
Sbjct: 245 WTDSFRGF---VDYCLQKIPQERPASAELLRH 273

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 62.0 bits (150), Expect = 3e-10
 Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 27/205 (13%)

Query: 520 MIGVGGFGKVFKG----EIEDCTL-AAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLV 572
           ++G G FG V+KG    + E+  +  AIK  R N  S +   E   E  +++ +   ++ 
Sbjct: 14  VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN-TSPKANKEILDEAYVMAGVGSPYVC 72

Query: 573 SLIGFCDEQNEMILVYEYMANGTLRSHL------FGS-DLPPLTWKQRLDACIGAARGLH 625
            L+G C   + + LV + M  G L  ++       GS DL  L W      C+  A+G+ 
Sbjct: 73  RLLGIC-LTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDL--LNW------CVQIAKGMS 123

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDP 685
           YL    E  ++HRD+   N+L+      K++DFGL++     E  + +   K    ++  
Sbjct: 124 YLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMAL 180

Query: 686 EYFWRQQLTEKSDVYSFGVVLFEVV 710
           E    ++ T +SDV+S+GV ++E++
Sbjct: 181 ESILHRRFTHQSDVWSYGVTVWELM 205

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 62.0 bits (151), Expect = 3e-10
 Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 43/235 (18%)

Query: 514 NFDESLMIGVGGFGKVFK------GEIEDCTLAAIKRANPQSEQGLAEFET--EIEMLSK 565
            F++   IG G +G V++      GEI      A+K+    +E+      +  EI +L  
Sbjct: 8   EFEKLNRIGEGTYGIVYRARDTTSGEI-----VALKKVRMDNERDGIPISSLREITLLLN 62

Query: 566 LRHRHLVSL----IGFCDEQNEMILVYEY----MANGTLRSHLFGSDLPPLTWKQRLDAC 617
           LRH ++V L    +G     + + LV EY    +A+      L  +   P +  Q     
Sbjct: 63  LRHPNIVELKEVVVG--KHLDSIFLVMEYCEQDLAS------LLDNMPTPFSESQVKCLM 114

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           +   RGL YLH   E  IIHRD+K +N+LL +    K++DFGL++T            V 
Sbjct: 115 LQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVV- 170

Query: 678 GSFGYLDPE-YFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP----KDQINL 727
            +  Y  PE        T   D+++ G +L E++       P LP     +Q++L
Sbjct: 171 -TLWYRAPELLLGCTTYTTAIDMWAVGCILAELL----AHKPLLPGKSEIEQLDL 220

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 61.7 bits (149), Expect = 3e-10
 Identities = 67/267 (25%), Positives = 123/267 (46%), Gaps = 27/267 (10%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           IG G  G V+   ++      AI++ N Q +        EI ++ + ++ ++V+ +    
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
             +E+ +V EY+A G+L   +  + +      Q    C    + L +LH+     +IHRD
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALEFLHSNQ---VIHRD 141

Query: 640 VKTTNILLDENFVAKMSDFGL-SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSD 698
           +K+ NILL  +   K++DFG  ++  P  E +  ST V G+  ++ PE   R+    K D
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGPKVD 198

Query: 699 VYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLE 758
           ++S G++  E++       P L ++ +            R+L  I         +PE L 
Sbjct: 199 IWSLGIMAIEMIEGEP---PYLNENPL------------RALYLIATNGTPELQNPEKLS 243

Query: 759 K-FGEIAEKCLDDEGKNRPTMGEVLWH 784
             F +   +CLD + + R +  E+L H
Sbjct: 244 AIFRDFLNRCLDMDVEKRGSAKELLQH 270

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 62.5 bits (152), Expect = 4e-10
 Identities = 65/231 (28%), Positives = 101/231 (43%), Gaps = 46/231 (19%)

Query: 521 IGVGGFGKVFK-GEIEDCTLAAIKRANPQSEQGLAEFET---EIEMLSKLRHRHLVSLI- 575
           IG G FG V+   +  D    A+K+  P   Q L   +    E++ML   +H +++S + 
Sbjct: 8   IGYGAFGVVWSVTDPRDGKRVALKKM-PNVFQNLVSCKRVFRELKMLCFFKHDNVLSALD 66

Query: 576 ----GFCDEQNEMILVYEYMANGTLRSHLFGSDL-------PPLTWK-------QRLDAC 617
                  D   E+ +V E M           SDL        PL+         Q L   
Sbjct: 67  ILQPPHIDPFEEIYVVTELMQ----------SDLHKIIVSPQPLSSDHVKVFLYQIL--- 113

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
               RGL YLH+    GI+HRD+K  N+L++ N V K+ DFGL++     E  H++  V 
Sbjct: 114 ----RGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVV 166

Query: 678 GSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
             + Y  PE     +  T   D++S G +  E++  R +     P  Q++L
Sbjct: 167 TQY-YRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDL 216

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 61.4 bits (149), Expect = 4e-10
 Identities = 65/238 (27%), Positives = 104/238 (43%), Gaps = 36/238 (15%)

Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+++L K    ++V   G    +  + +  EYM  G+L   L+   +      + +   I
Sbjct: 49  ELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDK-LYAGGVATEGIPEDVLRRI 107

Query: 619 GAA--RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHVSTA 675
             A  +GL +L    E  IIHRDVK TN+L++ N   K+ DFG+S     S+  T++   
Sbjct: 108 TYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNI--- 162

Query: 676 VKGSFGYLDPEYF------WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
             G   Y+ PE             T +SDV+S G+ + E+   R    P  P+   N+  
Sbjct: 163 --GCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRY---PYPPETYANIFA 217

Query: 730 WAMKWQKQRSLKSIID---PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                     L +I+D   P L   YS ++     +   KCL+     RPT  ++L H
Sbjct: 218 ---------QLSAIVDGDPPTLPSGYSDDA----QDFVAKCLNKIPNRRPTYAQLLEH 262

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 61.5 bits (149), Expect = 4e-10
 Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 34/211 (16%)

Query: 520 MIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSK------LRHR 569
           ++G G FGKV     KG+ E   + A+K+     +  L + + E  M+ K        + 
Sbjct: 2   VLGKGSFGKVLLAELKGKGEYFAVKALKK-----DVVLIDDDVECTMVEKRVLALAWENP 56

Query: 570 HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD---ACIGAAR---G 623
            L  L      +  +  V E++  G L  H+          K R D   A   AA    G
Sbjct: 57  FLTHLYCTFQTKEHLFFVMEFLNGGDLMFHI--------QDKGRFDLYRATFYAAEIVCG 108

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           L +LH+   +GII+RD+K  N++LD +   K++DFG+ K     ++   ++   G+  Y+
Sbjct: 109 LQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNR--ASTFCGTPDYI 163

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFEVVCARA 714
            PE     + T   D +SFGV+L+E++  ++
Sbjct: 164 APEILQGLKYTFSVDWWSFGVLLYEMLIGQS 194

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 61.0 bits (149), Expect = 5e-10
 Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 39/208 (18%)

Query: 521 IGVGGFGKVFKGEIEDC-TLAAIKRANPQSEQGLAEFET-----EIEMLSKL-RHRHLVS 573
           +G G FG V+    ++   L AIK+      +    +E      E++ L KL  H ++V 
Sbjct: 7   LGDGTFGSVYLARNKETGELVAIKKMK----KKFYSWEECMNLREVKSLRKLNEHPNIVK 62

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLF----GSDLPPLTWK----QRLDACIGAARGLH 625
           L     E +E+  V+EYM  G L   L     G        +    Q L        GL 
Sbjct: 63  LKEVFRENDELYFVFEYM-EGNLY-QLMKDRKGKPFSESVIRSIIYQILQ-------GLA 113

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME-HT-HVSTAVKGSFGYL 683
           ++H     G  HRD+K  N+L+    V K++DFGL++   S   +T +VST       Y 
Sbjct: 114 HIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTR-----WYR 165

Query: 684 DPEYFWRQQL-TEKSDVYSFGVVLFEVV 710
            PE   R    +   D+++ G ++ E+ 
Sbjct: 166 APEILLRSTSYSSPVDIWALGCIMAELY 193

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 61.0 bits (148), Expect = 5e-10
 Identities = 61/232 (26%), Positives = 107/232 (46%), Gaps = 31/232 (13%)

Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           +E+E+L K    +++   G    +N + +  E+M  G+L   ++      +  +      
Sbjct: 48  SELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSL--DVYRKIPEHVLGR----IA 101

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHVSTAV 676
           +   +GL YL +     I+HRDVK +N+L++     K+ DFG+S +   S+  T+V    
Sbjct: 102 VAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYV---- 154

Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK 736
            G+  Y+ PE    +Q    SDV+S G+   E+   R    P + K+Q +L    +    
Sbjct: 155 -GTNAYMAPERISGEQYGIHSDVWSLGISFMELALGR-FPYPQIQKNQGSLMPLQL---- 208

Query: 737 QRSLKSIID---PHLK-GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
              L+ I+D   P L  G +S    EKF     +C+  + K RP    ++ H
Sbjct: 209 ---LQCIVDEDPPVLPVGQFS----EKFVHFITQCMRKQPKERPAPENLMDH 253

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 61.0 bits (148), Expect = 7e-10
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 31/284 (10%)

Query: 520 MIGVGGFGKVFKGEIEDC----TLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSL 574
           +IG G + KV   E++       +  IK+     ++ +   +TE  +      H  LV L
Sbjct: 2   VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGL 61

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
                 ++ +  V E+++ G L  H+      P    +   A I  A  L++LH   ERG
Sbjct: 62  HSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNFLH---ERG 116

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
           II+RD+K  N+LLD     K++D+G+ K G  +     ++   G+  Y+ PE    +   
Sbjct: 117 IIYRDLKLDNVLLDAEGHIKLTDYGMCKEG--IRPGDTTSTFCGTPNYIAPEILRGEDYG 174

Query: 695 EKSDVYSFGVVLFEVVCARA---VINPTLPKDQINLADWAMK--WQKQ----RSLKSIID 745
              D ++ GV++FE++  R+   ++  +   DQ N  D+  +   +KQ    RSL     
Sbjct: 175 FSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQ-NTEDYLFQVILEKQIRIPRSLSVKAS 233

Query: 746 PHLKGNYSPESLEKFGEIAEKCLDDEG----KNRPTMGEVLWHL 785
             LKG  + +  E+ G     C    G    K+ P    + W L
Sbjct: 234 SVLKGFLNKDPKERLG-----CHPQTGFRDIKSHPFFRNIDWDL 272

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 60.8 bits (148), Expect = 7e-10
 Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 35/165 (21%)

Query: 521 IGVGGFGKVFKG---EIEDCTLAAIKRANPQSEQGLAEFET---EIEMLSKLRHRHLVSL 574
           IG G +G+V+K      +D    AIK+     EQ     ++   EI +L +L+H ++VSL
Sbjct: 8   IGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSL 67

Query: 575 IGFCDEQNEMI--LVYEYMANGTL-----------RSHLFGSDLPPLTWKQRLDACIGAA 621
           +    E  +    L+++Y A   L           R  +  S +  L W Q L+      
Sbjct: 68  VEVFLEHADKSVYLLFDY-AEHDLWQIIKFHRQAKRVSIPPSMVKSLLW-QILN------ 119

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILL----DENFVAKMSDFGLSK 662
            G+HYLH      ++HRD+K  NIL+     E  V K+ D GL++
Sbjct: 120 -GVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR 160

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 60.5 bits (147), Expect = 8e-10
 Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 8/91 (8%)

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG 681
           + L+YL    E  IIHRDVK +NILLD N   K+ DFG+S     +  +   T   G   
Sbjct: 118 KALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISG---QLVDSIAKTRDAGCRP 172

Query: 682 YLDPEY---FWRQQLTEKSDVYSFGVVLFEV 709
           Y+ PE      R     +SDV+S G+ L+EV
Sbjct: 173 YMAPERIDPSARDGYDVRSDVWSLGITLYEV 203

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 61.3 bits (149), Expect = 8e-10
 Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 29/221 (13%)

Query: 505 LAEIRVATNNFDESLMIGVGGFGKV-FKGEIEDCTLAAIKRANP-----QSEQGLAEFET 558
           + ++R+   +FD   +IG G FG+V          + A+K  +      +S+   A F  
Sbjct: 35  ITKLRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDS--AFFWE 92

Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA 616
           E ++++      +V L      Q++  + +V EYM  G L + +   D+P   W +   A
Sbjct: 93  ERDIMAHANSEWIVQL--HYAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPE-KWARFYTA 149

Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT---HVS 673
            +  A  L  +H+    G IHRDVK  N+LLD++   K++DFG   T   M+        
Sbjct: 150 EVVLA--LDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFG---TCMKMDANGMVRCD 201

Query: 674 TAVKGSFGYLDPEYFWRQ----QLTEKSDVYSFGVVLFEVV 710
           TAV G+  Y+ PE    Q        + D +S GV L+E++
Sbjct: 202 TAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 241

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 60.4 bits (147), Expect = 9e-10
 Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 26/183 (14%)

Query: 538 TLAAIKRAN--PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           TL A+K+ N    S++ L   + EI    +L+H +++  +      +E+ +V   MA G+
Sbjct: 26  TLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85

Query: 596 ----LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF 651
               L++H F   LP L     L         L Y+H    +G IHR VK ++ILL  + 
Sbjct: 86  CEDLLKTH-FPEGLPELAIAFILK---DVLNALDYIH---SKGFIHRSVKASHILLSGDG 138

Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGS-------FGYLDPEYFWRQQL---TEKSDVYS 701
              +S  GL  +   ++H      V            +L PE   +Q L    EKSD+YS
Sbjct: 139 KVVLS--GLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVL-QQNLQGYNEKSDIYS 195

Query: 702 FGV 704
            G+
Sbjct: 196 VGI 198

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 60.4 bits (146), Expect = 1e-09
 Identities = 59/197 (29%), Positives = 89/197 (45%), Gaps = 14/197 (7%)

Query: 520 MIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-----SEQGLAEFETEIEMLSKLRHRHLVS 573
           +IG G FGKV   + + D    A+K    +      EQ     E  + +L  ++H  LV 
Sbjct: 2   VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNV-LLKNVKHPFLVG 60

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           L        ++  V +++  G L  HL      P    +   A I +A G  YLH+    
Sbjct: 61  LHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALG--YLHS---I 115

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL 693
            I++RD+K  NILLD      ++DFGL K G +   T  +T   G+  YL PE   +Q  
Sbjct: 116 NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDT--TTTFCGTPEYLAPEVIRKQPY 173

Query: 694 TEKSDVYSFGVVLFEVV 710
               D +  G VL+E++
Sbjct: 174 DNTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 60.4 bits (146), Expect = 1e-09
 Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 10/166 (6%)

Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+++L +    ++V   G      E+ +  E+M  G+L   L  +   P     ++   I
Sbjct: 53  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVS--I 110

Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHVSTAVK 677
              RGL YL    +  I+HRDVK +NIL++     K+ DFG+S +   SM ++ V     
Sbjct: 111 AVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----- 163

Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
           G+  Y+ PE       + +SD++S G+ L E+   R  I P   K+
Sbjct: 164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE 209

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 60.2 bits (146), Expect = 1e-09
 Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 25/213 (11%)

Query: 521 IGVGGFGKVFKGE--IEDCTLAAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGF 577
           IG G +G V+K    + + T+A  K    Q ++G+      EI +L +++H ++V L   
Sbjct: 10  IGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI--GAARGLHYLHTGAERGI 635
              +  + LV+EY+ +  L+ H+  S  P      RL         RG+ Y H+     +
Sbjct: 70  VHSEKRLYLVFEYL-DLDLKKHMDSS--PDFAKNPRLIKTYLYQILRGIAYCHS---HRV 123

Query: 636 IHRDVKTTNILLDENFVA-KMSDFGLSKTG--PSMEHTH-VSTAVKGSFGYLDPEYFW-R 690
           +HRD+K  N+L+D    A K++DFGL++    P    TH V T       Y  PE     
Sbjct: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVT-----LWYRAPEILLGS 178

Query: 691 QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
           +  +   D++S G +  E+V  +    P  P D
Sbjct: 179 RHYSTPVDIWSVGCIFAEMVNQK----PLFPGD 207

Length = 294

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 60.0 bits (145), Expect = 2e-09
 Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 19/213 (8%)

Query: 508 IRVATNNFDESLMIGVGGFGKV----FKGEIEDCTLAAIKRANPQSEQGLAEFETEIEML 563
           +++   ++D   +IG G FG+V     K   +   +  + +         A F  E +++
Sbjct: 38  LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 97

Query: 564 SKLRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA 621
           +      +V L  FC  Q++  + +V EYM  G L + +   D+P   W +   A +  A
Sbjct: 98  AFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE-KWAKFYTAEVVLA 154

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG 681
             L  +H+    G+IHRDVK  N+LLD++   K++DFG              TAV G+  
Sbjct: 155 --LDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAV-GTPD 208

Query: 682 YLDPEYFWRQ----QLTEKSDVYSFGVVLFEVV 710
           Y+ PE    Q        + D +S GV LFE++
Sbjct: 209 YISPEVLKSQGGDGYYGRECDWWSVGVFLFEML 241

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 59.3 bits (143), Expect = 2e-09
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 22/207 (10%)

Query: 513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFET--EIEMLSKLRHR 569
           +++++   +G G +  V+KG+ + +  L A+K    Q E+G   F    E  +L  L+H 
Sbjct: 5   DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG-TPFTAIREASLLKGLKHA 63

Query: 570 HLVSLIGFCDEQNEMILVYEYMANGT---LRSHLFGSDLPPLTWKQRLDACIGAARGLHY 626
           ++V L      +  + LV+EY+       +  H  G  L P   K  L   +   RGL Y
Sbjct: 64  NIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGG--LHPENVKLFLFQLL---RGLSY 118

Query: 627 LHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPE 686
           +H   +R I+HRD+K  N+L+ +    K++DFGL++      HT+ +  V  +  Y  P+
Sbjct: 119 IH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVV--TLWYRPPD 173

Query: 687 YFWRQQLTEKS---DVYSFGVVLFEVV 710
                  TE S   D++  G +  E++
Sbjct: 174 VLLGS--TEYSTCLDMWGVGCIFVEMI 198

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 59.3 bits (144), Expect = 2e-09
 Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 39/170 (22%)

Query: 521 IGVGGFGKVFKG--EIEDCTLAAIKRANPQSEQGLAEFET--EIEMLSKLRHRHLVSLIG 576
           +G G +  V+KG  ++    L A+K    + E+G A F    E  +L  L+H ++V+L  
Sbjct: 13  LGEGSYATVYKGRSKLTG-QLVALKEIRLEHEEG-APFTAIREASLLKDLKHANIVTLHD 70

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA-------------RG 623
               +  + LV+EY+           +DL     KQ +D C G               RG
Sbjct: 71  IIHTKKTLTLVFEYLD----------TDL-----KQYMDDCGGGLSMHNVRLFLFQLLRG 115

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL--SKTGPSMEHTH 671
           L Y H   +R ++HRD+K  N+L+ E    K++DFGL  +K+ PS  +++
Sbjct: 116 LAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSN 162

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 59.2 bits (143), Expect = 2e-09
 Identities = 75/284 (26%), Positives = 121/284 (42%), Gaps = 34/284 (11%)

Query: 521 IGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAE---FETEIEMLSKLRHRHLVSLIG 576
           IG G FGKV  GE+    T A +     +    + E   F  E +    L+H +L+  +G
Sbjct: 3   IGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLG 62

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFG-----SDLPPLTWKQRLDACIGAARGLHYLHTGA 631
            C E    +LV E+   G L+ +L          P  T  QR+ AC   A GL +LH   
Sbjct: 63  QCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRM-AC-EIALGLLHLH--- 117

Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY---- 687
           +   IH D+   N LL  +   K+ D+GLS      ++      +     ++ PE     
Sbjct: 118 KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEV 177

Query: 688 ---FWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII 744
                    T++S+V+S GV ++E+    +     L  +Q+    + ++ Q+ +  K   
Sbjct: 178 HGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV--LTYTVREQQLKLPK--- 232

Query: 745 DPHLKGNYSPESLEKFGEIAEKC-LDDEGKNRPTMGEVLWHLEY 787
            P LK   S    +++ E+ + C L  E   RP+  EV   L Y
Sbjct: 233 -PRLKLPLS----DRWYEVMQFCWLQPE--QRPSAEEVHLLLSY 269

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 60.3 bits (146), Expect = 3e-09
 Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 521 IGVGGFGKVFKGEIEDCT-LAAIK---RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           I  G FGKV+ G  ++ + L A+K   +A+  ++  + + + E + L+  +   +V L  
Sbjct: 12  ISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYY 71

Query: 577 FCDEQNEMILVYEYMANGTLRS--HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
                N + LV EY+  G ++S  H++G     +  K   +     A  L YLH     G
Sbjct: 72  SLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEV----ALALDYLH---RHG 124

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSK 662
           IIHRD+K  N+L+      K++DFGLSK
Sbjct: 125 IIHRDLKPDNMLISNEGHIKLTDFGLSK 152

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 58.5 bits (141), Expect = 4e-09
 Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 16/174 (9%)

Query: 541 AIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           A+K  + + +Q       E+ ++   +H+++V +        E+ ++ E++  G L   +
Sbjct: 50  AVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIV 109

Query: 601 FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG- 659
             + L     +Q    C    + L YLH+   +G+IHRD+K+ +ILL  +   K+SDFG 
Sbjct: 110 SQTRL---NEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGF 163

Query: 660 ---LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
              +SK  P  +      ++ G+  ++ PE   R     + D++S G+++ E+V
Sbjct: 164 CAQISKDVPKRK------SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMV 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 58.9 bits (142), Expect = 4e-09
 Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 12/167 (7%)

Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL-DAC 617
           E+++L +    ++V   G      E+ +  E+M  G+L   L  +   P   +Q L    
Sbjct: 53  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP---EQILGKVS 109

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHVSTAV 676
           I   +GL YL    +  I+HRDVK +NIL++     K+ DFG+S +   SM ++ V    
Sbjct: 110 IAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---- 163

Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
            G+  Y+ PE       + +SD++S G+ L E+   R  I P   K+
Sbjct: 164 -GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKE 209

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 58.1 bits (141), Expect = 5e-09
 Identities = 43/150 (28%), Positives = 81/150 (54%), Gaps = 17/150 (11%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSE-QGLAEFET---EIEMLSKLRHRHLVSLI 575
           IG G +G V+K  +     + A+K+   ++E +G+    T   EI +L +L H ++V L+
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPS--TAIREISLLKELNHPNIVRLL 64

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGS---DLPPLTWKQRLDACIGAARGLHYLHTGAE 632
                +N++ LV+E++ +  L+ ++  S    L P   K  L   +   +G+ Y H+   
Sbjct: 65  DVVHSENKLYLVFEFL-DLDLKKYMDSSPLTGLDPPLIKSYLYQLL---QGIAYCHS--- 117

Query: 633 RGIIHRDVKTTNILLDENFVAKMSDFGLSK 662
             ++HRD+K  N+L+D     K++DFGL++
Sbjct: 118 HRVLHRDLKPQNLLIDREGALKLADFGLAR 147

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 58.4 bits (141), Expect = 5e-09
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 10/132 (7%)

Query: 582 NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGA-ARGLHYLHTGAERGIIHRDV 640
           +++ LV +YM+ G L  HL          + R    I      L +LH   +  I++RD+
Sbjct: 69  SDLYLVTDYMSGGELFWHLQKEGRFS---EDRAKFYIAELVLALEHLH---KYDIVYRDL 122

Query: 641 KTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDV 699
           K  NILLD      + DFGLSK   ++     +    G+  YL PE    ++  T+  D 
Sbjct: 123 KPENILLDATGHIALCDFGLSK--ANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDF 180

Query: 700 YSFGVVLFEVVC 711
           +S GV++FE+ C
Sbjct: 181 WSLGVLVFEMCC 192

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 57.6 bits (140), Expect = 8e-09
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 19/112 (16%)

Query: 559 EIEMLSKLRHRHLVSL--IGFCDEQNEMILVYEYMANG--TLRSHLFGSDLPP----LTW 610
           EI +L KL+H ++V++  +      +++ +V EY+ +   +L   +    L      L  
Sbjct: 54  EINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLM- 112

Query: 611 KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK 662
            Q L        G+ +LH   +  I+HRD+KT+N+LL+   + K+ DFGL++
Sbjct: 113 LQLL-------SGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAR 154

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 57.7 bits (139), Expect = 8e-09
 Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 14/197 (7%)

Query: 520 MIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-----EQGLAEFETEIEMLSKLRHRHLVS 573
           +IG G FGKV     + +    A+K    ++     E+     E  + +L  ++H  LV 
Sbjct: 2   VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNV-LLKNVKHPFLVG 60

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           L       +++  V +Y+  G L  HL   +   L  + R  A    A  L YLH+    
Sbjct: 61  LHFSFQTADKLYFVLDYINGGELFYHL-QRERCFLEPRARFYAA-EIASALGYLHS---L 115

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL 693
            I++RD+K  NILLD      ++DFGL K   ++EH   ++   G+  YL PE   +Q  
Sbjct: 116 NIVYRDLKPENILLDSQGHIVLTDFGLCKE--NIEHNGTTSTFCGTPEYLAPEVLHKQPY 173

Query: 694 TEKSDVYSFGVVLFEVV 710
               D +  G VL+E++
Sbjct: 174 DRTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 58.0 bits (140), Expect = 8e-09
 Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 32/215 (14%)

Query: 514 NFDESLMIGVGGFGKVF----KGEIEDCTLAAIK----RANPQSEQGLAEFETEIEMLSK 565
           NF+   ++G G +GKVF        +   L A+K     A  Q  + +    TE  +L  
Sbjct: 1   NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEH 60

Query: 566 LRHR-HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR-- 622
           +R    LV+L      + ++ L+ +Y++ G + +HL+          QR +      R  
Sbjct: 61  VRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLY----------QRDNFSEDEVRFY 110

Query: 623 ------GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
                  L +LH   + GI++RD+K  NILLD      ++DFGLSK   S E    + + 
Sbjct: 111 SGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLS-EEKERTYSF 166

Query: 677 KGSFGYLDPEYFWRQQLTEKS-DVYSFGVVLFEVV 710
            G+  Y+ PE    +    K+ D +S G+++FE++
Sbjct: 167 CGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELL 201

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 57.3 bits (138), Expect = 1e-08
 Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 16/207 (7%)

Query: 514 NFDESLMIGVGGFGKVFKGEIEDC-TLAAIKRANPQSEQGLAEFETEIEMLSK----LRH 568
           +F+  +++G G FGKV   E +    L AIK    + +  + + + E  M+ K    L+ 
Sbjct: 1   DFNFLMVLGKGSFGKVMLAERKGTDELYAIKIL--KKDVVIQDDDVECTMVEKRVLALQD 58

Query: 569 R--HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHY 626
           +   L  L       + +  V EY+  G L  H+    +      Q +      + GL +
Sbjct: 59  KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISVGLFF 116

Query: 627 LHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPE 686
           LH    RGII+RD+K  N++LD     K++DFG+ K    M     +    G+  Y+ PE
Sbjct: 117 LH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE--HMVDGVTTRTFCGTPDYIAPE 171

Query: 687 YFWRQQLTEKSDVYSFGVVLFEVVCAR 713
               Q   +  D +++GV+L+E++  +
Sbjct: 172 IIAYQPYGKSVDWWAYGVLLYEMLAGQ 198

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 56.9 bits (138), Expect = 1e-08
 Identities = 61/239 (25%), Positives = 94/239 (39%), Gaps = 69/239 (28%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFET--EIEMLSKLR-HRHLVSLIG 576
           IG G F +V K    +     AIK    +  + L +     EI+ L +L  H +++ LI 
Sbjct: 7   IGEGTFSEVLKAQSRKTGKYYAIKCMK-KHFKSLEQVNNLREIQALRRLSPHPNILRLIE 65

Query: 577 FC-DEQN----------EMILVYEYMANGTLRSHLFGSDLPPLTWK----QRLDACIGAA 621
              D +           +M L YE +     R        P    K    Q L       
Sbjct: 66  VLFDRKTGRLALVFELMDMNL-YELIKG---RKRPL----PEKRVKSYMYQLL------- 110

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT----GPSMEHTHVSTAVK 677
           + L ++H     GI HRD+K  NIL+ ++ + K++DFG  +      P  E  ++ST   
Sbjct: 111 KSLDHMH---RNGIFHRDIKPENILIKDD-ILKLADFGSCRGIYSKPPYTE--YISTR-- 162

Query: 678 GSFGYLDPE------YFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPK----DQIN 726
               Y  PE      Y+       K D+++ G V FE++     + P  P     DQI 
Sbjct: 163 ---WYRAPECLLTDGYY-----GPKMDIWAVGCVFFEIL----SLFPLFPGTNELDQIA 209

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 57.7 bits (139), Expect = 1e-08
 Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 13/142 (9%)

Query: 588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL 647
           Y   A    R     ++ P L++   +      A G+ +L   A +  +HRD+   N+L+
Sbjct: 216 YLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFL---ASKNCVHRDLAARNVLI 272

Query: 648 DENFVAKMSDFGLSKTGPSMEHTHVSTAV-KGS----FGYLDPEYFWRQQLTEKSDVYSF 702
            E  + K+ DFGL++     +    S  + KGS      ++ PE  +    T  SDV+SF
Sbjct: 273 CEGKLVKICDFGLAR-----DIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSF 327

Query: 703 GVVLFEVVCARAVINPTLPKDQ 724
           G++L+E+        P LP ++
Sbjct: 328 GILLWEIFTLGGTPYPELPMNE 349

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 56.7 bits (137), Expect = 1e-08
 Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 14/201 (6%)

Query: 514 NFDESLMIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFE---TEIEMLSKLRHR 569
           + +    +G G FG+V    +       A+K         L + +    E  +L ++ H 
Sbjct: 2   DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHP 61

Query: 570 HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHT 629
            ++ L     +Q  + ++ EY+  G L S+L  S     +      + I  A  L YLH+
Sbjct: 62  FIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCA--LEYLHS 119

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW 689
              + I++RD+K  NILLD+    K++DFG +K     +    +  + G+  YL PE   
Sbjct: 120 ---KEIVYRDLKPENILLDKEGHIKLTDFGFAK-----KLRDRTWTLCGTPEYLAPEVIQ 171

Query: 690 RQQLTEKSDVYSFGVVLFEVV 710
            +   +  D ++ G++++E++
Sbjct: 172 SKGHNKAVDWWALGILIYEML 192

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 56.6 bits (136), Expect = 2e-08
 Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 33/183 (18%)

Query: 559 EIEMLSKLRHRHLVSLIGF------CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           E+ +L  ++H +++ L+         +E N++ LV          +HL G+DL  +   Q
Sbjct: 66  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQ 115

Query: 613 RLD------ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS 666
           +L             RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++    
Sbjct: 116 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 172

Query: 667 MEHTHVSTAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ 724
               +V+T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ
Sbjct: 173 EMTGYVATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 226

Query: 725 INL 727
           + L
Sbjct: 227 LKL 229

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 55.8 bits (134), Expect = 3e-08
 Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 15/203 (7%)

Query: 513 NNFDESLMIGVGGFGKVFK-GEIEDCTLAAIKRANPQSEQGLAEFET--EIEMLSKLRHR 569
           N F+   ++G G +G V K    E   + AIK+     E    +  T  E++ML  L+  
Sbjct: 1   NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE 60

Query: 570 HLVSLIGFCDEQNEMILVYEYMANGTLR---SHLFGSDLPPLTWKQRLDACIGAARGLHY 626
           ++V L      + ++ LV+EY+    L        G   PP   +  +   I A   +H+
Sbjct: 61  NIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGV--PPEKVRSYIYQLIKA---IHW 115

Query: 627 LHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPE 686
            H   +  I+HRD+K  N+L+  N V K+ DFG ++      + + +  V   + Y  PE
Sbjct: 116 CH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRW-YRSPE 171

Query: 687 YFWRQQLTEKSDVYSFGVVLFEV 709
                   +  D++S G +L E+
Sbjct: 172 LLLGAPYGKAVDMWSVGCILGEL 194

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional

 Score = 57.1 bits (138), Expect = 3e-08
 Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 41/226 (18%)

Query: 183 INAIEIVPVVDKLFADTINKVGGNDVNFNLS-GRGV--ETMYRLNVGGPEIKPSRDPDL- 238
           I +IEI+ V DK +            NF  S G+GV   T  RL+ G    K   D D  
Sbjct: 165 ILSIEILQVDDKAY------------NFGPSWGQGVILRTAKRLSCGAG--KSKFDEDYS 210

Query: 239 ---W---RMWEADSSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVL 292
              W   R W    ++   + +   I   + I  AS N  +  P  +Y++A   ++T+  
Sbjct: 211 GDHWGGDRFWNRMQTF--GSGSDQAISTENVIKKAS-NAPNFYPESLYQSALVSTDTQP- 266

Query: 293 EKRFNMSWKFEVDPNFDYFVRLHFCEL--VYEKANQRIFRIYINNRTAENNFDIFVQAGG 350
               ++S+  +VDPN +Y V LHF E+        +R+F + IN  TA  + DI   +G 
Sbjct: 267 ----DLSYTMDVDPNRNYSVWLHFAEIDNSITAEGKRVFDVLINGDTAFKDVDIVKMSGE 322

Query: 351 KNRGYHRDYFDAVSSKIETLWIQLGPDTAVGAAGTDALLNGLEIFK 396
           +      +   AVS +  TL I L P       GT A++N +E+F+
Sbjct: 323 RYTALVLNKTVAVSGR--TLTIVLQP-----KKGTHAIINAIEVFE 361

Length = 623

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 55.8 bits (134), Expect = 3e-08
 Identities = 84/308 (27%), Positives = 127/308 (41%), Gaps = 44/308 (14%)

Query: 496 LTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFK-GEIEDCTLAAIKRANPQSEQGLA 554
              +GK          ++ ++    IG G +GKVFK    ++ + AA+K  +P  +    
Sbjct: 1   FPLSGKTIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDID-E 59

Query: 555 EFETEIEMLSKLR-HRHLVSLIGFC---DEQN--EMILVYEYMANGTLRSHLFGSDLPPL 608
           E E E  +L  L  H ++V   G     D +N  ++ LV E    G++   + G     L
Sbjct: 60  EIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGF----L 115

Query: 609 TWKQRLDACI------GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK 662
              +R++  I       A  GL +LH       IHRDVK  NILL      K+ DFG+S 
Sbjct: 116 KRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKLVDFGVSA 172

Query: 663 TGPSMEHTHVSTAVKGSFGYLDPEYF-WRQQL----TEKSDVYSFGVVLFEVVCARAVIN 717
              S      +T+V   F ++ PE     QQL      + DV+S G+   E         
Sbjct: 173 QLTSTRLRR-NTSVGTPF-WMAPEVIACEQQLDSTYDARCDVWSLGITAIE--------- 221

Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLE-KFGEIAEKCLDDEGKNRP 776
             L      LAD        R+L  I        + PE    +F +   KCL  + + RP
Sbjct: 222 --LGDGDPPLAD----LHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRP 275

Query: 777 TMGEVLWH 784
           T+ ++L H
Sbjct: 276 TVSDLLQH 283

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 55.6 bits (134), Expect = 4e-08
 Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 59/279 (21%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQS-EQGLAEFE-TEIEMLSKLRHR-HLVSLIG 576
           IG G +GKV+K  +     L A+K+   +  E+G+      EI +L  L    ++V L+ 
Sbjct: 9   IGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLD 68

Query: 577 F--CDEQN---EMILVYEYMANGTLRSHL------FGSDLPPLTWKQRLDACIGAARGLH 625
               +E+N    + LV+EY+ +  L+  +       G  LP  T K          +G+ 
Sbjct: 69  VEHVEEKNGKPSLYLVFEYL-DSDLKKFMDSNGRGPGRPLPAKTIKS---FMYQLLKGVA 124

Query: 626 YLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSK--TGPSMEHTH-VSTAVKGSFG 681
           + H   + G++HRD+K  N+L+D +  + K++D GL +  + P   +TH + T       
Sbjct: 125 HCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVT-----LW 176

Query: 682 YLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCARAV------------INPTL--PKDQI- 725
           Y  PE        +   D++S G +  E+   + +            I   L  P +Q+ 
Sbjct: 177 YRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW 236

Query: 726 ----NLADWAM--KWQKQRSLKSIIDPHLKGNYSPESLE 758
                L DW    +W+ Q  L   +      + SPE L+
Sbjct: 237 PGVSKLRDWHEFPQWKPQ-DLSRAVP-----DLSPEGLD 269

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 55.9 bits (135), Expect = 4e-08
 Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 11/93 (11%)

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK--- 677
           A GL +LH+   +GII+RD+K  N++LD     K++DFG+ K     E+       +   
Sbjct: 111 AIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCK-----ENIFGGKTTRTFC 162

Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           G+  Y+ PE    Q   +  D ++FGV+L+E++
Sbjct: 163 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 195

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 54.9 bits (132), Expect = 4e-08
 Identities = 80/302 (26%), Positives = 122/302 (40%), Gaps = 71/302 (23%)

Query: 521 IGVGGFGKVFKGEI---EDCTLAAIK--RANPQS-EQGLAEFETEIEMLSKLRHRHLVSL 574
           IG G FGKV   EI          +K  +AN  S EQ   EF  + +    L+H +++  
Sbjct: 3   IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQN--EFLQQGDPYRILQHPNILQC 60

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWK---------QRLDACIGAARGLH 625
           +G C E    +LV+EY   G L+S+L         W          QR+ AC  AA G+ 
Sbjct: 61  LGQCVEAIPYLLVFEYCELGDLKSYLSQEQ-----WHRRNSQLLLLQRM-ACEIAA-GVT 113

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFG--Y 682
           ++H   +   +H D+   N  L  +   K+ D+G+   GPS  +  ++ T         +
Sbjct: 114 HMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGI---GPSRYKEDYIETEDDKCVPLRW 167

Query: 683 LDPEYFWRQQ-------LTEKSDVYSFGVVLFEVV-CA---------RAVINPTLPKDQI 725
           L PE              T+ S+V++ GV L+E+   A         R V+N  +   Q+
Sbjct: 168 LAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQV 227

Query: 726 NLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL 785
            L                  P L+  YS    E++ E+ + C     K R T  EV   L
Sbjct: 228 KL----------------FKPQLELPYS----ERWYEVLQFCWLSPEK-RATAEEVHRLL 266

Query: 786 EY 787
            Y
Sbjct: 267 TY 268

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 54.9 bits (132), Expect = 5e-08
 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 16/93 (17%)

Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL----SKTGPSMEHTHVSTAVKG 678
           GL ++H    R +++RD+K  NILLDE+   ++SD GL    SK  P     H S    G
Sbjct: 109 GLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-----HASV---G 157

Query: 679 SFGYLDPEYFWRQQLTEKS-DVYSFGVVLFEVV 710
           + GY+ PE   +    + S D +S G +LF+++
Sbjct: 158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 190

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 55.3 bits (133), Expect = 5e-08
 Identities = 71/314 (22%), Positives = 127/314 (40%), Gaps = 59/314 (18%)

Query: 515 FDESLMIGVGGFGKVFKG-EIEDCTLAAIKRA-NP-QSEQGLAEFETEIEMLSKLRHRHL 571
           + +   +G G +G V    +       AIK+   P QSE        E+ +L  ++H ++
Sbjct: 17  YRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENV 76

Query: 572 VSLIGF------CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA------CIG 619
           + L+         D  ++  LV  +M          G+DL  L   ++L           
Sbjct: 77  IGLLDVFTPDLSLDRFHDFYLVMPFM----------GTDLGKLMKHEKLSEDRIQFLVYQ 126

Query: 620 AARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGS 679
             +GL Y+H     GIIHRD+K  N+ ++E+   K+ DFGL++   S    +V T     
Sbjct: 127 MLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTR---- 179

Query: 680 FGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN---------LA 728
             Y  PE    W    T+  D++S G ++ E++  + +       DQ+            
Sbjct: 180 -WYRAPEVILNW-MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237

Query: 729 DWAMKWQKQRSLKSIID-PHLKG--------NYSPESLEKFGEIAEKCLDDEGKNRPTMG 779
           ++  K Q + +   +   P  +         N +P ++     + EK L  + ++R T  
Sbjct: 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAV----NVLEKMLVLDAESRITAA 293

Query: 780 EVLWHLEYVLQLHE 793
           E L H  Y  + H+
Sbjct: 294 EALAH-PYFEEFHD 306

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 55.0 bits (132), Expect = 5e-08
 Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 35/208 (16%)

Query: 520 MIGVGGFGKVFKGEIEDC----TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLI 575
           +IG GGFG+V+     D      +  + +   + +QG        E L+ L  R ++SL+
Sbjct: 1   IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG--------ETLA-LNERIMLSLV 51

Query: 576 GFCD------------EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARG 623
              D              +++  + + M  G L  HL  S     + K+          G
Sbjct: 52  STGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHL--SQHGVFSEKEMRFYATEIILG 109

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           L ++H    R +++RD+K  NILLDE+   ++SD GL+    S +  H S    G+ GY+
Sbjct: 110 LEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASV---GTHGYM 162

Query: 684 DPEYFWRQQLTEKS-DVYSFGVVLFEVV 710
            PE   +    + S D +S G +LF+++
Sbjct: 163 APEVLQKGTAYDSSADWFSLGCMLFKLL 190

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 55.3 bits (133), Expect = 6e-08
 Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 25/170 (14%)

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSF 680
           A+G+ +L   A +  IHRD+   NILL    + K+ DFGL++   +  +  V    +   
Sbjct: 224 AKGMSFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPV 280

Query: 681 GYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL 740
            ++ PE  +    T +SDV+S+G++L+E+    +   P +P D         K+ K    
Sbjct: 281 KWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--------KFYKM--- 329

Query: 741 KSIIDPHLKGNY---SPE-SLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
                  +K  Y   SPE +  +  +I + C D +   RPT  +++  +E
Sbjct: 330 -------IKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIE 372

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 55.0 bits (132), Expect = 6e-08
 Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 19/209 (9%)

Query: 514 NFDESLMIGVGGFGKVF---KGEIEDC----TLAAIKRANPQSEQGLAEF-ETEIEMLSK 565
           NF+   ++G G +GKVF   K    D      +  +K+A    +    E   TE ++L  
Sbjct: 1   NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 60

Query: 566 LRHR-HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGA-ARG 623
           +R    LV+L        ++ L+ +Y+  G L +HL  S       +Q +    G     
Sbjct: 61  IRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHL--SQRERFK-EQEVQIYSGEIVLA 117

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           L +LH   + GII+RD+K  NILLD N    ++DFGLSK     E    + +  G+  Y+
Sbjct: 118 LEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDE-VERAYSFCGTIEYM 173

Query: 684 DPEYFWRQQLTEKS--DVYSFGVVLFEVV 710
            P+             D +S GV+++E++
Sbjct: 174 APDIVRGGDGGHDKAVDWWSMGVLMYELL 202

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 55.3 bits (133), Expect = 6e-08
 Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 6/89 (6%)

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG 681
            GL YLH  A+R IIHRDVKT NI +++     + D G ++  P +    +  A  G+  
Sbjct: 168 EGLRYLH--AQR-IIHRDVKTENIFINDVDQVCIGDLGAAQF-PVVAPAFLGLA--GTVE 221

Query: 682 YLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
              PE   R +   K+D++S G+VLFE++
Sbjct: 222 TNAPEVLARDKYNSKADIWSAGIVLFEML 250

Length = 357

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 55.0 bits (132), Expect = 6e-08
 Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 27/207 (13%)

Query: 514 NFDESLMIGVGGFGKVFKGEI--EDCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRH 568
           NF  +L  G G FG+V       ED    AIKR        ++ +    +E ++L+ + H
Sbjct: 33  NFIRTL--GTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH 90

Query: 569 RHLVSLIGFCDEQNEMILVYEYMANGTL-----RSHLFGSDLPPLTWKQRLDACIGAARG 623
              V+L G   +++ + LV E++  G       R+  F +D+           C  AA+ 
Sbjct: 91  PFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDV----------GCFYAAQI 140

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           +          I++RD+K  N+LLD++   KM+DFG +K   +  +T     + G+  Y+
Sbjct: 141 VLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYT-----LCGTPEYI 195

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFEVV 710
            PE        + +D ++ G+ ++E++
Sbjct: 196 APEILLNVGHGKAADWWTLGIFIYEIL 222

Length = 340

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 55.0 bits (133), Expect = 7e-08
 Identities = 48/173 (27%), Positives = 69/173 (39%), Gaps = 27/173 (15%)

Query: 521 IGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           +G G  G+VF    KG  +   L  + +        +    TE E+L+ L H  L +L  
Sbjct: 9   LGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYA 68

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIG--AAR--------GLHY 626
               +  + LV +Y   G L   L          +++   C+    AR         L Y
Sbjct: 69  SFQTETYLCLVMDYCPGGELFRLL----------QRQPGKCLSEEVARFYAAEVLLALEY 118

Query: 627 LHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGS 679
           LH     GI++RD+K  NILL E+    +SDF LSK              KGS
Sbjct: 119 LHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGS 168

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 54.8 bits (132), Expect = 8e-08
 Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 33/229 (14%)

Query: 521 IGVGGFGKVFKGEIEDCTL-AAIKRANPQSEQGLAEFETEIEMLSKLRHRHLV------- 572
           +G G  G VF     DC    A+K+      Q +     EI+++ +L H ++V       
Sbjct: 13  LGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLG 72

Query: 573 -------SLIGFCDEQNEMILVYEYMANG---TLRSHLFGSDLPPLTWKQRLDACIGAAR 622
                    +G   E N + +V EYM       L       +   L   Q L       R
Sbjct: 73  PSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLL-------R 125

Query: 623 GLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSK-TGPSMEHT-HVSTAVKGS 679
           GL Y+H+     ++HRD+K  N+ ++ E+ V K+ DFGL++   P   H  ++S  +   
Sbjct: 126 GLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTK 182

Query: 680 FGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           + Y  P         T+  D+++ G +  E++  + +       +Q+ L
Sbjct: 183 W-YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQL 230

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 55.0 bits (132), Expect = 8e-08
 Identities = 68/315 (21%), Positives = 133/315 (42%), Gaps = 69/315 (21%)

Query: 521 IGVGGFGKV-FKGEIEDCTLAAIK---RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           +G+G FG+V    +++   L A+K   + +  +   +A  + E ++L++  +  +V L  
Sbjct: 9   LGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYY 68

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGII 636
              +++ +  V +Y+  G + S L   ++ P    +   A +  A  +  +H   + G I
Sbjct: 69  SFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLA--IESVH---KMGFI 123

Query: 637 HRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH--------THV---------------- 672
           HRD+K  NIL+D +   K++DFGL  TG    H        +H+                
Sbjct: 124 HRDIKPDNILIDLDGHIKLTDFGLC-TGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSN 182

Query: 673 ----------------------STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
                                 + ++ G+  Y+ PE   R+  T+  D +S GV+LFE++
Sbjct: 183 CRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEML 242

Query: 711 CAR-AVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLD 769
             +   + PT  + Q+ + +W             I P +K   SPE+++   ++   C  
Sbjct: 243 VGQPPFLAPTPTETQLKVINWENTLH--------IPPQVK--LSPEAVDLITKLC--CSA 290

Query: 770 DEGKNRPTMGEVLWH 784
           +E   R    ++  H
Sbjct: 291 EERLGRNGADDIKAH 305

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 54.5 bits (131), Expect = 9e-08
 Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 22/201 (10%)

Query: 520 MIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLS-KLRHRHLVSL 574
           ++G G FGKV     KG  E   +  +K+     +  +    TE  +L+   +H  L +L
Sbjct: 2   VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTAL 61

Query: 575 IGFCDEQNEMILVYEYMANGTL-----RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHT 629
                 ++ +  V EY+  G L     RS  F         + R  A       L +LH 
Sbjct: 62  HCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEP------RSRFYAA-EVTLALMFLHR 114

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW 689
               G+I+RD+K  NILLD     K++DFG+ K G  + +   +T   G+  Y+ PE   
Sbjct: 115 ---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEG--ILNGVTTTTFCGTPDYIAPEILQ 169

Query: 690 RQQLTEKSDVYSFGVVLFEVV 710
             +     D ++ GV+++E++
Sbjct: 170 ELEYGPSVDWWALGVLMYEMM 190

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 54.3 bits (131), Expect = 1e-07
 Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 35/187 (18%)

Query: 559 EIEMLSKLRHRHLVSLIG-FCDEQNEMILVYEYMANGTLRSHLFGSDL-------PPLTW 610
           E+++L   +H +++++         +   VY  M        L  SDL        PLT 
Sbjct: 54  ELKILRHFKHDNIIAIRDILRPPGADFKDVYVVM-------DLMESDLHHIIHSDQPLTE 106

Query: 611 K-------QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK- 662
           +       Q L       RGL Y+H+     +IHRD+K +N+L++E+   ++ DFG+++ 
Sbjct: 107 EHIRYFLYQLL-------RGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARG 156

Query: 663 -TGPSMEHTHVSTAVKGSFGYLDPE-YFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL 720
            +    EH +  T    +  Y  PE      + T   D++S G +  E++  R +     
Sbjct: 157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKN 216

Query: 721 PKDQINL 727
              Q+ L
Sbjct: 217 YVHQLKL 223

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 53.4 bits (128), Expect = 2e-07
 Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 31/204 (15%)

Query: 521 IGVGGFGKVFKGEIEDCT----LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           IG G FGKV +    D      L  I++A+  S   +     E  +L+++    +V L  
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKF 60

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR----------GLHY 626
                 ++ LV  ++  G L  HL           QR +     +R           L  
Sbjct: 61  SFQSPEKLYLVLAFINGGELFHHL-----------QR-EGRFDLSRARFYTAELLCALEN 108

Query: 627 LHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPE 686
           LH   +  +I+RD+K  NILLD      + DFGL K   +M+    +    G+  YL PE
Sbjct: 109 LH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKL--NMKDDDKTNTFCGTPEYLAPE 163

Query: 687 YFWRQQLTEKSDVYSFGVVLFEVV 710
                  T+  D ++ GV+L+E++
Sbjct: 164 LLLGHGYTKAVDWWTLGVLLYEML 187

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 53.5 bits (128), Expect = 2e-07
 Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 29/221 (13%)

Query: 505 LAEIRVATNNFDESLMIGVGGFGKV------FKGEIEDCTLAA----IKRANPQSEQGLA 554
           + ++R+   +++   +IG G FG+V         ++    L +    IKR++       A
Sbjct: 35  IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDS------A 88

Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
            F  E ++++      +V L     +   + +V EYM  G L + +   D+P   W +  
Sbjct: 89  FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFY 147

Query: 615 DA-CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS 673
            A  + A   +H +      G IHRDVK  N+LLD++   K++DFG              
Sbjct: 148 TAEVVLALDAIHSM------GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD 201

Query: 674 TAVKGSFGYLDPEYFWRQ----QLTEKSDVYSFGVVLFEVV 710
           TAV G+  Y+ PE    Q        + D +S GV L+E++
Sbjct: 202 TAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 241

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 52.9 bits (127), Expect = 3e-07
 Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 36/220 (16%)

Query: 513 NNFDESLMIGVGGFGKVFKGEIEDC-TLAAIKRANPQS-------EQGLAEFETEIEMLS 564
            +F+   +I  G +G V+    ++     A+K+ N Q+       +Q   E +    +L+
Sbjct: 1   EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERD----ILT 56

Query: 565 KLRHRHLVSLIGFCDEQNEMILVYEYMANG---TLRSHLFGSDLPPLTWKQRLDACIGAA 621
              +  +VS+    + +  + +V EY+  G   TL  ++    LP    +      + A 
Sbjct: 57  FAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNI--GALPVDMARMYFAETVLA- 113

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG-----PSMEHTHVSTAV 676
             L YLH     GI+HRD+K  N+L+      K++DFGLSK G      ++   H+    
Sbjct: 114 --LEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDT 168

Query: 677 K--------GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
           +        G+  Y+ PE   RQ   +  D ++ G++L+E
Sbjct: 169 REFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYE 208

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 53.1 bits (127), Expect = 3e-07
 Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 21/176 (11%)

Query: 559 EIEMLSKLRHRHLVSLIGF------CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           E+ +L  + H++++SL+         +E  ++ LV E M     +      D   +++  
Sbjct: 70  ELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLL 129

Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS--MEHT 670
               C     G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +  M   
Sbjct: 130 YQMLC-----GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTP 181

Query: 671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN 726
           +V T       Y  PE        E  D++S G ++ E+V    +   T   DQ N
Sbjct: 182 YVVTRY-----YRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWN 232

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 53.1 bits (127), Expect = 4e-07
 Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 27/162 (16%)

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV-KGS 679
           ARG+ +L   A +  +HRD+   N+LL +  + K+ DFGL++     +  H S  V KGS
Sbjct: 247 ARGMEFL---ASKNCVHRDLAARNVLLAQGKIVKICDFGLAR-----DIMHDSNYVSKGS 298

Query: 680 ----FGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ 735
                 ++ PE  +    T  SDV+S+G++L+E+        P +  D       +  + 
Sbjct: 299 TFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD-------STFYN 351

Query: 736 KQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           K +S   +  P    +++ + +    +I  KC + E + RP+
Sbjct: 352 KIKSGYRMAKP----DHATQEVY---DIMVKCWNSEPEKRPS 386

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 52.7 bits (126), Expect = 4e-07
 Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 5/94 (5%)

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSF 680
           A GL +LH+   +GII+RD+K  N++LD     K++DFG+ K   +M     +    G+ 
Sbjct: 111 AIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE--NMWDGVTTKTFCGTP 165

Query: 681 GYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA 714
            Y+ PE    Q   +  D ++FGV+L+E++  +A
Sbjct: 166 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 199

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 52.9 bits (127), Expect = 4e-07
 Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 11/112 (9%)

Query: 602 GSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS 661
             D  PL     L      A+G+ +L   A +  IHRDV   N+LL +  VAK+ DFGL+
Sbjct: 203 TEDSWPLDLDDLLRFSSQVAQGMDFL---ASKNCIHRDVAARNVLLTDGRVAKICDFGLA 259

Query: 662 KTGPSMEHTHVSTAVKGS----FGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           +    M  ++    VKG+      ++ PE  +    T +SDV+S+G++L+E+
Sbjct: 260 RD--IMNDSNY--VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 307

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 52.7 bits (126), Expect = 4e-07
 Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 10/106 (9%)

Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS--MEHTHVSTAVKGSF 680
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +  M   +V T      
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---- 190

Query: 681 GYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN 726
            Y  PE        E  D++S G ++ E++    +   T   DQ N
Sbjct: 191 -YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 52.7 bits (126), Expect = 5e-07
 Identities = 65/310 (20%), Positives = 121/310 (39%), Gaps = 65/310 (20%)

Query: 515 FDESLMIGVGGFGKV-FKGEIEDCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRH 570
           F +   +G+G FG+V    +++   L A+K    +       +A  + E ++L++  +  
Sbjct: 3   FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEW 62

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA-CIGAARGLHYLHT 629
           +V L     +++ +  V +Y+  G + S L    + P    +   A    A   +H +  
Sbjct: 63  VVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKM-- 120

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGL---------SKTGPSMEHTH--------- 671
               G IHRD+K  NIL+D +   K++DFGL         SK   S +H           
Sbjct: 121 ----GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNE 176

Query: 672 ---------------------------VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGV 704
                                      ++ ++ G+  Y+ PE   R   T+  D +S GV
Sbjct: 177 WGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236

Query: 705 VLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIA 764
           +L+E++  +    P L +  +      + WQ    +        +   SPE+ +   ++ 
Sbjct: 237 ILYEMLVGQP---PFLAQTPLETQMKVINWQTSLHIP------PQAKLSPEASDLIIKLC 287

Query: 765 EKCLDDEGKN 774
               D  GKN
Sbjct: 288 RGPEDRLGKN 297

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 52.3 bits (125), Expect = 5e-07
 Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 48/238 (20%)

Query: 513 NNFDESLMIGVGGFGKVFKGEIEDC----TLAAIKRANPQSEQGLAEFETEIEMLSKLRH 568
           ++F+   +IG G FG+V   + +D      +  +++A+   ++ +A    E ++L +   
Sbjct: 1   DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG 60

Query: 569 RHLVSLI-GFCDEQNEMILVYEYMANGTLRSHLFGSD-LPPLTWKQRLDACIGAARGLHY 626
             +V +   F D++N + L+ E++  G + + L   D L     +  +   + A   +H 
Sbjct: 61  AWVVKMFYSFQDKRN-LYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQ 119

Query: 627 LHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH--------TH------- 671
           L      G IHRD+K  N+LLD     K+SDFGL  TG    H        TH       
Sbjct: 120 L------GFIHRDIKPDNLLLDAKGHVKLSDFGLC-TGLKKAHRTEFYRNLTHNPPSDFS 172

Query: 672 -------------------VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
                              ++ +  G+  Y+ PE F +    +  D +S GV+++E++
Sbjct: 173 FQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML 230

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 51.6 bits (124), Expect = 9e-07
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 25/118 (21%)

Query: 559 EIEMLSKLRHRHLVSLIGFC-----DEQNEMILVYEYM---ANGTLRSHLFGSDLPPLTW 610
           EI++L  L H +++++         +  N++ +VYE M    +  +RS    SD      
Sbjct: 54  EIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSSQTLSD------ 107

Query: 611 KQRLDAC----IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG 664
               D C        RGL Y+H+     ++HRD+K +N+LL+ N   K+ DFGL++T 
Sbjct: 108 ----DHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTT 158

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 51.2 bits (122), Expect = 1e-06
 Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 20/209 (9%)

Query: 514 NFDESLMIGVGGFGKVFKGEIEDC-TLAAIKRANPQSEQGLAE---FETEIEMLSKLRHR 569
           +F+   +IG G FG+V   ++++   + A+K  N       AE   F  E ++L    ++
Sbjct: 2   DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQ 61

Query: 570 HLVSLIGFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWKQRLDACIGAARGLHYL 627
            + +L     ++N + LV +Y   G L + L  F   LP    +  L   + A   +H L
Sbjct: 62  WITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL 121

Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK-GSFGYLDPE 686
           H       +HRD+K  NIL+D N   +++DFG       ME   V ++V  G+  Y+ PE
Sbjct: 122 H------YVHRDIKPDNILMDMNGHIRLADFG--SCLKLMEDGTVQSSVAVGTPDYISPE 173

Query: 687 YFW-----RQQLTEKSDVYSFGVVLFEVV 710
                   + +   + D +S GV ++E++
Sbjct: 174 ILQAMEDGKGKYGPECDWWSLGVCMYEML 202

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 50.8 bits (121), Expect = 2e-06
 Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 33/171 (19%)

Query: 559 EIEMLSKLRHRHLVSLIGF------CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           E+ +L  ++H +++ L+         +  NE+ LV          ++L G+DL  +   Q
Sbjct: 64  ELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLV----------TNLMGADLNNIVKCQ 113

Query: 613 RL-DACIG-----AARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS 666
           +L D  +        RGL Y+H+    GIIHRD+K +N+ ++E+   ++ DFGL++    
Sbjct: 114 KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADD 170

Query: 667 MEHTHVSTAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAV 715
               +V+T       Y  PE    W     +  D++S G ++ E++  +A+
Sbjct: 171 EMTGYVATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLKGKAL 215

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 50.7 bits (121), Expect = 2e-06
 Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)

Query: 538 TLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           TL  ++  + +  +E+ L   + E+ +    RH ++++        + + ++  +MA G+
Sbjct: 26  TLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGS 85

Query: 596 LRSHLFGSDLPPLTWKQRLDACI--GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA 653
             S L      P    + L   I  GA RGL+YLH   + G IHR++K ++IL+  + + 
Sbjct: 86  ANSLL--KTYFPEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLV 140

Query: 654 KMSDFGLS----------KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL---TEKSDVY 700
            +S  GLS          K     +    ST+V     +L PE   RQ L     KSD+Y
Sbjct: 141 SLS--GLSHLYSLVRNGQKAKVVYDFPQFSTSV---LPWLSPELL-RQDLYGYNVKSDIY 194

Query: 701 SFGVVLFEVVCAR 713
           S G+   E+   R
Sbjct: 195 SVGITACELATGR 207

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 50.7 bits (122), Expect = 2e-06
 Identities = 18/42 (42%), Positives = 31/42 (73%), Gaps = 3/42 (7%)

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT 663
           + L Y+H+G    +IHRD+K +NILL+ +   K++DFGL+++
Sbjct: 118 KALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARS 156

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 51.0 bits (122), Expect = 2e-06
 Identities = 59/253 (23%), Positives = 100/253 (39%), Gaps = 64/253 (25%)

Query: 513 NNFDESLMIGVGGFGKV-FKGEIEDCTLAAIK---RANPQSEQGLAEFETEIEMLSKLRH 568
            +F    +IG G FG+V    + +   + A+K   ++    +  LA  + E ++L++   
Sbjct: 1   EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDS 60

Query: 569 RHLVSLIGFCDEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWKQRLDACIGAARG 623
             +VSL     +   + L+ E++  G L + L     F  D+     +  +  C+ A   
Sbjct: 61  PWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVT----RFYMAECVLAIEA 116

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS------------------KTGP 665
           +H L      G IHRD+K  NIL+D     K+SDFGLS                  K+  
Sbjct: 117 VHKL------GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNK 170

Query: 666 SMEHTHVSTAVK---------------------------GSFGYLDPEYFWRQQLTEKSD 698
           +      S AV                            G+  Y+ PE F +Q   ++ D
Sbjct: 171 NRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECD 230

Query: 699 VYSFGVVLFEVVC 711
            +S G ++FE + 
Sbjct: 231 WWSLGAIMFECLI 243

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 50.1 bits (120), Expect = 3e-06
 Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 36/170 (21%)

Query: 521 IGVGGFGKVFKGE---------IEDCTLAAIKRANPQSEQGLAE----FET--EIEMLSK 565
           +G G +GKV K           I+   +  I     +  Q +      F T  E++++++
Sbjct: 17  LGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNE 76

Query: 566 LRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL-TWKQRLD----ACI-- 618
           ++H +++ L+    E + + LV + MA          SDL  +   K RL      CI  
Sbjct: 77  IKHENIMGLVDVYVEGDFINLVMDIMA----------SDLKKVVDRKIRLTESQVKCILL 126

Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSM 667
               GL+ LH   +   +HRD+   NI ++   + K++DFGL+ + G   
Sbjct: 127 QILNGLNVLH---KWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPP 173

Length = 335

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 50.1 bits (120), Expect = 3e-06
 Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 55/243 (22%)

Query: 513 NNFDESLMIGVGGFGKV-FKGEIEDCTLAAIKRANP----QSEQGLAEFETEIEMLSKLR 567
           ++F+   +IG G FG+V    + +   + A+K+       + EQ +A    E ++L++  
Sbjct: 1   DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQ-VAHVRAERDILAEAD 59

Query: 568 HRHLVSLI-GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQR---LDACIGAARG 623
           +  +V L   F DE   + L+ EY+  G + + L   D    T ++    +   I A   
Sbjct: 60  NPWVVKLYYSFQDENY-LYLIMEYLPGGDMMTLLMKKDT--FTEEETRFYIAETILAIDS 116

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL----------------------- 660
           +H L      G IHRD+K  N+LLD     K+SDFGL                       
Sbjct: 117 IHKL------GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSN 170

Query: 661 -----SKTGPSMEHTH--------VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
                SK   S             ++ +  G+  Y+ PE F +    ++ D +S GV+++
Sbjct: 171 FLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMY 230

Query: 708 EVV 710
           E++
Sbjct: 231 EML 233

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 49.3 bits (118), Expect = 5e-06
 Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 27/162 (16%)

Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS--MEHTHVSTAVKGSF 680
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +  M   +V T      
Sbjct: 130 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---- 182

Query: 681 GYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL 740
            Y  PE        E  D++S G ++ E++    V+ P    D I+      +W K    
Sbjct: 183 -YRAPEVILGMGYKENVDIWSVGCIMGEMIRGT-VLFPG--TDHID------QWNK---- 228

Query: 741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
             II+    G  S E + +        +++  K      E L
Sbjct: 229 --IIE--QLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEEL 266

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 48.9 bits (116), Expect = 6e-06
 Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 24/201 (11%)

Query: 521 IGVGGFGKVFKG--EIEDCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           IG G  G V      + D  +A  K + P Q++        E+ ++  + H++++SL+  
Sbjct: 25  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84

Query: 578 ------CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
                  +E  ++ LV E M     +      D   +++      C     G+ +LH+  
Sbjct: 85  FTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA- 138

Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS--MEHTHVSTAVKGSFGYLDPEYFW 689
             GIIHRD+K +NI++  +   K+ DFGL++T  +  M   +V T       Y  PE   
Sbjct: 139 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-----YRAPEVIL 191

Query: 690 RQQLTEKSDVYSFGVVLFEVV 710
                E  D++S G ++ E+V
Sbjct: 192 GMGYKENVDIWSVGCIMGEMV 212

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 48.9 bits (116), Expect = 7e-06
 Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 48/237 (20%)

Query: 514 NFDESLMIGVGGFGKVFKGEIEDC----TLAAIKRANPQSEQGLAEFETEIEMLSKLRHR 569
           +F+   +IG G FG+V   + +D      +  +++A+   ++ +     E ++L +    
Sbjct: 2   DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSL 61

Query: 570 HLVSLI-GFCDEQNEMILVYEYMANGTLRSHLFGSD-LPPLTWKQRLDACIGAARGLHYL 627
            +V +   F D+ N + L+ E++  G + + L   D L     +  +   + A   +H L
Sbjct: 62  WVVKMFYSFQDKLN-LYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL 120

Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH------------------ 669
                 G IHRD+K  N+LLD     K+SDFGL  TG    H                  
Sbjct: 121 ------GFIHRDIKPDNLLLDSKGHVKLSDFGLC-TGLKKAHRTEFYRNLNHSLPSDFTF 173

Query: 670 ----------------THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
                             ++ +  G+  Y+ PE F +    +  D +S GV+++E++
Sbjct: 174 QNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML 230

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 48.7 bits (116), Expect = 8e-06
 Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 55/258 (21%)

Query: 521 IGVGGFGKV-FKGEIEDCTLAAIK---RANPQSEQGLAEFETEIEMLSKLRHRHLVSLI- 575
           IG+G FG+V    +++   L A+K   +A+       A  + E ++L++  +  +V L  
Sbjct: 9   IGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYY 68

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGI 635
            F D+ N +  V +Y+  G + S L    +      +   A +  A  +  +H   + G 
Sbjct: 69  SFQDKDN-LYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCA--IESVH---KMGF 122

Query: 636 IHRDVKTTNILLDENFVAKMSDFGLSKTG------------------PSME--------- 668
           IHRD+K  NIL+D +   K++DFGL  TG                   SME         
Sbjct: 123 IHRDIKPDNILIDRDGHIKLTDFGLC-TGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEID 181

Query: 669 --------------HTHVST-AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
                         H      ++ G+  Y+ PE   R   T+  D +S GV+L+E++  +
Sbjct: 182 RCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQ 241

Query: 714 A-VINPTLPKDQINLADW 730
              +  T  + Q+ + +W
Sbjct: 242 PPFLADTPAETQLKVINW 259

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 48.4 bits (115), Expect = 8e-06
 Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 38/207 (18%)

Query: 521 IGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFET--EIEMLSKLRHRHLVSLIGF 577
           +G G +  V+KG    +  L A+K  + ++E+G+  F    E  +L  L+H ++V L   
Sbjct: 13  LGEGSYATVYKGISRINGQLVALKVISMKTEEGVP-FTAIREASLLKGLKHANIVLLHDI 71

Query: 578 CDEQNEMILVYEYMAN----------GTLRSH---LFGSDLPPLTWKQRLDACIGAARGL 624
              +  +  V+EYM            G L  +   LF   L                RGL
Sbjct: 72  IHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQL---------------LRGL 116

Query: 625 HYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLD 684
            Y+H    + I+HRD+K  N+L+      K++DFGL++       T+ S  V  +  Y  
Sbjct: 117 AYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVV--TLWYRP 171

Query: 685 PEYFW-RQQLTEKSDVYSFGVVLFEVV 710
           P+        +   D++  G +  E++
Sbjct: 172 PDVLLGATDYSSALDIWGAGCIFIEML 198

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 48.2 bits (115), Expect = 1e-05
 Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 38/218 (17%)

Query: 513 NNFDESLMIGVGGFGKVFKGEIEDC-TLAAIKRANPQSEQGLAE---FETEIEMLSKLRH 568
           ++F+   +IG G FG+V   ++++   + A+K  N       AE   F  E ++L     
Sbjct: 1   DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDR 60

Query: 569 RHLVSL-IGFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWKQRLDACIGAARGLH 625
           R + +L   F DE N + LV +Y   G L + L  F   LP    +  L   + A   +H
Sbjct: 61  RWITNLHYAFQDENN-LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVH 119

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG----LSKTGPSMEHTHVST------- 674
            L        +HRD+K  N+LLD+N   +++DFG    L   G    +  V T       
Sbjct: 120 QLG------YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPE 173

Query: 675 ---AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              A++   G   PE  W          +S GV ++E+
Sbjct: 174 ILQAMEDGKGRYGPECDW----------WSLGVCMYEM 201

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 47.5 bits (113), Expect = 1e-05
 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 12/148 (8%)

Query: 570 HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHT 629
           ++V L  +   ++ + LV ++   G L SH+      P    +R  A +  A  L  LH 
Sbjct: 46  NMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVA--LDALH- 102

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFG-LSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
               GI+ RD+   NILLD+    +++ F   S+   S +   V         Y  PE  
Sbjct: 103 --REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENM------YCAPEVG 154

Query: 689 WRQQLTEKSDVYSFGVVLFEVVCARAVI 716
              + TE  D +S G +LFE++  + ++
Sbjct: 155 GISEETEACDWWSLGAILFELLTGKTLV 182

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 47.7 bits (113), Expect = 2e-05
 Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 18/209 (8%)

Query: 513 NNFDESLMIGVGGFGKVFKGEIEDCT-LAAIKRANPQSEQGLAE---FETEIEMLSKLRH 568
           ++F+   +IG G FG+V   +++    + A+K  N       AE   F  E  +L     
Sbjct: 1   DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDC 60

Query: 569 RHLVSLIGFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWKQRLDACIGAARGLHY 626
           + + +L     ++N + LV +Y   G L + L  F   LP    +  +   + A   +H 
Sbjct: 61  QWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQ 120

Query: 627 LHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPE 686
           LH       +HRD+K  N+LLD N   +++DFG S    + + T  S+   G+  Y+ PE
Sbjct: 121 LH------YVHRDIKPDNVLLDMNGHIRLADFG-SCLKMNQDGTVQSSVAVGTPDYISPE 173

Query: 687 YFWRQQ-----LTEKSDVYSFGVVLFEVV 710
                +        + D +S GV ++E++
Sbjct: 174 ILQAMEDGMGKYGPECDWWSLGVCMYEML 202

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 46.5 bits (110), Expect = 2e-05
 Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 27/169 (15%)

Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLF---GSDLPPLT 609
           LA FET   M+ ++ H+H+V L G C    E I+V E++  G L   LF    SD+    
Sbjct: 49  LAFFETA-SMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPL--DLFMHRKSDVLTTP 105

Query: 610 WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN--------FVAKMSDFGLS 661
           WK ++   + +A  L YL    ++ ++H +V T NILL           F+ K+SD G+ 
Sbjct: 106 WKFKVAKQLASA--LSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFI-KLSDPGIP 159

Query: 662 KTGPSMEHTHVSTAVKGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEV 709
            T  S +             ++ PE     + L+  +D +SFG  L+E+
Sbjct: 160 ITVLSRQEC------VERIPWIAPECVEDSKNLSIAADKWSFGTTLWEI 202

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 46.4 bits (110), Expect = 3e-05
 Identities = 63/243 (25%), Positives = 105/243 (43%), Gaps = 40/243 (16%)

Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLP-PLTWK 611
           LA FET   ++S++ H HL  + G C   +E I+V E++ +G L   L       P+ WK
Sbjct: 61  LAFFETA-SLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWK 119

Query: 612 QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA-------KMSDFGLSKTG 664
             +   + +A  L YL    ++ ++H +V   NILL    +A       K+SD G+S T 
Sbjct: 120 ITVAQQLASA--LSYLE---DKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTA 174

Query: 665 PSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
            S E             ++ PE       L+  +D +SFG  L E +C     +  +P  
Sbjct: 175 LSREER------VERIPWIAPECVPGGNSLSTAADKWSFGTTLLE-IC----FDGEVPLK 223

Query: 724 QINLADWAMKWQKQRSLKSIIDPHLKGNYSPE-SLEKFGEIAEKCLDDEGKNRPTMGEVL 782
           +   ++    ++K+  L             PE S ++   +  +CL  E   RP+   +L
Sbjct: 224 ERTPSEKERFYEKKHRL-------------PEPSCKELATLISQCLTYEPTQRPSFRTIL 270

Query: 783 WHL 785
             L
Sbjct: 271 RDL 273

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 47.5 bits (113), Expect = 3e-05
 Identities = 63/304 (20%), Positives = 112/304 (36%), Gaps = 76/304 (25%)

Query: 520 MIGVGGFGKVFKGEIEDCTL-AAIKRANPQSEQGLAEFE-------TEIEMLSKLRHRHL 571
           +IG GG G+V+      C+   A+K+      + L+E          E ++ + L H  +
Sbjct: 9   LIGKGGMGEVYLAYDPVCSRRVALKKI----REDLSENPLLKKRFLREAKIAADLIHPGI 64

Query: 572 VSLIGFCDEQNEMILVYEYMANGTLRSHL--------FGSDLPPLTW-KQRLDACIGAAR 622
           V +   C + + +     Y+   TL+S L           +L   T     L        
Sbjct: 65  VPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICA 124

Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG--LSKTGPSMEHTHVSTAVKGSF 680
            + Y+H+   +G++HRD+K  NILL       + D+G  + K     +   +    +   
Sbjct: 125 TIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNIC 181

Query: 681 --------------GYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD--- 723
                          Y+ PE       +E +D+Y+ GV+L++++       P   K    
Sbjct: 182 YSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLS---FPYRRKKGRK 238

Query: 724 ------------------------QINL----ADWAMKWQKQRSLKSIIDPHLKGNYSPE 755
                                   QI +     D A ++   + LK  ++PHL+G  SPE
Sbjct: 239 ISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG--SPE 296

Query: 756 SLEK 759
              K
Sbjct: 297 WTVK 300

Length = 932

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 45.9 bits (109), Expect = 5e-05
 Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 37/229 (16%)

Query: 521 IGVGGFGKV----FKGEIEDCTLAAIKRANPQSEQGLAEFET-EIEMLSKLR-HRHLVSL 574
           +G G +G V         E+ T+A  K  N  S++ LA+    E+++L   R H+++  L
Sbjct: 8   LGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCL 67

Query: 575 ----IGFCDEQNEMILVYEYMA---NGTLRSHLFGSDLPPLTWKQRLDACIGA-----AR 622
               I F    NE+ L  E M    +  +RS        PLT     DA   +       
Sbjct: 68  YDMDIVFPGNFNELYLYEELMEADLHQIIRSGQ------PLT-----DAHFQSFIYQILC 116

Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK---TGPSMEHTHVSTAVKGS 679
           GL Y+H+     ++HRD+K  N+L++ +   K+ DFGL++     P      ++  V  +
Sbjct: 117 GLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYV-AT 172

Query: 680 FGYLDPEYFWRQQLTEKS-DVYSFGVVLFEVVCARAVINPTLPKDQINL 727
             Y  PE     Q   K+ DV+S G +L E++  + V       DQ+N 
Sbjct: 173 RWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQ 221

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 45.9 bits (109), Expect = 8e-05
 Identities = 62/270 (22%), Positives = 93/270 (34%), Gaps = 96/270 (35%)

Query: 521 IGVGGFGKVFKGEIEDCTLAA-----IKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLI 575
           +G G FG V+K  + +          +K+A    E G      EI M  ++R     S  
Sbjct: 140 LGEGAFGVVYKASLVNKQSKKEGKYVLKKAT---EYG----AVEIWMNERVRRACPNSCA 192

Query: 576 GFC---------DEQNEMILVYEYMANGTL-------------RSHLFGS--DLPPLTWK 611
            F           +++E  LV+ Y    TL               +L G   DLP    +
Sbjct: 193 DFVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLER 252

Query: 612 QR------LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE---------------- 649
           +       +   + A  GLH        GI+HRDVK  NI+  E                
Sbjct: 253 ENKIIQTIMRQILFALDGLH------STGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADL 306

Query: 650 ----NFVAKMSDFGL------------SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL 693
               N++ K  +F L            S   PS     V+TA       L P   W+  L
Sbjct: 307 RVGINYIPK--EFLLDPRYAAPEQYIMSTQTPSAPSAPVATA-------LSP-VLWQLNL 356

Query: 694 TEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
            ++ D+YS G++  ++        P L  D
Sbjct: 357 PDRFDIYSAGLIFLQMAF------PNLRSD 380

Length = 566

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 45.1 bits (106), Expect = 1e-04
 Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 59/244 (24%)

Query: 513 NNFDESLMIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFET-----EIEML 563
           N ++    IG G FG+VF    K   E     AI      S +GL E E      E+ ++
Sbjct: 13  NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAI------SYRGLKEREKSQLVIEVNVM 66

Query: 564 SKLRHRHLVSLIG-FCDEQNE-MILVYEYMANGTLRSH------LFGSDLPPLTWKQRLD 615
            +L+H+++V  I  F ++ N+ + ++ E+   G L  +      +FG     +     +D
Sbjct: 67  RELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGK----IEEHAIVD 122

Query: 616 ACIGAARGLHYLHT-----GAERGIIHRDVKTTNILLDENF-----------------VA 653
                   L Y H        ER ++HRD+K  NI L                     +A
Sbjct: 123 ITRQLLHALAYCHNLKDGPNGER-VLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIA 181

Query: 654 KMSDFGLSKT--GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT--EKSDVYSFGVVLFEV 709
           K+ DFGLSK     SM H+ V T       Y  PE    +  +  +KSD+++ G +++E+
Sbjct: 182 KIGDFGLSKNIGIESMAHSCVGTPY-----YWSPELLLHETKSYDDKSDMWALGCIIYEL 236

Query: 710 VCAR 713
              +
Sbjct: 237 CSGK 240

Length = 1021

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 44.5 bits (105), Expect = 2e-04
 Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 31/204 (15%)

Query: 521 IGVGGFGKVFKGEIEDCT--LAAIKR-ANP-QSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           +G G +G V    I+  T    AIK+ + P QSE        E+ +L  ++H +++ L+ 
Sbjct: 23  VGSGAYGSVCSA-IDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLD 81

Query: 577 F------CDEQNEMILVYEYMAN--GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLH 628
                   DE  +  LV  YM      +  H    D       Q L        GL Y+H
Sbjct: 82  VFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQML-------CGLKYIH 134

Query: 629 TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
           +    GIIHRD+K  N+ ++E+   K+ DFGL++   +    +V T       Y  PE  
Sbjct: 135 SA---GIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVI 186

Query: 689 --WRQQLTEKSDVYSFGVVLFEVV 710
             W     +  D++S G ++ E++
Sbjct: 187 LNW-MHYNQTVDIWSVGCIMAEML 209

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 44.7 bits (105), Expect = 2e-04
 Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 55/223 (24%)

Query: 524 GGFGKVFKGEIEDCTLAAIKR--------ANPQSEQGLAEF-----------ETEIEMLS 564
           G FGK+F   +   T  A  R          P+ E+ +A+            E EI  L 
Sbjct: 159 GAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALG 218

Query: 565 KLRHRHLVSLIGFCDEQNEMILVYE---YMANGT----LRSHLFGSDLP----PLTWKQR 613
           +L H +++ +        E IL  E   YM        L S ++         PL  + R
Sbjct: 219 RLNHENILKI--------EEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTR 270

Query: 614 --LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG----LSKTGPSM 667
             +   + A   + Y+H   ++ +IHRD+K  NI L+ +    + DFG      K   + 
Sbjct: 271 AIMKQLLCA---VEYIH---DKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAF 324

Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           ++  V T    S     PE        E +D++S G++L +++
Sbjct: 325 DYGWVGTVATNS-----PEILAGDGYCEITDIWSCGLILLDML 362

Length = 501

>gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional

 Score = 44.0 bits (104), Expect = 3e-04
 Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 26/180 (14%)

Query: 27  INCGTNSS---VNVDGRKWVGDLASNNNVTL-SSSGIAATTD------SLSGDSIYEPLY 76
           ++CG   S    +  G  W GD   N   T  S S  A +T+      S + +   E LY
Sbjct: 196 LSCGAGKSKFDEDYSGDHWGGDRFWNRMQTFGSGSDQAISTENVIKKASNAPNFYPESLY 255

Query: 77  KTARVFAD---GLNYTFEIIAG-NYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFS 132
           ++A V  D    L+YT ++    NY V LHF           K  F V+ NG     +  
Sbjct: 256 QSALVSTDTQPDLSYTMDVDPNRNYSVWLHFAEIDNSITAEGKRVFDVLINGDTAFKDVD 315

Query: 133 APGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVPVV 192
                      ++ SG   +++ L K   + V    L I   P KG+   INAIE+  ++
Sbjct: 316 I----------VKMSGERYTALVLNKT--VAVSGRTLTIVLQPKKGTHAIINAIEVFEII 363

Length = 623

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 43.4 bits (102), Expect = 4e-04
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG 681
           R + YLH   E  IIHRD+K  NI ++      + DFG +   P   + +      G+  
Sbjct: 193 RAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFG-AACFPVDINANKYYGWAGTIA 248

Query: 682 YLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              PE   R       D++S G+VLFE+
Sbjct: 249 TNAPELLARDPYGPAVDIWSAGIVLFEM 276

Length = 391

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 42.8 bits (101), Expect = 5e-04
 Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 28/170 (16%)

Query: 559 EIEMLSKLRHRHLVSLIGFC-----DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQR 613
           EI++L  LRH  +V +          E  ++ +V+E M +   +      DL P   +  
Sbjct: 49  EIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFF 108

Query: 614 LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK-----TGPSME 668
           L   +   R L Y+HT     + HRD+K  NIL + +   K+ DFGL++     T  ++ 
Sbjct: 109 LYQLL---RALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 162

Query: 669 HT-HVSTAVKGSFGYLDPE----YFWRQQLTEKSDVYSFGVVLFEVVCAR 713
            T +V+T       Y  PE    +F +   T   D++S G +  EV+  +
Sbjct: 163 WTDYVATR-----WYRAPELCGSFFSK--YTPAIDIWSIGCIFAEVLTGK 205

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 43.0 bits (101), Expect = 6e-04
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 626 YLHTGAERGIIHRDVKTTNILLD--ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           Y+H     GIIHRD+KT N+L++  E+    + DFG +        T     + G+    
Sbjct: 275 YIHG---EGIIHRDIKTENVLVNGPEDIC--LGDFGAACFARGSWSTPFHYGIAGTVDTN 329

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFE 708
            PE       T   D++S G+V+FE
Sbjct: 330 APEVLAGDPYTPSVDIWSAGLVIFE 354

Length = 461

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	851
PLN03150	623	hypothetical protein; Provisional	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
PF12819	347	Malectin_like: Carbohydrate-binding protein of the	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.98
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.98
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.98
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.98
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.98
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.98
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.98
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.98
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.98
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.98
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.97
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.97
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.97
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.97
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.97
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.97
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.97
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.97
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.97
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.97
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.97
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.97
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.97
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.96
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.96
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.96
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.96
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.96
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.96
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.96
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.95
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.95
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.95
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.94
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.94
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.93
KOG1152	772	consensus Signal transduction serine/threonine kin	99.93
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.92
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.92
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.92
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.92
PLN00181	793	protein SPA1-RELATED; Provisional	99.91
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.9
PRK09188	365	serine/threonine protein kinase; Provisional	99.87
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.86
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.85
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.84
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.79
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.79
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.79
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.78
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.78
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.78
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.76
PRK12274	218	serine/threonine protein kinase; Provisional	99.75
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.75
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.74
PF11721	174	Malectin: Di-glucose binding within endoplasmic re	99.73
PRK10345	210	hypothetical protein; Provisional	99.72
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.72
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.71
PRK14879	211	serine/threonine protein kinase; Provisional	99.66
smart00090	237	RIO RIO-like kinase.	99.65
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.64
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.64
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.64
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.64
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.63
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.57
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.51
PF11721	174	Malectin: Di-glucose binding within endoplasmic re	99.51
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.47
PLN03150	623	hypothetical protein; Provisional	99.47
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.46
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.37
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.36
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.19
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.18
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.15
KOG1243	690	consensus Protein kinase [General function predict	99.09
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.07
PF12819	347	Malectin_like: Carbohydrate-binding protein of the	98.98
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.95
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.93
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.85
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.85
KOG3087	229	consensus Serine/threonine protein kinase [General	98.81
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.78
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.65
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.61
COG4248	637	Uncharacterized protein with protein kinase and he	98.55
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.41
PRK09902	216	hypothetical protein; Provisional	98.39
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.35
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.28
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.2
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.19
PF01636	239	APH: Phosphotransferase enzyme family This family	98.03
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.03
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.98
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.96
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.89
PLN02876	822	acyl-CoA dehydrogenase	97.81
KOG3593	355	consensus Predicted receptor-like serine/threonine	97.81
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.75
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.71
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.62
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.59
PRK10593	297	hypothetical protein; Provisional	97.43
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.33
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.3
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.28
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.27
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.27
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.21
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.13
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	96.79
PRK05231	319	homoserine kinase; Provisional	96.67
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.5
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	96.46
KOG2268	465	consensus Serine/threonine protein kinase [Signal	96.34
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	96.19
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	96.1
PLN02236	344	choline kinase	96.03
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	95.57
KOG2270	520	consensus Serine/threonine protein kinase involved	94.86
PLN02756	418	S-methyl-5-thioribose kinase	94.82
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	94.56
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	94.53
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	94.47
COG2334	331	Putative homoserine kinase type II (protein kinase	94.47
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	94.22
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	94.19
KOG1093	725	consensus Predicted protein kinase (contains TBC a	94.15
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	94.11

>PLN03150 hypothetical protein; Provisional

Probab=100.00  E-value=2.3e-55  Score=518.98  Aligned_cols=327  Identities=26%  Similarity=0.339  Sum_probs=256.3

Q ss_pred             CCCceEEecCCCCccc--cCCcceeccCCCCCccccccCCcccccCCCCCCCCCcccccceeeecc----CceeeEee-c
Q 047215           21 QSKSFLINCGTNSSVN--VDGRKWVGDLASNNNVTLSSSGIAATTDSLSGDSIYEPLYKTARVFAD----GLNYTFEI-I   93 (851)
Q Consensus        21 ~~~~~~i~cG~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~R~f~~----~~~y~~~~-~   93 (851)
                      ++++|+||||++.+++  .+||+|++|..      ++++..... .   .+...+++|+|||+|+.    ++||.||+ +
T Consensus        22 ~~~~~~I~CGs~~~~~~d~~~~~w~~D~~------~~~~~~~~~-~---~~~~~~~~~~t~R~F~~~~g~~~cY~~~~~~   91 (623)
T PLN03150         22 EPFTMRISCGARVNVRTAPTNTLWYKDFA------YTGGIPANA-T---RPSFIAPPLKTLRYFPLSDGPENCYNINRVP   91 (623)
T ss_pred             CCccEEEeCCCCCCcccCCCCCEEcCCcc------cccCccccc-c---CcccccchhhccccCCcccccccceEeeecC
Confidence            7889999999987643  78999999921      222111111 1   22345678999999986    78999997 5


Q ss_pred             cceEEEEEEeccCCCCCcccccceEEEEEcc---eEEeecCCCCccccccccccccCCCCCcccceEEEEEeeccCCeEE
Q 047215           94 AGNYIVRLHFCPFPFEDYNVNKSSFGVVANG---LKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDKLM  170 (851)
Q Consensus        94 ~g~~~~R~~f~~~~~~~~~~~~~~f~v~~~g---~~~l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  170 (851)
                      +|+|+||+||+|++|+++| +.+.|||+++|   ++++.+|+..                  ..++++|+++.++++.+.
T Consensus        92 ~g~ylVRl~F~~~~y~~~~-~~~~Fdv~~~~~~~~tv~~~~~~~------------------~~~v~~E~i~~~~~~~l~  152 (623)
T PLN03150         92 KGHYSVRVFFGLVAEPNFD-SEPLFDVSVEGTQISSLKSGWSSH------------------DEQVFAEALVFLTDGSAS  152 (623)
T ss_pred             CCcEEEEEEeecCCcCCCC-CCCceEEEECcEEEEEEecCcccC------------------CCcEEEEEEEEecCCcEE
Confidence            7999999999999999999 67899999999   7788888742                  347899999999999999


Q ss_pred             EEEecCCCcceeeeeeEEEeccccccccccccccCcccCCCcccceeEEEEEEecCCCCCcC---CCCccc--ccccccC
Q 047215          171 IEFIPSKGSFGFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPEIKP---SRDPDL--WRMWEAD  245 (851)
Q Consensus       171 i~f~~~~~~~~fi~~iEl~~~~~~~y~~~~~~~~~~~~~~~~~~~~l~~~~Rin~Gg~~~~~---~~d~~~--~r~W~~d  245 (851)
                      |||+|+++++||||+|||||+|+.+|..... .        .-+++|+++||+||||.++++   +.||.+  ||+|.+|
T Consensus       153 vcf~~~~~~~pFIs~iEv~~l~~~~y~~~~~-~--------~~~~~L~~~~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d  223 (623)
T PLN03150        153 ICFHSTGHGDPAILSIEILQVDDKAYNFGPS-W--------GQGVILRTAKRLSCGAGKSKFDEDYSGDHWGGDRFWNRM  223 (623)
T ss_pred             EEEecCCCCCCceeEEEEEEcCccccccccc-c--------cCceEEEEEEEEEecCcccccccCCCCCcccCccccCcC
Confidence            9999999999999999999999999963310 0        116789999999999987543   223344  8999999


Q ss_pred             CCcccccCCCcccccCcceEeccCCCccccchhhHHHhhccCCCcccccccceeeeeecCCCCceEEEEEeeeEEE--ec
Q 047215          246 SSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVY--EK  323 (851)
Q Consensus       246 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~P~~vy~tA~~~~~~~~~~~~~~lt~~~~vd~~~~Y~v~LhF~Ei~~--~~  323 (851)
                      .+|..+.  ...+.....+.+. +...+.+|+.||||||++...     ..+++|.|++++++.|+|||||||++.  ..
T Consensus       224 ~~~~~~~--~~~~st~~~I~~~-~~~~~~~P~~VyqTA~~~~~~-----~~~lty~~~v~~~~~Y~VrLhFaEi~~~~~~  295 (623)
T PLN03150        224 QTFGSGS--DQAISTENVIKKA-SNAPNFYPESLYQSALVSTDT-----QPDLSYTMDVDPNRNYSVWLHFAEIDNSITA  295 (623)
T ss_pred             cccCCCc--ccccccccccccc-cCCCccChHHHhhhhccccCC-----CCceEEEeecCCCCCEEEEEEEEeccCccCC
Confidence            8875322  1122223344443 345678899999999997652     247999999999999999999999963  35


Q ss_pred             CCeEEEEEEEcCccccCCcchhhhcCCCCceeEEEeEecccccceeeeEEeCCccCCCCCCchhhccccccccccCC
Q 047215          324 ANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFSQN  400 (851)
Q Consensus       324 ~~~R~FdI~in~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~~~~~~~~lng~Ei~~~~~~  400 (851)
                      .++|+|||||||+.+.+++||..++++...++|.++......+.+.  +++++..+     .+|+|||+||+++...
T Consensus       296 ~~~R~F~V~ing~~~~~~~di~~~~g~~~~~~~~~~~v~~~~g~l~--isl~p~~~-----s~pilNaiEI~~~~~~  365 (623)
T PLN03150        296 EGKRVFDVLINGDTAFKDVDIVKMSGERYTALVLNKTVAVSGRTLT--IVLQPKKG-----THAIINAIEVFEIITA  365 (623)
T ss_pred             CceEEEEEEECCEEeecccChhhhcCCcccceEEEeEEeecCCeEE--EEEeeCCC-----Ccceeeeeeeeecccc
Confidence            6899999999999999999999988877789999987444445455  99998765     3689999999999863

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.7e-55  Score=480.08  Aligned_cols=290  Identities=51%  Similarity=0.875  Sum_probs=259.3

Q ss_pred             CCcccCHHHHHHHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEE
Q 047215          499 AGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC  578 (851)
Q Consensus       499 ~~~~~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~  578 (851)
                      ..+.|++.+++.||++|...++||+|+||.||+|.++++..+|||++.....+...+|.+|+.++.+++|||+|+|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            45789999999999999999999999999999999999999999988776544245699999999999999999999999


Q ss_pred             ccCC-cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEee
Q 047215          579 DEQN-EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD  657 (851)
Q Consensus       579 ~~~~-~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~D  657 (851)
                      .+++ +.+||||||++|+|.++|+.....+++|.+|++||.++|+||+|||+.+.++|||||||++|||||+++++||+|
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD  220 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD  220 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence            9988 599999999999999999886644899999999999999999999998888999999999999999999999999


Q ss_pred             ccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh
Q 047215          658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ  737 (851)
Q Consensus       658 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~  737 (851)
                      ||+|+..+.. .........||.+|+|||++..+..+.|+|||||||+|+||+||+.+.+...+.....+.+|++.....
T Consensus       221 FGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~  299 (361)
T KOG1187|consen  221 FGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE  299 (361)
T ss_pred             ccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence            9999875542 222222117999999999999999999999999999999999999988877666777899999999888


Q ss_pred             cccccccCccCC-CCCCh-hHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          738 RSLKSIIDPHLK-GNYSP-ESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       738 ~~~~~i~d~~l~-~~~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                      +.+.+++||.+. +.++. ++...+..++.+|++.+|.+||+|.||++.|+.+.
T Consensus       300 ~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~  353 (361)
T KOG1187|consen  300 GKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL  353 (361)
T ss_pred             cchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence            899999999997 66665 68888999999999999999999999999985443

>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan []

Probab=100.00  E-value=2.7e-54  Score=474.21  Aligned_cols=323  Identities=38%  Similarity=0.587  Sum_probs=235.5

Q ss_pred             EecCCCCccc--cC---CcceeccCCCCCccccccC-CcccccCCCCCCCCCcccccceeeec--cCceeeEeec-c--c
Q 047215           27 INCGTNSSVN--VD---GRKWVGDLASNNNVTLSSS-GIAATTDSLSGDSIYEPLYKTARVFA--DGLNYTFEII-A--G   95 (851)
Q Consensus        27 i~cG~~~~~~--~~---~~~~~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~t~R~f~--~~~~y~~~~~-~--g   95 (851)
                      ||||++.+..  .|   ||+|++|.  .+..  .+. +.++. ......+...++|+|||+|+  .++||+||+. +  +
T Consensus         1 IdCG~~~~~s~y~D~~tg~~~~~D~--~~~~--~g~~~~i~~-~~~~~~~~~~~~y~taR~F~~g~r~cY~l~~~~~~~~   75 (347)
T PF12819_consen    1 IDCGSSSNSSSYVDDSTGRTWVSDD--DFID--TGKSGNISS-QPDSSSSDSSPPYQTARIFPEGSRNCYTLPVTPPGGG   75 (347)
T ss_pred             CcCCCCCCCcccccCCCCcEEeCCC--Cccc--CCCcccccc-ccCCcCCccccccceEEEcCCCCccEEEeeccCCCCc
Confidence            8999886633  44   99999994  2221  111 11110 11123456678999999998  6799999985 3  3


Q ss_pred             eEEEEEEeccCCCCCcc--c--ccceEEEEEcceEEeecCCCCccccccccccccCCCCCcccceEEEEEeecc-CCeEE
Q 047215           96 NYIVRLHFCPFPFEDYN--V--NKSSFGVVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVD-LDKLM  170 (851)
Q Consensus        96 ~~~~R~~f~~~~~~~~~--~--~~~~f~v~~~g~~~l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~  170 (851)
                      +|+||+||+|++|++.+  +  +++.|++++|+.             +|.++...   ++...++++|+++.+. ++.|.
T Consensus        76 ~yliRl~F~~gnyd~~~fs~~~~~~~FdL~~~~n-------------~~~tV~~~---~~~~~~~~~E~ii~v~~~~~l~  139 (347)
T PF12819_consen   76 KYLIRLHFYYGNYDGLNFSVSSSPPTFDLLLGFN-------------FWSTVNLS---NSPSSPVVKEFIINVTWSDTLS  139 (347)
T ss_pred             eEEEEEEeccccccccccccccCCcceEEEECCc-------------eeEEEEec---CCCcceEEEEEEEEEcCCCcEE
Confidence            88999999999999743  1  356788877762             23333221   1123579999999998 57999


Q ss_pred             EEEecCCCcc-eeeeeeEEEeccccccccccccccCcccCCCcccceeEEEEEEecCCCC--CcCCCCcccccccccC--
Q 047215          171 IEFIPSKGSF-GFINAIEIVPVVDKLFADTINKVGGNDVNFNLSGRGVETMYRLNVGGPE--IKPSRDPDLWRMWEAD--  245 (851)
Q Consensus       171 i~f~~~~~~~-~fi~~iEl~~~~~~~y~~~~~~~~~~~~~~~~~~~~l~~~~Rin~Gg~~--~~~~~d~~~~r~W~~d--  245 (851)
                      |||+|++.+. ||||+|||||||+++|+..          ....+.||+++||+||||..  ++++ +|.+||.|.+.  
T Consensus       140 vclv~~~~g~~pFIsaiEl~~lp~~ly~~~----------~~~~s~~L~~~~R~n~G~~~~~iryp-~D~~dR~W~~~~~  208 (347)
T PF12819_consen  140 VCLVPTGSGTFPFISAIELRPLPDSLYPDT----------DANSSQALETVYRLNVGGSSSFIRYP-DDTYDRIWQPYSS  208 (347)
T ss_pred             EEEEeCCCCCCCceeEEEEEECCccceecc----------ccCCCceeEEEEeecCCCcccccCCC-CCcceeecccccc
Confidence            9999999655 9999999999999999643          23557899999999999998  8877 66799999953  


Q ss_pred             CCcccccCCCcccccCcceEeccCCCccccchhhHHHhhccCCCcccccccceeeeeecCCCCceEEEEEeeeEEE--ec
Q 047215          246 SSYMITANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVY--EK  323 (851)
Q Consensus       246 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~P~~vy~tA~~~~~~~~~~~~~~lt~~~~vd~~~~Y~v~LhF~Ei~~--~~  323 (851)
                      .+.|...++.      ..+......+.+.||..||+||+++.+..   ..++|+|.+ ++++..|+|+||||||+.  ..
T Consensus       209 ~~~~~~ist~------~~i~~~~~~~~~~~P~~V~~TA~~~~~~s---~~~nltw~~-~~~~~~y~v~lHFaEi~~~~~~  278 (347)
T PF12819_consen  209 SPGWSNISTT------SNININSSNNPYDAPSAVYQTARTPSNSS---DPLNLTWSF-VDPGFSYYVRLHFAEIQSLSPN  278 (347)
T ss_pred             Cccccccccc------eeeecccCCccCcChHHHHHhhhcccccc---cceEEEecc-CCCCccEEEEEEEeecccccCC
Confidence            2223322221      12222234457789999999999986643   348999999 899999999999999976  35


Q ss_pred             CCeEEEEEEEcCccccCCcchhhhcCCCCceeEEEeEecc-cccceeeeEEeCCccCCCCCCchhhccccccccc
Q 047215          324 ANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAV-SSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKF  397 (851)
Q Consensus       324 ~~~R~FdI~in~~~~~~~~di~~~~~~~~~~~~~~~~~~~-~~~~~~l~~s~~~~~~~~~~~~~~~lng~Ei~~~  397 (851)
                      .++|+|||||||+.+.+++... ..+....++|.+++... ..+.+  ++++++...+.   .+|||||+|||++
T Consensus       279 ~~~R~F~IyiN~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~--~isL~~t~~S~---lppiLNalEIy~v  347 (347)
T PF12819_consen  279 NNQREFDIYINGQTAYSDVSPP-YLGADTVPYYSDYVVNVPDSGFL--NISLGPTPDST---LPPILNALEIYKV  347 (347)
T ss_pred             CCeEEEEEEECCeEccCccCcc-cccCcceEeecceEEEecCCCEE--EEEEEeCCCCC---cCceeEeeeeEeC
Confidence            5689999999999999744432 24445578899998433 33444  49999988874   6999999999985

This entry represents a malectin-like domain found in a number of plant receptor kinases.

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=9.7e-46  Score=405.28  Aligned_cols=253  Identities=33%  Similarity=0.565  Sum_probs=214.9

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCCh--hhHHHHHHHHHHHHhcCCcceeeEEEEEccCC-cEEEEEEecCCc
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSE--QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN-EMILVYEYMANG  594 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~-~~~lV~Ey~~~g  594 (851)
                      .+.||+|+||+||+|.+.+...||||++.....  ...+.|.+|+.+|++++|||||+++|+|.+.. .++||||||++|
T Consensus        46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G  125 (362)
T KOG0192|consen   46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG  125 (362)
T ss_pred             hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence            445999999999999999887799999887532  22569999999999999999999999999887 799999999999


Q ss_pred             chhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCC-eEEcCCCCCCeEEcCCC-eEEEeeccccccCCCCCcccc
Q 047215          595 TLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG-IIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       595 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~-iiHrDlk~~NILld~~~-~~kl~DFGla~~~~~~~~~~~  672 (851)
                      +|.++|+......+++..+++++.|||+||.|||+   .+ |||||||++||||+.++ .+||+|||+++......  ..
T Consensus       126 sL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~  200 (362)
T KOG0192|consen  126 SLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--TS  200 (362)
T ss_pred             cHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeecccc--cc
Confidence            99999987656789999999999999999999996   55 99999999999999997 99999999998643211  22


Q ss_pred             ccccccCCcccCccccc--ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          673 STAVKGSFGYLDPEYFW--RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~--~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      .+...||+.|||||++.  ...|+.|+|||||||+||||+||+.||....+ .+.  ..            .+.....+.
T Consensus       201 ~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~--~~------------~v~~~~~Rp  265 (362)
T KOG0192|consen  201 MTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQV--AS------------AVVVGGLRP  265 (362)
T ss_pred             ccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHH--HH------------HHHhcCCCC
Confidence            34478999999999999  66999999999999999999999999987654 211  11            111223344


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      .++..++..+..++.+||+.||.+||++.+++..|+.+..
T Consensus       266 ~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~  305 (362)
T KOG0192|consen  266 PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS  305 (362)
T ss_pred             CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence            5556688889999999999999999999999999998865

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-45  Score=384.94  Aligned_cols=255  Identities=26%  Similarity=0.388  Sum_probs=212.3

Q ss_pred             ccCHHHHHHHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEc
Q 047215          502 RFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCD  579 (851)
Q Consensus       502 ~~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~  579 (851)
                      .+++.+++.       .+.||+|..|+|||++++ .++.+|+|.+... .+...+++.+|++++++.+||+||.++|.|.
T Consensus        75 ~i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~  147 (364)
T KOG0581|consen   75 GISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY  147 (364)
T ss_pred             ccCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence            455666554       568999999999999986 4677899998543 5556688999999999999999999999998


Q ss_pred             cCC-cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeec
Q 047215          580 EQN-EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF  658 (851)
Q Consensus       580 ~~~-~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DF  658 (851)
                      .+. +..|+||||++|+|.+++...  +.+++..+-+|+.++++||.|||.  +++||||||||+|||++..|++|||||
T Consensus       148 ~~~~~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDF  223 (364)
T KOG0581|consen  148 SNGEEISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDF  223 (364)
T ss_pred             eCCceEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccc
Confidence            888 599999999999999998544  568999999999999999999996  599999999999999999999999999


Q ss_pred             cccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCC--cchhcHHHHHHHHhh
Q 047215          659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP--KDQINLADWAMKWQK  736 (851)
Q Consensus       659 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~--~~~~~l~~~~~~~~~  736 (851)
                      |.++...+.    ...+..||..|||||.+++..|+.++||||||+.++|+.+|+.|+.+..+  ....++.        
T Consensus       224 GVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll--------  291 (364)
T KOG0581|consen  224 GVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELL--------  291 (364)
T ss_pred             cccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHH--------
Confidence            999864332    45667899999999999999999999999999999999999999877511  1112221        


Q ss_pred             hcccccccCccCCCCCCh-hHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          737 QRSLKSIIDPHLKGNYSP-ESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       737 ~~~~~~i~d~~l~~~~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                          ..|++..- +..+. .++++++.++..||++||.+||++.|+++|
T Consensus       292 ----~~Iv~~pp-P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  292 ----CAIVDEPP-PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             ----HHHhcCCC-CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                22333111 12233 367779999999999999999999999999

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-44  Score=394.57  Aligned_cols=251  Identities=30%  Similarity=0.450  Sum_probs=214.1

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcchh
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR  597 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~  597 (851)
                      .+.||+|-||.||.|.+++...||+|.++... ...++|.+|+++|++|+|+|||+++|+|..+..++||||||+.|+|.
T Consensus       211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl  289 (468)
T KOG0197|consen  211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLL  289 (468)
T ss_pred             HHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHH
Confidence            55799999999999999999899999988753 33578899999999999999999999999988999999999999999


Q ss_pred             hhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccc
Q 047215          598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK  677 (851)
Q Consensus       598 ~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~  677 (851)
                      ++|+......+...+.+.++.|||+||+||++   +++|||||.++||||+++..+||+||||||...+ +....+....
T Consensus       290 ~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d-~~Y~~~~~~k  365 (468)
T KOG0197|consen  290 DYLRTREGGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGD-DEYTASEGGK  365 (468)
T ss_pred             HHhhhcCCCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCC-CceeecCCCC
Confidence            99988667789999999999999999999995   9999999999999999999999999999994332 3333445555


Q ss_pred             cCCcccCcccccccCCCchHHHHHHHHHHHHHHhC-CcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhH
Q 047215          678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA-RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPES  756 (851)
Q Consensus       678 gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  756 (851)
                      -+..|.|||.+....++.|||||||||+||||+|- +.|+....      ..+.          .+.++...+-..|+.|
T Consensus       366 fPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms------n~ev----------~~~le~GyRlp~P~~C  429 (468)
T KOG0197|consen  366 FPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS------NEEV----------LELLERGYRLPRPEGC  429 (468)
T ss_pred             CCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC------HHHH----------HHHHhccCcCCCCCCC
Confidence            67899999999999999999999999999999995 44443322      2221          1223444555667889


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          757 LEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       757 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                      +..+.+++..||+.+|++|||++.+...|+.+.
T Consensus       430 P~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~  462 (468)
T KOG0197|consen  430 PDEVYELMKSCWHEDPEDRPTFETLREVLEDFF  462 (468)
T ss_pred             CHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence            999999999999999999999998888877654

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=2.5e-44  Score=409.68  Aligned_cols=260  Identities=30%  Similarity=0.486  Sum_probs=220.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCCChh-hHHHHHHHHHHHHhcCCcceeeEEEEEccCCcE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQSEQ-GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~  584 (851)
                      +.+....+.||+|.||+||+|+..      +.+.||||.++..... ...+|++|+++|..|+|||||+|+|+|.+++.+
T Consensus       485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~  564 (774)
T KOG1026|consen  485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL  564 (774)
T ss_pred             hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence            345556778999999999999853      3467999999887554 788999999999999999999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCC------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe
Q 047215          585 ILVYEYMANGTLRSHLFGSD------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV  652 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~  652 (851)
                      +||+|||.+|||.++|....            .++|+..+.+.||.|||.||.||-+   +.+|||||..+|+||.++..
T Consensus       565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~l~  641 (774)
T KOG1026|consen  565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGENLV  641 (774)
T ss_pred             EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CcccccchhhhhceeccceE
Confidence            99999999999999995321            3448999999999999999999985   89999999999999999999


Q ss_pred             EEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHH
Q 047215          653 AKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWA  731 (851)
Q Consensus       653 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~  731 (851)
                      |||+||||+|.....+..+....-.-+.+|||||.|..+++|.+||||||||+|||+++ |+.|+......+       +
T Consensus       642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E-------V  714 (774)
T KOG1026|consen  642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE-------V  714 (774)
T ss_pred             EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH-------H
Confidence            99999999998777666555544456789999999999999999999999999999998 777776654433       2


Q ss_pred             HHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          732 MKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       732 ~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ..+.+.+.        + -+.+..|+..+..||..||+.+|.+||+++||-..|+...+
T Consensus       715 Ie~i~~g~--------l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~  764 (774)
T KOG1026|consen  715 IECIRAGQ--------L-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ  764 (774)
T ss_pred             HHHHHcCC--------c-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence            22333332        2 24578899999999999999999999999999998874433

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.1e-43  Score=390.29  Aligned_cols=248  Identities=25%  Similarity=0.402  Sum_probs=212.7

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ..|...+.||+|||+.||+++. +.|..+|+|++.+.   ...+.+...+||++.++|+|||||+++++|++.+..|||.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            4577788999999999999997 88999999998763   4455678899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      |+|++|+|..+++  .++++++.++..+..||+.||.|||+   ++|||||||..|++|+++.++||+|||||...... 
T Consensus        98 ELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~-  171 (592)
T KOG0575|consen   98 ELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD-  171 (592)
T ss_pred             EecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeecCc-
Confidence            9999999999985  55789999999999999999999995   89999999999999999999999999999875432 


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                       .....+.||||.|+|||++.....+..+||||+|||||.||+|++||....-.+      -...         |.... 
T Consensus       172 -~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke------ty~~---------Ik~~~-  234 (592)
T KOG0575|consen  172 -GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE------TYNK---------IKLNE-  234 (592)
T ss_pred             -ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH------HHHH---------HHhcC-
Confidence             234567899999999999999999999999999999999999999997542111      1111         11111 


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       -.+|...+...++|+.++|+.||.+|||+++||.|
T Consensus       235 -Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  235 -YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             -cccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence             12334555668999999999999999999999999

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3e-44  Score=376.23  Aligned_cols=260  Identities=26%  Similarity=0.390  Sum_probs=209.3

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCCh-------hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSE-------QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~-------~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~  584 (851)
                      +.|.+.+.||+|+||.|-+|.- +.|+.+|||++....-       .......+|+++|++|+|||||+++++++..+..
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~  251 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS  251 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence            5577788999999999999974 5789999999875411       1123357999999999999999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCC---CeEEEeecccc
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN---FVAKMSDFGLS  661 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~---~~~kl~DFGla  661 (851)
                      |||||||++|+|.+.+-.+.  .+.+.....++.|++.|+.|||+   +||+||||||+|||+..+   ..+||+|||+|
T Consensus       252 YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDFGlA  326 (475)
T KOG0615|consen  252 YMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDFGLA  326 (475)
T ss_pred             EEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEecccchh
Confidence            99999999999999985544  46677778899999999999995   999999999999999655   78999999999


Q ss_pred             ccCCCCCccccccccccCCcccCcccccccC---CCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhc
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR  738 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~  738 (851)
                      +...   ......+.|||+.|.|||++....   +..++|+||+||+||-++||.+||.......  ++.+...    .+
T Consensus       327 K~~g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--sl~eQI~----~G  397 (475)
T KOG0615|consen  327 KVSG---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--SLKEQIL----KG  397 (475)
T ss_pred             hccc---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--cHHHHHh----cC
Confidence            9743   445567899999999999998654   3348899999999999999999997654322  1211110    01


Q ss_pred             ccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCCC
Q 047215          739 SLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDR  801 (851)
Q Consensus       739 ~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~~  801 (851)
                        ...+-|    ....+..++..+|+.+||..||++|||+.|+|+|         +|+++...
T Consensus       398 --~y~f~p----~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h---------pW~~~~~~  445 (475)
T KOG0615|consen  398 --RYAFGP----LQWDRISEEALDLINWMLVVDPENRPSADEALNH---------PWFKDAPC  445 (475)
T ss_pred             --cccccC----hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC---------hhhhcccc
Confidence              111111    2234667889999999999999999999999999         99986543

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=8.8e-43  Score=366.19  Aligned_cols=250  Identities=27%  Similarity=0.413  Sum_probs=207.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .+|...+.||+|+||+||+|++. ++..||||.+...  ..+..+.+..|+++|+.++|||||+|+++++.++..|||||
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME   89 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME   89 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence            56777788999999999999974 5688999998876  67777889999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCC------CeEEEeecccccc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN------FVAKMSDFGLSKT  663 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~------~~~kl~DFGla~~  663 (851)
                      ||.+|+|.++|+...  .+++.....++.|+|.||++||   +++||||||||.||||+..      -.+||+|||+||.
T Consensus        90 yC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~  164 (429)
T KOG0595|consen   90 YCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF  164 (429)
T ss_pred             eCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence            999999999996654  6899999999999999999999   4999999999999999754      5689999999998


Q ss_pred             CCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      ..   ......+.||++-|||||+++.++|+.|+|+||+|++|||+++|+.||....+.+-      ........     
T Consensus       165 L~---~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL------~~~~~k~~-----  230 (429)
T KOG0595|consen  165 LQ---PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKEL------LLYIKKGN-----  230 (429)
T ss_pred             CC---chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHH------HHHHhccc-----
Confidence            55   33445778999999999999999999999999999999999999999986554332      11111111     


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                         .+....+......+.+++...++.+|.+|.+..+-+.|
T Consensus       231 ---~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~  268 (429)
T KOG0595|consen  231 ---EIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDH  268 (429)
T ss_pred             ---cccCchhhhccCchhhhhhHHHhcCccccCchHHhhhh
Confidence               11111223333445678888888999999888877766

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=9.9e-41  Score=361.01  Aligned_cols=265  Identities=27%  Similarity=0.457  Sum_probs=219.8

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCCh-hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSE-QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      +.....+.++||+|-||+|..+..++...||||+++.... ...++|.+||++|.+|+|||||+|+|+|..++.++||+|
T Consensus       536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E  615 (807)
T KOG1094|consen  536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE  615 (807)
T ss_pred             chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence            4455667789999999999999999999999999998754 445899999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      ||++|+|.++|..+..+.+.-...++||.|||.||+||.+   .++|||||.++|||+|.++++||+|||++|.....+.
T Consensus       616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y  692 (807)
T KOG1094|consen  616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY  692 (807)
T ss_pred             HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccccccCCc
Confidence            9999999999987765556677888999999999999996   8999999999999999999999999999998776666


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHH--hCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV--CARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLl--tG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                      .+......-+.+|||||.+..++++.++|||+||++|||++  |...|+.....+   ..++-...+...+..      .
T Consensus       693 y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e---~vven~~~~~~~~~~------~  763 (807)
T KOG1094|consen  693 YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE---QVVENAGEFFRDQGR------Q  763 (807)
T ss_pred             eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH---HHHHhhhhhcCCCCc------c
Confidence            66666666788999999999999999999999999999985  455565432221   112212222111111      1


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      .-...|+-|+..+.+++.+||..|.++||+++++..+|..
T Consensus       764 ~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~  803 (807)
T KOG1094|consen  764 VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE  803 (807)
T ss_pred             eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence            1123467788899999999999999999999999888764

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-42  Score=384.72  Aligned_cols=261  Identities=25%  Similarity=0.424  Sum_probs=222.0

Q ss_pred             cCCceeeeeeeecceEEEEEEEc----CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE----DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~----~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      +...+.++||.|.||+|++|+++    ....||||.++.. .+++..+|..|..+|.+++||||++|.|+.......+||
T Consensus       629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi  708 (996)
T KOG0196|consen  629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII  708 (996)
T ss_pred             hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence            44567889999999999999975    2357899999877 567788999999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      .|||++|+|..+|+.++ +.+++.++..++++||.||+||.   +.++|||||.++||||+.+..+|++||||+|...+.
T Consensus       709 TEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd  784 (996)
T KOG0196|consen  709 TEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  784 (996)
T ss_pred             hhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecccC
Confidence            99999999999998887 45999999999999999999998   599999999999999999999999999999976443


Q ss_pred             Cccc-cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          668 EHTH-VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       668 ~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      .... .....+-+.+|.|||.+..+++|.++|||||||||||.++ |.+|+.+....+.+                +.++
T Consensus       785 ~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVI----------------kaIe  848 (996)
T KOG0196|consen  785 PEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI----------------KAIE  848 (996)
T ss_pred             CCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHH----------------HHHH
Confidence            3221 2223344679999999999999999999999999999887 77887655432211                1223


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhh
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE  793 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~  793 (851)
                      ..++-.-|.+|+..+.+|++.||++|-.+||++.|++.+|.++++-..
T Consensus       849 ~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~  896 (996)
T KOG0196|consen  849 QGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPN  896 (996)
T ss_pred             hccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCch
Confidence            334445578999999999999999999999999999999998876543

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=7e-41  Score=349.49  Aligned_cols=250  Identities=27%  Similarity=0.381  Sum_probs=207.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      .++|+..++||+|+||+||.++.+ .++.+|+|.+++.   .....+...+|..+|.+++||.||+++-.+++...+|||
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            468999999999999999999865 4678899988765   344567788999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      +||+.||.|..+|...  ..+++..+.-.+..|+.||.|||+   ++||||||||+|||||.+|.++|+||||++.... 
T Consensus       104 ld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~-  177 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK-  177 (357)
T ss_pred             EeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhccc-
Confidence            9999999999999554  468888888899999999999994   9999999999999999999999999999986332 


Q ss_pred             CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                       ......+.+||+.|||||++.+..|+..+|.||+|+++|||++|.+||......      ++.......         +
T Consensus       178 -~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~------~~~~~I~~~---------k  241 (357)
T KOG0598|consen  178 -DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK------KMYDKILKG---------K  241 (357)
T ss_pred             -CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH------HHHHHHhcC---------c
Confidence             333455689999999999999999999999999999999999999999865322      222221111         1


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCC----CHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRP----TMGEVLWH  784 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP----t~~evl~~  784 (851)
                      + ...+.-.....++++.++|..||++|.    .+.++-+|
T Consensus       242 ~-~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~H  281 (357)
T KOG0598|consen  242 L-PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRH  281 (357)
T ss_pred             C-CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcC
Confidence            1 111222456689999999999999995    56676666

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.1e-42  Score=342.73  Aligned_cols=255  Identities=25%  Similarity=0.385  Sum_probs=205.5

Q ss_pred             CCceeeeeeeecceEEEEEE-EcCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEE-EEccCCc-EEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIG-FCDEQNE-MILVY  588 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~-~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g-~~~~~~~-~~lV~  588 (851)
                      +|.+.++||+|.||+|||+. +.++..+|.|.+.-.  +.+..+++..|+.+|++|+|||||++++ .+.++++ ++|||
T Consensus        20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm   99 (375)
T KOG0591|consen   20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM   99 (375)
T ss_pred             HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence            45667789999999999997 578889999987743  5566678999999999999999999999 4555566 89999


Q ss_pred             EecCCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCC-CeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          589 EYMANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAER-GIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       589 Ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~-~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      |||.+|+|..+++.  +....++++.+++++.|+++||.++|+...+ -|+||||||.||+|+.+|.+||+||||++...
T Consensus       100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~  179 (375)
T KOG0591|consen  100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS  179 (375)
T ss_pred             HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence            99999999999843  4456789999999999999999999963333 38999999999999999999999999999754


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      .  .........|||.||+||.+...+|+.|+||||+||++|||..-+.||.+.      ++.+...... .+..     
T Consensus       180 s--~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~~~L~~KI~-qgd~-----  245 (375)
T KOG0591|consen  180 S--KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------NLLSLCKKIE-QGDY-----  245 (375)
T ss_pred             c--hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------cHHHHHHHHH-cCCC-----
Confidence            3  233445678999999999999999999999999999999999999999865      2222222211 1111     


Q ss_pred             ccCCCCCC-hhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          746 PHLKGNYS-PESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       746 ~~l~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      |    ..+ .--+..+.+|+..|+..||+.||+.-.++..+.
T Consensus       246 ~----~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~  283 (375)
T KOG0591|consen  246 P----PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ  283 (375)
T ss_pred             C----CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence            1    112 345677999999999999999999655555543

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=3.8e-41  Score=339.67  Aligned_cols=266  Identities=23%  Similarity=0.309  Sum_probs=210.0

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh--hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE--QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      .|+...++|+|+||.|||++.+ .|+.||||++.....  .-.+-..+||++|++|+|||+|.|+++|.....++||+||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            4666778999999999999975 578999999876533  3345678999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      |++.-|.++-+..  ..++...+.+++.|+++|++|+|+   +++|||||||+||||+.++.+||||||+||....  ..
T Consensus        83 ~dhTvL~eLe~~p--~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~--pg  155 (396)
T KOG0593|consen   83 CDHTVLHELERYP--NGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSA--PG  155 (396)
T ss_pred             cchHHHHHHHhcc--CCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcC--Cc
Confidence            9985555443222  347788899999999999999994   9999999999999999999999999999997553  23


Q ss_pred             ccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHH---------hhhccc
Q 047215          671 HVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW---------QKQRSL  740 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~---------~~~~~~  740 (851)
                      ...+....|..|.|||.+.+ .+|...+||||+||++.||++|.+.|.+...-++..++.....-         .....+
T Consensus       156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F  235 (396)
T KOG0593|consen  156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF  235 (396)
T ss_pred             chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence            33456678999999999987 79999999999999999999999988887776666554333211         111111


Q ss_pred             ccccCccCC-----CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          741 KSIIDPHLK-----GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       741 ~~i~d~~l~-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      .-+.-|...     ..--+.....+.+++..||+.||.+|++.+|++.|--
T Consensus       236 ~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~y  286 (396)
T KOG0593|consen  236 HGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPY  286 (396)
T ss_pred             eeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChH
Confidence            111111111     0111344567889999999999999999999999943

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-40  Score=354.42  Aligned_cols=253  Identities=26%  Similarity=0.399  Sum_probs=204.3

Q ss_pred             CCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC--cEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN--EMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~--~~~lV~Ey  590 (851)
                      ++...+.||+|+||.||++...+ +...|||.....+....+.+.+|+.+|++++|||||+++|......  .+++.|||
T Consensus        18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy   97 (313)
T KOG0198|consen   18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY   97 (313)
T ss_pred             hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence            44556789999999999998754 7889999887664444677899999999999999999999854443  69999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-CCeEEEeeccccccCCC-CC
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-NFVAKMSDFGLSKTGPS-ME  668 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-~~~~kl~DFGla~~~~~-~~  668 (851)
                      +++|+|.+++..... .+++..+.+...||++||+|||+   ++||||||||+||||+. ++.+||+|||+++.... ..
T Consensus        98 ~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~  173 (313)
T KOG0198|consen   98 APGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT  173 (313)
T ss_pred             cCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence            999999999977665 79999999999999999999995   99999999999999999 79999999999986442 11


Q ss_pred             ccccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                      .........||+.|||||++..+ ....++|||||||+++||+||+.||...  .   ...++.......         .
T Consensus       174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~---~~~~~~~~ig~~---------~  239 (313)
T KOG0198|consen  174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--F---EEAEALLLIGRE---------D  239 (313)
T ss_pred             cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--c---chHHHHHHHhcc---------C
Confidence            22233457899999999999853 3445999999999999999999998753  1   111111111111         1


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..+.++...++..++++.+|++.+|++|||++++|+|
T Consensus       240 ~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h  276 (313)
T KOG0198|consen  240 SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH  276 (313)
T ss_pred             CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence            1124556677789999999999999999999999999

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.1e-40  Score=355.43  Aligned_cols=266  Identities=24%  Similarity=0.340  Sum_probs=209.3

Q ss_pred             cCCceeeeeeeecceEEEEEE-EcCcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccC--CcEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ--NEMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~-~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--~~~~lV  587 (851)
                      +.|+.+++||+|.||.||||+ ...++.||+|++....  +.......+||.+|++|+||||++|.+...+.  ..+|||
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            457777889999999999998 5678999999987653  44456678999999999999999999998766  789999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      +|||++ ||.-++.... -.+++.++..++.|++.||+|||+   ++|+|||||.+|||||.+|.+||+|||||+.....
T Consensus       197 FeYMdh-DL~GLl~~p~-vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~  271 (560)
T KOG0600|consen  197 FEYMDH-DLSGLLSSPG-VKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS  271 (560)
T ss_pred             Eecccc-hhhhhhcCCC-cccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence            999998 8887775543 468999999999999999999995   99999999999999999999999999999975443


Q ss_pred             CccccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc-----
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK-----  741 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~-----  741 (851)
                      ... ..+...-|+.|.|||.+.+. .|+.++|+||.||||.||++|++.+.+..+-+|...+-....-..+....     
T Consensus       272 ~~~-~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP  350 (560)
T KOG0600|consen  272 GSA-PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLP  350 (560)
T ss_pred             CCc-ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCC
Confidence            322 24555679999999999864 89999999999999999999999999887766654432221111111111     


Q ss_pred             --cccCccCC--CCC---ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          742 --SIIDPHLK--GNY---SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       742 --~i~d~~l~--~~~---~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                        .++.+...  ..+   -...+....+|+..+|..||.+|.|+.++|++
T Consensus       351 ~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s  400 (560)
T KOG0600|consen  351 HATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS  400 (560)
T ss_pred             cccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence              11111100  000   11234557789999999999999999999999

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=8.7e-40  Score=362.39  Aligned_cols=262  Identities=25%  Similarity=0.443  Sum_probs=205.4

Q ss_pred             HhcCCceeeeeeeecceEEEEEEE------cCcceeEEeecCCCC-hhhHHHHHHHHHHHHhc-CCcceeeEEEEEccC-
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEI------EDCTLAAIKRANPQS-EQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQ-  581 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~------~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~-  581 (851)
                      ..++|+..++||+|+||.||+|..      ..+..||+|++.... ......+.+|+.++.++ +||||++++++|... 
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (338)
T cd05102           5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN   84 (338)
T ss_pred             chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence            456788899999999999999974      234578999887543 33456789999999999 899999999998654 


Q ss_pred             CcEEEEEEecCCcchhhhccCCC---------------------------------------------------------
Q 047215          582 NEMILVYEYMANGTLRSHLFGSD---------------------------------------------------------  604 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~~---------------------------------------------------------  604 (851)
                      +..++||||+++|+|.+++....                                                         
T Consensus        85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (338)
T cd05102          85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD  164 (338)
T ss_pred             CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence            46899999999999999885421                                                         


Q ss_pred             ---CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCc
Q 047215          605 ---LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG  681 (851)
Q Consensus       605 ---~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~  681 (851)
                         ..++++.++.+++.|+++||+|||+   ++|+||||||+|||++.++.+||+|||+++...............++..
T Consensus       165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~  241 (338)
T cd05102         165 DLWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK  241 (338)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence               1347888999999999999999995   8999999999999999999999999999976432211112223446788


Q ss_pred             ccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHH
Q 047215          682 YLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKF  760 (851)
Q Consensus       682 y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l  760 (851)
                      |+|||++.+..++.++|||||||+||||++ |+.||......+.     ..... ..+.         ....+..++..+
T Consensus       242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-----~~~~~-~~~~---------~~~~~~~~~~~l  306 (338)
T cd05102         242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-----FCQRL-KDGT---------RMRAPENATPEI  306 (338)
T ss_pred             ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-----HHHHH-hcCC---------CCCCCCCCCHHH
Confidence            999999999999999999999999999997 8888865432211     11111 1110         011223455678


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          761 GEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       761 ~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      .+++.+||+.||.+|||+.|+++.|+.+++
T Consensus       307 ~~li~~cl~~dp~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         307 YRIMLACWQGDPKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            999999999999999999999999997754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8e-40  Score=346.07  Aligned_cols=265  Identities=24%  Similarity=0.351  Sum_probs=211.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .++|+..++||.|..++||+|+. ..+..||||++... +....+.+++|+..|+.++||||++++..|..+..+|+||.
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp  104 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP  104 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence            46889999999999999999985 55689999998765 33446889999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC-
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME-  668 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~-  668 (851)
                      ||.+|++.++++..-...+.+..+..|++++++||.|||   ++|.||||||+.||||+.+|.+||+|||.+....... 
T Consensus       105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~  181 (516)
T KOG0582|consen  105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD  181 (516)
T ss_pred             hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence            999999999997654455899999999999999999999   5999999999999999999999999999875433221 


Q ss_pred             ccccc-cccccCCcccCcccccc--cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          669 HTHVS-TAVKGSFGYLDPEYFWR--QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       669 ~~~~~-~~~~gt~~y~aPE~~~~--~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ..... ....||+.|||||+++.  ..|+.|+||||||+..+||.+|..||....|....     .+.+.  +......-
T Consensus       182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvL-----l~tLq--n~pp~~~t  254 (516)
T KOG0582|consen  182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVL-----LLTLQ--NDPPTLLT  254 (516)
T ss_pred             eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHH-----HHHhc--CCCCCccc
Confidence            11122 56789999999999653  47999999999999999999999999876543211     11111  11100000


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      ..+..+........+++++..||+.||++|||++++++|-.
T Consensus       255 ~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~F  295 (516)
T KOG0582|consen  255 SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAF  295 (516)
T ss_pred             ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHH
Confidence            01111111233457999999999999999999999999943

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=3.8e-40  Score=355.27  Aligned_cols=249  Identities=27%  Similarity=0.410  Sum_probs=212.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ++|.+.+.||+|+||.||||+-+ ..+.||+|.+.+.  .++..+.+.+|++++++|+|||||.++++++...++++|.|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            46777889999999999999865 4578899988764  45567789999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+.+ +|..+|...  ..++++++..|+.++..||.|||+   .+|+|||+||.||||+.++.+|+||||+||.+..  .
T Consensus        82 ~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~--~  153 (808)
T KOG0597|consen   82 YAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMST--N  153 (808)
T ss_pred             hhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhccc--C
Confidence            9987 999999543  468999999999999999999995   9999999999999999999999999999997543  4


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                      +.+.+.+.||+.|||||...+++|+..+|+||+||+|||+.+|++||....      +.+.+....        -||.  
T Consensus       154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s------i~~Lv~~I~--------~d~v--  217 (808)
T KOG0597|consen  154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS------ITQLVKSIL--------KDPV--  217 (808)
T ss_pred             ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH------HHHHHHHHh--------cCCC--
Confidence            556678899999999999999999999999999999999999999997432      112222111        1222  


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                       ..+......+..++...|.+||.+|.|-.+++.|-.
T Consensus       218 -~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF  253 (808)
T KOG0597|consen  218 -KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPF  253 (808)
T ss_pred             -CCcccccHHHHHHHHHHhhcChhhcccHHHHhcChH
Confidence             224466778999999999999999999999999943

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-40  Score=361.42  Aligned_cols=250  Identities=26%  Similarity=0.394  Sum_probs=212.6

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      ..|....+||+|..|.||.++. ..++.||||++........+-+.+|+.+|+..+|+|||.++..+..++++|.|||||
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym  352 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM  352 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence            3456667899999999999974 567889999988776666677899999999999999999999998889999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++|+|.|.+...   .+++.++..||++++.||+|||.   ++|||||||..|||++.++.+||+|||++.......  .
T Consensus       353 ~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~--~  424 (550)
T KOG0578|consen  353 EGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ--S  424 (550)
T ss_pred             CCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeecccccc--C
Confidence            999999998544   48999999999999999999995   999999999999999999999999999987654322  2


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      ...+..||+.|||||++....|.+|+||||||++++||+-|.+||-...|...+.+       ....     -.|.+  .
T Consensus       425 KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyL-------Ia~n-----g~P~l--k  490 (550)
T KOG0578|consen  425 KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-------IATN-----GTPKL--K  490 (550)
T ss_pred             ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHH-------Hhhc-----CCCCc--C
Confidence            45667899999999999999999999999999999999999999876544332211       1111     11222  3


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .++..+..+++|+.+||+.|+.+|+++.|+|+|
T Consensus       491 ~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  491 NPEKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             CccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            456677889999999999999999999999999

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-40  Score=359.40  Aligned_cols=269  Identities=26%  Similarity=0.467  Sum_probs=217.7

Q ss_pred             ccCHHHHHHHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEc
Q 047215          502 RFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCD  579 (851)
Q Consensus       502 ~~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~  579 (851)
                      ..+.++++...+.+.+...||+|.||+||+|++.+  .||||++...  ...+.+.|+.|+.++++-+|.||+-+.|||.
T Consensus       381 s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~  458 (678)
T KOG0193|consen  381 SDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACM  458 (678)
T ss_pred             CccccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhc
Confidence            44456666666777778899999999999999875  4788887654  5567889999999999999999999999999


Q ss_pred             cCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecc
Q 047215          580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG  659 (851)
Q Consensus       580 ~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFG  659 (851)
                      .+.. .||+.+|++-+|+.+|+-.+ ..+...+.+.|+.|||.||.|||+   ++|||||||..||+|.+++.|||+|||
T Consensus       459 ~p~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFG  533 (678)
T KOG0193|consen  459 NPPL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFG  533 (678)
T ss_pred             CCce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEeccc
Confidence            8877 99999999999999998765 568889999999999999999996   999999999999999999999999999


Q ss_pred             ccccCCCCCccccccccccCCcccCccccccc---CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchh-cHHHHHHHHh
Q 047215          660 LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ---QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI-NLADWAMKWQ  735 (851)
Q Consensus       660 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~-~l~~~~~~~~  735 (851)
                      |+................|...|||||+++.+   +|++.+||||||+|+|||+||..|+... ..++. -.+       
T Consensus       534 Latvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~-~~dqIifmV-------  605 (678)
T KOG0193|consen  534 LATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ-NRDQIIFMV-------  605 (678)
T ss_pred             ceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC-ChhheEEEe-------
Confidence            98653322222233445688899999999854   7999999999999999999999998733 32221 000       


Q ss_pred             hhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          736 KQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       736 ~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ..+.    ..+++ ......|++++++|+..||..++++||.+.+++..|+.++.
T Consensus       606 GrG~----l~pd~-s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  606 GRGY----LMPDL-SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             cccc----cCccc-hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            0000    00111 12335788899999999999999999999999999887765

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-40  Score=358.27  Aligned_cols=238  Identities=29%  Similarity=0.497  Sum_probs=202.6

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcchh
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR  597 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~  597 (851)
                      .+-||.|+.|.||+|++++. .||||+++..       -..+|+-|++|+||||+.+.|+|.....+|||||||+.|-|.
T Consensus       129 LeWlGSGaQGAVF~Grl~ne-tVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~  200 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRLHNE-TVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY  200 (904)
T ss_pred             hhhhccCcccceeeeeccCc-eehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence            45699999999999999875 4688876532       245899999999999999999999999999999999999999


Q ss_pred             hhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccc
Q 047215          598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK  677 (851)
Q Consensus       598 ~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~  677 (851)
                      ..|+..  ..++......+..+||.||+|||.   +.|||||||+-||||..+..+||+|||-++.....   ...-.++
T Consensus       201 ~VLka~--~~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STkMSFa  272 (904)
T KOG4721|consen  201 EVLKAG--RPITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK---STKMSFA  272 (904)
T ss_pred             HHHhcc--CccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccchHhhhhh---hhhhhhh
Confidence            999554  468888999999999999999995   99999999999999999999999999998864332   2334578


Q ss_pred             cCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHH
Q 047215          678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESL  757 (851)
Q Consensus       678 gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~  757 (851)
                      ||..|||||+++..+.++|+|||||||||||||||..|+.+......               +.-+-...|.-..+..|+
T Consensus       273 GTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI---------------IwGVGsNsL~LpvPstcP  337 (904)
T KOG4721|consen  273 GTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI---------------IWGVGSNSLHLPVPSTCP  337 (904)
T ss_pred             hhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee---------------EEeccCCcccccCcccCc
Confidence            99999999999999999999999999999999999998865432211               111112334445678899


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          758 EKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       758 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      +.++-|+++||+..|..||++++++.||+
T Consensus       338 ~GfklL~Kqcw~sKpRNRPSFrqil~Hld  366 (904)
T KOG4721|consen  338 DGFKLLLKQCWNSKPRNRPSFRQILLHLD  366 (904)
T ss_pred             hHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence            99999999999999999999999999986

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=9.2e-40  Score=353.17  Aligned_cols=255  Identities=23%  Similarity=0.316  Sum_probs=213.6

Q ss_pred             HHhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcE
Q 047215          510 VATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       510 ~~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~  584 (851)
                      ...++|...+.||+|+|++|++|+. +.++.+|||++.+.   .+.-.+....|-.+|.+| .||.|++|+-.|++...+
T Consensus        70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL  149 (604)
T KOG0592|consen   70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL  149 (604)
T ss_pred             CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence            3457888899999999999999985 56788999988754   233345677899999999 899999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      |+|+||+++|+|.++|+..  +.+++......+.+|+.||+|||+   +|||||||||+|||||+++++||+|||-|+..
T Consensus       150 YFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~l  224 (604)
T KOG0592|consen  150 YFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKIL  224 (604)
T ss_pred             EEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeeccccccC
Confidence            9999999999999999554  578999999999999999999995   99999999999999999999999999999875


Q ss_pred             CCCCcc-----------ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHH
Q 047215          665 PSMEHT-----------HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMK  733 (851)
Q Consensus       665 ~~~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~  733 (851)
                      ......           .......||..|.+||++.....+..+|+|+|||+||+|+.|.+||....+.-          
T Consensus       225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl----------  294 (604)
T KOG0592|consen  225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL----------  294 (604)
T ss_pred             ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH----------
Confidence            432211           11245789999999999999999999999999999999999999998764321          


Q ss_pred             HhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          734 WQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       734 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                           .+++|++  +.-.+++..++.+.+|+++.|..||.+|+|.+|+-+|.-
T Consensus       295 -----iFqkI~~--l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpF  340 (604)
T KOG0592|consen  295 -----IFQKIQA--LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPF  340 (604)
T ss_pred             -----HHHHHHH--hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcc
Confidence                 1222332  223455666678999999999999999999999999943

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-39  Score=355.48  Aligned_cols=255  Identities=27%  Similarity=0.399  Sum_probs=211.5

Q ss_pred             HhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC----Ch-hhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCc
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ----SE-QGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNE  583 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~----~~-~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~  583 (851)
                      ..++|...+.||+|+||.|++|.. ..+..+|+|.+...    .. ...+.+.+|+.++++++ ||||++++.++.....
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~   94 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK   94 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence            346788889999999999999975 45688999976653    11 23456778999999998 9999999999999999


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCC-CeEEEeeccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN-FVAKMSDFGLSK  662 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~-~~~kl~DFGla~  662 (851)
                      .++||||+.+|+|.+++..  ..++.+.+..+++.|++.|++|||+   ++|+||||||+|||++.+ +++||+|||++.
T Consensus        95 ~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~  169 (370)
T KOG0583|consen   95 IYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFGLSA  169 (370)
T ss_pred             EEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence            9999999999999999966  4578889999999999999999995   999999999999999999 999999999998


Q ss_pred             cCCCCCccccccccccCCcccCcccccccC-CC-chHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL  740 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~t-~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  740 (851)
                      ...  .......+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||.......   +   ...       
T Consensus       170 ~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~---l---~~k-------  234 (370)
T KOG0583|consen  170 ISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN---L---YRK-------  234 (370)
T ss_pred             ccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH---H---HHH-------
Confidence            753  2334456789999999999999877 86 78999999999999999999998732211   1   111       


Q ss_pred             ccccCccCCCCCChhH-HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          741 KSIIDPHLKGNYSPES-LEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       741 ~~i~d~~l~~~~~~~~-~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                        |....  -.++... +..++.|+.+||..||.+|+|+.+++.|         +|++.
T Consensus       235 --i~~~~--~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h---------~w~~~  280 (370)
T KOG0583|consen  235 --IRKGE--FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEH---------PWFQK  280 (370)
T ss_pred             --HhcCC--ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhC---------hhhcc
Confidence              11111  1223333 6778999999999999999999999988         88876

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-40  Score=364.01  Aligned_cols=266  Identities=27%  Similarity=0.452  Sum_probs=216.6

Q ss_pred             HHHHhcCCceeeeeeeecceEEEEEEEcCc----ce-eEEeecCC---CChhhHHHHHHHHHHHHhcCCcceeeEEEEEc
Q 047215          508 IRVATNNFDESLMIGVGGFGKVFKGEIEDC----TL-AAIKRANP---QSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD  579 (851)
Q Consensus       508 l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~----~~-vavK~~~~---~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~  579 (851)
                      ++...++....++||+|+||.||+|++...    .. ||||....   .......+|.+|.++|++++|||||+++|++.
T Consensus       152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~  231 (474)
T KOG0194|consen  152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV  231 (474)
T ss_pred             cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            444455556668999999999999987532    23 79998875   35777899999999999999999999999999


Q ss_pred             cCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecc
Q 047215          580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG  659 (851)
Q Consensus       580 ~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFG  659 (851)
                      ....+++|||+|+||+|.++|..... .++..++++++.++|.||+|||+   +++|||||.++|||++.++.+||+|||
T Consensus       232 ~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFG  307 (474)
T KOG0194|consen  232 LEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFG  307 (474)
T ss_pred             CCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCccc
Confidence            99999999999999999999976553 68999999999999999999995   999999999999999999999999999


Q ss_pred             ccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhc
Q 047215          660 LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQR  738 (851)
Q Consensus       660 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~  738 (851)
                      |++........  ...-.-+..|+|||.+....++.++|||||||++||+++ |..|+.+....   .+..         
T Consensus       308 Ls~~~~~~~~~--~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~---~v~~---------  373 (474)
T KOG0194|consen  308 LSRAGSQYVMK--KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY---EVKA---------  373 (474)
T ss_pred             cccCCcceeec--cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH---HHHH---------
Confidence            99875421111  111235679999999999999999999999999999999 66666554322   1111         


Q ss_pred             ccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhh
Q 047215          739 SLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEA  794 (851)
Q Consensus       739 ~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~  794 (851)
                         .+.-...+...+...+..+..++.+|+..+|++||||.++.+.|+.+....++
T Consensus       374 ---kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  374 ---KIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA  426 (474)
T ss_pred             ---HHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence               12122333445567788899999999999999999999999999988765543

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-40  Score=346.05  Aligned_cols=248  Identities=26%  Similarity=0.395  Sum_probs=209.5

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .|...++||+|.||.||||... .++.||+|++... .....++.++|+.+|.+++|+||.+++|.+..+..++++||||
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            3455568999999999999854 5678999998765 5566788999999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      .+|++.+.|...  ..+.+.++.-|++++..||.|||+   ++.+|||||+.|||+..+|.+||+|||.+.......  .
T Consensus        94 ~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~--~  166 (467)
T KOG0201|consen   94 GGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV--K  166 (467)
T ss_pred             cCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeechh--h
Confidence            999999999544  345888889999999999999995   899999999999999999999999999997654322  2


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      ...+..||+.|||||++++..|+.|+||||||++++||++|.+|+....|...+.+            +.+-..|.+.+ 
T Consensus       167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl------------Ipk~~PP~L~~-  233 (467)
T KOG0201|consen  167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL------------IPKSAPPRLDG-  233 (467)
T ss_pred             ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe------------ccCCCCCcccc-
Confidence            23678899999999999999999999999999999999999999887665332111            11122344444 


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                         .....+++|+..||++||+.||++.++|+|
T Consensus       234 ---~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  234 ---DFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             ---ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence               445569999999999999999999999998

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-40  Score=351.10  Aligned_cols=263  Identities=24%  Similarity=0.337  Sum_probs=211.0

Q ss_pred             cCCceeeeeeeecceEEEEEE-EcCcceeEEeecCCCChhhHHH--HHHHHHHHHhcC-CcceeeEEEEEccCC-cEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAE--FETEIEMLSKLR-HRHLVSLIGFCDEQN-EMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~-~~~~~~vavK~~~~~~~~~~~~--~~~Ei~~l~~l~-HpnIv~l~g~~~~~~-~~~lV  587 (851)
                      ++|...++||.|.||.||+|+ .+.+..||||+++..-.. +++  =.+|++.|++|+ |||||+|.+++.+.+ .+++|
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            567788899999999999997 467888999998765322 232  357999999998 999999999997777 99999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      ||||+. +|.++++.+ ...+++..+..|+.||++||+|+|   ++|+.|||+||+|||+..+..+||+||||||.....
T Consensus        89 fE~Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk  163 (538)
T KOG0661|consen   89 FEFMDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK  163 (538)
T ss_pred             HHhhhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccccccC
Confidence            999987 999999777 678999999999999999999999   699999999999999999999999999999975432


Q ss_pred             CccccccccccCCcccCccccc-ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcc------c
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS------L  740 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~-~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~------~  740 (851)
                         ...+....|..|.|||++. ...|+.+.|||++|||++||.+-++.|.+..+.++...+.-+........      +
T Consensus       164 ---pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~L  240 (538)
T KOG0661|consen  164 ---PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNL  240 (538)
T ss_pred             ---CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHH
Confidence               2345566899999999875 56899999999999999999999999988777666544333322111111      1


Q ss_pred             cccc---CccCCC----CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 KSII---DPHLKG----NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 ~~i~---d~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ...+   -|...+    ..-+.++.++.+++.+||+.||.+|||+.|+|+|
T Consensus       241 a~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  241 ASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             HHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence            1111   111111    1112367789999999999999999999999999

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-39  Score=382.20  Aligned_cols=264  Identities=27%  Similarity=0.414  Sum_probs=216.7

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC--c----ceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED--C----TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~--~----~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~  584 (851)
                      ..+.+..+.||+|.||.||+|++.+  +    ..||||.+.+. +.+...+|.+|..+|+.++|||||+++|+|......
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~  770 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP  770 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence            3455667889999999999998754  2    24789988775 667788999999999999999999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCC-----CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecc
Q 047215          585 ILVYEYMANGTLRSHLFGSD-----LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG  659 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~-----~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFG  659 (851)
                      +|++|||++|+|..+|++.+     ...++..+++.++.|||+|+.|||+   +++|||||.++|+||+....+||+|||
T Consensus       771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFG  847 (1025)
T KOG1095|consen  771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFG  847 (1025)
T ss_pred             EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccc
Confidence            99999999999999997752     3468899999999999999999995   999999999999999999999999999


Q ss_pred             ccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCc-CCCCCCCcchhcHHHHHHHHhhhc
Q 047215          660 LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA-VINPTLPKDQINLADWAMKWQKQR  738 (851)
Q Consensus       660 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~-p~~~~~~~~~~~l~~~~~~~~~~~  738 (851)
                      |||.....+..+......-+..|||||.+..+.++.|+|||||||+|||++|-.. |+......+...      .+...+
T Consensus       848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~------~~~~gg  921 (1025)
T KOG1095|consen  848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLL------DVLEGG  921 (1025)
T ss_pred             hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHH------HHHhCC
Confidence            9996554444433333334579999999999999999999999999999999655 444333222110      111111


Q ss_pred             ccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhh
Q 047215          739 SLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEA  794 (851)
Q Consensus       739 ~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~  794 (851)
                                +-+.+..|++.+.++|..||+.+|++||++..+++.+..+.+....
T Consensus       922 ----------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~  967 (1025)
T KOG1095|consen  922 ----------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALG  967 (1025)
T ss_pred             ----------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhcc
Confidence                      2245678999999999999999999999999999998888765443

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=1.9e-38  Score=342.85  Aligned_cols=260  Identities=22%  Similarity=0.303  Sum_probs=206.3

Q ss_pred             cccCHHHHHHHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhh---HHHHHHHHHHHHhcCCcceeeEEEE
Q 047215          501 KRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQG---LAEFETEIEMLSKLRHRHLVSLIGF  577 (851)
Q Consensus       501 ~~~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~---~~~~~~Ei~~l~~l~HpnIv~l~g~  577 (851)
                      +.++.+++..     .....||+|++|.||+|.+ +++.+|||++.......   .+.|.+|+.+|++++||||++++|+
T Consensus        13 ~~i~~~~i~~-----~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~   86 (283)
T PHA02988         13 KCIESDDIDK-----YTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGF   86 (283)
T ss_pred             eecCHHHcCC-----CCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeee
Confidence            3455555522     2235799999999999998 56788999887643322   5678899999999999999999999


Q ss_pred             Ecc----CCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeE
Q 047215          578 CDE----QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA  653 (851)
Q Consensus       578 ~~~----~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~  653 (851)
                      +.+    ....++||||+++|+|.+++...  ..+++....+++.+++.||.|||+  ..+++||||||+|||+++++.+
T Consensus        87 ~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~  162 (283)
T PHA02988         87 IIDIVDDLPRLSLILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKL  162 (283)
T ss_pred             EEecccCCCceEEEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcE
Confidence            866    45789999999999999999654  468899999999999999999995  3578899999999999999999


Q ss_pred             EEeeccccccCCCCCccccccccccCCcccCcccccc--cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHH
Q 047215          654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR--QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA  731 (851)
Q Consensus       654 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~  731 (851)
                      ||+|||+++.....     .....|+..|+|||++.+  ..++.++|||||||++|||++|+.||......+   +   .
T Consensus       163 kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~---~---~  231 (283)
T PHA02988        163 KIICHGLEKILSSP-----PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE---I---Y  231 (283)
T ss_pred             EEcccchHhhhccc-----cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH---H---H
Confidence            99999998753321     123457899999999976  689999999999999999999999997543221   1   1


Q ss_pred             HHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          732 MKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       732 ~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ....         ........+..++..+.+++.+||+.||.+|||++|+++.|+...+
T Consensus       232 ~~i~---------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        232 DLII---------NKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             HHHH---------hcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence            1111         0111112334567789999999999999999999999999886653

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=7e-38  Score=394.14  Aligned_cols=268  Identities=25%  Similarity=0.435  Sum_probs=218.5

Q ss_pred             cCHHHHHHHhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC
Q 047215          503 FTLAEIRVATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ  581 (851)
Q Consensus       503 ~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~  581 (851)
                      ++++++.   ..+...++||+|+||.||+|+. .++..+|||++......    ...|++.+++++|||||+++|+|..+
T Consensus       683 ~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~  755 (968)
T PLN00113        683 ITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSE  755 (968)
T ss_pred             hhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcC
Confidence            4455543   3566778899999999999986 57788999988654322    23568899999999999999999999


Q ss_pred             CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccc
Q 047215          582 NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla  661 (851)
                      +..++|||||++|+|.++++     .++|.++.+++.|+|+||+|||+.+.++|+||||||+||+++.++.+++. ||..
T Consensus       756 ~~~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~  829 (968)
T PLN00113        756 KGAYLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLP  829 (968)
T ss_pred             CCCEEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccc
Confidence            99999999999999999994     37899999999999999999997666899999999999999999888876 6665


Q ss_pred             ccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK  741 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  741 (851)
                      .....      .....+|..|+|||++.+..++.++|||||||++|||+||+.|+..... ......+|+..........
T Consensus       830 ~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~  902 (968)
T PLN00113        830 GLLCT------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCHLD  902 (968)
T ss_pred             ccccc------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccchh
Confidence            43211      1123578999999999999999999999999999999999999865432 2345777877655555556


Q ss_pred             cccCccCCCC--CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          742 SIIDPHLKGN--YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       742 ~i~d~~l~~~--~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      .++|+.+...  ...+....+.+++.+||+.||++||||+|+++.|+.+.+
T Consensus       903 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        903 MWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             heeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            6677766443  345667788999999999999999999999999987754

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-39  Score=324.17  Aligned_cols=245  Identities=24%  Similarity=0.354  Sum_probs=209.4

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||.|+||.|.+.+.+ ++..+|+|++...   ...+.+...+|..+|+.+.||.+++|.+.|.+.+.++|||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            46777889999999999999865 5678899998865   3455677889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|.|..+|+..  +++++......+.+|+.||+|||+   .+|++|||||+|||||.+|.+||+|||.|+....  
T Consensus       124 eyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~--  196 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG--  196 (355)
T ss_pred             eccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEecC--
Confidence            999999999999554  479999999999999999999995   9999999999999999999999999999987433  


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                         ..-+.|||+.|+|||.++..++..++|.|||||++|||++|.+||....+..               ..+.|+...+
T Consensus       197 ---rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~---------------iY~KI~~~~v  258 (355)
T KOG0616|consen  197 ---RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ---------------IYEKILEGKV  258 (355)
T ss_pred             ---cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH---------------HHHHHHhCcc
Confidence               2567899999999999999999999999999999999999999998776521               1122333332


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCC-----CCHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNR-----PTMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~R-----Pt~~evl~~  784 (851)
                        .+|.-....+++|+.+.|+.|-.+|     +...+|-.|
T Consensus       259 --~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H  297 (355)
T KOG0616|consen  259 --KFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNH  297 (355)
T ss_pred             --cCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccC
Confidence              3455556678999999999999999     345677777

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=8.3e-39  Score=318.12  Aligned_cols=264  Identities=23%  Similarity=0.323  Sum_probs=210.6

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChh--hHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQ--GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .+|...++||+|.||.||+|+. +.++.||||+++.....  ......+||+.|+.++|+||+.|++++...+.+-||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            3566677899999999999985 56889999998866332  23457899999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      ||+. +|...++.+. ..++..++..++.++++||+|||+   +.|+||||||.|+|++.+|.+||+|||+|+.......
T Consensus        82 fm~t-dLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~  156 (318)
T KOG0659|consen   82 FMPT-DLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR  156 (318)
T ss_pred             eccc-cHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence            9986 9998887665 468899999999999999999995   9999999999999999999999999999998655443


Q ss_pred             cccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc--------
Q 047215          670 THVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL--------  740 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~--------  740 (851)
                      ..  +...-|..|.|||.+.+ +.|+..+||||.||++.||+-|.+.+.+...-+|...+-.+.........        
T Consensus       157 ~~--~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpd  234 (318)
T KOG0659|consen  157 IQ--THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPD  234 (318)
T ss_pred             cc--ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccccc
Confidence            32  23357899999999875 57999999999999999999998888776665555433222211111111        


Q ss_pred             ----ccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 ----KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 ----~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                          .....+.+. ..-+.+.....+|+.+++..||.+|+|++|+++|
T Consensus       235 Y~~~~~~P~~~~~-~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  235 YVKIQQFPKPPLN-NLFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             HHHHhcCCCCccc-cccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence                111111111 2334566677999999999999999999999999

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=3.7e-38  Score=340.83  Aligned_cols=252  Identities=24%  Similarity=0.366  Sum_probs=204.3

Q ss_pred             CCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .|+..+.||+|+||.||++.. .+++.+|+|.+....   ......+.+|+.++++++|+||+++++++..++..++|||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            367788999999999999986 567889999876432   2334567899999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++|+|.+++.......+++.++..++.|++.||+|||+   .+|+||||||+|||+++++.+||+|||++....... 
T Consensus        81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-  156 (285)
T cd05631          81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE-  156 (285)
T ss_pred             ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-
Confidence            9999999988865544568999999999999999999995   899999999999999999999999999987643211 


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                        ......||..|+|||++.+..++.++|||||||++|||++|+.||..........  .....         +...  .
T Consensus       157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~--~~~~~---------~~~~--~  221 (285)
T cd05631         157 --TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKRE--EVDRR---------VKED--Q  221 (285)
T ss_pred             --eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHH--HHHHH---------hhcc--c
Confidence              1234568999999999999999999999999999999999999997643321110  00000         0000  1


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPT-----MGEVLWH  784 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  784 (851)
                      ..++...+..+.+|+.+||+.||.+||+     ++++++|
T Consensus       222 ~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         222 EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence            1233345567899999999999999997     8999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6e-39  Score=353.22  Aligned_cols=245  Identities=26%  Similarity=0.331  Sum_probs=206.8

Q ss_pred             CceeeeeeeecceEEEEEEE-cCcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          515 FDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      |+..+.||+|+.|.|-.|++ ..|+.+|||++...   +......+.+||.+|+-+.||||++|++++++..++|+|.||
T Consensus        14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy   93 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY   93 (786)
T ss_pred             eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence            45566799999999999986 57899999998765   333345688999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++|.|.++|..  .+++++.+..+.++||+.|+.|+|.   .+|+||||||+|+|||..+++||+|||+|....   ..
T Consensus        94 v~gGELFdylv~--kG~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~---~g  165 (786)
T KOG0588|consen   94 VPGGELFDYLVR--KGPLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEV---PG  165 (786)
T ss_pred             cCCchhHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeeccc---CC
Confidence            999999999954  4579999999999999999999995   999999999999999999999999999998733   33


Q ss_pred             ccccccccCCcccCcccccccCCC-chHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t-~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                      ....+-||++.|.+||++++.+|+ .++||||+|||||.||||+.||++..-   ..+..   . .+.+          .
T Consensus       166 klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi---r~LLl---K-V~~G----------~  228 (786)
T KOG0588|consen  166 KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI---RVLLL---K-VQRG----------V  228 (786)
T ss_pred             ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH---HHHHH---H-HHcC----------c
Confidence            345678999999999999999885 689999999999999999999984321   11111   1 1111          1


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      -+.|...+.++++|+.+||..||++|.|++||++|
T Consensus       229 f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  229 FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence            13345666779999999999999999999999999

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=9.2e-38  Score=340.87  Aligned_cols=263  Identities=24%  Similarity=0.435  Sum_probs=204.0

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC-----------------cceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceee
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED-----------------CTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVS  573 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~-----------------~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~  573 (851)
                      .++|...++||+|+||.||++..++                 +..+|+|.+... ......+|.+|++++.+++||||++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            3578888999999999999997543                 236899988764 3445567999999999999999999


Q ss_pred             EEEEEccCCcEEEEEEecCCcchhhhccCCC-----------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeE
Q 047215          574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSD-----------------LPPLTWKQRLDACIGAARGLHYLHTGAERGII  636 (851)
Q Consensus       574 l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~-----------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~ii  636 (851)
                      +++++...+..++||||+++|+|.+++....                 ...+++.++.+++.|++.||.|||+   .+|+
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~iv  160 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFV  160 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCcc
Confidence            9999999999999999999999999884321                 1347888999999999999999995   8999


Q ss_pred             EcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhC--Cc
Q 047215          637 HRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA--RA  714 (851)
Q Consensus       637 HrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG--~~  714 (851)
                      ||||||+|||++.++.+||+|||+++...............++..|+|||++....++.++||||||+++|||+++  ..
T Consensus       161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~  240 (304)
T cd05096         161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ  240 (304)
T ss_pred             ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence            9999999999999999999999999764332222222334567899999999988999999999999999999874  44


Q ss_pred             CCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          715 VINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       715 p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      |+......   ...............      ......++.++..+.+++.+||+.+|.+|||+.++.+.|+
T Consensus       241 p~~~~~~~---~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         241 PYGELTDE---QVIENAGEFFRDQGR------QVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             CCCcCCHH---HHHHHHHHHhhhccc------cccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            55543221   122222221111100      0111223456678999999999999999999999988865

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.2e-39  Score=316.02  Aligned_cols=248  Identities=24%  Similarity=0.374  Sum_probs=211.3

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|++.+.||+|.||.||.|+.+ ++-.+|+|++.+.   ..+...++.+|+++-+.|+||||+++++++.+....||++
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil  101 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL  101 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence            56888899999999999999865 4567899987654   2233457899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||.+.|+|...|+.....++++........|+|.||.|+|   .++||||||||+|+|++..+..||+|||-+...+   
T Consensus       102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p---  175 (281)
T KOG0580|consen  102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---  175 (281)
T ss_pred             EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecC---
Confidence            9999999999998777788999999999999999999999   5999999999999999999999999999987633   


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                       .....+.|||..|++||+..+...+.++|+|++|++.||++.|.+||......+   .            ..+|...  
T Consensus       176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e---t------------YkrI~k~--  237 (281)
T KOG0580|consen  176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE---T------------YKRIRKV--  237 (281)
T ss_pred             -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH---H------------HHHHHHc--
Confidence             334567899999999999999999999999999999999999999997654211   1            0111111  


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .-.++...+..+++++.+|+..+|.+|.+..|+++|
T Consensus       238 ~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  238 DLKFPSTISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             cccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence            112334555678999999999999999999999999

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=9.7e-38  Score=342.73  Aligned_cols=262  Identities=22%  Similarity=0.358  Sum_probs=207.3

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-Ccc----eeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCT----LAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~----~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .+|+..+.||+|+||.||+|++. ++.    .+|+|.+... .....+++.+|+.+++.++||||++++|+|..+ ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            56888999999999999999863 333    3789988654 344567899999999999999999999999765 5789


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ++||+++|+|.+++.... ..+++..+++++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus        86 v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~  161 (316)
T cd05108          86 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  161 (316)
T ss_pred             eeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccccC
Confidence            999999999999986543 357889999999999999999995   8999999999999999999999999999986543


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ...........++..|+|||++.+..++.++|||||||++|||++ |+.|+......+   +..    ....        
T Consensus       162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~---~~~----~~~~--------  226 (316)
T cd05108         162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISS----ILEK--------  226 (316)
T ss_pred             CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHH----HHhC--------
Confidence            222212223335678999999999999999999999999999998 888876432211   111    1111        


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhh
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAW  795 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w  795 (851)
                       ......++.+...+.+++.+||+.+|.+||++.+++.+|..+......|
T Consensus       227 -~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~~~  275 (316)
T cd05108         227 -GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY  275 (316)
T ss_pred             -CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCchh
Confidence             1111123345567899999999999999999999999988877655544

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=7e-38  Score=346.20  Aligned_cols=262  Identities=24%  Similarity=0.312  Sum_probs=204.6

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .++|+..+.||+|+||.||+++.. .+..+|+|.+... .......+.+|+++|++++||||+++++++..++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            478999999999999999999875 5677888887654 33445679999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++|+|.+++...  ..+++..+..++.|++.||.|||+  ..+|+||||||+|||++.++.+||+|||+++.....  
T Consensus        84 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--  157 (331)
T cd06649          84 HMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--  157 (331)
T ss_pred             cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence            99999999998553  358899999999999999999996  457999999999999999999999999998754221  


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHh-h--h---------
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ-K--Q---------  737 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~-~--~---------  737 (851)
                        ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+   +........ .  .         
T Consensus       158 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  232 (331)
T cd06649         158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE---LEAIFGRPVVDGEEGEPHSISPR  232 (331)
T ss_pred             --ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHhcccccccccCCccccCcc
Confidence              1234568999999999999999999999999999999999999986433211   100000000 0  0         


Q ss_pred             ----------------------cccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          738 ----------------------RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       738 ----------------------~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                                            .....+.............+..+++|+.+||+.||++|||++|+++|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h  301 (331)
T cd06649         233 PRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH  301 (331)
T ss_pred             cccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence                                  00000000000000011245679999999999999999999999999

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=2.7e-38  Score=355.35  Aligned_cols=259  Identities=24%  Similarity=0.381  Sum_probs=202.6

Q ss_pred             hcCCceeeeeeeecceEEEEEEE------cCcceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCc
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNE  583 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~------~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~  583 (851)
                      .++|+..+.||+|+||.||+|+.      +.+..+|||++... .....+.+.+|+.+++.+ +||||++++++|..++.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            45677788999999999999964      23457899988654 234456788999999999 89999999999999999


Q ss_pred             EEEEEEecCCcchhhhccCCC-----------------------------------------------------------
Q 047215          584 MILVYEYMANGTLRSHLFGSD-----------------------------------------------------------  604 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~-----------------------------------------------------------  604 (851)
                      .++||||+++|+|.+++....                                                           
T Consensus       114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS  193 (375)
T ss_pred             ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence            999999999999999885421                                                           


Q ss_pred             --------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          605 --------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       605 --------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                                    ...+++..+.+++.|+++||+|||+   ++++||||||+|||++.++.+||+|||+++........
T Consensus       194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  270 (375)
T cd05104         194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY  270 (375)
T ss_pred             ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence                          1247888999999999999999995   89999999999999999999999999999764332221


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                      .......++..|+|||.+.+..++.++|||||||++|||++ |..||.......  ....+    ...+         ..
T Consensus       271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~~~~----~~~~---------~~  335 (375)
T cd05104         271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KFYKM----IKEG---------YR  335 (375)
T ss_pred             cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HHHHH----HHhC---------cc
Confidence            12223345678999999999999999999999999999998 777775432211  11111    1111         01


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      ...+...+..+.+|+.+||+.||++|||+.|+++.|+..
T Consensus       336 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         336 MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            111223346789999999999999999999999998853

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=4.5e-38  Score=335.30  Aligned_cols=250  Identities=34%  Similarity=0.530  Sum_probs=197.6

Q ss_pred             eeeeeeeecceEEEEEEEc-----CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          517 ESLMIGVGGFGKVFKGEIE-----DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       517 ~~~~LG~G~fG~Vykg~~~-----~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ..+.||.|.||.||+|.+.     .+..|+||.+... .....+.|.+|++.+++++||||++++|+|...+..++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            4678999999999999987     2467899999664 444578999999999999999999999999988889999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++|+|.++|.......+++.++.+|+.|+++||.|||+   .+++|+||+++||+++.++.+||+|||+++........
T Consensus        83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~  159 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY  159 (259)
T ss_dssp             -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred             ccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence            999999999988756779999999999999999999996   88999999999999999999999999999875322222


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                      ...........|+|||.+....++.++||||||+++|||++ |+.|+.....      .+..........          
T Consensus       160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~------~~~~~~~~~~~~----------  223 (259)
T PF07714_consen  160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN------EEIIEKLKQGQR----------  223 (259)
T ss_dssp             EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH------HHHHHHHHTTEE----------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccc------cccccccccccc----------
Confidence            33344457789999999999889999999999999999999 6677654321      112222211111          


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                      ...+..++..+.+++.+||+.+|.+|||++++++.|
T Consensus       224 ~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  224 LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            122344567799999999999999999999999875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-38  Score=336.08  Aligned_cols=253  Identities=27%  Similarity=0.404  Sum_probs=203.7

Q ss_pred             HhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCCh--------------hhHHHHHHHHHHHHhcCCcceeeEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSE--------------QGLAEFETEIEMLSKLRHRHLVSLI  575 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~--------------~~~~~~~~Ei~~l~~l~HpnIv~l~  575 (851)
                      .-|.|++.+.||+|.||.|-+|+. .+++.+|||++.+...              ...+...+||.+|++|+|||||+|+
T Consensus        95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li  174 (576)
T KOG0585|consen   95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI  174 (576)
T ss_pred             ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence            347899999999999999999985 4678999998765421              1235788999999999999999999


Q ss_pred             EEEcc--CCcEEEEEEecCCcchhhhccCCCCCC-CchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe
Q 047215          576 GFCDE--QNEMILVYEYMANGTLRSHLFGSDLPP-LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV  652 (851)
Q Consensus       576 g~~~~--~~~~~lV~Ey~~~gsL~~~L~~~~~~~-l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~  652 (851)
                      .+..+  .+.+|||+|||..|.+...   ....+ +++.+..+++.++..||+|||.   ++||||||||+|+||+++|+
T Consensus       175 EvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~g~  248 (576)
T KOG0585|consen  175 EVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSDGT  248 (576)
T ss_pred             EeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCCCc
Confidence            99864  4689999999999888544   23334 9999999999999999999996   99999999999999999999


Q ss_pred             EEEeeccccccCCC---CCccccccccccCCcccCcccccccC----CCchHHHHHHHHHHHHHHhCCcCCCCCCCcchh
Q 047215          653 AKMSDFGLSKTGPS---MEHTHVSTAVKGSFGYLDPEYFWRQQ----LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI  725 (851)
Q Consensus       653 ~kl~DFGla~~~~~---~~~~~~~~~~~gt~~y~aPE~~~~~~----~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~  725 (851)
                      +||+|||.+.....   ...........||+.|+|||.+.++.    .+.+.||||+||+||.|+.|+.||.+....+  
T Consensus       249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~--  326 (576)
T KOG0585|consen  249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE--  326 (576)
T ss_pred             EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH--
Confidence            99999999875321   11222233467999999999998632    4568899999999999999999997653221  


Q ss_pred             cHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          726 NLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       726 ~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                                   ...+|+...+.-...++..+.+++|++++|++||++|.+..+|..|
T Consensus       327 -------------l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H  372 (576)
T KOG0585|consen  327 -------------LFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH  372 (576)
T ss_pred             -------------HHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence                         1233444444333344677889999999999999999999999999

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=5.8e-38  Score=352.36  Aligned_cols=262  Identities=25%  Similarity=0.406  Sum_probs=205.4

Q ss_pred             HHhcCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccC
Q 047215          510 VATNNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQ  581 (851)
Q Consensus       510 ~~t~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~  581 (851)
                      ...++|+..+.||+|+||.||+|+..      +...+|+|++... .......+.+|+.+++.+ +||||++++++|...
T Consensus        35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~  114 (374)
T cd05106          35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG  114 (374)
T ss_pred             ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence            34467888899999999999998742      2357899998754 334456788999999999 899999999999999


Q ss_pred             CcEEEEEEecCCcchhhhccCCC---------------------------------------------------------
Q 047215          582 NEMILVYEYMANGTLRSHLFGSD---------------------------------------------------------  604 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~~---------------------------------------------------------  604 (851)
                      +..++||||+++|+|.++++...                                                         
T Consensus       115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (374)
T cd05106         115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS  194 (374)
T ss_pred             CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence            99999999999999999885321                                                         


Q ss_pred             -----------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          605 -----------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       605 -----------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                                 ..++++.++.+++.|+++||.|||+   ++|+||||||+|||+++++.+||+|||+++...........
T Consensus       195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~  271 (374)
T cd05106         195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVK  271 (374)
T ss_pred             ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeec
Confidence                       1247888899999999999999995   89999999999999999999999999998764332221122


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY  752 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~  752 (851)
                      ....++..|+|||++.+..++.++|||||||++|||++ |+.||........  .   . .....         ......
T Consensus       272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~--~---~-~~~~~---------~~~~~~  336 (374)
T cd05106         272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK--F---Y-KMVKR---------GYQMSR  336 (374)
T ss_pred             cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH--H---H-HHHHc---------ccCccC
Confidence            23345678999999998899999999999999999997 9988865432211  0   0 00000         111111


Q ss_pred             ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       753 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                      +...+..+.+++.+||+.||.+|||+.++++.|+.+.
T Consensus       337 ~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         337 PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            2233567899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=4.6e-38  Score=340.64  Aligned_cols=263  Identities=21%  Similarity=0.344  Sum_probs=214.1

Q ss_pred             HHHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcE
Q 047215          509 RVATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       509 ~~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~  584 (851)
                      +...++|+..++||+|+||.||+++.+ .|..+|+|++++.   ...+.+..+.|-.+|...++|+||+|+..|++...+
T Consensus       137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L  216 (550)
T KOG0605|consen  137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL  216 (550)
T ss_pred             cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence            335688999999999999999999865 5788999999876   345667788999999999999999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ||||||++||++..+|...  ..|++......+.+++.|+.-||   +.|+|||||||+|+|||..|.+||+||||+.-.
T Consensus       217 YLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl  291 (550)
T KOG0605|consen  217 YLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL  291 (550)
T ss_pred             EEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchh
Confidence            9999999999999999554  46888888899999999999999   699999999999999999999999999998421


Q ss_pred             CC----------------------CCcc----cc-------------------ccccccCCcccCcccccccCCCchHHH
Q 047215          665 PS----------------------MEHT----HV-------------------STAVKGSFGYLDPEYFWRQQLTEKSDV  699 (851)
Q Consensus       665 ~~----------------------~~~~----~~-------------------~~~~~gt~~y~aPE~~~~~~~t~ksDV  699 (851)
                      ..                      .+..    ..                   .....|||.|||||++.+..|+..+|.
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw  371 (550)
T KOG0605|consen  292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW  371 (550)
T ss_pred             hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence            00                      0000    00                   113469999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCcCCCCCCCcch-hcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCC-
Q 047215          700 YSFGVVLFEVVCARAVINPTLPKDQ-INLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT-  777 (851)
Q Consensus       700 wS~GvvL~eLltG~~p~~~~~~~~~-~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-  777 (851)
                      ||+|||+||||.|.+||....+.+. ..+..|...+..              .-...+..+..+||.+||. ||.+|.- 
T Consensus       372 WSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~f--------------P~~~~~s~eA~DLI~rll~-d~~~RLG~  436 (550)
T KOG0605|consen  372 WSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKF--------------PEEVDLSDEAKDLITRLLC-DPENRLGS  436 (550)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccC--------------CCcCcccHHHHHHHHHHhc-CHHHhcCc
Confidence            9999999999999999998876543 233334322211              1112334778999999999 9999974 


Q ss_pred             --HHHHHHHHHHHHHhhhhhcccCC
Q 047215          778 --MGEVLWHLEYVLQLHEAWMRTDD  800 (851)
Q Consensus       778 --~~evl~~L~~~~~~~~~w~~~~~  800 (851)
                        ++||-+|         +|+..-+
T Consensus       437 ~G~~EIK~H---------PfF~~v~  452 (550)
T KOG0605|consen  437 KGAEEIKKH---------PFFKGVD  452 (550)
T ss_pred             ccHHHHhcC---------CccccCC
Confidence              8888888         7766544

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=1.1e-37  Score=336.31  Aligned_cols=256  Identities=27%  Similarity=0.440  Sum_probs=206.5

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCc------ceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDC------TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~------~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      ++|+..+.||+|+||.||+|.....      ..+++|.+... .......|.+|+.++++++||||+++++++......+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            3577788999999999999986432      46888987654 3344567999999999999999999999999999999


Q ss_pred             EEEEecCCcchhhhccCCCC--------------CCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC
Q 047215          586 LVYEYMANGTLRSHLFGSDL--------------PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF  651 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~  651 (851)
                      ++|||+++|+|.+++.....              ..+++.+++.++.|++.||.|||+   .+++||||||+||++++++
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~  161 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGL  161 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCC
Confidence            99999999999999854321              457889999999999999999995   8999999999999999999


Q ss_pred             eEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHH
Q 047215          652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADW  730 (851)
Q Consensus       652 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~  730 (851)
                      .+||+|||+++...............+++.|+|||.+....++.++|||||||++|||++ |+.||....+.+   +...
T Consensus       162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~---~~~~  238 (283)
T cd05048         162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE---VIEM  238 (283)
T ss_pred             cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHH
Confidence            999999999876433222222334456889999999988899999999999999999998 988887543321   1111


Q ss_pred             HHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          731 AMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       731 ~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                          ...         ......+..++..+.+|+.+||+.||.+||++.|++++|+.
T Consensus       239 ----i~~---------~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         239 ----IRS---------RQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             ----HHc---------CCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence                111         11112345667889999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=2e-37  Score=335.01  Aligned_cols=266  Identities=20%  Similarity=0.265  Sum_probs=203.7

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ++|+..+.||+|+||.||+++.. ++..+|+|++...  .....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            46889999999999999999975 5678899987653  23345678899999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |++++.+..+...  ...+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.......
T Consensus        81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  155 (287)
T cd07848          81 YVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN  155 (287)
T ss_pred             cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence            9999877655432  2468899999999999999999995   8999999999999999999999999999976432211


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHH---------HHHhhhccc
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA---------MKWQKQRSL  740 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~---------~~~~~~~~~  740 (851)
                       .......|++.|+|||++.+..++.++|||||||++|||++|+.||......+........         .........
T Consensus       156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (287)
T cd07848         156 -ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRF  234 (287)
T ss_pred             -ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchh
Confidence             1223456899999999999889999999999999999999999998764332221111100         000000001


Q ss_pred             ccccCccCCC------CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 KSIIDPHLKG------NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 ~~i~d~~l~~------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .....+....      ......+..+.+|+.+||+.||++|||++|+++|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h  284 (287)
T cd07848         235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH  284 (287)
T ss_pred             cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            1111111100      1112345679999999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.3e-38  Score=340.09  Aligned_cols=245  Identities=22%  Similarity=0.267  Sum_probs=202.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..++||+|+||.||+|... +++.+|+|++...   .....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            46888899999999999999875 5788999987643   2234567889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++..+..++.|++.||+|||+   ++++||||||+|||++.++.+||+|||+++..... 
T Consensus        81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-  154 (291)
T cd05612          81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-  154 (291)
T ss_pred             eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence            999999999998543  468899999999999999999995   89999999999999999999999999998764321 


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                          .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+      ......         ... 
T Consensus       155 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~------~~~~i~---------~~~-  214 (291)
T cd05612         155 ----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG------IYEKIL---------AGK-  214 (291)
T ss_pred             ----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHH---------hCC-
Confidence                223568999999999999999999999999999999999999987543221      111111         001 


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPT-----MGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  784 (851)
                       ..++......+++++.+||+.||.+||+     ++++++|
T Consensus       215 -~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         215 -LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             -cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence             1123334566899999999999999995     9999999

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=2.8e-37  Score=330.34  Aligned_cols=256  Identities=23%  Similarity=0.372  Sum_probs=205.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc----CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE----DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~----~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .++|+..+.||+|+||.||+|.+.    .+..+|+|.+... .......|.+|+.++++++||||+++++++..++..++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            356888899999999999999763    3467899988765 33445678999999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+++|+|.+++.... ..+++.+++.++.|++.||+|||   +.+++||||||+|||++.++.+|++|||.+.....
T Consensus        84 v~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~  159 (266)
T cd05064          84 VTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS  159 (266)
T ss_pred             EEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence            999999999999986543 46899999999999999999999   48999999999999999999999999998765322


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      .. ........++..|+|||.+.+..++.++|||||||++||+++ |+.||......+   ..+   .. ..+       
T Consensus       160 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~---~~~---~~-~~~-------  224 (266)
T cd05064         160 EA-IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD---VIK---AV-EDG-------  224 (266)
T ss_pred             cc-hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHH---HH-HCC-------
Confidence            11 111122345678999999999999999999999999999875 988886543221   111   11 111       


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                        .....+..++..+.+++.+||+.+|.+||+++++++.|..+
T Consensus       225 --~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         225 --FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             --CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence              11122345667799999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.5e-38  Score=345.42  Aligned_cols=253  Identities=23%  Similarity=0.375  Sum_probs=204.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+|+.. .++.+|+|++...   .......+..|+.++.+++||||+++++++..++..++||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            46888999999999999999975 4678999988653   2234567889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....  
T Consensus        81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~--  153 (333)
T cd05600          81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT--  153 (333)
T ss_pred             eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence            999999999999543  468899999999999999999995   8999999999999999999999999999875332  


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                         ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+..   .....+.  ..   +..+..
T Consensus       154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~---~~i~~~~--~~---~~~~~~  222 (333)
T cd05600         154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETW---ENLKYWK--ET---LQRPVY  222 (333)
T ss_pred             ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHH---HHHHhcc--cc---ccCCCC
Confidence               223456899999999999999999999999999999999999998764432211   1111100  00   001111


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      . ......+..+.+++.+||..+|.+||+++++++|
T Consensus       223 ~-~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         223 D-DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             C-ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            0 0012345678999999999999999999999999

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=1.9e-37  Score=335.72  Aligned_cols=265  Identities=23%  Similarity=0.378  Sum_probs=201.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++|...++||+|+||.||+|+.+ ++..+|+|.+.... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            46888899999999999999865 56789999876442 23345678999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++ +|.+++.... ..+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++....... 
T Consensus        85 ~~~-~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~-  158 (288)
T cd07871          85 LDS-DLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK-  158 (288)
T ss_pred             CCc-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc-
Confidence            985 8888875432 357889999999999999999995   8999999999999999999999999999875332111 


Q ss_pred             ccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHH------Hh---hhccc
Q 047215          671 HVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMK------WQ---KQRSL  740 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~------~~---~~~~~  740 (851)
                       ......+++.|+|||++.+ ..++.++||||+||++|||++|+.||......+..........      +.   .....
T Consensus       159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (288)
T cd07871         159 -TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEF  237 (288)
T ss_pred             -cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhh
Confidence             1233467899999999865 5689999999999999999999999876543332211110000      00   00000


Q ss_pred             ccccCccCCC----CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 KSIIDPHLKG----NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 ~~i~d~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .....+....    ...+.....+.+++.+||+.||.+|||++|+++|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h  285 (288)
T cd07871         238 RSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH  285 (288)
T ss_pred             hccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            1111111100    0112345668899999999999999999999999

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=1.5e-37  Score=336.57  Aligned_cols=262  Identities=24%  Similarity=0.345  Sum_probs=198.4

Q ss_pred             cCCceeeeeeeecceEEEEEEEc--CcceeEEeecCCCC--hhhHHHHHHHHHHHHhc---CCcceeeEEEEEc-----c
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE--DCTLAAIKRANPQS--EQGLAEFETEIEMLSKL---RHRHLVSLIGFCD-----E  580 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~--~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l---~HpnIv~l~g~~~-----~  580 (851)
                      ++|+..+.||+|+||.||+|+..  ++..+|+|++....  ......+.+|+.+++++   +||||++++++|.     .
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            36888899999999999999863  46788999876432  22234566788777766   6999999999984     3


Q ss_pred             CCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccc
Q 047215          581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL  660 (851)
Q Consensus       581 ~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGl  660 (851)
                      ...+++||||++ ++|.+++.......+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Dfg~  156 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGL  156 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccccc
Confidence            456899999997 589888866555668999999999999999999995   8999999999999999999999999999


Q ss_pred             cccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh---h
Q 047215          661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK---Q  737 (851)
Q Consensus       661 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~---~  737 (851)
                      ++.....   .......||+.|+|||.+.+..++.++|||||||++|||++|+.||......+...   .......   .
T Consensus       157 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~---~i~~~~~~~~~  230 (290)
T cd07862         157 ARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG---KILDVIGLPGE  230 (290)
T ss_pred             eEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHH---HHHHHhCCCCh
Confidence            9764322   22334568999999999998899999999999999999999999987654332211   1111000   0


Q ss_pred             ccc-------ccccCccCC---CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          738 RSL-------KSIIDPHLK---GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       738 ~~~-------~~i~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ...       .....+...   ....+..+..+.+++.+||+.||++|||+.|+++|
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h  287 (290)
T cd07862         231 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  287 (290)
T ss_pred             hhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence            000       000000000   01112345678899999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8e-38  Score=333.08  Aligned_cols=266  Identities=24%  Similarity=0.414  Sum_probs=200.0

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHh--cCCcceeeEEEEEccCC----cEEEEEEec
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSK--LRHRHLVSLIGFCDEQN----EMILVYEYM  591 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~--l~HpnIv~l~g~~~~~~----~~~lV~Ey~  591 (851)
                      .++||+|+||.||||.+.+ +.||||++...   ..+.|.+|-++.+.  ++|+||+++++.-+...    +++||+||.
T Consensus       215 ~eli~~Grfg~V~KaqL~~-~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh  290 (534)
T KOG3653|consen  215 LELIGRGRFGCVWKAQLDN-RLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFH  290 (534)
T ss_pred             HHHhhcCccceeehhhccC-ceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeec
Confidence            4469999999999999887 78999998754   44567777777665  58999999999987666    899999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcC------CCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG------AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~------~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      ++|+|.++|..+.   ++|....+|+..+++||+|||++      .+++|+|||||++||||..++++.|+|||||....
T Consensus       291 ~kGsL~dyL~~nt---isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~  367 (534)
T KOG3653|consen  291 PKGSLCDYLKANT---ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLE  367 (534)
T ss_pred             cCCcHHHHHHhcc---ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEec
Confidence            9999999996654   89999999999999999999975      36679999999999999999999999999998766


Q ss_pred             CCCccccccccccCCcccCccccccc-CCC-----chHHHHHHHHHHHHHHhCCcCCCC-CCCcchhcHHHHHHHHhhhc
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQ-QLT-----EKSDVYSFGVVLFEVVCARAVINP-TLPKDQINLADWAMKWQKQR  738 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t-----~ksDVwS~GvvL~eLltG~~p~~~-~~~~~~~~l~~~~~~~~~~~  738 (851)
                      ............||.+|||||++.+. .+.     .+.||||+|.|||||++......+ ..++-+..+...+......+
T Consensus       368 p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e  447 (534)
T KOG3653|consen  368 PGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLE  447 (534)
T ss_pred             CCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHH
Confidence            54444445568899999999999753 222     468999999999999998765542 22221211111111100001


Q ss_pred             cccc-ccCccCCCCCC-----hhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          739 SLKS-IIDPHLKGNYS-----PESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       739 ~~~~-i~d~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      .+++ ++..+.++.++     ...+..+++.+..||+.||+.|.|+.=|-+.+..+..
T Consensus       448 ~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  448 EMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM  505 (534)
T ss_pred             HHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence            1111 11111122221     2456779999999999999999999988888766543

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=8.6e-38  Score=344.25  Aligned_cols=242  Identities=24%  Similarity=0.328  Sum_probs=198.7

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCc
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANG  594 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~g  594 (851)
                      ++||+|+||.||+++.. +++.+|+|++...   .......+.+|+.++++++||||+++++++..++..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            36999999999999864 6788999987653   2334566788999999999999999999999999999999999999


Q ss_pred             chhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccccc
Q 047215          595 TLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST  674 (851)
Q Consensus       595 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~  674 (851)
                      +|.+++...  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.....  .....
T Consensus        81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~--~~~~~  153 (323)
T cd05571          81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD--GATMK  153 (323)
T ss_pred             cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC--CCccc
Confidence            999988543  468899999999999999999995   89999999999999999999999999998753221  12233


Q ss_pred             ccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCCh
Q 047215          675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSP  754 (851)
Q Consensus       675 ~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~  754 (851)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||.......   +...   . ..+      +.    .++.
T Consensus       154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~---~~~~---~-~~~------~~----~~p~  216 (323)
T cd05571         154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---LFEL---I-LME------EI----RFPR  216 (323)
T ss_pred             ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH---HHHH---H-HcC------CC----CCCC
Confidence            4679999999999999999999999999999999999999986532211   1110   0 000      11    2234


Q ss_pred             hHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          755 ESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       755 ~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                      ..+..+.+++.+||+.||++||     ++.++++|
T Consensus       217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  251 (323)
T cd05571         217 TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH  251 (323)
T ss_pred             CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence            4556789999999999999999     89999999

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.4e-37  Score=317.93  Aligned_cols=271  Identities=23%  Similarity=0.325  Sum_probs=211.2

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh-hhH-HHHHHHHHHHHhcCCcceeeEEEEEc--cCCcEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE-QGL-AEFETEIEMLSKLRHRHLVSLIGFCD--EQNEMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~-~~~-~~~~~Ei~~l~~l~HpnIv~l~g~~~--~~~~~~lV  587 (851)
                      ++|+..+.|++|+||.||+|+.+ ....||+|+++...+ .+. -.-.+||.+|.+++|||||.+-.+..  +-+..|||
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            45677788999999999999864 567899999876532 221 23578999999999999999988864  44679999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      ||||++ +|..++.... +++...++.-+..|+++|++|||   ...|+|||||++|+|++..|.+||+||||||.....
T Consensus       156 Me~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp  230 (419)
T KOG0663|consen  156 MEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP  230 (419)
T ss_pred             HHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence            999998 8888886655 67899999999999999999999   489999999999999999999999999999976543


Q ss_pred             CccccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC-
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID-  745 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d-  745 (851)
                      ..  ..+...-|+.|.|||.+.+. .|+...|+||+|||+.||+++++.|.+....+|.+.+-.......+........ 
T Consensus       231 ~k--~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l  308 (419)
T KOG0663|consen  231 LK--PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL  308 (419)
T ss_pred             cc--cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence            22  23556679999999999865 699999999999999999999999988776666544322222111111100000 


Q ss_pred             -------------ccCCCCCChh-HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          746 -------------PHLKGNYSPE-SLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       746 -------------~~l~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                                   ..++..+... ..+.-.+|+..+|..||.+|.|++|.|+|         .|+.+.
T Consensus       309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h---------~~F~e~  367 (419)
T KOG0663|consen  309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH---------EYFRET  367 (419)
T ss_pred             chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc---------cccccC
Confidence                         0122222222 44677899999999999999999999999         888763

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=3.6e-37  Score=340.73  Aligned_cols=261  Identities=23%  Similarity=0.315  Sum_probs=203.0

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .++|+..++||+|+||.||++... .+..+++|.+... .......+.+|++++++++||||++++++|..++..++|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            478899999999999999999876 4677888877654 33445678999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++|+|.+++...  ..+++..+..++.|++.||.|||+  ..+++||||||+|||++.++.+||+|||++......  
T Consensus        84 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--  157 (333)
T cd06650          84 HMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--  157 (333)
T ss_pred             cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--
Confidence            99999999998543  357889999999999999999995  457999999999999999999999999998753221  


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc---------
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL---------  740 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~---------  740 (851)
                        ......|+..|+|||++.+..++.++|||||||++|||++|+.||..........    .......+..         
T Consensus       158 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  231 (333)
T cd06650         158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELEL----MFGCPVEGDPAESETSPRP  231 (333)
T ss_pred             --ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHH----HhcCcccCCccccccCccc
Confidence              1233568999999999999899999999999999999999999986543211100    0000000000         


Q ss_pred             --------------------ccccCcc---CCCCCC-hhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 --------------------KSIIDPH---LKGNYS-PESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 --------------------~~i~d~~---l~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                                          ..+.+..   .....+ ......+++|+.+||+.||++|||+.|+++|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h  299 (333)
T cd06650         232 RPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH  299 (333)
T ss_pred             CCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence                                0000000   000000 1134568999999999999999999999999

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=9.8e-37  Score=353.13  Aligned_cols=252  Identities=20%  Similarity=0.280  Sum_probs=205.1

Q ss_pred             CCceeeeeeeecceEEEEEEEc-C-cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-D-CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .|...+.||+|+||.||+|... + +..+++|.+..........+.+|+.+|+.++||||+++++++..++..+|||||+
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            3888899999999999999753 3 4677888776655566677889999999999999999999999999999999999


Q ss_pred             CCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          592 ANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       592 ~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      ++|+|.++|+.  ....++++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++.......
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~  224 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS  224 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence            99999988754  234568899999999999999999995   8999999999999999999999999999986433222


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                      .......+||+.|+|||++.+..++.++|||||||++|||++|+.||......      +...... .+        .. 
T Consensus       225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~------~~~~~~~-~~--------~~-  288 (478)
T PTZ00267        225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR------EIMQQVL-YG--------KY-  288 (478)
T ss_pred             cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHH-hC--------CC-
Confidence            22334567999999999999999999999999999999999999998643221      1111110 01        00 


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ...+..++..+.+++.+||+.+|++||++++++.+
T Consensus       289 ~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~  323 (478)
T PTZ00267        289 DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT  323 (478)
T ss_pred             CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence            01223445678999999999999999999999887

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=1.7e-37  Score=330.45  Aligned_cols=256  Identities=26%  Similarity=0.421  Sum_probs=212.7

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +..+|+..++||+|+||.||+|...++..+++|.+..........+..|+.++++++||||+++++++......++||||
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            44567888899999999999999888889999998877665677899999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++|+|.+++.......+++.++.+++.|++.||.|||+   .+++||||||+||++++++.+||+|||++........ 
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~-  159 (261)
T cd05148          84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY-  159 (261)
T ss_pred             cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCccc-
Confidence            999999999977666678999999999999999999994   8999999999999999999999999999876432211 


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                       ......++..|+|||.+....++.++||||||+++++|++ |+.|+......+   ....   ..          ....
T Consensus       160 -~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~---~~~~---~~----------~~~~  222 (261)
T cd05148         160 -LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE---VYDQ---IT----------AGYR  222 (261)
T ss_pred             -cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH---HHHH---HH----------hCCc
Confidence             1223345778999999998899999999999999999998 788876543211   1111   10          1111


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      ...+..++..+.+++.+||+.||.+|||+.++++.|+.
T Consensus       223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         223 MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            22334566779999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=2.9e-37  Score=341.83  Aligned_cols=264  Identities=24%  Similarity=0.308  Sum_probs=197.1

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC-----CcEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ-----NEMI  585 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~-----~~~~  585 (851)
                      +|+..++||+|+||.||+|+.. ++..+|||++...  .......+.+|++++++++||||+++++++...     ...+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            4778899999999999999864 6788999987643  223445688999999999999999999988533     3589


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      +||||++ ++|.+++...  ..+++..+..++.|+++||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        81 lv~e~~~-~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~  154 (338)
T cd07859          81 VVFELME-SDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARVAF  154 (338)
T ss_pred             EEEecCC-CCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCccccccc
Confidence            9999996 6888888543  358999999999999999999995   899999999999999999999999999997533


Q ss_pred             CCCcc-ccccccccCCcccCcccccc--cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHH---------HHHH
Q 047215          666 SMEHT-HVSTAVKGSFGYLDPEYFWR--QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD---------WAMK  733 (851)
Q Consensus       666 ~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~---------~~~~  733 (851)
                      ..... .......||+.|+|||++.+  ..++.++|||||||++|||++|+.||.............         +...
T Consensus       155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (338)
T cd07859         155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR  234 (338)
T ss_pred             cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence            21111 11234568999999999875  678999999999999999999999986543322111100         0000


Q ss_pred             Hhhh---cccccccCccCCCCC---ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          734 WQKQ---RSLKSIIDPHLKGNY---SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       734 ~~~~---~~~~~i~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ....   ..+..+ .+......   -+..+..+.+++.+||+.||++|||++|+++|
T Consensus       235 i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         235 VRNEKARRYLSSM-RKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             hhhhhHHHHHHhh-cccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            0000   000000 00000000   11234568899999999999999999999999

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=1.2e-37  Score=344.04  Aligned_cols=245  Identities=23%  Similarity=0.348  Sum_probs=202.7

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+|+.. +++.+|+|.+...   .....+.+.+|+.++++++||||+++++++..++..++||
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            57888999999999999999875 5678999987643   2234567889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++..... 
T Consensus        98 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-  171 (329)
T PTZ00263         98 EFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR-  171 (329)
T ss_pred             cCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC-
Confidence            999999999998654  357888899999999999999995   89999999999999999999999999998764321 


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                          .....||+.|+|||++.+..++.++|||||||++|||++|+.||....+...      ...         +....+
T Consensus       172 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------~~~---------i~~~~~  232 (329)
T PTZ00263        172 ----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI------YEK---------ILAGRL  232 (329)
T ss_pred             ----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH------HHH---------HhcCCc
Confidence                1235789999999999999999999999999999999999999865432111      111         111111


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPT-----MGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  784 (851)
                        .++...+..+.+|+.+||+.||.+||+     +++++.|
T Consensus       233 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        233 --KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             --CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence              122334456899999999999999997     7999999

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.3e-37  Score=326.92  Aligned_cols=256  Identities=27%  Similarity=0.450  Sum_probs=207.7

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ..++|+..+.||+|++|.||+|...+++.+++|.+.... ...+++.+|+.++++++||||+++++++...+..++||||
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL   82 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence            456788899999999999999998777889999886543 3356789999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++.......+++.++..++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++....... 
T Consensus        83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-  158 (261)
T cd05068          83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY-  158 (261)
T ss_pred             ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc-
Confidence            999999999976555578999999999999999999994   8999999999999999999999999999876432111 


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                      ........+..|+|||++.+..++.++||||||++++||++ |+.|+.......   +..   .. ..         ...
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~---~~-~~---------~~~  222 (261)
T cd05068         159 EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE---VLQ---QV-DQ---------GYR  222 (261)
T ss_pred             cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHH---HH-Hc---------CCC
Confidence            11112223457999999999999999999999999999999 888876432211   110   00 00         011


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      ...+..++..+.+++.+||+.+|.+||++.++++.|+.
T Consensus       223 ~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         223 MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            12233456779999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=7.1e-37  Score=326.94  Aligned_cols=257  Identities=26%  Similarity=0.415  Sum_probs=207.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC----cceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED----CTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~----~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .++|+..+.||+|+||.||+|.+..    ...+++|.+... ......+|.+|+.++++++||||+++++++...+..++
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i   82 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI   82 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence            3578889999999999999998743    357899987654 34445678999999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+++++|.+++.... ..+++.++.+++.|++.||.|||+   .+++||||||+|||+++++.+||+|||+++....
T Consensus        83 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  158 (266)
T cd05033          83 ITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED  158 (266)
T ss_pred             EEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence            999999999999986543 368999999999999999999994   9999999999999999999999999999987542


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ...........++..|+|||.+.+..++.++||||||+++|||++ |..|+......   ...+..    ...       
T Consensus       159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~----~~~-------  224 (266)
T cd05033         159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ---DVIKAV----EDG-------  224 (266)
T ss_pred             cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH---HHHHHH----HcC-------
Confidence            222222223345678999999998999999999999999999998 88887543211   111111    110       


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                        .....+..++..+.+++.+||+.+|++||+++|++++|+.+
T Consensus       225 --~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         225 --YRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             --CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence              01112234567799999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-37  Score=343.74  Aligned_cols=249  Identities=26%  Similarity=0.394  Sum_probs=209.2

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~  585 (851)
                      .-++|...++||+|.||+|+++..+. ++.+|||.+++.   ..+..+....|.+++... +||.+++|+.+++..++++
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~  445 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF  445 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence            44789999999999999999999764 568899988875   456678888999998887 5999999999999999999


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      +||||+.||++..+.+   ...+++..+.-++..|+.||+|||   +++||+||||.+|||||.+|.+||+||||++...
T Consensus       446 fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m  519 (694)
T KOG0694|consen  446 FVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM  519 (694)
T ss_pred             EEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccccC
Confidence            9999999999554443   245899999999999999999999   5999999999999999999999999999998744


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      .  ......+.|||+.|||||++.+..|+..+|.|||||+|||||.|..||.+..+++.               ...|+.
T Consensus       520 ~--~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~---------------FdsI~~  582 (694)
T KOG0694|consen  520 G--QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV---------------FDSIVN  582 (694)
T ss_pred             C--CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH---------------HHHHhc
Confidence            3  23356789999999999999999999999999999999999999999987654331               111221


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTM-----GEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~evl~~  784 (851)
                      .  ...+|.-++.+...|++++|.++|++|..+     ++|.+|
T Consensus       583 d--~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h  624 (694)
T KOG0694|consen  583 D--EVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH  624 (694)
T ss_pred             C--CCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhC
Confidence            1  123456667778999999999999999865     566666

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=5.1e-37  Score=326.94  Aligned_cols=255  Identities=25%  Similarity=0.421  Sum_probs=207.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .++|+..++||+|+||.||+|...++..+++|.+.... ...+.+.+|+.++++++||||+++++++..++..+++|||+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM   83 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence            36788899999999999999998888889999876543 33578899999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++|+|.+++.......+++.++..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+++....... .
T Consensus        84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-~  159 (261)
T cd05072          84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-T  159 (261)
T ss_pred             CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCce-e
Confidence            99999999976555678899999999999999999995   8999999999999999999999999999976432211 1


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      ......++..|+|||++....++.++|||||||++|||++ |+.||.......   ...+   .. ..     .    ..
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~~---~~-~~-----~----~~  223 (261)
T cd05072         160 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD---VMSA---LQ-RG-----Y----RM  223 (261)
T ss_pred             ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH---HHHH---HH-cC-----C----CC
Confidence            1223345678999999998899999999999999999998 888876432211   1111   11 00     0    01


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      .....++..+.+++.+||+.+|++||+++++++.|+.
T Consensus       224 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         224 PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            1122345678999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=3.2e-37  Score=341.62  Aligned_cols=262  Identities=26%  Similarity=0.429  Sum_probs=204.9

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCCC-hhhHHHHHHHHHHHHhc-CCcceeeEEEEEc-cC
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQS-EQGLAEFETEIEMLSKL-RHRHLVSLIGFCD-EQ  581 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~-~~  581 (851)
                      ..++|++.++||+|+||.||+|...      .++.+|+|++.... ......+.+|+.++.++ +||||++++++|. .+
T Consensus         5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~   84 (337)
T cd05054           5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG   84 (337)
T ss_pred             CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence            3457888899999999999999642      24679999887542 33456688899999999 8999999999885 45


Q ss_pred             CcEEEEEEecCCcchhhhccCCC---------------------------------------------------------
Q 047215          582 NEMILVYEYMANGTLRSHLFGSD---------------------------------------------------------  604 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~~---------------------------------------------------------  604 (851)
                      ...++++||+++|+|.++|....                                                         
T Consensus        85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (337)
T cd05054          85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE  164 (337)
T ss_pred             CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence            67899999999999998885321                                                         


Q ss_pred             --CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcc
Q 047215          605 --LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY  682 (851)
Q Consensus       605 --~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y  682 (851)
                        ..+++|..+.+++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...............++..|
T Consensus       165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y  241 (337)
T cd05054         165 LYKEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW  241 (337)
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence              1268899999999999999999995   89999999999999999999999999999864332221122334567789


Q ss_pred             cCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHH
Q 047215          683 LDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFG  761 (851)
Q Consensus       683 ~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~  761 (851)
                      +|||++.+..++.++|||||||+|+||++ |..||......+.  +.    .....+         .....+...+..+.
T Consensus       242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~--~~----~~~~~~---------~~~~~~~~~~~~~~  306 (337)
T cd05054         242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE--FC----RRLKEG---------TRMRAPEYATPEIY  306 (337)
T ss_pred             cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH--HH----HHHhcc---------CCCCCCccCCHHHH
Confidence            99999999999999999999999999998 8888865432211  11    111111         01111233456789


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          762 EIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       762 ~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      +++.+||+.+|++||++.|++++|+.+++
T Consensus       307 ~l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         307 SIMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            99999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=5.8e-37  Score=346.15  Aligned_cols=261  Identities=23%  Similarity=0.380  Sum_probs=205.4

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcC------cceeEEeecCCCC-hhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCC
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIED------CTLAAIKRANPQS-EQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQN  582 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~------~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~  582 (851)
                      ..++|.+.++||+|+||.||+|+...      +..+|||++.... ....+.+.+|+++|+++. ||||++++++|...+
T Consensus        35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~  114 (400)
T cd05105          35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG  114 (400)
T ss_pred             cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence            45678888999999999999998532      2468999987543 344567999999999996 999999999999999


Q ss_pred             cEEEEEEecCCcchhhhccCCC----------------------------------------------------------
Q 047215          583 EMILVYEYMANGTLRSHLFGSD----------------------------------------------------------  604 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~----------------------------------------------------------  604 (851)
                      ..+|||||+++|+|.++|+...                                                          
T Consensus       115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (400)
T cd05105         115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI  194 (400)
T ss_pred             ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence            9999999999999998875321                                                          


Q ss_pred             ------------------------------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc
Q 047215          605 ------------------------------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD  648 (851)
Q Consensus       605 ------------------------------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld  648 (851)
                                                          ...+++.++++++.|+++||.|||+   .+++||||||+|||++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~  271 (400)
T cd05105         195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLA  271 (400)
T ss_pred             hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEe
Confidence                                                1247788899999999999999995   8999999999999999


Q ss_pred             CCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcH
Q 047215          649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINL  727 (851)
Q Consensus       649 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l  727 (851)
                      .++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.|+........  +
T Consensus       272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~--~  349 (400)
T cd05105         272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST--F  349 (400)
T ss_pred             CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH--H
Confidence            999999999999876432222112223446788999999998899999999999999999997 8888764322111  0


Q ss_pred             HHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          728 ADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       728 ~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                          ......+         .....+..++..+.+++.+||+.+|++||++.++.+.|+.+.
T Consensus       350 ----~~~~~~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~  398 (400)
T cd05105         350 ----YNKIKSG---------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL  398 (400)
T ss_pred             ----HHHHhcC---------CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence                0000000         111223455677999999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=8.2e-37  Score=330.69  Aligned_cols=264  Identities=28%  Similarity=0.431  Sum_probs=210.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      ++|...+.||+|+||.||++...      ++..+++|.+..........+.+|+.++++++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            57788889999999999999742      235678998877666667789999999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCC-----------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEE
Q 047215          587 VYEYMANGTLRSHLFGSD-----------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM  655 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl  655 (851)
                      ||||+++++|.+++....           ...+++.+++.++.|++.||+|||+   ++++||||||+|||+++++.+||
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEe
Confidence            999999999999985322           2358999999999999999999994   89999999999999999999999


Q ss_pred             eeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHH
Q 047215          656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKW  734 (851)
Q Consensus       656 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~  734 (851)
                      +|||+++...............++..|+|||++.+..++.++|||||||+++||++ |..|+......+   ..   ...
T Consensus       162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~---~~---~~i  235 (288)
T cd05093         162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VI---ECI  235 (288)
T ss_pred             ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HH---HHH
Confidence            99999875433222222223345778999999999999999999999999999998 787775443211   11   111


Q ss_pred             hhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhh
Q 047215          735 QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAW  795 (851)
Q Consensus       735 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w  795 (851)
                       ..+..     +    ..+...+..+.+++.+||+.+|.+|||++++++.|+.+.+....|
T Consensus       236 -~~~~~-----~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~~~~  286 (288)
T cd05093         236 -TQGRV-----L----QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKASPVY  286 (288)
T ss_pred             -HcCCc-----C----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhcccc
Confidence             11110     0    111234456899999999999999999999999999887655444

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=5.6e-37  Score=329.84  Aligned_cols=257  Identities=25%  Similarity=0.388  Sum_probs=203.6

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcC------cceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCc
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIED------CTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE  583 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~------~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~  583 (851)
                      .+++|+..+.||+|+||.||+|...+      +..+|+|++... ......+|.+|+.++++++||||+++++++..+..
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            56789999999999999999997542      356899987643 23445678999999999999999999999999999


Q ss_pred             EEEEEEecCCcchhhhccCCC--------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEE
Q 047215          584 MILVYEYMANGTLRSHLFGSD--------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM  655 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~--------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl  655 (851)
                      .++||||+++|+|.+++....        ...+++.+++.++.|++.||.|||+   .+++||||||+||++++++.+||
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEE
Confidence            999999999999999985422        2346788999999999999999995   89999999999999999999999


Q ss_pred             eeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHH
Q 047215          656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKW  734 (851)
Q Consensus       656 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~  734 (851)
                      +|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..|+.......   ..+.    
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~---~~~~----  233 (277)
T cd05062         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ---VLRF----  233 (277)
T ss_pred             CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHH----
Confidence            99999875433222211222345778999999998999999999999999999999 677775432211   1111    


Q ss_pred             hhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          735 QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       735 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      ......         ...+..++..+.+++.+||+.+|++|||+.|++++|+
T Consensus       234 ~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         234 VMEGGL---------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             HHcCCc---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            111110         1123345667999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=1e-36  Score=330.48  Aligned_cols=260  Identities=27%  Similarity=0.422  Sum_probs=209.5

Q ss_pred             cCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .+|...+.||+|+||.||+|...      +...+++|..........+.+.+|++++++++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            45777889999999999999743      345688898877666666789999999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCC--------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe
Q 047215          587 VYEYMANGTLRSHLFGSD--------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV  652 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~  652 (851)
                      ||||+++++|.+++....              ...+++.++++++.|++.||.|||+   ++++||||||+|||++.++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCc
Confidence            999999999999985432              2348899999999999999999994   89999999999999999999


Q ss_pred             EEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHH
Q 047215          653 AKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWA  731 (851)
Q Consensus       653 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~  731 (851)
                      +||+|||+++...............++..|+|||.+.+..++.++|||||||++|||+| |+.|+......+   ..+  
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~--  236 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---VIE--  236 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH--
Confidence            99999999976433222222233456788999999999999999999999999999998 888876543221   111  


Q ss_pred             HHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          732 MKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       732 ~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                       . ...+..         ...+..++..+.+++.+||+.+|++|||++++++.|+.+...
T Consensus       237 -~-~~~~~~---------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         237 -C-ITQGRV---------LERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             -H-HhCCCC---------CCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence             1 111111         111223456789999999999999999999999999987553

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=2.2e-37  Score=343.19  Aligned_cols=245  Identities=21%  Similarity=0.314  Sum_probs=201.7

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC--cceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED--CTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~--~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      ++|+..+.||+|+||.||+|...+  +..+|+|++...   .......+.+|+.+++.++||||+++++++..++..++|
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv  109 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV  109 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence            568889999999999999998654  357899987542   233456788999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+++|+|.+++...  ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus       110 ~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~  184 (340)
T PTZ00426        110 LEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR  184 (340)
T ss_pred             EeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence            9999999999998544  358899999999999999999995   89999999999999999999999999998764221


Q ss_pred             CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                           .....||+.|+|||++.+..++.++|||||||++|||++|+.||....+..   .   ...         +....
T Consensus       185 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~---~~~---------i~~~~  244 (340)
T PTZ00426        185 -----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL---I---YQK---------ILEGI  244 (340)
T ss_pred             -----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH---H---HHH---------HhcCC
Confidence                 234579999999999999899999999999999999999999997543211   0   001         11110


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                        ..++...+..+.+++.+||+.||++|+     +++++++|
T Consensus       245 --~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        245 --IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             --CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence              012333445688999999999999995     89999999

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=5.8e-37  Score=332.42  Aligned_cols=263  Identities=25%  Similarity=0.465  Sum_probs=209.7

Q ss_pred             HHHHhcCCceeeeeeeecceEEEEEEEcC------cceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEc
Q 047215          508 IRVATNNFDESLMIGVGGFGKVFKGEIED------CTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCD  579 (851)
Q Consensus       508 l~~~t~~f~~~~~LG~G~fG~Vykg~~~~------~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~  579 (851)
                      +....++|+..+.||+|+||.||++...+      ...+++|..... .......+.+|+.+++++ +||||+++++++.
T Consensus         7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   86 (293)
T cd05053           7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT   86 (293)
T ss_pred             cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence            33455678889999999999999998643      357889987754 334456789999999999 8999999999999


Q ss_pred             cCCcEEEEEEecCCcchhhhccCC--------------CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCe
Q 047215          580 EQNEMILVYEYMANGTLRSHLFGS--------------DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNI  645 (851)
Q Consensus       580 ~~~~~~lV~Ey~~~gsL~~~L~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NI  645 (851)
                      .++..+++|||+++|+|.+++...              ....+++..+++++.|++.||.|||+   .+|+||||||+||
T Consensus        87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Ni  163 (293)
T cd05053          87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNV  163 (293)
T ss_pred             CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeE
Confidence            999999999999999999998532              23568899999999999999999994   8999999999999


Q ss_pred             EEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcch
Q 047215          646 LLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQ  724 (851)
Q Consensus       646 Lld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~  724 (851)
                      |+++++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..|+......+ 
T Consensus       164 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-  242 (293)
T cd05053         164 LVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE-  242 (293)
T ss_pred             EEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH-
Confidence            999999999999999986443222222233345678999999988999999999999999999998 877775432211 


Q ss_pred             hcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          725 INLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       725 ~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                        +.   .. ..         .......+..++..+.+|+.+||+.+|.+|||+.|++++|+.++
T Consensus       243 --~~---~~-~~---------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         243 --LF---KL-LK---------EGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             --HH---HH-HH---------cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence              11   00 00         11111233455677999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.3e-36  Score=331.62  Aligned_cols=269  Identities=21%  Similarity=0.295  Sum_probs=202.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh-hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE-QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .++|+..+.||+|+||.||+|+.. +++.+|+|++..... .....+.+|+.++++++||||+++++++..+...++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            468999999999999999999875 577899998865432 233467889999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |++ ++|.+++.... ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++...... 
T Consensus        84 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-  157 (303)
T cd07869          84 YVH-TDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-  157 (303)
T ss_pred             CCC-cCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC-
Confidence            996 57777775432 458889999999999999999995   899999999999999999999999999987532211 


Q ss_pred             cccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcc---c---cc
Q 047215          670 THVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS---L---KS  742 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~---~---~~  742 (851)
                       .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........  ..+..........   .   ..
T Consensus       158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  234 (303)
T cd07869         158 -HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQD--QLERIFLVLGTPNEDTWPGVHS  234 (303)
T ss_pred             -ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH--HHHHHHHHhCCCChhhccchhh
Confidence             12234568999999999865 4689999999999999999999999975432111  1111100000000   0   00


Q ss_pred             --ccCc-cCCCCCC---------hhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          743 --IIDP-HLKGNYS---------PESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       743 --i~d~-~l~~~~~---------~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                        ..++ ......+         ...+..+.+++.+||+.||++|||++|+++|         +|+..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h---------~~f~~  293 (303)
T cd07869         235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH---------EYFSD  293 (303)
T ss_pred             ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC---------ccccc
Confidence              0000 0000000         0123567899999999999999999999999         88764

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=1.2e-36  Score=327.96  Aligned_cols=262  Identities=22%  Similarity=0.359  Sum_probs=204.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-Ccc----eeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCT----LAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~----~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      ++|+..+.||+|+||.||+|.+. ++.    .+++|...... .....++..|+.++++++||||+++++++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence            45677789999999999999863 333    36778775443 3345678889999999999999999999864 45789


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ++||+++|+|.+++.... ..+++..+..++.|++.||.|||+   .+++||||||+|||+++++.+||+|||+++....
T Consensus        86 i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~  161 (279)
T cd05111          86 VTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLLYP  161 (279)
T ss_pred             EEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence            999999999999996543 468999999999999999999995   8899999999999999999999999999986433


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ...........++..|+|||.+.+..++.++|||||||++|||++ |+.|+....+..   ..+.    ...+.  ..  
T Consensus       162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~~~~----~~~~~--~~--  230 (279)
T cd05111         162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE---VPDL----LEKGE--RL--  230 (279)
T ss_pred             CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHH----HHCCC--cC--
Confidence            222222334557789999999998899999999999999999998 888886543221   1111    11110  11  


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhh
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAW  795 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w  795 (851)
                           ..+..+...+.+++.+||..+|.+|||+.|+++.|..+.+-...|
T Consensus       231 -----~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~~~~  275 (279)
T cd05111         231 -----AQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDPPRY  275 (279)
T ss_pred             -----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCCcce
Confidence                 112234456789999999999999999999999988876654444

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=3.3e-37  Score=339.62  Aligned_cols=242  Identities=26%  Similarity=0.333  Sum_probs=198.1

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCc
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANG  594 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~g  594 (851)
                      +.||+|+||.||+++.. ++..+|+|.+...   .......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            36999999999999864 6788999987653   2344567788999999999999999999999999999999999999


Q ss_pred             chhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccccc
Q 047215          595 TLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST  674 (851)
Q Consensus       595 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~  674 (851)
                      +|..++...  ..+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++......  ....
T Consensus        81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~~  153 (323)
T cd05595          81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATMK  153 (323)
T ss_pred             cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC--Cccc
Confidence            999888543  368899999999999999999995   899999999999999999999999999987532211  1223


Q ss_pred             ccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCCh
Q 047215          675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSP  754 (851)
Q Consensus       675 ~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~  754 (851)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||........   .   ..         +....  ..++.
T Consensus       154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~---~---~~---------~~~~~--~~~p~  216 (323)
T cd05595         154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---F---EL---------ILMEE--IRFPR  216 (323)
T ss_pred             cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH---H---HH---------HhcCC--CCCCC
Confidence            45699999999999999999999999999999999999999865432211   0   00         00000  11233


Q ss_pred             hHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          755 ESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       755 ~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                      ..++.+.+++.+||+.||.+||     ++.++++|
T Consensus       217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         217 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence            4556789999999999999998     89999999

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=1.1e-36  Score=328.52  Aligned_cols=255  Identities=24%  Similarity=0.429  Sum_probs=203.6

Q ss_pred             cCCceeeeeeeecceEEEEEEE-----cCcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-----EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-----~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      ++|+..+.||+|+||.||+|..     ..+..+++|.+... ..+....+.+|++++++++||||+++++++..++..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            4577788999999999999984     24567899988754 34445789999999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCC---------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC
Q 047215          587 VYEYMANGTLRSHLFGSD---------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF  651 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~---------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~  651 (851)
                      ||||+++++|.+++....               ...+++.+++.++.|++.||.|||+   ++++||||||+|||+++++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~  161 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQL  161 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCC
Confidence            999999999999884321               2347888999999999999999995   8999999999999999999


Q ss_pred             eEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHH
Q 047215          652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADW  730 (851)
Q Consensus       652 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~  730 (851)
                      .+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..|+....+..   ..+ 
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~---~~~-  237 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE---VIE-  237 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHH-
Confidence            999999999976433222222333446778999999988899999999999999999998 887776543211   111 


Q ss_pred             HHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          731 AMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       731 ~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                         ......         ....+..++..+.+++.+||+.+|.+||++.+++++|.
T Consensus       238 ---~~~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  281 (283)
T cd05090         238 ---MVRKRQ---------LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR  281 (283)
T ss_pred             ---HHHcCC---------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence               111111         11123345677999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=1.3e-36  Score=323.06  Aligned_cols=251  Identities=27%  Similarity=0.409  Sum_probs=201.9

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecC
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      ++|+..+.||+|+||.||+++++++..+++|.+.... .....|.+|+.++++++||||+++++++..++..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            4577888999999999999998888789999876432 334678899999999999999999999999999999999999


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccc
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~  672 (851)
                      +|+|.+++.... ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++....... ..
T Consensus        83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~-~~  157 (256)
T cd05114          83 NGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY-TS  157 (256)
T ss_pred             CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCce-ec
Confidence            999999986543 358899999999999999999994   8999999999999999999999999999875432211 11


Q ss_pred             ccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      .....++..|+|||++.+..++.++||||||+++|||++ |+.|+......+   .   .......   ....       
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~---~---~~~i~~~---~~~~-------  221 (256)
T cd05114         158 SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE---V---VEMISRG---FRLY-------  221 (256)
T ss_pred             cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH---H---HHHHHCC---CCCC-------
Confidence            122335678999999998899999999999999999999 888876443211   1   1111111   0111       


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                      .+...+..+.+++.+||+.+|.+||+++++++.|
T Consensus       222 ~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         222 RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            1222345689999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-37  Score=323.20  Aligned_cols=267  Identities=24%  Similarity=0.323  Sum_probs=209.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCC--CChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc-----CCc
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANP--QSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE-----QNE  583 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~-----~~~  583 (851)
                      ...|...+.||+|+||.|+++.. .++..||||++..  ...-..+.-.+|+++|+.++|+||+.+++.+..     -+.
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D  100 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND  100 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence            34555567899999999999985 4678999999883  355566778899999999999999999998854     467


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .|+|+|+|+ -+|...++..  +.|+...+..+..|+++||.|+||   .+|+||||||+|+|++.+..+||+||||||.
T Consensus       101 vYiV~elMe-tDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DFGLAR~  174 (359)
T KOG0660|consen  101 VYLVFELME-TDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDFGLARY  174 (359)
T ss_pred             eEEehhHHh-hHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccccceee
Confidence            899999995 4999998544  358999999999999999999996   8999999999999999999999999999998


Q ss_pred             CCCCCccccccccccCCcccCccccc-ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      ..........+....|..|.|||.+. ...|+...||||.||++.||++|++.|.+...-.|..+............+..
T Consensus       175 ~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~  254 (359)
T KOG0660|consen  175 LDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQK  254 (359)
T ss_pred             ccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHH
Confidence            64432333445667899999999875 56899999999999999999999999988776666554432221111111111


Q ss_pred             cc--------C--ccCC----CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          743 II--------D--PHLK----GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       743 i~--------d--~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +-        .  |...    ...-+...+...+|+.+||..||.+|+|++|+|+|
T Consensus       255 i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h  310 (359)
T KOG0660|consen  255 IRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH  310 (359)
T ss_pred             hccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            11        0  0000    01113455678899999999999999999999999

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=1.6e-36  Score=323.73  Aligned_cols=255  Identities=23%  Similarity=0.362  Sum_probs=206.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .+|...+.||+|+||.||+|... .+..+++|..... .....++.+|++++++++||||++++++|..++..+++|||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            45777889999999999999865 4678899987654 334567899999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++++|.+++.......+++..++.++.|+++||+|||+   .+++||||||+||++++++.+||+|||+++........ 
T Consensus        85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~-  160 (263)
T cd05052          85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-  160 (263)
T ss_pred             CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccceee-
Confidence            99999999976555678999999999999999999995   89999999999999999999999999998764332111 


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      ......++..|+|||.+.+..++.++|||||||++|||++ |..|+......      +.....          ......
T Consensus       161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~------~~~~~~----------~~~~~~  224 (263)
T cd05052         161 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELL----------EKGYRM  224 (263)
T ss_pred             ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHH----------HCCCCC
Confidence            1112234668999999999999999999999999999998 88787543221      111111          111122


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      ..+..++..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       225 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         225 ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            33445667799999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.7e-37  Score=322.50  Aligned_cols=248  Identities=25%  Similarity=0.367  Sum_probs=210.2

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      .+|++.+.||+|.||.|-+|+- ..+..||||.+++.   ++++.-.+++||++|+.|+||||++++.+|+..+...|||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            4677778899999999999974 77899999987654   5667778999999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||..+|.|.+++  ...+.|++.+...+++||..|++|+|   +++++|||||.+|||||.|+++||+||||+....   
T Consensus       133 EYaS~GeLYDYi--Ser~~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~---  204 (668)
T KOG0611|consen  133 EYASGGELYDYI--SERGSLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA---  204 (668)
T ss_pred             EecCCccHHHHH--HHhccccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhc---
Confidence            999999999999  44567999999999999999999999   6999999999999999999999999999987632   


Q ss_pred             ccccccccccCCcccCcccccccCC-CchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                      .....+++||++.|.+||++.+.+| .+.+|-|||||+||.|+.|..||++..-.      ..+++..         ...
T Consensus       205 ~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk------~lvrQIs---------~Ga  269 (668)
T KOG0611|consen  205 DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK------RLVRQIS---------RGA  269 (668)
T ss_pred             cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH------HHHHHhh---------ccc
Confidence            2334577899999999999999988 47899999999999999999999765321      1122211         111


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      +   ..++.+....-|+++||..+|++|.|+++|..|-|
T Consensus       270 Y---rEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWW  305 (668)
T KOG0611|consen  270 Y---REPETPSDASGLIRWMLMVNPERRATIEDIASHWW  305 (668)
T ss_pred             c---cCCCCCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence            1   12344556788999999999999999999999943

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=3.9e-37  Score=339.72  Aligned_cols=242  Identities=24%  Similarity=0.318  Sum_probs=198.4

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCc
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANG  594 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~g  594 (851)
                      +.||+|+||.||+++.. ++..+|+|++...   .......+.+|+++++.++||||+++++++..++..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            36999999999999864 5788999988653   2344567889999999999999999999999999999999999999


Q ss_pred             chhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccccc
Q 047215          595 TLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST  674 (851)
Q Consensus       595 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~  674 (851)
                      +|.+++...  ..+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++.....  .....
T Consensus        81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~--~~~~~  153 (328)
T cd05593          81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD--AATMK  153 (328)
T ss_pred             CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCc--ccccc
Confidence            999888543  468899999999999999999995   89999999999999999999999999998753221  11223


Q ss_pred             ccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCCh
Q 047215          675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSP  754 (851)
Q Consensus       675 ~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~  754 (851)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||........      ..... .      .+.    .++.
T Consensus       154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~------~~~~~-~------~~~----~~p~  216 (328)
T cd05593         154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL------FELIL-M------EDI----KFPR  216 (328)
T ss_pred             cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH------HHHhc-c------CCc----cCCC
Confidence            45799999999999999999999999999999999999999865432111      11000 0      011    2233


Q ss_pred             hHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          755 ESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       755 ~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                      ..+..+.+++.+||+.||.+||     ++.|+++|
T Consensus       217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         217 TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            4556789999999999999997     89999998

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-37  Score=336.99  Aligned_cols=263  Identities=22%  Similarity=0.390  Sum_probs=222.8

Q ss_pred             HHHHHHhcCCceeeeeeeecceEEEEEEEcCcc-eeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcE
Q 047215          506 AEIRVATNNFDESLMIGVGGFGKVFKGEIEDCT-LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       506 ~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~~-~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~  584 (851)
                      ++++...-+.....+||-|.||.||.|.|+.-. -||||.++. +....++|..|..+|+.++|||+|+|+|+|.....+
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE-DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF  338 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF  338 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhh-cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence            345555566667789999999999999987643 578888774 455689999999999999999999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      |||.|||..|+|.++|+..++..++...++.++.||+.||.||.   ++++|||||.++|+|+.++..+|++||||+|++
T Consensus       339 YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlM  415 (1157)
T KOG4278|consen  339 YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLM  415 (1157)
T ss_pred             EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence            99999999999999999888888888999999999999999999   699999999999999999999999999999986


Q ss_pred             CCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          665 PSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       665 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      .....+ ......-+..|.|||.+....++.|+|||+|||+|||+.| |..|+.+..      +.          .+-.+
T Consensus       416 tgDTYT-AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid------lS----------qVY~L  478 (1157)
T KOG4278|consen  416 TGDTYT-AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID------LS----------QVYGL  478 (1157)
T ss_pred             cCCcee-cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc------HH----------HHHHH
Confidence            554333 2233445778999999999999999999999999999988 444554321      11          12233


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                      +...++.+.++.|++.+.+|+++||+.+|.+||++.|+-+.+|.+.
T Consensus       479 LEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf  524 (1157)
T KOG4278|consen  479 LEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF  524 (1157)
T ss_pred             HhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence            4455666778999999999999999999999999999999988775

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=2.2e-36  Score=327.60  Aligned_cols=257  Identities=28%  Similarity=0.435  Sum_probs=204.2

Q ss_pred             CCceeeeeeeecceEEEEEEEc------CcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      +|+..+.||+|+||.||+|...      ....+++|.+.... ......+.+|+.++++++||||+++++.|..++..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            4667788999999999999753      22467888876543 3445678999999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCC----------------------CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCC
Q 047215          587 VYEYMANGTLRSHLFGS----------------------DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTN  644 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~----------------------~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~N  644 (851)
                      ++||+++|+|.+++...                      ...++++.+++.++.|++.||+|||+   .+++||||||+|
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~n  157 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARN  157 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhhe
Confidence            99999999999987532                      12357899999999999999999994   899999999999


Q ss_pred             eEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcc
Q 047215          645 ILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKD  723 (851)
Q Consensus       645 ILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~  723 (851)
                      ||+++++.+||+|||+++...............++..|+|||++.+..++.++||||||++++||++ |+.|+....+..
T Consensus       158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  237 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER  237 (290)
T ss_pred             EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            9999999999999999875433222111233446778999999988899999999999999999999 888886543221


Q ss_pred             hhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          724 QINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       724 ~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                         +.++    ..         .......+..++..+.+++.+||+.+|.+||++.++++.|+.+.
T Consensus       238 ---~~~~----~~---------~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~  287 (290)
T cd05045         238 ---LFNL----LK---------TGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM  287 (290)
T ss_pred             ---HHHH----Hh---------CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence               1111    11         11111223445567999999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=1e-36  Score=327.95  Aligned_cols=255  Identities=27%  Similarity=0.455  Sum_probs=205.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC------cceeEEeecCCCChh-hHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED------CTLAAIKRANPQSEQ-GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~------~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      ++|...+.||+|+||.||+|+..+      +..+++|.+...... ....+.+|++++++++||||+++++++..+...+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            457777899999999999998643      367899988765444 5678999999999999999999999999999999


Q ss_pred             EEEEecCCcchhhhccCCC------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeE
Q 047215          586 LVYEYMANGTLRSHLFGSD------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA  653 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~  653 (851)
                      +||||+++++|.+++....            ...+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~  161 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLVV  161 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCeE
Confidence            9999999999999986432            2457899999999999999999994   899999999999999999999


Q ss_pred             EEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHH
Q 047215          654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAM  732 (851)
Q Consensus       654 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~  732 (851)
                      ||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||......+   ..+.. 
T Consensus       162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~---~~~~~-  237 (280)
T cd05049         162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE---VIECI-  237 (280)
T ss_pred             EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHH-
Confidence            9999999875432222222233346788999999999999999999999999999998 988876543221   11111 


Q ss_pred             HHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       733 ~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                         ..+..         ...+...+..+.+++.+||+.||.+||++.|+++.|+
T Consensus       238 ---~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         238 ---TQGRL---------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             ---HcCCc---------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence               11110         1122345567899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-36  Score=328.44  Aligned_cols=252  Identities=25%  Similarity=0.356  Sum_probs=204.0

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      +|+..++||+|+||.||++... ++..+|+|++....   ......+.+|+.++++++||||+++++++..++..++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            4778899999999999999864 57889999886532   2223457789999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++|+|.+++.......+++.++..++.|++.||.|||+   .+++||||||+||++++++.++|+|||+++...... 
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-  156 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE-  156 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence            9999999998865544568999999999999999999995   899999999999999999999999999987643211 


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                        ......|++.|+|||++.+..++.++|||||||++|||++|+.||.........   +.....        +.  ...
T Consensus       157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~---~~~~~~--------~~--~~~  221 (285)
T cd05605         157 --TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR---EEVERR--------VK--EDQ  221 (285)
T ss_pred             --ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH---HHHHHH--------hh--hcc
Confidence              123346899999999999889999999999999999999999999754322111   001100        00  011


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                      ..++...+..+.+++.+||+.||.+||     +++++++|
T Consensus       222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         222 EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence            123344556789999999999999999     89999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.8e-37  Score=337.48  Aligned_cols=240  Identities=22%  Similarity=0.259  Sum_probs=197.0

Q ss_pred             eeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcch
Q 047215          521 IGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL  596 (851)
Q Consensus       521 LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL  596 (851)
                      ||+|+||.||+++.. ++..+|+|++...   .......+.+|+.++++++||||+++++++..++..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            699999999999875 4678899987643   334456788999999999999999999999999999999999999999


Q ss_pred             hhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccccccc
Q 047215          597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV  676 (851)
Q Consensus       597 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~  676 (851)
                      .+++...  ..+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....  .......
T Consensus        81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~~~~~  153 (312)
T cd05585          81 FHHLQRE--GRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD--DDKTNTF  153 (312)
T ss_pred             HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccC--CCccccc
Confidence            9998553  458899999999999999999995   89999999999999999999999999998753221  1223446


Q ss_pred             ccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhH
Q 047215          677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPES  756 (851)
Q Consensus       677 ~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  756 (851)
                      .||+.|+|||++.+..++.++|||||||++|||++|+.||......      +.......         .  ...++...
T Consensus       154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~------~~~~~~~~---------~--~~~~~~~~  216 (312)
T cd05585         154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN------EMYRKILQ---------E--PLRFPDGF  216 (312)
T ss_pred             cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH------HHHHHHHc---------C--CCCCCCcC
Confidence            7999999999999999999999999999999999999998754221      11111111         0  11233445


Q ss_pred             HHHHHHHHHHhcccCCCCCC---CHHHHHHH
Q 047215          757 LEKFGEIAEKCLDDEGKNRP---TMGEVLWH  784 (851)
Q Consensus       757 ~~~l~~l~~~Cl~~dP~~RP---t~~evl~~  784 (851)
                      +..+.+++.+||+.||.+||   ++.|++.|
T Consensus       217 ~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h  247 (312)
T cd05585         217 DRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH  247 (312)
T ss_pred             CHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence            56789999999999999997   57888888

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=1.1e-36  Score=339.67  Aligned_cols=252  Identities=23%  Similarity=0.339  Sum_probs=197.3

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      +|+..++||+|+||.||+|+.. +++.+|||++... .......+.+|++++++++|+||+++++++..++..++||||+
T Consensus        75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  154 (353)
T PLN00034         75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM  154 (353)
T ss_pred             HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence            3445678999999999999865 5788999988654 3344567899999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++|+|.+..      ...+..+..++.|++.||.|||+   .+|+||||||+|||+++++.+||+|||+++......  .
T Consensus       155 ~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~--~  223 (353)
T PLN00034        155 DGGSLEGTH------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM--D  223 (353)
T ss_pred             CCCcccccc------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceeccccc--c
Confidence            999986543      34567788999999999999995   899999999999999999999999999987643211  1


Q ss_pred             cccccccCCcccCcccccc-----cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          672 VSTAVKGSFGYLDPEYFWR-----QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~-----~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      ......||..|+|||++..     ...+.++|||||||++|||++|+.||......+      |........ .      
T Consensus       224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~------~~~~~~~~~-~------  290 (353)
T PLN00034        224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD------WASLMCAIC-M------  290 (353)
T ss_pred             cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc------HHHHHHHHh-c------
Confidence            1234568999999998843     334568999999999999999999987332211      111110000 0      


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      ......+..++..+.+|+.+||+.||++|||+.|+++|         +|+..
T Consensus       291 ~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h---------p~~~~  333 (353)
T PLN00034        291 SQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH---------PFILR  333 (353)
T ss_pred             cCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC---------ccccc
Confidence            00111233455679999999999999999999999999         88764

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=2.3e-36  Score=328.78  Aligned_cols=260  Identities=28%  Similarity=0.424  Sum_probs=205.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCc-c--eeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDC-T--LAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~-~--~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      ++|+..++||+|+||.||+|..++. .  .+++|.+... .....+.+.+|++++.++ +||||+++++++...+..++|
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            5688889999999999999987543 2  3677777643 344567789999999999 799999999999999999999


Q ss_pred             EEecCCcchhhhccCCC--------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeE
Q 047215          588 YEYMANGTLRSHLFGSD--------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA  653 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~  653 (851)
                      +||+++|+|.+++....              ...+++.++..++.|++.||+|||+   .+++||||||+|||+++++.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeE
Confidence            99999999999985432              1358889999999999999999994   899999999999999999999


Q ss_pred             EEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHH
Q 047215          654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAM  732 (851)
Q Consensus       654 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~  732 (851)
                      ||+|||++......   ........+..|+|||++.+..++.++|||||||++|||++ |+.||......+      ...
T Consensus       159 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~------~~~  229 (297)
T cd05089         159 KIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE------LYE  229 (297)
T ss_pred             EECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH------HHH
Confidence            99999998642211   01111223567999999998899999999999999999997 888886543221      111


Q ss_pred             HHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhh
Q 047215          733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEA  794 (851)
Q Consensus       733 ~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~  794 (851)
                      ..          ........+..++..+.+|+.+||+.+|.+|||++++++.|+.+.+..++
T Consensus       230 ~~----------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~  281 (297)
T cd05089         230 KL----------PQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA  281 (297)
T ss_pred             HH----------hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence            11          01111122334556789999999999999999999999999988765544

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-37  Score=350.14  Aligned_cols=262  Identities=22%  Similarity=0.299  Sum_probs=217.1

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCc-ceeEEeecCCCChhhHHHHHHHHHHHHhcC-CcceeeEEEE-Ec-----c-C
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDC-TLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGF-CD-----E-Q  581 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~-~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~-~~-----~-~  581 (851)
                      ...++.+.+.|.+|||+.||.++...+ ..+|+|++...++...+...+||++|++|+ |||||.+++. ..     . .
T Consensus        35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~  114 (738)
T KOG1989|consen   35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV  114 (738)
T ss_pred             CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence            456778889999999999999998766 899999988889999999999999999996 9999999993 21     1 2


Q ss_pred             CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccc
Q 047215          582 NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla  661 (851)
                      -+.+|.||||.+|.|-|++..+....|++.++++|+.|+++|+.+||. ++.+|||||||-+||||+.++..||||||.+
T Consensus       115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSa  193 (738)
T KOG1989|consen  115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSA  193 (738)
T ss_pred             eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence            478999999999999999976555569999999999999999999996 5678999999999999999999999999998


Q ss_pred             ccCCCCC--cccc-----ccccccCCcccCccccc---ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHH
Q 047215          662 KTGPSME--HTHV-----STAVKGSFGYLDPEYFW---RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA  731 (851)
Q Consensus       662 ~~~~~~~--~~~~-----~~~~~gt~~y~aPE~~~---~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~  731 (851)
                      ......-  ...+     .-...-|+.|.+||++.   +...++|+|||+|||+||-|+....||.....          
T Consensus       194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~----------  263 (738)
T KOG1989|consen  194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK----------  263 (738)
T ss_pred             ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----------
Confidence            7532211  1110     01223689999999984   77899999999999999999999999975422          


Q ss_pred             HHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhh
Q 047215          732 MKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH  792 (851)
Q Consensus       732 ~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  792 (851)
                               ..|+...+.-.-.+..+..+++||..||+.||.+||++-||+.++..+...+
T Consensus       264 ---------laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~  315 (738)
T KOG1989|consen  264 ---------LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP  315 (738)
T ss_pred             ---------eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence                     2344444433333577889999999999999999999999999988776543

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=2.4e-36  Score=324.99  Aligned_cols=257  Identities=26%  Similarity=0.360  Sum_probs=202.4

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcC------cceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCc
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIED------CTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE  583 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~------~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~  583 (851)
                      .+++|...+.||+|+||.||+|...+      ...+++|...... ......|..|+.++++++|+||+++++++.+.+.
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            34678889999999999999998754      4567888776443 3445679999999999999999999999999999


Q ss_pred             EEEEEEecCCcchhhhccCCC-----CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC---eEEE
Q 047215          584 MILVYEYMANGTLRSHLFGSD-----LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF---VAKM  655 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~-----~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~---~~kl  655 (851)
                      .++||||+++++|.+++....     ...+++.++++++.|++.||+|||+   .+++||||||+|||++.++   .+||
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl  160 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKI  160 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEe
Confidence            999999999999999985532     1358999999999999999999995   8999999999999998654   6999


Q ss_pred             eeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHH
Q 047215          656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKW  734 (851)
Q Consensus       656 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~  734 (851)
                      +|||+++................+..|+|||++.+..++.++|||||||++|||++ |+.||......+   +.   ...
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~---~~---~~~  234 (277)
T cd05036         161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE---VM---EFV  234 (277)
T ss_pred             ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HH---HHH
Confidence            99999986432211111112233568999999998999999999999999999997 888876543221   11   111


Q ss_pred             hhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          735 QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       735 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      .          .......+..++..+.+++.+||+.+|++||++.+|++||.
T Consensus       235 ~----------~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         235 T----------GGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             H----------cCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            0          01111233455677999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=7.7e-37  Score=336.71  Aligned_cols=242  Identities=26%  Similarity=0.368  Sum_probs=196.9

Q ss_pred             eeeeeecceEEEEEEE----cCcceeEEeecCCC----ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          519 LMIGVGGFGKVFKGEI----EDCTLAAIKRANPQ----SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~----~~~~~vavK~~~~~----~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++||+|+||.||+++.    ..++.+|+|.+...    .......+..|+.+|++++||||+++++++..++..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5799999999999975    35678999987642    223345678899999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++|+|.+++...  ..+.+..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.....  .
T Consensus        82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~  154 (323)
T cd05584          82 LSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE--G  154 (323)
T ss_pred             CCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC--C
Confidence            9999999998543  357788889999999999999995   89999999999999999999999999998743221  1


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......      ....         +....  .
T Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~------~~~~---------~~~~~--~  217 (323)
T cd05584         155 TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK------TIDK---------ILKGK--L  217 (323)
T ss_pred             CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH------HHHH---------HHcCC--C
Confidence            12234579999999999999899999999999999999999999987543211      1111         11111  1


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                      ..++..+..+.+++.+||+.+|++||     +++++++|
T Consensus       218 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h  256 (323)
T cd05584         218 NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH  256 (323)
T ss_pred             CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence            23344556789999999999999999     89999998

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=1.5e-36  Score=335.60  Aligned_cols=252  Identities=24%  Similarity=0.342  Sum_probs=200.4

Q ss_pred             CCceeeeeeeecceEEEEEEE----cCcceeEEeecCCC----ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcE
Q 047215          514 NFDESLMIGVGGFGKVFKGEI----EDCTLAAIKRANPQ----SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~----~~~~~vavK~~~~~----~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~  584 (851)
                      +|+..+.||+|+||.||+++.    ..+..+|+|++...    .....+.+..|+.+++++ +||||+++++++..++..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            478889999999999999875    35678999987642    223345688899999999 599999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ++||||+++|+|.+++...  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus        81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~  155 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEF  155 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence            9999999999999998543  358899999999999999999995   89999999999999999999999999998753


Q ss_pred             CCCCccccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          665 PSMEHTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       665 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      ..... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.........  .........       
T Consensus       156 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~--~~~~~~~~~-------  225 (332)
T cd05614         156 LSEEK-ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQ--SEVSRRILK-------  225 (332)
T ss_pred             cccCC-CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCH--HHHHHHHhc-------
Confidence            32211 122345799999999999865 4789999999999999999999998654322111  111111100       


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                      .++    .++...+..+.+++.+||+.||++||     +++++++|
T Consensus       226 ~~~----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         226 CDP----PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             CCC----CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence            112    22334556689999999999999999     88899999

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=2.6e-36  Score=325.83  Aligned_cols=265  Identities=25%  Similarity=0.421  Sum_probs=204.0

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-----CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc--CCcEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-----DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMI  585 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-----~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~--~~~~~  585 (851)
                      ++|+..+.||+|+||.||++..+     .+..+++|++........+.+.+|++++++++||||+++++++..  ....+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            56788899999999999999753     467899999887777777889999999999999999999998743  35689


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      +|+||+++|+|.+++.... ..+++..+..++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++...
T Consensus        84 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~  159 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKVLP  159 (284)
T ss_pred             EEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence            9999999999999986443 458999999999999999999994   899999999999999999999999999998654


Q ss_pred             CCCccc-cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh-------
Q 047215          666 SMEHTH-VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ-------  737 (851)
Q Consensus       666 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~-------  737 (851)
                      ...... ......++..|+|||++.+..++.++|||||||+++||++|..++......       +.......       
T Consensus       160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~  232 (284)
T cd05081         160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-------FMRMMGNDKQGQMIV  232 (284)
T ss_pred             CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-------hhhhcccccccccch
Confidence            322111 111223445699999999889999999999999999999987654322110       00000000       


Q ss_pred             cccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          738 RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       738 ~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      ..+.+++........+..++..+.+++.+||+.+|++|||+.|+++.|+.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         233 YHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            000011111111122345567799999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.8e-37  Score=342.82  Aligned_cols=253  Identities=23%  Similarity=0.302  Sum_probs=204.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+|+.. +++.+|+|++...   .......+.+|++++..++||||+++++++..++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            46888999999999999999875 5788999988643   2244567889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~  155 (350)
T cd05573          81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK  155 (350)
T ss_pred             cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence            999999999999654  468899999999999999999995   999999999999999999999999999987543322


Q ss_pred             ---------------------------ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCC
Q 047215          669 ---------------------------HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP  721 (851)
Q Consensus       669 ---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~  721 (851)
                                                 .........||+.|+|||++.+..++.++|||||||+||||++|+.||.....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~  235 (350)
T cd05573         156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL  235 (350)
T ss_pred             cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence                                       00122345689999999999999999999999999999999999999876542


Q ss_pred             cchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCC-HHHHHHH
Q 047215          722 KDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT-MGEVLWH  784 (851)
Q Consensus       722 ~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~evl~~  784 (851)
                      ...      .......  .     ..+........++.+.+++.+||+ ||.+||+ ++++++|
T Consensus       236 ~~~------~~~i~~~--~-----~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         236 QET------YNKIINW--K-----ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             HHH------HHHHhcc--C-----CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            211      1111100  0     011111111245678999999998 9999999 9999999

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=3e-36  Score=324.57  Aligned_cols=261  Identities=23%  Similarity=0.380  Sum_probs=209.1

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcC-----cceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc-CCc
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIED-----CTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE-QNE  583 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~-----~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~-~~~  583 (851)
                      ..++|+..++||+|+||.||+|...+     +..+++|++... .......+.+|+.++++++||||+++++++.. +..
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            35678889999999999999999765     677889987654 44556778999999999999999999999865 577


Q ss_pred             EEEEEEecCCcchhhhccCCCC------CCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEee
Q 047215          584 MILVYEYMANGTLRSHLFGSDL------PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD  657 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~------~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~D  657 (851)
                      .++++||+++|+|.+++.....      ..+++.++..++.|++.||+|||   +.+++||||||+||++++++.+||+|
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d  160 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITD  160 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECC
Confidence            8999999999999999854322      46899999999999999999999   48999999999999999999999999


Q ss_pred             ccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhh
Q 047215          658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQK  736 (851)
Q Consensus       658 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~  736 (851)
                      ||+++...............++..|+|||++.+..++.++||||||+++||+++ |+.|+....+.   .+..+.   ..
T Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~~---~~  234 (280)
T cd05043         161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF---EMAAYL---KD  234 (280)
T ss_pred             CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH---HHHHHH---Hc
Confidence            999986433222222233446778999999998899999999999999999999 98888654322   111111   11


Q ss_pred             hcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       737 ~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      .          .....+..+++.+.+++.+||+.+|++|||+.++++.|+.+..
T Consensus       235 ~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         235 G----------YRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             C----------CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            0          0111123345678999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=2.9e-36  Score=320.64  Aligned_cols=252  Identities=29%  Similarity=0.415  Sum_probs=201.7

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecC
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      ++|...+.||+|+||.||+|+..++..+|+|.+.... .....|.+|+.++++++||||+++++++......++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            4577788999999999999998877779999877543 234678999999999999999999999999999999999999


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccc
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~  672 (851)
                      +|+|.+++.... ..+++.++++++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||+++....... ..
T Consensus        83 ~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-~~  157 (256)
T cd05113          83 NGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY-TS  157 (256)
T ss_pred             CCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCce-ee
Confidence            999999986543 268999999999999999999994   8999999999999999999999999999875432211 11


Q ss_pred             ccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      .....++..|++||++.+..++.++|||||||++|||++ |+.|+......+   ...   .... +.         ...
T Consensus       158 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~---~~~~-~~---------~~~  221 (256)
T cd05113         158 SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE---TVE---KVSQ-GL---------RLY  221 (256)
T ss_pred             cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHH---HHhc-CC---------CCC
Confidence            122335678999999998889999999999999999998 888876433211   111   1100 00         001


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      .+...+..+.+++.+||+.+|.+||++.+++++|+
T Consensus       222 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         222 RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            12223567899999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=1.3e-36  Score=335.65  Aligned_cols=249  Identities=23%  Similarity=0.368  Sum_probs=199.0

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      ++||+|+||.||+++.. ++..+|+|.+...   .......+..|+.++.++ +||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            36999999999999865 5678999988753   233456688999999998 799999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |+|.+++...  ..+++..+..++.|++.||.|||+   ++++||||||+|||++.++.+||+|||+++.....  ....
T Consensus        81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--~~~~  153 (329)
T cd05588          81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP--GDTT  153 (329)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccC--CCcc
Confidence            9999888543  468999999999999999999995   89999999999999999999999999998742211  1223


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcc--hhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD--QINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~--~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+  .....++........        ..  .
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--------~~--~  223 (329)
T cd05588         154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK--------QI--R  223 (329)
T ss_pred             ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--------CC--C
Confidence            34679999999999999999999999999999999999999996432211  111122222211111        11  1


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCC------HHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPT------MGEVLWH  784 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt------~~evl~~  784 (851)
                      .+...+..+.+++.+||+.||.+||+      ++++++|
T Consensus       224 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05588         224 IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH  262 (329)
T ss_pred             CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence            23345567899999999999999997      7899988

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=3.5e-36  Score=328.91  Aligned_cols=260  Identities=25%  Similarity=0.450  Sum_probs=206.3

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC--------cceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCC
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED--------CTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQN  582 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~--------~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~  582 (851)
                      ++|.+.+.||+|+||.||+++..+        ...+|+|.+... ......++..|+++++++ +||||++++++|...+
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   97 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            578889999999999999997532        246899988754 344556788999999999 7999999999999999


Q ss_pred             cEEEEEEecCCcchhhhccCCC--------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc
Q 047215          583 EMILVYEYMANGTLRSHLFGSD--------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD  648 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld  648 (851)
                      ..++||||+++|+|.+++....              ...+++.++++++.|++.||+|||+   .+++||||||+|||++
T Consensus        98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~  174 (307)
T cd05098          98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVT  174 (307)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheEEc
Confidence            9999999999999999996532              1358899999999999999999994   8999999999999999


Q ss_pred             CCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcH
Q 047215          649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINL  727 (851)
Q Consensus       649 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l  727 (851)
                      .++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.|+.....      
T Consensus       175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~------  248 (307)
T cd05098         175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV------  248 (307)
T ss_pred             CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH------
Confidence            999999999999875432221111222334578999999998899999999999999999998 7777654321      


Q ss_pred             HHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          728 ADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       728 ~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      .+...... .         ......+..++..+.+++.+||+.+|.+|||+.+++++|+.+...
T Consensus       249 ~~~~~~~~-~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~  302 (307)
T cd05098         249 EELFKLLK-E---------GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL  302 (307)
T ss_pred             HHHHHHHH-c---------CCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence            11111111 0         111123345567899999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=3.7e-36  Score=323.87  Aligned_cols=263  Identities=22%  Similarity=0.329  Sum_probs=205.6

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-Ccc----eeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCT----LAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~----~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      .++|+..++||+|+||.||+|++. ++.    .+|+|..... ......++.+|+.+++.++||||++++++|... ..+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~   84 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ   84 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence            357888899999999999999853 333    3789987654 344456789999999999999999999999754 578


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      +++||+++|+|.++++... ..+++.+++.++.|++.||.|||+   .+++||||||+|||+++++.+||+|||+++...
T Consensus        85 l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~  160 (279)
T cd05109          85 LVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLD  160 (279)
T ss_pred             EEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence            9999999999999986543 468899999999999999999995   899999999999999999999999999998653


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      ............++..|+|||.+.+..++.++|||||||++|||++ |..|+......   .+..+..    ..      
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~~~----~~------  227 (279)
T cd05109         161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR---EIPDLLE----KG------  227 (279)
T ss_pred             cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHH----CC------
Confidence            3222111222335678999999999999999999999999999998 88887643221   1111111    10      


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhh
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAW  795 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w  795 (851)
                         .....+..++..+.+++.+||+.||.+||++.++++.|+.+.+...+|
T Consensus       228 ---~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~~~~  275 (279)
T cd05109         228 ---ERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDPSRF  275 (279)
T ss_pred             ---CcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCCcCe
Confidence               011122345567899999999999999999999999988776554443

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=3.9e-36  Score=327.85  Aligned_cols=260  Identities=23%  Similarity=0.388  Sum_probs=206.2

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCCC-hhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCC
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQS-EQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQN  582 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~  582 (851)
                      ..++|...+.||+|+||.||++...      .+..+|+|++.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus        33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  112 (302)
T cd05055          33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG  112 (302)
T ss_pred             cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence            3467888999999999999999742      23468899877543 34456789999999999 7999999999999999


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      ..++||||+++|+|.++++......+++.++..++.|++.||.|||+   ++++|+||||+|||++.++.+||+|||+++
T Consensus       113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~  189 (302)
T cd05055         113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLAR  189 (302)
T ss_pred             ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCcccc
Confidence            99999999999999999976544458999999999999999999995   899999999999999999999999999987


Q ss_pred             cCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccc
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLK  741 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  741 (851)
                      ...............++..|+|||.+.+..++.++|||||||++|||++ |+.|+......+.  ...    ...     
T Consensus       190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~--~~~----~~~-----  258 (302)
T cd05055         190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK--FYK----LIK-----  258 (302)
T ss_pred             cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH--HHH----HHH-----
Confidence            6433222112223346778999999999999999999999999999998 8888765432111  111    100     


Q ss_pred             cccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          742 SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       742 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                          .......+...+..+.+++.+||+.+|++|||+.|+++.|+.+
T Consensus       259 ----~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         259 ----EGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             ----cCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence                1111111223456799999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=1.6e-36  Score=351.75  Aligned_cols=257  Identities=23%  Similarity=0.308  Sum_probs=206.9

Q ss_pred             HHhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC----
Q 047215          510 VATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN----  582 (851)
Q Consensus       510 ~~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~----  582 (851)
                      ...++|.+.++||+|+||.||+|+. .+++.+|||++...  .......+.+|+..+..++|+|++++...+...+    
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            3457899999999999999999985 46789999987653  4455677889999999999999999988764332    


Q ss_pred             ----cEEEEEEecCCcchhhhccCC--CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEe
Q 047215          583 ----EMILVYEYMANGTLRSHLFGS--DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMS  656 (851)
Q Consensus       583 ----~~~lV~Ey~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~  656 (851)
                          .+++||||+++|+|.++|...  ....+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~vkL~  185 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLVKLG  185 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCEEEE
Confidence                368999999999999998543  23568899999999999999999995   899999999999999999999999


Q ss_pred             eccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh
Q 047215          657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK  736 (851)
Q Consensus       657 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~  736 (851)
                      |||+++...............||+.|+|||++.+..++.++|||||||+||||++|+.||......      +...... 
T Consensus       186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~------~~~~~~~-  258 (496)
T PTZ00283        186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME------EVMHKTL-  258 (496)
T ss_pred             ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHh-
Confidence            999997644322222334567999999999999999999999999999999999999998654221      1111111 


Q ss_pred             hcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       737 ~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                      .+    ..     ...++..++.+.+++.+||+.||.+||++.++++|.
T Consensus       259 ~~----~~-----~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p  298 (496)
T PTZ00283        259 AG----RY-----DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMP  298 (496)
T ss_pred             cC----CC-----CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCH
Confidence            00    01     123345567799999999999999999999999884

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=5e-37  Score=338.48  Aligned_cols=243  Identities=24%  Similarity=0.321  Sum_probs=197.4

Q ss_pred             eeeeeecceEEEEEEE-cCcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCc
Q 047215          519 LMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANG  594 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~g  594 (851)
                      +.||+|+||.||+++. ..+..+|+|.+...   .......+..|+++++.++||||+++.+++..++..++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            3699999999999986 46778999987653   2334567788999999999999999999999999999999999999


Q ss_pred             chhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccccc
Q 047215          595 TLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST  674 (851)
Q Consensus       595 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~  674 (851)
                      +|.+++...  ..+++.++..++.|++.||+|||+  ..+|+||||||+|||++.++.+||+|||+++.....  .....
T Consensus        81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~--~~~~~  154 (325)
T cd05594          81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMK  154 (325)
T ss_pred             cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC--Ccccc
Confidence            999888543  368899999999999999999995  479999999999999999999999999998753221  11223


Q ss_pred             ccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCCh
Q 047215          675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSP  754 (851)
Q Consensus       675 ~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~  754 (851)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||........   .   ... ...      ..    .++.
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~---~---~~i-~~~------~~----~~p~  217 (325)
T cd05594         155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---F---ELI-LME------EI----RFPR  217 (325)
T ss_pred             cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH---H---HHH-hcC------CC----CCCC
Confidence            45699999999999999999999999999999999999999865432211   0   000 000      01    1233


Q ss_pred             hHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          755 ESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       755 ~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                      ..+..+.+++.+||+.||++|+     ++.++++|
T Consensus       218 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         218 TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence            3456689999999999999996     89999999

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=2e-36  Score=339.00  Aligned_cols=254  Identities=21%  Similarity=0.325  Sum_probs=196.9

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||+||+++.. .++.+|+|++...   .......+..|+.++.+++||||+++++.+.++...+|||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            47888999999999999999864 5678999988653   2334467888999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus        81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~  155 (363)
T cd05628          81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH  155 (363)
T ss_pred             cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence            999999999998653  468999999999999999999995   899999999999999999999999999987532110


Q ss_pred             c---------------------------------cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcC
Q 047215          669 H---------------------------------THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV  715 (851)
Q Consensus       669 ~---------------------------------~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p  715 (851)
                      .                                 .......+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P  235 (363)
T cd05628         156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP  235 (363)
T ss_pred             cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence            0                                 0011245799999999999999999999999999999999999999


Q ss_pred             CCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcc--cCCCCCCCHHHHHHH
Q 047215          716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLD--DEGKNRPTMGEVLWH  784 (851)
Q Consensus       716 ~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~--~dP~~RPt~~evl~~  784 (851)
                      |....+.+.   .   ......  ...+..|.   .  ....+.+++++.+++.  .++..||+++|+++|
T Consensus       236 f~~~~~~~~---~---~~i~~~--~~~~~~p~---~--~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h  293 (363)
T cd05628         236 FCSETPQET---Y---KKVMNW--KETLIFPP---E--VPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN  293 (363)
T ss_pred             CCCCCHHHH---H---HHHHcC--cCcccCCC---c--CCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence            976543221   1   111000  00111111   0  1233456777776443  334457999999999

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=4.5e-36  Score=317.89  Aligned_cols=247  Identities=26%  Similarity=0.417  Sum_probs=196.2

Q ss_pred             eeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcchh
Q 047215          520 MIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR  597 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~  597 (851)
                      .||+|+||.||+|+.. +++.+++|..... .......+.+|++++++++||||++++++|......++||||+++++|.
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   81 (252)
T cd05084           2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL   81 (252)
T ss_pred             ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence            5999999999999874 6788999987654 3445567999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccc
Q 047215          598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK  677 (851)
Q Consensus       598 ~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~  677 (851)
                      +++.... ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++...............
T Consensus        82 ~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  157 (252)
T cd05084          82 TFLRTEG-PRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ  157 (252)
T ss_pred             HHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence            9985432 468899999999999999999994   899999999999999999999999999987533211111111122


Q ss_pred             cCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhH
Q 047215          678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPES  756 (851)
Q Consensus       678 gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  756 (851)
                      .+..|+|||.+.+..++.++||||||+++|||++ |..|+....+...       .....         .......+..+
T Consensus       158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~-------~~~~~---------~~~~~~~~~~~  221 (252)
T cd05084         158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT-------REAIE---------QGVRLPCPELC  221 (252)
T ss_pred             CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH-------HHHHH---------cCCCCCCcccC
Confidence            3457999999999999999999999999999998 7777654322110       01000         11111233445


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          757 LEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       757 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      +..+.+++.+||+.+|++|||+.++++.|.
T Consensus       222 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         222 PDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            667999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=6.7e-37  Score=343.39  Aligned_cols=255  Identities=23%  Similarity=0.262  Sum_probs=202.2

Q ss_pred             HHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          510 VATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       510 ~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      ...++|+..++||+|+||.||+++.. .+..+|+|.+...   .......+.+|+.+++.++||||+++++++..++..+
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~  119 (370)
T cd05596          40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY  119 (370)
T ss_pred             CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            34578999999999999999999875 5678999987542   2233456788999999999999999999999999999


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      +||||+++|+|.+++...   .+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus       120 lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~  193 (370)
T cd05596         120 MVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMD  193 (370)
T ss_pred             EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence            999999999999998543   47788888999999999999995   899999999999999999999999999987643


Q ss_pred             CCCccccccccccCCcccCccccccc----CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQ----QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK  741 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~----~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  741 (851)
                      ... ........||+.|+|||++.+.    .++.++|||||||+||||++|+.||........      ........   
T Consensus       194 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~------~~~i~~~~---  263 (370)
T cd05596         194 ANG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT------YSKIMDHK---  263 (370)
T ss_pred             CCC-cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH------HHHHHcCC---
Confidence            211 1122345799999999998653    488999999999999999999999876432111      11111000   


Q ss_pred             cccCccCCCCCChhHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 047215          742 SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKN--RPTMGEVLWH  784 (851)
Q Consensus       742 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~  784 (851)
                          ..+........+..+.+++.+||+.+|.+  ||+++|+++|
T Consensus       264 ----~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         264 ----NSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             ----CcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence                00110111234567899999999999987  9999999999

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=3.3e-36  Score=339.83  Aligned_cols=261  Identities=22%  Similarity=0.385  Sum_probs=204.3

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCCC-hhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCC
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQS-EQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQN  582 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~  582 (851)
                      ..++|...+.||+|+||.||+|++.      .+..+|+|++.... ......+.+|+++|.++. ||||++++++|...+
T Consensus        35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~  114 (401)
T cd05107          35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG  114 (401)
T ss_pred             cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence            4456777789999999999999864      23578999987542 333457889999999997 999999999999999


Q ss_pred             cEEEEEEecCCcchhhhccCCC----------------------------------------------------------
Q 047215          583 EMILVYEYMANGTLRSHLFGSD----------------------------------------------------------  604 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~----------------------------------------------------------  604 (851)
                      ..++||||+++|+|.++|+...                                                          
T Consensus       115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (401)
T cd05107         115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD  194 (401)
T ss_pred             CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence            9999999999999999985421                                                          


Q ss_pred             --------------------------------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeE
Q 047215          605 --------------------------------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL  646 (851)
Q Consensus       605 --------------------------------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NIL  646 (851)
                                                            ...+++.++++++.|++.||.|||+   .+++||||||+|||
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~NiL  271 (401)
T cd05107         195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNVL  271 (401)
T ss_pred             chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcceEE
Confidence                                                  1246777889999999999999995   89999999999999


Q ss_pred             EcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchh
Q 047215          647 LDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQI  725 (851)
Q Consensus       647 ld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~  725 (851)
                      +++++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.|+......+. 
T Consensus       272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~-  350 (401)
T cd05107         272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ-  350 (401)
T ss_pred             EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH-
Confidence            99999999999999875322111111223356788999999998899999999999999999998 7777754322111 


Q ss_pred             cHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          726 NLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       726 ~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                           ......         .......+..++..+.+++.+||+.+|.+||+++++++.|+.++
T Consensus       351 -----~~~~~~---------~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         351 -----FYNAIK---------RGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             -----HHHHHH---------cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence                 001100         11111223345677999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=4.6e-36  Score=327.48  Aligned_cols=263  Identities=24%  Similarity=0.453  Sum_probs=208.8

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc--------CcceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccC
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE--------DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQ  581 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~--------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~  581 (851)
                      .++|...+.||+|+||.||+|+..        ++..+++|..... .......+.+|+.+++.+ +||||+++++++...
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            466778889999999999999742        2346888887654 344567899999999999 899999999999999


Q ss_pred             CcEEEEEEecCCcchhhhccCCC--------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE
Q 047215          582 NEMILVYEYMANGTLRSHLFGSD--------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL  647 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl  647 (851)
                      ...++||||+++|+|.+++....              ...+++.+++.++.|+++||.|||+   .+++||||||+|||+
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nili  170 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVLV  170 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEEE
Confidence            99999999999999999986432              2357888999999999999999995   899999999999999


Q ss_pred             cCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhc
Q 047215          648 DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQIN  726 (851)
Q Consensus       648 d~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~  726 (851)
                      +.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..|+....      
T Consensus       171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------  244 (304)
T cd05101         171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------  244 (304)
T ss_pred             cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC------
Confidence            9999999999999986543322222333456778999999998899999999999999999998 666664332      


Q ss_pred             HHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhh
Q 047215          727 LADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE  793 (851)
Q Consensus       727 l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~  793 (851)
                      ..++.......          .....+..++..+.+++.+||+.+|.+|||+.|+++.|..+..+..
T Consensus       245 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~~  301 (304)
T cd05101         245 VEELFKLLKEG----------HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLTT  301 (304)
T ss_pred             HHHHHHHHHcC----------CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhhh
Confidence            11211111111          0112234566779999999999999999999999999998876643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.3e-36  Score=337.30  Aligned_cols=265  Identities=21%  Similarity=0.226  Sum_probs=201.0

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      .++|+..+.||+|+||.||++... .+..+|+|....      ..+.+|++++++++||||+++++++..+...++|+|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~  164 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR  164 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence            467999999999999999999864 567889996542      3467899999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +. ++|..++...  ..+++.+++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++...... .
T Consensus       165 ~~-~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-~  237 (391)
T PHA03212        165 YK-TDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-A  237 (391)
T ss_pred             CC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCccccccccc-c
Confidence            95 6888887443  358899999999999999999995   899999999999999999999999999997532211 1


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchh-----cHHHHHHHHhh---------
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI-----NLADWAMKWQK---------  736 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~-----~l~~~~~~~~~---------  736 (851)
                      .......||+.|+|||++.+..++.++|||||||++|||++|+.|+.........     .+.........         
T Consensus       238 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~  317 (391)
T PHA03212        238 NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDA  317 (391)
T ss_pred             cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcch
Confidence            1223457999999999999999999999999999999999999876543221100     00000000000         


Q ss_pred             hcccccc---------cCccCCCCC--ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          737 QRSLKSI---------IDPHLKGNY--SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       737 ~~~~~~i---------~d~~l~~~~--~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      ...+..+         ..+..+...  ....+..+.+|+.+||+.||.+|||++|+++|         +|+++
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h---------p~f~~  381 (391)
T PHA03212        318 QANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF---------AAFQD  381 (391)
T ss_pred             hHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC---------hhhcc
Confidence            0000000         000000000  01345678999999999999999999999999         78764

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.3e-36  Score=340.76  Aligned_cols=256  Identities=23%  Similarity=0.289  Sum_probs=202.1

Q ss_pred             HHHHHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC
Q 047215          507 EIRVATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN  582 (851)
Q Consensus       507 ~l~~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~  582 (851)
                      ++....++|+..++||+|+||.||+++.. ++..+|+|.+...   .......+.+|+.+++.++||||+++++++..++
T Consensus        37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~  116 (370)
T cd05621          37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK  116 (370)
T ss_pred             hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence            34445678999999999999999999875 4678899987542   2233456889999999999999999999999999


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      ..++||||+++|+|.+++...   .+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++
T Consensus       117 ~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a~  190 (370)
T cd05621         117 YLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCM  190 (370)
T ss_pred             EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecccce
Confidence            999999999999999998543   47888999999999999999995   899999999999999999999999999997


Q ss_pred             cCCCCCccccccccccCCcccCccccccc----CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhc
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQ----QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR  738 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~  738 (851)
                      ...... ........||+.|+|||++.+.    .++.++|||||||+||||++|+.||........      ...     
T Consensus       191 ~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~------~~~-----  258 (370)
T cd05621         191 KMDETG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT------YSK-----  258 (370)
T ss_pred             ecccCC-ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH------HHH-----
Confidence            643211 1122356799999999999754    378999999999999999999999975432111      111     


Q ss_pred             ccccccCccCCCCCC--hhHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 047215          739 SLKSIIDPHLKGNYS--PESLEKFGEIAEKCLDDEGKN--RPTMGEVLWH  784 (851)
Q Consensus       739 ~~~~i~d~~l~~~~~--~~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~  784 (851)
                          +.+......++  ...+..+++++.+||..++.+  ||++.|+++|
T Consensus       259 ----i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         259 ----IMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             ----HHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence                11111111111  234567889999999865543  8999999999

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=1.7e-36  Score=341.70  Aligned_cols=253  Identities=22%  Similarity=0.320  Sum_probs=197.3

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .|+..+.||+|+||+||+|+.. .+..+|+|++...   .......+.+|++++++++||||+++++++.+++..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            5788899999999999999864 5678999988653   23445678999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++|+|.+++...  ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus        82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~  156 (381)
T cd05626          82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN  156 (381)
T ss_pred             cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence            99999999998554  357888899999999999999995   8999999999999999999999999999753210000


Q ss_pred             ---------------------------------------------cccccccccCCcccCcccccccCCCchHHHHHHHH
Q 047215          670 ---------------------------------------------THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGV  704 (851)
Q Consensus       670 ---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~Gv  704 (851)
                                                                   ........||+.|+|||++.+..++.++|||||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~  236 (381)
T cd05626         157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV  236 (381)
T ss_pred             cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence                                                         00012356999999999999999999999999999


Q ss_pred             HHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHH--hcccCCCCCCCHHHHH
Q 047215          705 VLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEK--CLDDEGKNRPTMGEVL  782 (851)
Q Consensus       705 vL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~--Cl~~dP~~RPt~~evl  782 (851)
                      ++|||++|+.||....+.+..      .......       ..+........+..+.+++.+  |+..++..||++++++
T Consensus       237 il~elltG~~Pf~~~~~~~~~------~~i~~~~-------~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l  303 (381)
T cd05626         237 ILFEMLVGQPPFLAPTPTETQ------LKVINWE-------NTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIK  303 (381)
T ss_pred             HHHHHHhCCCCCcCCCHHHHH------HHHHccc-------cccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHh
Confidence            999999999999764432110      0000000       000001111234567788877  5566666799999999


Q ss_pred             HH
Q 047215          783 WH  784 (851)
Q Consensus       783 ~~  784 (851)
                      .|
T Consensus       304 ~h  305 (381)
T cd05626         304 AH  305 (381)
T ss_pred             cC
Confidence            99

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.9e-37  Score=341.91  Aligned_cols=253  Identities=22%  Similarity=0.337  Sum_probs=201.2

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..++||+|+||.||+++.. .++.+|||++...   .......+.+|+.+++.++||||+++++++..++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            47889999999999999999875 5788999988643   2344566889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  155 (364)
T cd05599          81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH  155 (364)
T ss_pred             CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence            999999999998653  358999999999999999999995   899999999999999999999999999986432111


Q ss_pred             cc------------------------------------ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhC
Q 047215          669 HT------------------------------------HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA  712 (851)
Q Consensus       669 ~~------------------------------------~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG  712 (851)
                      ..                                    .......||+.|+|||++....++.++|||||||++|||++|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G  235 (364)
T cd05599         156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG  235 (364)
T ss_pred             cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence            00                                    001124699999999999999999999999999999999999


Q ss_pred             CcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 047215          713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT---MGEVLWH  784 (851)
Q Consensus       713 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt---~~evl~~  784 (851)
                      +.||....+.+.   .   .......       ..+........++.+.+++.+|+. +|.+|++   ++|+++|
T Consensus       236 ~~Pf~~~~~~~~---~---~~i~~~~-------~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h  296 (364)
T cd05599         236 YPPFCSDNPQET---Y---RKIINWK-------ETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH  296 (364)
T ss_pred             CCCCCCCCHHHH---H---HHHHcCC-------CccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence            999976533211   1   1110000       000000111234568899999996 8999998   9999999

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=6.8e-36  Score=320.14  Aligned_cols=254  Identities=24%  Similarity=0.372  Sum_probs=197.3

Q ss_pred             ceeeeeeeecceEEEEEEEcCcc---eeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC------CcE
Q 047215          516 DESLMIGVGGFGKVFKGEIEDCT---LAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ------NEM  584 (851)
Q Consensus       516 ~~~~~LG~G~fG~Vykg~~~~~~---~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~------~~~  584 (851)
                      .+.++||+|+||.||+|...+..   .+|+|.+...  .....+.+..|++++++++||||++++++|...      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            45678999999999999875442   5788877653  345567899999999999999999999988432      356


Q ss_pred             EEEEEecCCcchhhhccCC----CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccc
Q 047215          585 ILVYEYMANGTLRSHLFGS----DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL  660 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~----~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGl  660 (851)
                      ++++||+++|+|.+++...    ....+++..+..++.|++.||.|||+   ++|+||||||+|||+++++.+||+|||+
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  158 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGL  158 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCCc
Confidence            8999999999999887321    23458899999999999999999995   8999999999999999999999999999


Q ss_pred             cccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcc
Q 047215          661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRS  739 (851)
Q Consensus       661 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~  739 (851)
                      ++...............++..|++||++.+..++.++||||||+++|||++ |+.||......   ..   .... ..+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~---~~~~-~~~~  231 (272)
T cd05075         159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS---EI---YDYL-RQGN  231 (272)
T ss_pred             ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HH---HHHH-HcCC
Confidence            986433222111223346778999999999999999999999999999999 77777543221   11   1111 1111


Q ss_pred             cccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          740 LKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       740 ~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      .         ...+..++..+.+++.+||+.+|.+|||+.+++++|+.+
T Consensus       232 ~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         232 R---------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             C---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            0         012234556789999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=2.7e-36  Score=325.49  Aligned_cols=254  Identities=21%  Similarity=0.322  Sum_probs=201.9

Q ss_pred             CCceeeeeeeecceEEEEEEEcC------cceeEEeecCCCCh-hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIED------CTLAAIKRANPQSE-QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~~------~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      +|+..+.||+|+||.||+|...+      +..+|+|++..... ...+.+..|+.++++++||||+++++++......++
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~   85 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM   85 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence            35556789999999999998643      46789999875533 334678899999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCC--------------CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe
Q 047215          587 VYEYMANGTLRSHLFGS--------------DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV  652 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~  652 (851)
                      ++||+++++|.+++...              ....+++..+.+++.|++.||.|||+   .+++||||||+|||+++++.
T Consensus        86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~  162 (283)
T cd05091          86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLN  162 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCc
Confidence            99999999999988421              12357888899999999999999995   89999999999999999999


Q ss_pred             EEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHH
Q 047215          653 AKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWA  731 (851)
Q Consensus       653 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~  731 (851)
                      +||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..|+......      ++.
T Consensus       163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~------~~~  236 (283)
T cd05091         163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ------DVI  236 (283)
T ss_pred             eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH------HHH
Confidence            99999999886433222222233456789999999988889999999999999999998 77676543221      111


Q ss_pred             HHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          732 MKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       732 ~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      ....         +.. ....+..++..+.+++.+||+.+|.+||++.+++..|+
T Consensus       237 ~~i~---------~~~-~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~  281 (283)
T cd05091         237 EMIR---------NRQ-VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR  281 (283)
T ss_pred             HHHH---------cCC-cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence            1111         111 11234456677999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=3.3e-36  Score=324.74  Aligned_cols=246  Identities=25%  Similarity=0.373  Sum_probs=197.5

Q ss_pred             eeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcch
Q 047215          521 IGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL  596 (851)
Q Consensus       521 LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL  596 (851)
                      ||+|+||+||++... +++.+|+|.+....   ....+.+..|++++++++||||+++.+++..+...++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            699999999999864 56789999876532   23345678899999999999999999999999999999999999999


Q ss_pred             hhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccccc
Q 047215          597 RSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST  674 (851)
Q Consensus       597 ~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~  674 (851)
                      .+++..  .....+++.++..++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||+++......  ....
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--~~~~  155 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--SKTK  155 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC--cccc
Confidence            888743  233568999999999999999999995   899999999999999999999999999987543221  1223


Q ss_pred             ccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCCh
Q 047215          675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSP  754 (851)
Q Consensus       675 ~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~  754 (851)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||........  ......         .+....  ..++.
T Consensus       156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~--~~~~~~---------~~~~~~--~~~~~  222 (280)
T cd05608         156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQ---------RILNDS--VTYPD  222 (280)
T ss_pred             ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh--HHHHHH---------hhcccC--CCCcc
Confidence            45689999999999999999999999999999999999999875432211  000000         111111  12234


Q ss_pred             hHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          755 ESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       755 ~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                      ..+..+.+++.+||+.||++||     +++++++|
T Consensus       223 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         223 KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence            4566789999999999999999     88999998

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=4.8e-36  Score=324.70  Aligned_cols=260  Identities=25%  Similarity=0.391  Sum_probs=203.7

Q ss_pred             HHhcCCceeeeeeeecceEEEEEEEcC------cceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC
Q 047215          510 VATNNFDESLMIGVGGFGKVFKGEIED------CTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN  582 (851)
Q Consensus       510 ~~t~~f~~~~~LG~G~fG~Vykg~~~~------~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~  582 (851)
                      ..+++|++.++||+|+||.||+|..++      +..+|+|.+.... ......+.+|+.++++++||||+++++++...+
T Consensus         3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (288)
T cd05061           3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ   82 (288)
T ss_pred             ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            356788999999999999999997542      3478999876543 334456889999999999999999999999999


Q ss_pred             cEEEEEEecCCcchhhhccCCC--------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEE
Q 047215          583 EMILVYEYMANGTLRSHLFGSD--------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAK  654 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~--------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~k  654 (851)
                      ..++||||+++|+|.+++....        ....++..+.+++.|++.||.|||+   ++++||||||+|||++.++.+|
T Consensus        83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~  159 (288)
T cd05061          83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVK  159 (288)
T ss_pred             CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEE
Confidence            9999999999999999995421        2445778889999999999999994   8999999999999999999999


Q ss_pred             EeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHH
Q 047215          655 MSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMK  733 (851)
Q Consensus       655 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~  733 (851)
                      |+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..|+......+   ..   ..
T Consensus       160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~---~~---~~  233 (288)
T cd05061         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ---VL---KF  233 (288)
T ss_pred             ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH---HH
Confidence            999999886433222222222345678999999998899999999999999999998 677775432211   11   11


Q ss_pred             HhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          734 WQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       734 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                               +.+... ...+..++..+.+++.+||+.+|++|||+.++++.|...
T Consensus       234 ---------~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         234 ---------VMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             ---------HHcCCC-CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence                     111111 112334457799999999999999999999998887654

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.3e-36  Score=319.74  Aligned_cols=255  Identities=25%  Similarity=0.417  Sum_probs=200.3

Q ss_pred             CceeeeeeeecceEEEEEEEcC----cceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCc-----
Q 047215          515 FDESLMIGVGGFGKVFKGEIED----CTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE-----  583 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~~----~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~-----  583 (851)
                      |++.+.||+|+||.||+|....    ...+|+|++...  .......+.+|++.++.++||||+++++++.....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            4567789999999999998643    256899987753  33445689999999999999999999999866554     


Q ss_pred             -EEEEEEecCCcchhhhccCC----CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeec
Q 047215          584 -MILVYEYMANGTLRSHLFGS----DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF  658 (851)
Q Consensus       584 -~~lV~Ey~~~gsL~~~L~~~----~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DF  658 (851)
                       .++++||+++|+|..++...    ....+++..+..++.|++.||.|||+   .+++||||||+||++++++.+||+||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCc
Confidence             79999999999999888442    23468899999999999999999995   89999999999999999999999999


Q ss_pred             cccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhh
Q 047215          659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQ  737 (851)
Q Consensus       659 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~  737 (851)
                      |+++...............++..|+|||.+.+..++.++|||||||++|||++ |..|+......   ...++.   . .
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~---~~~~~~---~-~  230 (273)
T cd05035         158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH---EIYDYL---R-H  230 (273)
T ss_pred             cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH---H-c
Confidence            99986433222111222335678999999988899999999999999999999 77777543221   111111   1 1


Q ss_pred             cccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          738 RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       738 ~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      +        . ....+..++..+.+++.+||+.||.+|||+.|++++|+.+
T Consensus       231 ~--------~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         231 G--------N-RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             C--------C-CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            1        0 1122345567799999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=4.8e-36  Score=337.01  Aligned_cols=264  Identities=24%  Similarity=0.346  Sum_probs=200.4

Q ss_pred             CCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC-----cEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN-----EMI  585 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~-----~~~  585 (851)
                      +|+..++||+|+||.||++.. .+++.+|+|++...  .....+.+.+|+++++.++||||+++++++...+     ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            477888999999999999986 46788999988653  3344567889999999999999999999998776     789


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      +|+||+. ++|.+.+...  ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++...
T Consensus        81 lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~  154 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVEE  154 (372)
T ss_pred             EEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence            9999997 5777777433  468999999999999999999995   899999999999999999999999999997643


Q ss_pred             CCCccccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHH----------HHH
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA----------MKW  734 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~----------~~~  734 (851)
                      ... ........+++.|+|||++.+. .++.++|||||||++|||++|+.||....+..+.......          ...
T Consensus       155 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~  233 (372)
T cd07853         155 PDE-SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSAC  233 (372)
T ss_pred             cCc-cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence            221 1122334578999999998764 5899999999999999999999999765543332211110          000


Q ss_pred             --hhhcccccccCc-cC--CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          735 --QKQRSLKSIIDP-HL--KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       735 --~~~~~~~~i~d~-~l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                        ...........+ ..  .........+.+.+|+.+||+.||.+|||+.|+++|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         234 EGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             HHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence              000000000000 00  001223345678999999999999999999999999

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=2.7e-36  Score=333.24  Aligned_cols=249  Identities=23%  Similarity=0.369  Sum_probs=197.4

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      ++||+|+||.||+++.. +++.+|+|.+...   .......+..|+.++.++ +||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            36999999999999865 4678899987653   333455678899988877 799999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |+|..++...  ..+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++.....  ....
T Consensus        81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~--~~~~  153 (329)
T cd05618          81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--GDTT  153 (329)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC--CCcc
Confidence            9999888543  468899999999999999999995   89999999999999999999999999998753221  1122


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcc--hhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD--QINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~--~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......  ......+........        .  ..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--------~--~~  223 (329)
T cd05618         154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--------Q--IR  223 (329)
T ss_pred             ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC--------C--CC
Confidence            34678999999999999999999999999999999999999986322111  111112221111111        1  12


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCC------HHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPT------MGEVLWH  784 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt------~~evl~~  784 (851)
                      ++...+..+.+++.+||+.||.+||+      +.++++|
T Consensus       224 ~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05618         224 IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  262 (329)
T ss_pred             CCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence            33445567899999999999999998      6899888

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=7.2e-36  Score=318.02  Aligned_cols=252  Identities=27%  Similarity=0.424  Sum_probs=202.7

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecC
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      ++|++.++||+|+||.||+|..+++..+++|.+..... ....+.+|+.++++++|||++++++++.. ...+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~   83 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYMS   83 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEecC
Confidence            56777889999999999999988888899998875433 34578999999999999999999999854 56899999999


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccc
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~  672 (851)
                      +++|.+++.......+++.++..++.+++.||.|||+   .+++||||||+||++++++.+||+|||++........ ..
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~-~~  159 (260)
T cd05070          84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY-TA  159 (260)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCccc-cc
Confidence            9999999976555568999999999999999999995   8999999999999999999999999999876432211 11


Q ss_pred             ccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      .....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+   ..+   ...          ......
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~---~~~----------~~~~~~  223 (260)
T cd05070         160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE---VLE---QVE----------RGYRMP  223 (260)
T ss_pred             ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH---HHH---HHH----------cCCCCC
Confidence            122235668999999988899999999999999999999 777775432211   111   111          011112


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      .+...+..+.+++.+||+.+|.+|||+.++++.|+
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  258 (260)
T cd05070         224 CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLE  258 (260)
T ss_pred             CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence            23445667999999999999999999999988876

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=3.3e-36  Score=331.82  Aligned_cols=245  Identities=24%  Similarity=0.342  Sum_probs=196.5

Q ss_pred             CceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHH---HhcCCcceeeEEEEEccCCcEEEE
Q 047215          515 FDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEML---SKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l---~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      |++.+.||+|+||.||+|... .++.+|||++...   .....+.+.+|++++   ++++||||+++++++..++..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            567889999999999999865 5788999988643   223345566676655   566899999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+++|+|...+..   ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++.....
T Consensus        81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~  154 (324)
T cd05589          81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF  154 (324)
T ss_pred             EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence            999999999988754   358999999999999999999995   89999999999999999999999999998753221


Q ss_pred             CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                      .  .......|++.|+|||++.+..++.++|||||||++|||++|+.||......+      .......         ..
T Consensus       155 ~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~------~~~~i~~---------~~  217 (324)
T cd05589         155 G--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE------VFDSIVN---------DE  217 (324)
T ss_pred             C--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH------HHHHHHh---------CC
Confidence            1  22334679999999999999999999999999999999999999987543221      1111110         00


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                        ..++...+..+.+++.+||+.||.+||     ++.++++|
T Consensus       218 --~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~  257 (324)
T cd05589         218 --VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ  257 (324)
T ss_pred             --CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence              112334456688999999999999999     68888887

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=5.6e-36  Score=326.76  Aligned_cols=261  Identities=29%  Similarity=0.457  Sum_probs=204.9

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC-cc--eeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED-CT--LAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~-~~--~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      ++|+..+.||+|+||.||+|..+. +.  .+++|+.... .......+.+|++++.++ +||||+++++++..++..++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            578888999999999999998643 33  4577776543 345567889999999999 899999999999999999999


Q ss_pred             EEecCCcchhhhccCCC--------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeE
Q 047215          588 YEYMANGTLRSHLFGSD--------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA  653 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~  653 (851)
                      |||+++|+|.++++...              ...+++.+++.++.|++.||+|||+   .+++||||||+|||++.++.+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~~  163 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  163 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCcE
Confidence            99999999999986432              2357899999999999999999994   899999999999999999999


Q ss_pred             EEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHH
Q 047215          654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAM  732 (851)
Q Consensus       654 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~  732 (851)
                      ||+|||+++.....   .......++..|+|||++.+..++.++|||||||+++||+| |..||......+      ...
T Consensus       164 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~  234 (303)
T cd05088         164 KIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------LYE  234 (303)
T ss_pred             EeCccccCcccchh---hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH------HHH
Confidence            99999998642111   11112234668999999988889999999999999999998 888886432211      111


Q ss_pred             HHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhh
Q 047215          733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAW  795 (851)
Q Consensus       733 ~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w  795 (851)
                      ...          .......+...+..+.+++.+||+.+|++||++++++++|+.+.+-...|
T Consensus       235 ~~~----------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~~  287 (303)
T cd05088         235 KLP----------QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY  287 (303)
T ss_pred             HHh----------cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhhh
Confidence            110          00111122234567899999999999999999999999998776554444

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=9.8e-36  Score=317.69  Aligned_cols=255  Identities=29%  Similarity=0.433  Sum_probs=203.9

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .++|.+.++||+|+||.||+|+.++...+++|++.... ...+.|.+|++++++++||||+++++++.. ...++||||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~   82 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM   82 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence            35688899999999999999998777779999887533 234678999999999999999999998754 5689999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++|+|.+++.......+++.++..++.|+++||+|||+   .+++||||||+||++++++.+||+|||+++....... .
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-~  158 (262)
T cd05071          83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-T  158 (262)
T ss_pred             CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeecccccc-c
Confidence            99999999976544568899999999999999999995   8999999999999999999999999999875432221 1


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      ......++..|+|||++.+..++.++||||||+++|||++ |+.||....+.+.      .... ..         ....
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~------~~~~-~~---------~~~~  222 (262)
T cd05071         159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV------LDQV-ER---------GYRM  222 (262)
T ss_pred             cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH------HHHH-hc---------CCCC
Confidence            1123346678999999988899999999999999999999 6767754332111      0000 00         0011


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      ..+.+++..+.+++.+|++.+|++||++.++++.|+..
T Consensus       223 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         223 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            22345667789999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.3e-36  Score=322.56  Aligned_cols=256  Identities=26%  Similarity=0.399  Sum_probs=205.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC------cceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED------CTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~------~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~  584 (851)
                      .++|...+.||+|+||.||+|...+      +..+++|..... .......+.+|+.++++++||||+++++++..+...
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            4678889999999999999998643      357899987654 334456789999999999999999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCC--------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEe
Q 047215          585 ILVYEYMANGTLRSHLFGSD--------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMS  656 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~--------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~  656 (851)
                      ++||||+++|+|.+++....        ...+++..++.++.|++.||.|||+   .+++||||||+|||++.++.+||+
T Consensus        85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~  161 (277)
T cd05032          85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIG  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEEC
Confidence            99999999999999985422        2347889999999999999999994   899999999999999999999999


Q ss_pred             eccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHh
Q 047215          657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQ  735 (851)
Q Consensus       657 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~  735 (851)
                      |||+++...............++..|+|||.+....++.++|||||||++|||++ |+.|+......+   ..++.    
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~~~----  234 (277)
T cd05032         162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE---VLKFV----  234 (277)
T ss_pred             CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH---HHHHH----
Confidence            9999876433222222233456789999999988889999999999999999998 887775433221   11111    


Q ss_pred             hhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          736 KQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       736 ~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      ..+.         ....+..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus       235 ~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         235 IDGG---------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             hcCC---------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            1110         11223345677999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=7.8e-36  Score=322.02  Aligned_cols=266  Identities=25%  Similarity=0.366  Sum_probs=202.4

Q ss_pred             ceeeeeeeecceEEEEEEE-----cCcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEcc--CCcEEEE
Q 047215          516 DESLMIGVGGFGKVFKGEI-----EDCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILV  587 (851)
Q Consensus       516 ~~~~~LG~G~fG~Vykg~~-----~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~--~~~~~lV  587 (851)
                      ...+.||+|+||.||++..     .++..+|+|...... ......|.+|++++++++||||+++++++..  ....++|
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            7778999999999988653     346788999887543 3445678899999999999999999999854  3468999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+++|+|.+++...   .+++.++..++.|++.||+|||+   .+++||||||+|||+++++.+||+|||+++.....
T Consensus        87 ~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~  160 (283)
T cd05080          87 MEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG  160 (283)
T ss_pred             ecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccccCCc
Confidence            9999999999998543   48999999999999999999995   89999999999999999999999999998764332


Q ss_pred             Ccc-ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          668 EHT-HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       668 ~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      ... .......++..|+|||++....++.++||||||++++||++|+.|+....... .....+..............+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T cd05080         161 HEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-EEMIGPKQGQMTVVRLIELLER  239 (283)
T ss_pred             chhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-hhhhcccccccchhhhhhhhhc
Confidence            111 11222345667999999998899999999999999999999998875432210 0111110000000011111222


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      ......+..++..+.+++.+||+.+|++|||++++++.|+.+
T Consensus       240 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         240 GMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence            222233455667899999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=7.9e-38  Score=306.69  Aligned_cols=258  Identities=22%  Similarity=0.316  Sum_probs=204.5

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      +.|++.++||+|.|+.||+... ..|+..++|.+...  +..+.+++.+|+++.+.|+||||++|...+.+....+||+|
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence            4566677899999999998864 45677777765432  34467889999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc---CCCeEEEeeccccccCCC
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld---~~~~~kl~DFGla~~~~~  666 (851)
                      +|++++|..-+-.+  .-+++...-....||+++|.|+|+   ++|||||+||+|+||-   ..--+||+|||+|.... 
T Consensus        91 ~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-  164 (355)
T KOG0033|consen   91 LVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-  164 (355)
T ss_pred             cccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEEeC-
Confidence            99999997765322  345677777889999999999995   9999999999999993   44569999999998754 


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                        .........|||+|||||+++..+|+..+|||+.||+||-|+.|+.||.+....   .+.+-   .+   .-..-+++
T Consensus       165 --~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~---rlye~---I~---~g~yd~~~  233 (355)
T KOG0033|consen  165 --DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYEQ---IK---AGAYDYPS  233 (355)
T ss_pred             --CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH---HHHHH---Hh---ccccCCCC
Confidence              223345677999999999999999999999999999999999999999864321   11111   10   01111222


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCC
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDD  800 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~  800 (851)
                      ..    .+...++.++|+++||..||.+|.|+.|+|+|         +|..+.+
T Consensus       234 ~~----w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H---------pWi~~r~  274 (355)
T KOG0033|consen  234 PE----WDTVTPEAKSLIRRMLTVNPKKRITADEALKH---------PWICNRE  274 (355)
T ss_pred             cc----cCcCCHHHHHHHHHHhccChhhhccHHHHhCC---------chhcchH
Confidence            22    23455668999999999999999999999999         7776544

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=5.3e-36  Score=323.01  Aligned_cols=255  Identities=28%  Similarity=0.437  Sum_probs=204.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .++...++||+|+||.||++...      .+..+++|............+.+|++++++++||||+++++++..++..++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            45677889999999999999642      345788898887777777889999999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCC-------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeE
Q 047215          587 VYEYMANGTLRSHLFGSD-------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA  653 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~  653 (851)
                      +|||+++|+|.+++....             ...+++.+++.++.|++.||+|||+   .+++||||||+|||+++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCE
Confidence            999999999999986432             1358899999999999999999994   899999999999999999999


Q ss_pred             EEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHH
Q 047215          654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAM  732 (851)
Q Consensus       654 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~  732 (851)
                      ||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |+.||......+.   .   .
T Consensus       162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~---~---~  235 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA---I---E  235 (280)
T ss_pred             EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH---H---H
Confidence            9999999875433222122223345678999999999999999999999999999998 8877754332211   1   1


Q ss_pred             HHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       733 ~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      .. ..+         .....+..++..+.+++.+||+.||.+||+++++++.|+
T Consensus       236 ~~-~~~---------~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         236 CI-TQG---------RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             HH-HcC---------ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            10 000         001122345567899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=3.7e-36  Score=331.40  Aligned_cols=247  Identities=23%  Similarity=0.340  Sum_probs=199.0

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCC-cceeeEEEEEccCCcEEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRH-RHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H-pnIv~l~g~~~~~~~~~lV~  588 (851)
                      +|+..+.||+|+||.||+|+.. .++.+|+|++...   .....+.+..|++++..++| ++|+++++++...+..++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            4788899999999999999865 4568999987643   23445678889999999976 46888999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus        81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~  155 (324)
T cd05587          81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG  155 (324)
T ss_pred             cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence            999999999988543  358899999999999999999995   899999999999999999999999999987432211


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                        .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+   +..   ..         ...  
T Consensus       156 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~~---~i---------~~~--  216 (324)
T cd05587         156 --KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE---LFQ---SI---------MEH--  216 (324)
T ss_pred             --CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---HHH---HH---------HcC--
Confidence              12334579999999999999999999999999999999999999987543221   111   11         110  


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTM-----GEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~evl~~  784 (851)
                      ...++...+..+.+++.+||+.||.+|++.     +++++|
T Consensus       217 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  257 (324)
T cd05587         217 NVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH  257 (324)
T ss_pred             CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            112233455678999999999999999976     788777

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=1.3e-36  Score=335.94  Aligned_cols=253  Identities=22%  Similarity=0.286  Sum_probs=202.4

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+++.. +++.+|+|++...   .......+.+|+.+++.++||||+++++++..++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            46888999999999999999864 5778999988753   2234567889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++.... ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~  156 (330)
T cd05601          81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK  156 (330)
T ss_pred             CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence            9999999999986542 468899999999999999999995   899999999999999999999999999997643222


Q ss_pred             ccccccccccCCcccCccccc------ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFW------RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~------~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      . .......||+.|+|||++.      ...++.++|||||||++|||++|+.||.......      ..........   
T Consensus       157 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~------~~~~i~~~~~---  226 (330)
T cd05601         157 M-VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK------TYNNIMNFQR---  226 (330)
T ss_pred             c-eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH------HHHHHHcCCC---
Confidence            1 1223456899999999987      4567899999999999999999999987543221      1111111100   


Q ss_pred             ccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       743 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                          .+.....+..+..+.+|+.+||+ +|.+|||+++++.|
T Consensus       227 ----~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         227 ----FLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             ----ccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence                01101112345668999999998 99999999999999

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-36  Score=327.92  Aligned_cols=257  Identities=27%  Similarity=0.405  Sum_probs=214.4

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC---c--ceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED---C--TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~---~--~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      ......++||+|-||.||+|.+-+   +  -.||||..+.. ..+..+.|..|..+|+.++|||||+|+|+|.+ ...||
T Consensus       389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wi  467 (974)
T KOG4257|consen  389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWI  467 (974)
T ss_pred             hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeE
Confidence            344556789999999999998632   2  35789988874 55667889999999999999999999999975 57999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      |||.++.|.|..+|+.+. ..|+.......|.||+.+|.||||   ..+|||||..+|||+...--+||+||||+|....
T Consensus       468 vmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed  543 (974)
T KOG4257|consen  468 VMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYLED  543 (974)
T ss_pred             EEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhccc
Confidence            999999999999997654 468888999999999999999996   8999999999999999999999999999998665


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ...... +...-+..|||||.+.-++++.++|||.|||++||++. |..||.+-...+..               . -+.
T Consensus       544 ~~yYka-S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI---------------~-~iE  606 (974)
T KOG4257|consen  544 DAYYKA-SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI---------------G-HIE  606 (974)
T ss_pred             cchhhc-cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE---------------E-Eec
Confidence            444332 34456778999999999999999999999999999876 77888765433211               1 112


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      ..-+...|+.|++.+.-|+.+||+.||.+||.+.|+...|+.+++.
T Consensus       607 nGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qe  652 (974)
T KOG4257|consen  607 NGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQE  652 (974)
T ss_pred             CCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHH
Confidence            2223456789999999999999999999999999999999998874

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-36  Score=339.10  Aligned_cols=253  Identities=22%  Similarity=0.312  Sum_probs=197.9

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..++||+|+||.||+++. .++..+|||++...   .......+.+|++++++++||||+++++++..++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            4688899999999999999986 46788999987643   2334567889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~  155 (377)
T cd05629          81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH  155 (377)
T ss_pred             eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence            999999999998543  458888999999999999999995   899999999999999999999999999986321100


Q ss_pred             cc---------------------------------------------ccccccccCCcccCcccccccCCCchHHHHHHH
Q 047215          669 HT---------------------------------------------HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFG  703 (851)
Q Consensus       669 ~~---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~G  703 (851)
                      ..                                             .......||+.|+|||++.+..++.++||||||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  235 (377)
T cd05629         156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG  235 (377)
T ss_pred             ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence            00                                             000124699999999999999999999999999


Q ss_pred             HHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCC---CCHHH
Q 047215          704 VVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR---PTMGE  780 (851)
Q Consensus       704 vvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Pt~~e  780 (851)
                      |+||||++|+.||....+.+..      ......  ...+.   +..  ....+..+.+++.+||. +|.+|   +++.|
T Consensus       236 vil~elltG~~Pf~~~~~~~~~------~~i~~~--~~~~~---~p~--~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~  301 (377)
T cd05629         236 AIMFECLIGWPPFCSENSHETY------RKIINW--RETLY---FPD--DIHLSVEAEDLIRRLIT-NAENRLGRGGAHE  301 (377)
T ss_pred             hhhhhhhcCCCCCCCCCHHHHH------HHHHcc--CCccC---CCC--CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHH
Confidence            9999999999999764432110      010000  00000   000  11234568899999997 66665   69999


Q ss_pred             HHHH
Q 047215          781 VLWH  784 (851)
Q Consensus       781 vl~~  784 (851)
                      +++|
T Consensus       302 ~l~h  305 (377)
T cd05629         302 IKSH  305 (377)
T ss_pred             HhcC
Confidence            9999

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.4e-36  Score=317.77  Aligned_cols=250  Identities=28%  Similarity=0.409  Sum_probs=199.9

Q ss_pred             CCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          514 NFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      +|+..+.||+|+||.||+|..+++..+++|.+..... ....|.+|++++++++||||+++++++...+..++||||+++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            4666778999999999999987777889998764332 345688899999999999999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      ++|.+++.... ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++....... ...
T Consensus        84 ~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~-~~~  158 (256)
T cd05059          84 GCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY-TSS  158 (256)
T ss_pred             CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceecccccc-ccc
Confidence            99999986543 368999999999999999999995   8999999999999999999999999999876432111 111


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY  752 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~  752 (851)
                      ....++..|+|||.+.+..++.++||||||+++|||++ |+.|+....+.+   ..   ....      .    ......
T Consensus       159 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~---~~~~------~----~~~~~~  222 (256)
T cd05059         159 QGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE---VV---ESVS------A----GYRLYR  222 (256)
T ss_pred             CCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH---HH---HHHH------c----CCcCCC
Confidence            12224567999999999999999999999999999999 777776432211   11   1110      0    011122


Q ss_pred             ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       753 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                      +..++..+.+++.+||+.+|++|||+.|+++.|
T Consensus       223 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            234566799999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=6.9e-36  Score=316.80  Aligned_cols=250  Identities=27%  Similarity=0.370  Sum_probs=205.4

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +|+..+.||+|++|.||+|... ++..+++|.+...  .......+.+|++++++++||||+++++++..++..++||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            4677889999999999999875 5678899987543  345567889999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++.......+++.++.+++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++......  
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~--  155 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT--  155 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCcc--
Confidence            999999999976555678999999999999999999994   899999999999999999999999999987643321  


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      .......|++.|+|||++.+..++.++|+||||++++||++|+.|+......   ....   .. ..+    .     ..
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~---~~-~~~----~-----~~  219 (256)
T cd08529         156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG---ALIL---KI-IRG----V-----FP  219 (256)
T ss_pred             chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH---HHHH---HH-HcC----C-----CC
Confidence            1223456889999999999999999999999999999999999998654311   1111   10 011    0     11


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..+...+..+.+++.+||+.+|++||++.+++++
T Consensus       220 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         220 PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            1222445678999999999999999999999988

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=1.1e-35  Score=317.96  Aligned_cols=257  Identities=25%  Similarity=0.410  Sum_probs=205.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC-c---ceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED-C---TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~-~---~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .++|+..+.||+|+||.||+|+... +   ..+++|.+... .....+.+..|++++++++|||++++.+++...+..++
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            4578888999999999999998753 2   36889988755 34456779999999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+++++|.+++.... ..+++.++..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||++.....
T Consensus        84 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~  159 (268)
T cd05063          84 ITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLED  159 (268)
T ss_pred             EEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence            999999999999986543 468999999999999999999995   8999999999999999999999999999875432


Q ss_pred             CCccc-cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          667 MEHTH-VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       667 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      ..... .......+..|+|||++....++.++|||||||++|||++ |+.|+......      ++......        
T Consensus       160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~------~~~~~i~~--------  225 (268)
T cd05063         160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH------EVMKAIND--------  225 (268)
T ss_pred             ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH------HHHHHHhc--------
Confidence            21111 1111223457999999998899999999999999999997 99888654321      11111111        


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                        ......+.+++..+.+++.+||+.+|.+||++.++++.|+++
T Consensus       226 --~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         226 --GFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             --CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence              011122334567789999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.9e-36  Score=317.43  Aligned_cols=252  Identities=24%  Similarity=0.370  Sum_probs=203.3

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCC-----hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQS-----EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      ++|...++||+|++|.||++.. +.+..+++|.+....     ......+.+|++++++++||||+++++++..+...++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            5688889999999999999986 457888999865432     2234578899999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      |+||+++++|.+++...  ..+++..+.+++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++....
T Consensus        82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~  156 (263)
T cd06625          82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT  156 (263)
T ss_pred             EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence            99999999999988543  358889999999999999999994   8999999999999999999999999999875432


Q ss_pred             CCccc-cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          667 MEHTH-VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       667 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ..... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||........      ...         +..
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------~~~---------~~~  221 (263)
T cd06625         157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA------IFK---------IAT  221 (263)
T ss_pred             cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH------HHH---------Hhc
Confidence            21111 11234578899999999998999999999999999999999999865422111      000         001


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .......+......+.+++.+||+.+|.+|||+.++++|
T Consensus       222 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         222 QPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             cCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            111122344556678999999999999999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-38  Score=314.31  Aligned_cols=247  Identities=26%  Similarity=0.386  Sum_probs=210.4

Q ss_pred             CceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          515 FDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      |++.++||+|+||.|||+.+ +.|.++|||+....+  +.+++..||.+|++++.|++|+++|.+.....+|+|||||..
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA  112 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA  112 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence            66678899999999999986 467889999886543  457889999999999999999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |++.+.++.++ ++|++.++..++.+.++||+|||   ...-||||||+.||||+-+|.+||+|||.|....  +.....
T Consensus       113 GSiSDI~R~R~-K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLT--DTMAKR  186 (502)
T KOG0574|consen  113 GSISDIMRARR-KPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLT--DTMAKR  186 (502)
T ss_pred             CcHHHHHHHhc-CCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhh--hhHHhh
Confidence            99999986554 68999999999999999999999   4888999999999999999999999999986532  233345


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccccc-CccCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII-DPHLKGNY  752 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~-d~~l~~~~  752 (851)
                      .++.||+.|||||++..-.|..++||||+|+...||.-|++|+.+..|.....+               |. .|...-.-
T Consensus       187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM---------------IPT~PPPTF~K  251 (502)
T KOG0574|consen  187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM---------------IPTKPPPTFKK  251 (502)
T ss_pred             CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe---------------ccCCCCCCCCC
Confidence            678899999999999999999999999999999999999999987665432110               11 11111123


Q ss_pred             ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       753 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ++.-+..+-+++++||-+.|++|-|+.++++|
T Consensus       252 PE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  252 PEEWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             hHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence            45667889999999999999999999999999

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=2.4e-36  Score=332.28  Aligned_cols=242  Identities=24%  Similarity=0.352  Sum_probs=195.8

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      ++||+|+||.||+|+.+ +++.+|+|++...   .......+..|+.++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            36999999999999875 5678999987643   233456678899988877 699999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |+|.+++...  ..+++..+..++.|++.||.|||+   ++++||||||+|||++.++.+||+|||+++.....  ....
T Consensus        81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--~~~~  153 (320)
T cd05590          81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--GKTT  153 (320)
T ss_pred             chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC--CCcc
Confidence            9999988544  358899999999999999999995   89999999999999999999999999998753221  1123


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS  753 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  753 (851)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+   +   ...... .        .  ...+
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~---~---~~~i~~-~--------~--~~~~  216 (320)
T cd05590         154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD---L---FEAILN-D--------E--VVYP  216 (320)
T ss_pred             cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH---H---HHHHhc-C--------C--CCCC
Confidence            34579999999999999999999999999999999999999987543221   1   111110 0        0  0122


Q ss_pred             hhHHHHHHHHHHHhcccCCCCCCCH------HHHHHH
Q 047215          754 PESLEKFGEIAEKCLDDEGKNRPTM------GEVLWH  784 (851)
Q Consensus       754 ~~~~~~l~~l~~~Cl~~dP~~RPt~------~evl~~  784 (851)
                      ...+..+.+++.+||+.||.+||++      ++++.|
T Consensus       217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h  253 (320)
T cd05590         217 TWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH  253 (320)
T ss_pred             CCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence            3345678999999999999999998      788887

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=5.3e-36  Score=332.83  Aligned_cols=261  Identities=25%  Similarity=0.415  Sum_probs=201.6

Q ss_pred             hcCCceeeeeeeecceEEEEEEE------cCcceeEEeecCCCC-hhhHHHHHHHHHHHHhc-CCcceeeEEEEEcc-CC
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI------EDCTLAAIKRANPQS-EQGLAEFETEIEMLSKL-RHRHLVSLIGFCDE-QN  582 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~------~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~-~~  582 (851)
                      .++|+..+.||+|+||.||+|..      ..++.+|||++.... ......+.+|+.++.++ +||||++++++|.. +.
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            46788899999999999999973      346789999987542 33456788999999999 68999999998854 45


Q ss_pred             cEEEEEEecCCcchhhhccCCC----------------------------------------------------------
Q 047215          583 EMILVYEYMANGTLRSHLFGSD----------------------------------------------------------  604 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~----------------------------------------------------------  604 (851)
                      ..+++|||+++|+|.+++....                                                          
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  165 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence            6899999999999999885421                                                          


Q ss_pred             -------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccc
Q 047215          605 -------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK  677 (851)
Q Consensus       605 -------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~  677 (851)
                             ...+++.++.+++.|+++||.|||+   .+|+||||||+|||++.++.+||+|||+++...............
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  242 (343)
T cd05103         166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR  242 (343)
T ss_pred             hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence                   1236788899999999999999995   899999999999999999999999999987643221111122334


Q ss_pred             cCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhH
Q 047215          678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPES  756 (851)
Q Consensus       678 gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  756 (851)
                      ++..|+|||.+.+..++.++||||||+++|||++ |..|+........  .    ......+.         ....+...
T Consensus       243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~----~~~~~~~~---------~~~~~~~~  307 (343)
T cd05103         243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--F----CRRLKEGT---------RMRAPDYT  307 (343)
T ss_pred             CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH--H----HHHHhccC---------CCCCCCCC
Confidence            5678999999998899999999999999999997 7777754322111  0    01111110         01111223


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          757 LEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       757 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ++.+.+++.+||+.+|.+|||+.|++++|+.+.+
T Consensus       308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         308 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            4568999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.2e-35  Score=317.90  Aligned_cols=258  Identities=22%  Similarity=0.336  Sum_probs=205.8

Q ss_pred             HHHHHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          507 EIRVATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       507 ~l~~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      |++.+++++.....||+|+||.||+|+.. ++..+++|..........+.+.+|+.++++++|+||+++++++..++..+
T Consensus         2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   81 (268)
T cd06624           2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK   81 (268)
T ss_pred             CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence            34557788888889999999999999864 56778999888776667788999999999999999999999999999999


Q ss_pred             EEEEecCCcchhhhccCCCCCCC--chhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-CCeEEEeeccccc
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPL--TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-NFVAKMSDFGLSK  662 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l--~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-~~~~kl~DFGla~  662 (851)
                      +|+||+++++|.+++.... ..+  ++..+..++.|++.||.|||+   .+|+||||||+||+++. ++.+||+|||++.
T Consensus        82 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~  157 (268)
T cd06624          82 IFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSK  157 (268)
T ss_pred             EEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence            9999999999999986542 234  788889999999999999995   89999999999999976 6799999999987


Q ss_pred             cCCCCCccccccccccCCcccCccccccc--CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQ--QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL  740 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  740 (851)
                      .......  ......|+..|+|||++...  .++.++||||||+++|||++|+.|+.......   ...+....      
T Consensus       158 ~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~---~~~~~~~~------  226 (268)
T cd06624         158 RLAGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ---AAMFKVGM------  226 (268)
T ss_pred             ecccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh---hhHhhhhh------
Confidence            5332111  12234578999999998654  38899999999999999999999886432211   01111000      


Q ss_pred             ccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                           ......++....+.+.+++.+||+.+|.+|||+.|++.|
T Consensus       227 -----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         227 -----FKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             -----hccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence                 001112334456678999999999999999999999998

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.5e-37  Score=305.50  Aligned_cols=256  Identities=22%  Similarity=0.313  Sum_probs=203.7

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC-----h---hhHHHHHHHHHHHHhc-CCcceeeEEEEEcc
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-----E---QGLAEFETEIEMLSKL-RHRHLVSLIGFCDE  580 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~-----~---~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~  580 (851)
                      .-+.|...+.||+|..+.|-+...+ .+...|+|++....     +   .-.+.-.+|+.+|+++ .||+|+.+.++++.
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes   94 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES   94 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence            3456777889999999999888654 45667777764321     1   1234456799999999 69999999999999


Q ss_pred             CCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccc
Q 047215          581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL  660 (851)
Q Consensus       581 ~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGl  660 (851)
                      +..+++|+|.|+.|.|.|+|...  -.+++++..+|+.|+.+|++|||.   ++||||||||+|||+|++.++||+|||+
T Consensus        95 ~sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFGF  169 (411)
T KOG0599|consen   95 DAFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFGF  169 (411)
T ss_pred             cchhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEeccce
Confidence            99999999999999999999543  468999999999999999999994   9999999999999999999999999999


Q ss_pred             cccCCCCCccccccccccCCcccCcccccc------cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHH
Q 047215          661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWR------QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW  734 (851)
Q Consensus       661 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~  734 (851)
                      ++..+...   .....|||++|+|||.+..      ..|+..+|+|++||+||.|+.|.+||...   .++-+    .++
T Consensus       170 a~~l~~Ge---kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR---kQmlM----LR~  239 (411)
T KOG0599|consen  170 ACQLEPGE---KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR---KQMLM----LRM  239 (411)
T ss_pred             eeccCCch---hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH---HHHHH----HHH
Confidence            98755433   3467899999999999864      36889999999999999999999998532   11111    111


Q ss_pred             hhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          735 QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       735 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      ...+..      ....+-..+.+...++|+.+||+.||.+|.|++|+|.|..+
T Consensus       240 ImeGky------qF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff  286 (411)
T KOG0599|consen  240 IMEGKY------QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFF  286 (411)
T ss_pred             HHhccc------ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence            111111      11122234566778999999999999999999999999443

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=8.2e-36  Score=317.58  Aligned_cols=254  Identities=27%  Similarity=0.403  Sum_probs=205.7

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ..++|+..++||+|+||.||+|..++++.+++|.+..... ....+.+|+.++++++||||+++++++. .+..+++|||
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~   81 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY   81 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence            3467888999999999999999988889999998875433 3467899999999999999999999874 4578999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++.......+++.++..++.|++.||+|||+   .+++||||||+||++++++.++|+|||++........ 
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-  157 (260)
T cd05067          82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY-  157 (260)
T ss_pred             CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc-
Confidence            999999999876666678999999999999999999994   8999999999999999999999999999876432111 


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                      .......++..|+|||++....++.++||||||++++||++ |+.||......+   .   ..... .         ...
T Consensus       158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~---~~~~~-~---------~~~  221 (260)
T cd05067         158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE---V---IQNLE-R---------GYR  221 (260)
T ss_pred             ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH---H---HHHHH-c---------CCC
Confidence            11223345678999999998899999999999999999999 888886543211   1   11110 0         011


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      ...+...+..+.+++.+||+.+|++||++++++..|+
T Consensus       222 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  258 (260)
T cd05067         222 MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLE  258 (260)
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence            1122334567999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.3e-35  Score=322.50  Aligned_cols=262  Identities=23%  Similarity=0.411  Sum_probs=201.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCc---------------ceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDC---------------TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIG  576 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~---------------~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g  576 (851)
                      ++|++.+.||+|+||.||+++..+.               ..+|+|..... .......|.+|++++++++||||+++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            5788888999999999999875431               24789988764 3444567999999999999999999999


Q ss_pred             EEccCCcEEEEEEecCCcchhhhccCCC----------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeE
Q 047215          577 FCDEQNEMILVYEYMANGTLRSHLFGSD----------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL  646 (851)
Q Consensus       577 ~~~~~~~~~lV~Ey~~~gsL~~~L~~~~----------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NIL  646 (851)
                      ++..++..++||||+++++|.+++....          ...+++.++++++.|++.||.|||+   .+++||||||+||+
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil  161 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNCL  161 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhEE
Confidence            9999999999999999999999885432          1347889999999999999999995   89999999999999


Q ss_pred             EcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhC--CcCCCCCCCcch
Q 047215          647 LDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA--RAVINPTLPKDQ  724 (851)
Q Consensus       647 ld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG--~~p~~~~~~~~~  724 (851)
                      +++++.+||+|||+++...............++..|+|||++....++.++|||||||+++||+++  ..|+......+ 
T Consensus       162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~-  240 (295)
T cd05097         162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ-  240 (295)
T ss_pred             EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH-
Confidence            999999999999998764332222222334457789999999988999999999999999999984  44554332211 


Q ss_pred             hcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          725 INLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       725 ~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                        .............      .......++..+..+.+|+.+||+.+|++||++.+|++.|.
T Consensus       241 --~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         241 --VIENTGEFFRNQG------RQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             --HHHHHHHhhhhcc------ccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence              1111111111100      00111122334567999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=1.6e-35  Score=321.52  Aligned_cols=263  Identities=25%  Similarity=0.415  Sum_probs=204.4

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC-----------------cceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceee
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED-----------------CTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVS  573 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~-----------------~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~  573 (851)
                      ..+|+..+.||+|+||.||+++..+                 ...+++|.+... .....+.+.+|++++++++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            3578888999999999999997643                 235788987754 3445678999999999999999999


Q ss_pred             EEEEEccCCcEEEEEEecCCcchhhhccCCC---------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCC
Q 047215          574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSD---------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTN  644 (851)
Q Consensus       574 l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~---------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~N  644 (851)
                      ++++|..++..++++||+++++|.+++....         ...+++..++.++.|++.||.|||+   .+++||||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~N  160 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhc
Confidence            9999999999999999999999999985432         2368899999999999999999995   899999999999


Q ss_pred             eEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh--CCcCCCCCCCc
Q 047215          645 ILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC--ARAVINPTLPK  722 (851)
Q Consensus       645 ILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt--G~~p~~~~~~~  722 (851)
                      |+++.++.++|+|||+++...............++..|+|||++.+..++.++|||||||++|||++  +..|+..... 
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~-  239 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD-  239 (296)
T ss_pred             eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh-
Confidence            9999999999999999876433332223334556789999999988899999999999999999998  5555543221 


Q ss_pred             chhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          723 DQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       723 ~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                        ..............      ........+..++..+.+++.+||+.||.+|||+.|+++.|+
T Consensus       240 --~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         240 --QQVIENAGHFFRDD------GRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             --HHHHHHHHhccccc------cccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence              11111111111110      111111122344567999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=1.2e-35  Score=325.85  Aligned_cols=260  Identities=24%  Similarity=0.466  Sum_probs=204.9

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc--------CcceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccC
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE--------DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQ  581 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~--------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~  581 (851)
                      .++|.+.+.||+|+||.||+++..        ....+++|.+... .......+..|+++++++ +||||++++++|..+
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            356778899999999999999742        2346788887754 344567789999999999 699999999999999


Q ss_pred             CcEEEEEEecCCcchhhhccCCC--------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE
Q 047215          582 NEMILVYEYMANGTLRSHLFGSD--------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL  647 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl  647 (851)
                      +..+++|||+++|+|.+++....              ...+++.++.+++.|++.||.|||+   .+++||||||+|||+
T Consensus        91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill  167 (314)
T cd05099          91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLV  167 (314)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEE
Confidence            99999999999999999985432              2458899999999999999999994   899999999999999


Q ss_pred             cCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhc
Q 047215          648 DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQIN  726 (851)
Q Consensus       648 d~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~  726 (851)
                      +.++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.|+......+   
T Consensus       168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---  244 (314)
T cd05099         168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE---  244 (314)
T ss_pred             cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH---
Confidence            9999999999999986433221111122234567999999998899999999999999999999 777775432211   


Q ss_pred             HHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          727 LADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       727 l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      +.+    ....+         .....+..++..+.+++.+||+.+|++|||+.++++.|..+..
T Consensus       245 ~~~----~~~~~---------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~  295 (314)
T cd05099         245 LFK----LLREG---------HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA  295 (314)
T ss_pred             HHH----HHHcC---------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence            111    11111         1112234556678999999999999999999999999987754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=6.7e-36  Score=323.14  Aligned_cols=262  Identities=24%  Similarity=0.341  Sum_probs=196.0

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhc---CCcceeeEEEEEcc-----CC
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKL---RHRHLVSLIGFCDE-----QN  582 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l---~HpnIv~l~g~~~~-----~~  582 (851)
                      +|+..+.||+|+||.||+|+.. +++.+|+|.+....  ......+.+|+.+++++   +||||+++++++..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            4778899999999999999865 57789999876432  12223456777777665   69999999998854     34


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      ..++||||+++ +|.+++.......+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg~~~  156 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFGLAR  156 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccCccc
Confidence            58999999985 88888866555568999999999999999999995   899999999999999999999999999987


Q ss_pred             cCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHh--hhccc
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ--KQRSL  740 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~--~~~~~  740 (851)
                      .....   .......||..|+|||++.+..++.++|||||||++|||++|++||......+.  +........  .....
T Consensus       157 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~--~~~~~~~~~~~~~~~~  231 (288)
T cd07863         157 IYSCQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ--LGKIFDLIGLPPEDDW  231 (288)
T ss_pred             cccCc---ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH--HHHHHHHhCCCChhhC
Confidence            64321   112335678999999999988999999999999999999999998865433221  111100000  00000


Q ss_pred             -c------cccCccC---CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 -K------SIIDPHL---KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 -~------~i~d~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       .      ....+..   .....++..+.+.+++.+||+.||++|||+.|++.|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h  285 (288)
T cd07863         232 PRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH  285 (288)
T ss_pred             cccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence             0      0000000   011123455678999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=5.8e-36  Score=330.27  Aligned_cols=249  Identities=22%  Similarity=0.356  Sum_probs=198.6

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      ++||+|+||.||+++.. +++.+|+|++...   .....+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            36999999999999865 5678899988753   233456688999999888 699999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |+|..++...  ..+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++.....  ....
T Consensus        81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~~  153 (327)
T cd05617          81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP--GDTT  153 (327)
T ss_pred             CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCC--CCce
Confidence            9999888543  368999999999999999999995   89999999999999999999999999998752221  1123


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS  753 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  753 (851)
                      ....||+.|+|||++.+..++.++|||||||+||||++|+.||............++........        .  ..++
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--------~--~~~p  223 (327)
T cd05617         154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--------P--IRIP  223 (327)
T ss_pred             ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--------C--CCCC
Confidence            34679999999999999999999999999999999999999996543322222222222211111        1  1123


Q ss_pred             hhHHHHHHHHHHHhcccCCCCCCC------HHHHHHH
Q 047215          754 PESLEKFGEIAEKCLDDEGKNRPT------MGEVLWH  784 (851)
Q Consensus       754 ~~~~~~l~~l~~~Cl~~dP~~RPt------~~evl~~  784 (851)
                      ...+..+.+++.+||+.||.+||+      ++++++|
T Consensus       224 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  260 (327)
T cd05617         224 RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH  260 (327)
T ss_pred             CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence            344566889999999999999998      5688888

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=6e-36  Score=327.39  Aligned_cols=270  Identities=23%  Similarity=0.374  Sum_probs=203.2

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++|...+.||+|+||.||+|+.+ .+..+|+|.+.... ......+.+|++++++++||||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            56888899999999999999865 56778999876542 23334678899999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++ +|.+++.... ..+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++....... 
T Consensus        86 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-  159 (309)
T cd07872          86 LDK-DLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK-  159 (309)
T ss_pred             CCC-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCCcc-
Confidence            985 7777775432 357888999999999999999995   8999999999999999999999999999875322111 


Q ss_pred             ccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHH---------HHhhhccc
Q 047215          671 HVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM---------KWQKQRSL  740 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~---------~~~~~~~~  740 (851)
                       ......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||......+.........         ........
T Consensus       160 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (309)
T cd07872         160 -TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEF  238 (309)
T ss_pred             -ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhh
Confidence             1223457899999998865 468999999999999999999999987654332221111100         00000000


Q ss_pred             ccccCccCCC----CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          741 KSIIDPHLKG----NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       741 ~~i~d~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      ...-.+....    ...+..+..+.+++.+||+.||.+|||++|+++|         +|++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h---------~~~~~  291 (309)
T cd07872         239 KNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH---------AYFRS  291 (309)
T ss_pred             hhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC---------hhhhh
Confidence            0000011000    0112345678899999999999999999999999         77764

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=5.8e-36  Score=329.00  Aligned_cols=242  Identities=25%  Similarity=0.353  Sum_probs=196.5

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      ++||+|+||.||+++.. ++..+|+|.+...   .......+..|+++++.+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36999999999999875 4678899987643   234456678899999888 799999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |+|.+++...  ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++.....  ....
T Consensus        81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~  153 (318)
T cd05570          81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG--GVTT  153 (318)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcC--CCcc
Confidence            9999888544  368999999999999999999995   89999999999999999999999999998752221  1122


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS  753 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  753 (851)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......   .   .....         ...  ..++
T Consensus       154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~---~---~~~i~---------~~~--~~~~  216 (318)
T cd05570         154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE---L---FQSIL---------EDE--VRYP  216 (318)
T ss_pred             cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH---H---HHHHH---------cCC--CCCC
Confidence            34568999999999999999999999999999999999999986543211   1   11111         000  1123


Q ss_pred             hhHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 047215          754 PESLEKFGEIAEKCLDDEGKNRPTM-----GEVLWH  784 (851)
Q Consensus       754 ~~~~~~l~~l~~~Cl~~dP~~RPt~-----~evl~~  784 (851)
                      ...+..+.+++.+||+.||.+||++     .++++|
T Consensus       217 ~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         217 RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence            3445678999999999999999999     999888

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=4.4e-36  Score=329.57  Aligned_cols=242  Identities=24%  Similarity=0.359  Sum_probs=192.5

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      ++||+|+||.||+|+.. .+..+|+|.+...   .....+.+..|..++..+ +||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36999999999999875 4678999987643   223344556677777654 899999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++......  ...
T Consensus        81 g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~  153 (316)
T cd05592          81 GDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKA  153 (316)
T ss_pred             CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--Ccc
Confidence            9999988543  358889999999999999999995   899999999999999999999999999987532211  223


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS  753 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  753 (851)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+      .......           ....++
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~------~~~~i~~-----------~~~~~~  216 (316)
T cd05592         154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE------LFDSILN-----------DRPHFP  216 (316)
T ss_pred             ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH------HHHHHHc-----------CCCCCC
Confidence            44679999999999999999999999999999999999999987543211      1111100           011223


Q ss_pred             hhHHHHHHHHHHHhcccCCCCCCCHH-HHHHH
Q 047215          754 PESLEKFGEIAEKCLDDEGKNRPTMG-EVLWH  784 (851)
Q Consensus       754 ~~~~~~l~~l~~~Cl~~dP~~RPt~~-evl~~  784 (851)
                      ...+..+.+++.+||+.+|.+||++. ++++|
T Consensus       217 ~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h  248 (316)
T cd05592         217 RWISKEAKDCLSKLFERDPTKRLGVDGDIRQH  248 (316)
T ss_pred             CCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence            34456688999999999999999875 66676

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.6e-35  Score=338.38  Aligned_cols=262  Identities=21%  Similarity=0.228  Sum_probs=196.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ...|.+.+.||+|+||.||++.... ++.|+||....      ..+.+|+++|++++|||||++++++..++..++|||+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            4578999999999999999998754 56789996432      3457899999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +. ++|.+++.... ..++|.+++.++.|+++||.|||+   .+||||||||+|||++.++.+||+|||+++........
T Consensus       242 ~~-~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~  316 (461)
T PHA03211        242 YR-SDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST  316 (461)
T ss_pred             cC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence            95 68888875432 368999999999999999999995   89999999999999999999999999999764332222


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCC--cchh---cHHHHHHHHhhh-ccccc--
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP--KDQI---NLADWAMKWQKQ-RSLKS--  742 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~--~~~~---~l~~~~~~~~~~-~~~~~--  742 (851)
                      .......||..|+|||++.+..++.++|||||||+||||++|..++.....  ....   .+.......... .....  
T Consensus       317 ~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~  396 (461)
T PHA03211        317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA  396 (461)
T ss_pred             ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence            223346799999999999999999999999999999999998876543211  1111   111111110000 00000  


Q ss_pred             --------------ccCccCCC-CCC--hhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          743 --------------IIDPHLKG-NYS--PESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       743 --------------i~d~~l~~-~~~--~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                                    ...+.... ...  ......+.+|+.+||+.||.+|||+.|+|+|
T Consensus       397 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        397 GSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             chHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence                          00000000 000  0123468899999999999999999999999

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=5.4e-36  Score=328.90  Aligned_cols=242  Identities=26%  Similarity=0.388  Sum_probs=193.4

Q ss_pred             eeeeeecceEEEEEEEcC-cceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIED-CTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      +.||+|+||.||+|+..+ +..+|+|.+...   .......+..|..++..+ +||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            369999999999998754 678999987653   123345567788888764 899999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |+|.+++...  ..+++.++..++.|++.||+|||+   .+++||||||+|||++.++.+||+|||+++......  ...
T Consensus        81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~  153 (316)
T cd05619          81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD--AKT  153 (316)
T ss_pred             CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC--Cce
Confidence            9999998543  458899999999999999999995   899999999999999999999999999987522111  122


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS  753 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  753 (851)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+   +.+   ... .      ..+.    ++
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~~~---~i~-~------~~~~----~~  216 (316)
T cd05619         154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE---LFQ---SIR-M------DNPC----YP  216 (316)
T ss_pred             eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH---HHH---HHH-h------CCCC----CC
Confidence            34568999999999999999999999999999999999999987543211   111   110 0      0111    22


Q ss_pred             hhHHHHHHHHHHHhcccCCCCCCCHH-HHHHH
Q 047215          754 PESLEKFGEIAEKCLDDEGKNRPTMG-EVLWH  784 (851)
Q Consensus       754 ~~~~~~l~~l~~~Cl~~dP~~RPt~~-evl~~  784 (851)
                      ......+.+++.+||+.||.+||++. ++++|
T Consensus       217 ~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h  248 (316)
T cd05619         217 RWLTREAKDILVKLFVREPERRLGVKGDIRQH  248 (316)
T ss_pred             ccCCHHHHHHHHHHhccCHhhcCCChHHHHcC
Confidence            23445688999999999999999996 77777

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=5.3e-36  Score=343.20  Aligned_cols=263  Identities=21%  Similarity=0.248  Sum_probs=194.4

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC--------
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ--------  581 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--------  581 (851)
                      ...+|...++||+|+||.||+|... .+..+|||++....    ....+|+.+|++++||||+++++++...        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            4567999999999999999999874 56789999875432    2345799999999999999999876321        


Q ss_pred             CcEEEEEEecCCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC-eEEEeec
Q 047215          582 NEMILVYEYMANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF-VAKMSDF  658 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~-~~kl~DF  658 (851)
                      ..+++||||+++ +|.+++..  .....+++..+..++.|++.||+|||+   .+|+||||||+|||++.++ .+||+||
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DF  215 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDF  215 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeecc
Confidence            246799999985 66665532  234568899999999999999999995   8999999999999998654 7999999


Q ss_pred             cccccCCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh
Q 047215          659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ  737 (851)
Q Consensus       659 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~  737 (851)
                      |+++......   ......||+.|+|||++.+ ..++.++|||||||+||||++|++||......+..............
T Consensus       216 Gla~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~  292 (440)
T PTZ00036        216 GSAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE  292 (440)
T ss_pred             ccchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            9998643221   1233568999999999865 47999999999999999999999999765433221111000000000


Q ss_pred             -------cccccc-----cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          738 -------RSLKSI-----IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       738 -------~~~~~i-----~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                             .....+     ....+...++...+..+.+|+.+||+.||.+|||+.|+++|
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h  351 (440)
T PTZ00036        293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD  351 (440)
T ss_pred             HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence                   000000     01111112333455679999999999999999999999999

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=2.3e-35  Score=314.32  Aligned_cols=253  Identities=28%  Similarity=0.432  Sum_probs=202.5

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecC
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      ++|...+.||+|++|.||+|..+++..+++|+..... ...+.+.+|++++++++|||++++++++.. +..+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~   83 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMG   83 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCC
Confidence            4577888999999999999998877778999876543 234678899999999999999999998854 56899999999


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccc
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~  672 (851)
                      +|+|.+++.......+++..+..++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++....... ..
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~-~~  159 (260)
T cd05069          84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY-TA  159 (260)
T ss_pred             CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCcc-cc
Confidence            9999999976555568999999999999999999994   8999999999999999999999999999875432111 11


Q ss_pred             ccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      .....++..|+|||.+.+..++.++||||||+++|||++ |+.|+....+.+   ...+   .. ..         ....
T Consensus       160 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~---~~-~~---------~~~~  223 (260)
T cd05069         160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE---VLEQ---VE-RG---------YRMP  223 (260)
T ss_pred             cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH---HH-cC---------CCCC
Confidence            122345678999999998899999999999999999999 888876543211   1111   10 00         1112


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      .+...+..+.+++.+||+.+|.+||+++++++.|+.
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         224 CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            233456779999999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=5e-36  Score=321.19  Aligned_cols=254  Identities=27%  Similarity=0.398  Sum_probs=201.2

Q ss_pred             HHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccC------
Q 047215          510 VATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQ------  581 (851)
Q Consensus       510 ~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~------  581 (851)
                      .+++.|+..+.||+|+||.||+|... .+..+|+|...... .....+.+|+.+++++ +||||+++++++...      
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            35677888889999999999999865 46778999876543 3346788999999999 799999999998642      


Q ss_pred             CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccc
Q 047215          582 NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla  661 (851)
                      ...+++|||+++|+|.+++.......+++..+..++.|++.||+|||+   .+|+||||||+||++++++.+||+|||++
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg~~  158 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVS  158 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCCCc
Confidence            468999999999999999876555678999999999999999999995   89999999999999999999999999998


Q ss_pred             ccCCCCCccccccccccCCcccCccccc-----ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFW-----RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK  736 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~  736 (851)
                      +.....  ........|+..|+|||++.     ...++.++|||||||++|||++|+.|+....+....     .. .. 
T Consensus       159 ~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~-----~~-~~-  229 (272)
T cd06637         159 AQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL-----FL-IP-  229 (272)
T ss_pred             eecccc--cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHH-----HH-Hh-
Confidence            753221  11233456899999999986     346888999999999999999999988654322111     00 00 


Q ss_pred             hcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       737 ~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .     ...+.+   ....++..+.+++.+||+.+|.+|||+.++++|
T Consensus       230 ~-----~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  269 (272)
T cd06637         230 R-----NPAPRL---KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH  269 (272)
T ss_pred             c-----CCCCCC---CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence            0     001111   112344578999999999999999999999999

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=3.4e-36  Score=331.26  Aligned_cols=242  Identities=23%  Similarity=0.321  Sum_probs=196.1

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      ++||+|+||.||+|+.. .++.+|+|.+...   .......+..|.+++..+ +||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            36999999999999875 4678999987653   234455678899999876 799999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |+|...+...  ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++......  ...
T Consensus        81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~  153 (321)
T cd05591          81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--VTT  153 (321)
T ss_pred             CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCC--ccc
Confidence            9999888543  358899999999999999999995   899999999999999999999999999987532211  123


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS  753 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  753 (851)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||....+.+   +   ......         ..  ..++
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~---~---~~~i~~---------~~--~~~p  216 (321)
T cd05591         154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD---L---FESILH---------DD--VLYP  216 (321)
T ss_pred             cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH---H---HHHHHc---------CC--CCCC
Confidence            34568999999999999999999999999999999999999997543221   1   111110         00  0122


Q ss_pred             hhHHHHHHHHHHHhcccCCCCCC-------CHHHHHHH
Q 047215          754 PESLEKFGEIAEKCLDDEGKNRP-------TMGEVLWH  784 (851)
Q Consensus       754 ~~~~~~l~~l~~~Cl~~dP~~RP-------t~~evl~~  784 (851)
                      ...+..+.+++.+||+.||++||       +++++++|
T Consensus       217 ~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         217 VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence            23456689999999999999999       89999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=2.1e-35  Score=312.30  Aligned_cols=246  Identities=27%  Similarity=0.441  Sum_probs=198.6

Q ss_pred             eeeeecceEEEEEEEcCcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcchhh
Q 047215          520 MIGVGGFGKVFKGEIEDCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS  598 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~~  598 (851)
                      +||+|+||.||+|...++..+++|...... ......+.+|++++++++||||++++++|...+..++||||+++++|.+
T Consensus         2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   81 (250)
T cd05085           2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS   81 (250)
T ss_pred             ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence            689999999999998888899999887653 3334578899999999999999999999999999999999999999999


Q ss_pred             hccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccccccccc
Q 047215          599 HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG  678 (851)
Q Consensus       599 ~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~g  678 (851)
                      ++.... ..+++.++..++.|++.+|.|||+   .+++||||||+||+++.++.+||+|||+++...... ........+
T Consensus        82 ~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~  156 (250)
T cd05085          82 FLRKKK-DELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI-YSSSGLKQI  156 (250)
T ss_pred             HHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccc-cccCCCCCC
Confidence            886543 457899999999999999999994   899999999999999999999999999987532211 111122234


Q ss_pred             CCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHH
Q 047215          679 SFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESL  757 (851)
Q Consensus       679 t~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~  757 (851)
                      +..|+|||++.+..++.++||||||+++||+++ |..||.......   ..   ... ..         ......+..++
T Consensus       157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~---~~---~~~-~~---------~~~~~~~~~~~  220 (250)
T cd05085         157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ---AR---EQV-EK---------GYRMSCPQKCP  220 (250)
T ss_pred             cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH---HH---HHH-Hc---------CCCCCCCCCCC
Confidence            678999999998999999999999999999998 888876442211   10   010 01         11112334456


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          758 EKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       758 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      ..+.+++.+|++.+|++||++.++++.|.
T Consensus       221 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         221 DDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            78999999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=1.1e-35  Score=325.36  Aligned_cols=260  Identities=25%  Similarity=0.334  Sum_probs=202.0

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++|+..+.||+|+||.||++... .+..+++|.+... .......+.+|++++++++||||++++++|..++..++||||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            46888999999999999999865 4667788877654 334456788999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++...  ..+++..+..++.|+++||.|||+  ..+++||||||+|||++.++.+||+|||++......   
T Consensus        81 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---  153 (308)
T cd06615          81 MDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---  153 (308)
T ss_pred             cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCccccccc---
Confidence            9999999999654  468899999999999999999995  468999999999999999999999999998753221   


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcc-----------
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS-----------  739 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~-----------  739 (851)
                       ......|+..|+|||++.+..++.++||||||+++|||++|+.|+.......   ...+.........           
T Consensus       154 -~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  229 (308)
T cd06615         154 -MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE---LEAMFGRPVSEGEAKESHRPVSGH  229 (308)
T ss_pred             -ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh---HHHhhcCccccccccCCcccccCC
Confidence             1234568899999999988889999999999999999999999986433211   1110000000000           


Q ss_pred             -------------cccccCccCCCCCC-hhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          740 -------------LKSIIDPHLKGNYS-PESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       740 -------------~~~i~d~~l~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                                   ...+... .....+ ......+.+++.+||+.+|++|||++++++|
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         230 PPDSPRPMAIFELLDYIVNE-PPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             CCCccchhhHHHHHHHHhcC-CCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                         0000000 000111 1234568999999999999999999999999

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=1.1e-35  Score=317.75  Aligned_cols=254  Identities=24%  Similarity=0.382  Sum_probs=202.3

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      ++|+..+.||+|+||.||+|+. .++..+++|+...........+.+|+.++++++||||+++++++..++..++|+||+
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~   88 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC   88 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence            5688889999999999999986 467788999887655555667889999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++++|.+++...  .++++.++..++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||+++......  .
T Consensus        89 ~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~--~  161 (267)
T cd06646          89 GGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI--A  161 (267)
T ss_pred             CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeecccc--c
Confidence            999999988543  468899999999999999999995   899999999999999999999999999987543211  1


Q ss_pred             cccccccCCcccCccccc---ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          672 VSTAVKGSFGYLDPEYFW---RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~---~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                      ......|+..|+|||.+.   ...++.++|||||||++|||++|+.|+....+.....      ..    .......+..
T Consensus       162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~------~~----~~~~~~~~~~  231 (267)
T cd06646         162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF------LM----SKSNFQPPKL  231 (267)
T ss_pred             ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe------ee----ecCCCCCCCC
Confidence            123346888999999884   4457889999999999999999999885433221100      00    0000111111


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                      .  .....+..+.+++.+||+.+|++|||++++++||
T Consensus       232 ~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         232 K--DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             c--cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            1  1123456789999999999999999999999884

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-35  Score=313.88  Aligned_cols=250  Identities=28%  Similarity=0.460  Sum_probs=205.4

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .++|+..+.||+|+||.||+|... ++.+++|.+..... ..+.+.+|+.++++++|+||+++++++...+..++||||+
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   82 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM   82 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence            356788889999999999999865 57789999876544 5678899999999999999999999999899999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++++|.+++.......+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++......   
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~---  156 (256)
T cd05039          83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ---  156 (256)
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEccccccccccccc---
Confidence            99999999976655578999999999999999999994   899999999999999999999999999988642211   


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                        .....+..|+|||++....++.++||||||++++|+++ |+.|+......+   +....    ..         ....
T Consensus       157 --~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~----~~---------~~~~  218 (256)
T cd05039         157 --DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPHV----EK---------GYRM  218 (256)
T ss_pred             --ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHH----hc---------CCCC
Confidence              12334668999999988899999999999999999997 888876442211   11110    00         1111


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      ..+...++.+.+++.+||+.+|++||++.++++.|..
T Consensus       219 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         219 EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence            2233456778999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=2.6e-35  Score=315.55  Aligned_cols=252  Identities=24%  Similarity=0.342  Sum_probs=192.5

Q ss_pred             eeeeecceEEEEEEEcCc---ceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcc
Q 047215          520 MIGVGGFGKVFKGEIEDC---TLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT  595 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~~~---~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gs  595 (851)
                      .||+|+||.||+|...++   ..+++|++.... ......+.+|+.++++++||||+++++++......++||||+++|+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD   81 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence            589999999999986543   467888876543 3344578899999999999999999999999999999999999999


Q ss_pred             hhhhccCCC---CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccc
Q 047215          596 LRSHLFGSD---LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       596 L~~~L~~~~---~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~  672 (851)
                      |.+++....   ....++..+.+++.|+++||+|||+   .+++||||||+||+++.++.+||+|||+++..........
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~  158 (269)
T cd05087          82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT  158 (269)
T ss_pred             HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence            999986432   2345677888999999999999995   8999999999999999999999999999875332222122


Q ss_pred             ccccccCCcccCccccccc-------CCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          673 STAVKGSFGYLDPEYFWRQ-------QLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~~-------~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      .....++..|+|||++.+.       .++.++||||||+++|||++ |+.||....+.+.   ..    ....+....+.
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~---~~----~~~~~~~~~~~  231 (269)
T cd05087         159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV---LT----YTVREQQLKLP  231 (269)
T ss_pred             CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH---HH----HHhhcccCCCC
Confidence            2334578899999998642       36889999999999999996 9888865432211   11    11111112222


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      ++.+.    ....+.+.+++..|+ .+|++|||++||+..|+
T Consensus       232 ~~~~~----~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         232 KPRLK----LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCccC----CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            23222    234456888999998 58999999999998764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=8.1e-36  Score=328.57  Aligned_cols=247  Identities=23%  Similarity=0.329  Sum_probs=198.4

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      +|+..+.||+|+||.||+|+.. ++..+|+|.+...   .......+..|..++..+ +||+|+++++++...+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            4778899999999999999875 4568899987653   223345567788888877 5899999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+.+...  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++..... 
T Consensus        81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~-  154 (323)
T cd05616          81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD-  154 (323)
T ss_pred             cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecCCC-
Confidence            999999999988543  358899999999999999999995   89999999999999999999999999998753211 


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                       ........||+.|+|||++.+..++.++|||||||++|||++|+.||.......   +.   ...         .... 
T Consensus       155 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~---~~---~~i---------~~~~-  217 (323)
T cd05616         155 -GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LF---QSI---------MEHN-  217 (323)
T ss_pred             -CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH---HH---HHH---------HhCC-
Confidence             112234579999999999999999999999999999999999999987543221   11   111         1111 


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTM-----GEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~evl~~  784 (851)
                       ..++...+..+.+++.+||+.+|.+|++.     .++++|
T Consensus       218 -~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05616         218 -VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  257 (323)
T ss_pred             -CCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence             12233455678999999999999999984     777777

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=2.7e-36  Score=339.52  Aligned_cols=253  Identities=21%  Similarity=0.299  Sum_probs=198.4

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+++.. .++.+|+|.+....   ......+.+|+++|++++||||+++++.+..++.+++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            36889999999999999999864 56789999876432   233466889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||++.......
T Consensus        81 E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~  155 (376)
T cd05598          81 DYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH  155 (376)
T ss_pred             eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence            999999999998554  357888889999999999999995   899999999999999999999999999974211000


Q ss_pred             -----------------------------------------ccccccccccCCcccCcccccccCCCchHHHHHHHHHHH
Q 047215          669 -----------------------------------------HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF  707 (851)
Q Consensus       669 -----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~  707 (851)
                                                               .........||+.|+|||++.+..++.++|||||||++|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily  235 (376)
T cd05598         156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY  235 (376)
T ss_pred             cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence                                                     000012356999999999999999999999999999999


Q ss_pred             HHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCC---CHHHHHHH
Q 047215          708 EVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRP---TMGEVLWH  784 (851)
Q Consensus       708 eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---t~~evl~~  784 (851)
                      ||++|+.||....+.+..      .......       ..+........+..+.+++.+|+ .+|.+|+   ++.|+++|
T Consensus       236 ell~G~~Pf~~~~~~~~~------~~i~~~~-------~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         236 EMLVGQPPFLADTPAETQ------LKVINWE-------TTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             ehhhCCCCCCCCCHHHHH------HHHhccC-------ccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            999999999765432211      1100000       00111111234456778888876 4999999   99999999

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.2e-35  Score=321.22  Aligned_cols=251  Identities=24%  Similarity=0.356  Sum_probs=201.7

Q ss_pred             CceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          515 FDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      |+..++||+|+||.||++... .++.+|+|.+....   ......+..|+.++++++|++++++++.+..++..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            667789999999999999865 56789999876432   22334577899999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++.......+++.++..++.|++.||.|||+   .+++||||||+||+++.++.++|+|||++.......  
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--  156 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--  156 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--
Confidence            999999999865555568999999999999999999995   999999999999999999999999999987533211  


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                       ......|+..|+|||++.+..++.++|||||||++|||++|+.||............   ....     ..     ...
T Consensus       157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~---~~~~-----~~-----~~~  222 (285)
T cd05630         157 -TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV---ERLV-----KE-----VQE  222 (285)
T ss_pred             -cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHH---Hhhh-----hh-----hhh
Confidence             112346899999999999999999999999999999999999999754322110000   0000     00     001


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPT-----MGEVLWH  784 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  784 (851)
                      .++...+..+.+|+.+||+.||++|||     ++|+++|
T Consensus       223 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h  261 (285)
T cd05630         223 EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH  261 (285)
T ss_pred             hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence            122334556899999999999999999     8999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=3.7e-36  Score=339.16  Aligned_cols=252  Identities=22%  Similarity=0.306  Sum_probs=196.7

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      +|+..++||+|+||.||+|+.. .++.+|+|++...   .......+.+|+.++++++||||+++++.+..++..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            5888999999999999999864 5678899988653   23345678899999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC-
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME-  668 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~-  668 (851)
                      |+++|+|.+++...  ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++...... 
T Consensus        82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~  156 (382)
T cd05625          82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD  156 (382)
T ss_pred             CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence            99999999998554  357888899999999999999995   899999999999999999999999999975211000 


Q ss_pred             --------------------------------------------ccccccccccCCcccCcccccccCCCchHHHHHHHH
Q 047215          669 --------------------------------------------HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGV  704 (851)
Q Consensus       669 --------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~Gv  704 (851)
                                                                  .........||+.|+|||++.+..++.++|||||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv  236 (382)
T cd05625         157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV  236 (382)
T ss_pred             ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence                                                        000112346999999999999999999999999999


Q ss_pred             HHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCC---HHHH
Q 047215          705 VLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT---MGEV  781 (851)
Q Consensus       705 vL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt---~~ev  781 (851)
                      +||||++|+.||....+.+.      .......       ...+........++.+.+++.+|+ .+|.+|++   ++|+
T Consensus       237 il~elltG~~Pf~~~~~~~~------~~~i~~~-------~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei  302 (382)
T cd05625         237 ILYEMLVGQPPFLAQTPLET------QMKVINW-------QTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEI  302 (382)
T ss_pred             HHHHHHhCCCCCCCCCHHHH------HHHHHcc-------CCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHH
Confidence            99999999999976543211      0110000       001111111223455777777766 49999997   9999


Q ss_pred             HHH
Q 047215          782 LWH  784 (851)
Q Consensus       782 l~~  784 (851)
                      ++|
T Consensus       303 ~~h  305 (382)
T cd05625         303 KAH  305 (382)
T ss_pred             hcC
Confidence            998

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1e-36  Score=317.60  Aligned_cols=260  Identities=25%  Similarity=0.332  Sum_probs=199.4

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC--C---cEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ--N---EMILV  587 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--~---~~~lV  587 (851)
                      .|...+++|.|+||.||+|.+. .+..+|||+.-...+.    -.+|+++|++++|||||+|+-++...  +   ...+|
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            4556789999999999999875 4588999987655432    24699999999999999999887432  2   34699


Q ss_pred             EEecCCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCC-CeEEEeeccccccC
Q 047215          588 YEYMANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN-FVAKMSDFGLSKTG  664 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~-~~~kl~DFGla~~~  664 (851)
                      |||||. +|.+.++.  .....++...+.-...|+.+||.|||+   .+|+||||||.|+|+|.+ |.+||||||.|+..
T Consensus       101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L  176 (364)
T KOG0658|consen  101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL  176 (364)
T ss_pred             HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence            999997 89888863  224567778888899999999999995   999999999999999965 99999999999975


Q ss_pred             CCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc--
Q 047215          665 PSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK--  741 (851)
Q Consensus       665 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~--  741 (851)
                      ...+.+   .....|..|.|||.+.+ ..|+.+.||||.|||+.||+-|++.|.+....++....-.+......+.+.  
T Consensus       177 ~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m  253 (364)
T KOG0658|consen  177 VKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM  253 (364)
T ss_pred             ccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence            443332   33456889999999875 589999999999999999999999998876666543332222111111111  


Q ss_pred             -----cccCccCCC-----CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          742 -----SIIDPHLKG-----NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       742 -----~i~d~~l~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                           +...|.+..     -+....+++..+|+.++|+.+|.+|.++.|++.|
T Consensus       254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH  306 (364)
T ss_pred             CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence                 111122211     1334566779999999999999999999999999

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-35  Score=311.33  Aligned_cols=263  Identities=24%  Similarity=0.373  Sum_probs=198.0

Q ss_pred             HHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHH--hcCCcceeeEEEEEccC----Cc
Q 047215          510 VATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLS--KLRHRHLVSLIGFCDEQ----NE  583 (851)
Q Consensus       510 ~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~--~l~HpnIv~l~g~~~~~----~~  583 (851)
                      .........+.||+|.||+||+|++.+ ..||||++...++..   +.+|.++.+  .|+|+||+.+++.-..+    .+
T Consensus       208 TiarqI~L~e~IGkGRyGEVwrG~wrG-e~VAVKiF~srdE~S---WfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ  283 (513)
T KOG2052|consen  208 TIARQIVLQEIIGKGRFGEVWRGRWRG-EDVAVKIFSSRDERS---WFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ  283 (513)
T ss_pred             hhhheeEEEEEecCccccceeeccccC-CceEEEEecccchhh---hhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence            344667778899999999999999986 457999998776554   445555555  46999999999886443    47


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhc-----CCCCCeEEcCCCCCCeEEcCCCeEEEeec
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHT-----GAERGIIHRDVKTTNILLDENFVAKMSDF  658 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs-----~~~~~iiHrDlk~~NILld~~~~~kl~DF  658 (851)
                      +|||.+|.++|||.|+|..   ..++....+++++.+|.||+|||.     ..++.|.|||||++||||..++.+.|+|+
T Consensus       284 LwLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL  360 (513)
T KOG2052|consen  284 LWLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL  360 (513)
T ss_pred             EEEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence            8999999999999999955   458999999999999999999994     35777999999999999999999999999


Q ss_pred             cccccCCCCC--ccccccccccCCcccCcccccccC----C--CchHHHHHHHHHHHHHHhCC----------cCCCCCC
Q 047215          659 GLSKTGPSME--HTHVSTAVKGSFGYLDPEYFWRQQ----L--TEKSDVYSFGVVLFEVVCAR----------AVINPTL  720 (851)
Q Consensus       659 Gla~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~----~--t~ksDVwS~GvvL~eLltG~----------~p~~~~~  720 (851)
                      |||.......  ..-......||.+|||||++...-    +  -..+||||||.|+||+....          .||.+..
T Consensus       361 GLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~V  440 (513)
T KOG2052|consen  361 GLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVV  440 (513)
T ss_pred             eeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCC
Confidence            9996533321  111223457999999999996431    1  13589999999999996543          3444433


Q ss_pred             CcchhcHHHHHHHHhhhcccccc-cCccCCCCC-----ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          721 PKDQINLADWAMKWQKQRSLKSI-IDPHLKGNY-----SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       721 ~~~~~~l~~~~~~~~~~~~~~~i-~d~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      +.+. +.          +.+.++ ...++++.+     +.+++..+.++++.||..+|..|-|+-.+-+.|.++.+
T Consensus       441 p~DP-s~----------eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  441 PSDP-SF----------EEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             CCCC-CH----------HHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            3221 11          111111 122333322     35788899999999999999999999888877776653

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=2.4e-35  Score=313.81  Aligned_cols=247  Identities=24%  Similarity=0.389  Sum_probs=195.8

Q ss_pred             eeeeecceEEEEEEEc---CcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcc
Q 047215          520 MIGVGGFGKVFKGEIE---DCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT  595 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~---~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gs  595 (851)
                      .||+|+||.||+|.+.   .+..+|+|...... ....+.+.+|+.++++++||||++++++|.. ...++||||+++|+
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence            3899999999999764   34468999887653 3445679999999999999999999999864 57899999999999


Q ss_pred             hhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc-cccc
Q 047215          596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT-HVST  674 (851)
Q Consensus       596 L~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~-~~~~  674 (851)
                      |.+++.... ..+++.++++++.|++.||.|||+   ++++||||||+|||++.++.+||+|||+++........ ....
T Consensus        81 L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  156 (257)
T cd05115          81 LNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS  156 (257)
T ss_pred             HHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccC
Confidence            999986432 468999999999999999999995   89999999999999999999999999998753322111 1112


Q ss_pred             ccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCC
Q 047215          675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS  753 (851)
Q Consensus       675 ~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  753 (851)
                      ...++..|+|||++....++.++|||||||++|||++ |+.|+....+.+      +.. ....+         .....+
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~------~~~-~~~~~---------~~~~~~  220 (257)
T cd05115         157 AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE------VMS-FIEQG---------KRLDCP  220 (257)
T ss_pred             CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH------HHH-HHHCC---------CCCCCC
Confidence            2234578999999988889999999999999999996 888886543221      111 11111         112234


Q ss_pred             hhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          754 PESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       754 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      ..+++.+.+++.+||+.+|++||++.++.+.|+.
T Consensus       221 ~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~  254 (257)
T cd05115         221 AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRT  254 (257)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence            4566789999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=2.9e-35  Score=314.39  Aligned_cols=258  Identities=22%  Similarity=0.337  Sum_probs=206.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+|+.. +++.++||.+...   .......+.+|++++++++||||+++++++...+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            47888899999999999999864 6788899976542   3344567899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          589 EYMANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       589 Ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||+++|+|.+++..  .....+++.++..++.|+++||.|||+   .+++||||||+||+++.++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~  158 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence            99999999988743  223457889999999999999999994   8999999999999999999999999999876432


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      ..  .......|++.|+|||.+.+..++.++|+||||+++|||++|+.|+......    ..++......      ...+
T Consensus       159 ~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~----~~~~~~~~~~------~~~~  226 (267)
T cd08228         159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LFSLCQKIEQ------CDYP  226 (267)
T ss_pred             hh--HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc----HHHHHHHHhc------CCCC
Confidence            11  1123346888999999999888999999999999999999999998643221    1111111110      1111


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      .   ......+..+.+++.+||+.+|++||++.++++.|+.+
T Consensus       227 ~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         227 P---LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             C---CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            1   11234556799999999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-35  Score=328.15  Aligned_cols=257  Identities=21%  Similarity=0.314  Sum_probs=215.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCCh---hhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSE---QGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~l  586 (851)
                      ...|+..+.||+|.||.||+++.+. ++.+|+|.+.....   .....+.+|+.+|+++. |||||.+.+.++..+..++
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l  113 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL  113 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence            4567777899999999999999765 88899998876533   34568999999999998 9999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC----CCeEEEeeccccc
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE----NFVAKMSDFGLSK  662 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~----~~~~kl~DFGla~  662 (851)
                      |||++.+|.|.+.+...   .+++.....++.|++.+++|||+   .+|+||||||+|+|+..    ++.+|++|||++.
T Consensus       114 vmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~  187 (382)
T KOG0032|consen  114 VMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK  187 (382)
T ss_pred             EEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence            99999999999998665   39999999999999999999995   99999999999999952    3589999999998


Q ss_pred             cCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      ....   .......+||+.|+|||++....|+..+||||+||++|.|++|..||..........       ....+    
T Consensus       188 ~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-------~i~~~----  253 (382)
T KOG0032|consen  188 FIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-------AILRG----  253 (382)
T ss_pred             EccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-------HHHcC----
Confidence            7544   334567899999999999999999999999999999999999999998765432211       00011    


Q ss_pred             ccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       743 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                        +........+.....+++++..|+..||.+|+|+.++|+|         +|....
T Consensus       254 --~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H---------pWi~~~  299 (382)
T KOG0032|consen  254 --DFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH---------PWIKSI  299 (382)
T ss_pred             --CCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC---------ccccCC
Confidence              1122233345667889999999999999999999999999         887754

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=4.7e-36  Score=313.55  Aligned_cols=265  Identities=23%  Similarity=0.314  Sum_probs=202.3

Q ss_pred             CCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChh--hHHHHHHHHHHHHhcCCcc-eeeEEEEEccCC------c
Q 047215          514 NFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQ--GLAEFETEIEMLSKLRHRH-LVSLIGFCDEQN------E  583 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~Hpn-Iv~l~g~~~~~~------~  583 (851)
                      .|+..++||+|+||+||+|+. ..++.||+|++......  ......+|+.+|++|+|+| ||+|.+++...+      .
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence            455566799999999999985 46789999998765432  3345689999999999999 999999998877      7


Q ss_pred             EEEEEEecCCcchhhhccCCCC--CCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDL--PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~--~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla  661 (851)
                      ++||+||++. +|..++.....  ..++...+..++.|+++||+|||+   ++|+||||||.||||+++|.+||+|||+|
T Consensus        92 l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGlA  167 (323)
T KOG0594|consen   92 LYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGLA  167 (323)
T ss_pred             EEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccchH
Confidence            8999999976 88888855432  356668899999999999999995   99999999999999999999999999999


Q ss_pred             ccCCCCCccccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL  740 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  740 (851)
                      +...-..  ...+...+|..|.|||++.+. .|+...||||+||++.||+++++.|.+..+.++...+-...........
T Consensus       168 ra~~ip~--~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~W  245 (323)
T KOG0594|consen  168 RAFSIPM--RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDW  245 (323)
T ss_pred             HHhcCCc--ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCC
Confidence            9643222  224456789999999999876 7999999999999999999999988877664443222111111111111


Q ss_pred             cccc-CccCCCC---------CCh---hHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 KSII-DPHLKGN---------YSP---ESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 ~~i~-d~~l~~~---------~~~---~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..+. -+.....         ...   .......+++.+||+.+|.+|.|++.++.|
T Consensus       246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence            1100 0111101         111   112478899999999999999999999999

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-35  Score=314.78  Aligned_cols=255  Identities=30%  Similarity=0.474  Sum_probs=207.4

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ..++|.+.++||+|+||.||+|..+++..+++|.+.... ...+++.+|+.++++++||||+++++++..+...++||||
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY   82 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence            457888899999999999999998887889999887543 3356789999999999999999999999998999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++.......+++.++..++.+++.||.|||+   .+++|+||||+||++++++.+||+|||+++...... .
T Consensus        83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-~  158 (261)
T cd05034          83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE-Y  158 (261)
T ss_pred             cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccchh-h
Confidence            999999999977655678999999999999999999994   899999999999999999999999999987643211 1


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                      .......++..|+|||.+.+..++.++||||||++++||++ |+.|+.......   ..+   ...          ....
T Consensus       159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~---~~~----------~~~~  222 (261)
T cd05034         159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE---VLE---QVE----------RGYR  222 (261)
T ss_pred             hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH---HHH----------cCCC
Confidence            11122334568999999998899999999999999999999 888875432211   111   110          0011


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      ...+...+..+.+++.+||+.+|.+||+++++++.|+
T Consensus       223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~  259 (261)
T cd05034         223 MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLE  259 (261)
T ss_pred             CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHh
Confidence            1222344567999999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=3.4e-35  Score=316.50  Aligned_cols=255  Identities=22%  Similarity=0.305  Sum_probs=202.3

Q ss_pred             CCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          514 NFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      +|+..++||+|+||.||+|.. ..+..+|+|..... .......+.+|++++++++||||+++++++..++..++||||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            577788999999999999985 46678999987654 3444567899999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++++|..+.      .+++..+..++.|++.||.|||+   .+++|+||||+|||++.++.+||+|||++......    
T Consensus        82 ~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~----  148 (279)
T cd06619          82 DGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS----  148 (279)
T ss_pred             CCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc----
Confidence            999996542      46788889999999999999995   89999999999999999999999999998753221    


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchh-cHHHHHHHHhhhcccccccCccCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI-NLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~-~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      ......|+..|+|||++.+..++.++||||||+++|||++|+.||......... ....+...... .     ..+.+. 
T Consensus       149 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~-  221 (279)
T cd06619         149 IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVD-E-----DPPVLP-  221 (279)
T ss_pred             cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhc-c-----CCCCCC-
Confidence            123456899999999999999999999999999999999999998653322111 11111111000 0     011111 


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                        ....+..+.+++.+||+.+|.+||+++|+++|         +|+...
T Consensus       222 --~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~---------~~~~~~  259 (279)
T cd06619         222 --VGQFSEKFVHFITQCMRKQPKERPAPENLMDH---------PFIVQY  259 (279)
T ss_pred             --CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC---------cccccc
Confidence              12234568999999999999999999999999         887643

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=2e-35  Score=314.15  Aligned_cols=246  Identities=25%  Similarity=0.346  Sum_probs=195.6

Q ss_pred             eeeeecceEEEEEEEc---CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCc
Q 047215          520 MIGVGGFGKVFKGEIE---DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANG  594 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~---~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~g  594 (851)
                      .||+|+||.||+|.++   ++..+++|++....  ....+++.+|+.++++++||||+++++++.. +..++||||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence            5899999999999753   46788999876542  3456789999999999999999999999864 5679999999999


Q ss_pred             chhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc-cc
Q 047215          595 TLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH-VS  673 (851)
Q Consensus       595 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~-~~  673 (851)
                      +|.+++...  ..+++..+.+++.|++.||.|||+   ++++||||||.|||++.++.+||+|||+++......... ..
T Consensus        81 ~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  155 (257)
T cd05116          81 PLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK  155 (257)
T ss_pred             cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeec
Confidence            999998543  368899999999999999999994   899999999999999999999999999987643322111 11


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY  752 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~  752 (851)
                      ....++..|+|||.+....++.++|||||||++|||++ |+.||......+      +.... ..+         .....
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~------~~~~i-~~~---------~~~~~  219 (257)
T cd05116         156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE------VTQMI-ESG---------ERMEC  219 (257)
T ss_pred             CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHH-HCC---------CCCCC
Confidence            22234578999999988889999999999999999998 888886543221      11111 111         11123


Q ss_pred             ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       753 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      +..++..+.+++.+||+.||.+||++.+|.+.|+.
T Consensus       220 ~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         220 PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            34566779999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1.9e-35  Score=316.47  Aligned_cols=256  Identities=25%  Similarity=0.426  Sum_probs=203.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC-c---ceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED-C---TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~-~---~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      ++|+..+.||+|+||.||+|+... +   ..+++|.+... .......|..|+.++++++||||+++++++..+...++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            356778899999999999998753 2   35899988764 455567899999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+++|+|.+++.... ..+++.+++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.....
T Consensus        84 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~  159 (269)
T cd05065          84 TEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD  159 (269)
T ss_pred             EecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence            99999999999986543 468999999999999999999995   89999999999999999999999999998754322


Q ss_pred             Cccccccc-c--ccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          668 EHTHVSTA-V--KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       668 ~~~~~~~~-~--~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      ........ .  ..+..|+|||++.+..++.++|||||||++||+++ |..|+......   ...++..    .      
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~i~----~------  226 (269)
T cd05065         160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINAIE----Q------  226 (269)
T ss_pred             ccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHHHH----c------
Confidence            11111111 1  12457999999999999999999999999999886 88887654321   1111111    0      


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                         ......+.+++..+.+++.+||+.+|.+||++++++..|+.+
T Consensus       227 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         227 ---DYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             ---CCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence               011122345567789999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=1.8e-35  Score=314.16  Aligned_cols=248  Identities=28%  Similarity=0.434  Sum_probs=200.5

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEE-ccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~-~~~~~~~lV~Ey~  591 (851)
                      ++|+..+.||+|+||.||++... +..+++|......  ..+.+.+|+.++++++|+|++++++++ ..++..++++||+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            46788899999999999999865 5667888876443  346789999999999999999999976 4556789999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++++|.+++.......+++..+++++.|++.||+|||+   .+++||||||+||++++++.+||+|||+++......   
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~---  156 (256)
T cd05082          83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---  156 (256)
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence            99999999976655568999999999999999999995   899999999999999999999999999987532211   


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                        ....++..|+|||++....++.++|||||||++|||++ |+.|+....      ..+.......          ....
T Consensus       157 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~------~~~~~~~~~~----------~~~~  218 (256)
T cd05082         157 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP------LKDVVPRVEK----------GYKM  218 (256)
T ss_pred             --CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHhc----------CCCC
Confidence              22345678999999998899999999999999999998 887775332      1111111110          1111


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      ..+..++..+.+++.+||+.+|++|||+.+++++|+.
T Consensus       219 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         219 DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence            2234556779999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.8e-36  Score=333.00  Aligned_cols=242  Identities=26%  Similarity=0.334  Sum_probs=195.7

Q ss_pred             eeeeeecceEEEEEEE----cCcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecC
Q 047215          519 LMIGVGGFGKVFKGEI----EDCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~----~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      +.||+|+||.||+++.    ..++.+|+|++....  ......+..|++++++++||||+++++++..++..++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            4699999999999874    356789999886532  2234567789999999999999999999999999999999999


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccc
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~  672 (851)
                      +|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++......  ..
T Consensus        82 ~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~~  154 (318)
T cd05582          82 GGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KK  154 (318)
T ss_pred             CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--Cc
Confidence            99999998543  468999999999999999999995   899999999999999999999999999987633221  12


Q ss_pred             ccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCC
Q 047215          673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY  752 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~  752 (851)
                      .....||+.|+|||.+.+..++.++|||||||++|||++|+.||......+.      ....         ....  ..+
T Consensus       155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~------~~~i---------~~~~--~~~  217 (318)
T cd05582         155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET------MTMI---------LKAK--LGM  217 (318)
T ss_pred             eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH------HHHH---------HcCC--CCC
Confidence            2345789999999999988999999999999999999999999875432111      1111         0001  123


Q ss_pred             ChhHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 047215          753 SPESLEKFGEIAEKCLDDEGKNRPT-----MGEVLWH  784 (851)
Q Consensus       753 ~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  784 (851)
                      +...+..+.+++.+||+.||++||+     +++++.|
T Consensus       218 p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~  254 (318)
T cd05582         218 PQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRH  254 (318)
T ss_pred             CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCC
Confidence            3445567899999999999999999     5667766

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.9e-35  Score=319.65  Aligned_cols=251  Identities=25%  Similarity=0.390  Sum_probs=201.7

Q ss_pred             CceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          515 FDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      |...++||+|+||+||+|... +++.+|+|.+....   ......+.+|++++++++|+||+++.+.+..++..++||||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            667789999999999999864 57789999876532   22334578899999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++.......+++..+..++.|++.||.|||+   .+|+||||||+||++++++.+||+|||++.......  
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~--  156 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE--  156 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC--
Confidence            999999998866555579999999999999999999995   899999999999999999999999999986533211  


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                       ......|+..|+|||++.+..++.++|+|||||++|||++|+.||.........  ..+...         +...  ..
T Consensus       157 -~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~--~~~~~~---------~~~~--~~  222 (285)
T cd05632         157 -SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKR--EEVDRR---------VLET--EE  222 (285)
T ss_pred             -cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHh---------hhcc--cc
Confidence             123456899999999999889999999999999999999999998754322111  111000         0000  01


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPT-----MGEVLWH  784 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  784 (851)
                      .++...+..+.+|+.+||+.||++||+     +.+++.|
T Consensus       223 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         223 VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence            123344566889999999999999999     7788888

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=1.4e-35  Score=320.76  Aligned_cols=257  Identities=27%  Similarity=0.446  Sum_probs=203.8

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCc
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE  583 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~  583 (851)
                      ..++|+..+.||+|+||.||++...      .+..+++|.+... ......++.+|+.++++++||||++++++|..+..
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~   82 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP   82 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence            3467888999999999999999864      3567899988754 34455779999999999999999999999999999


Q ss_pred             EEEEEEecCCcchhhhccCCC--------------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCC
Q 047215          584 MILVYEYMANGTLRSHLFGSD--------------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT  643 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~--------------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~  643 (851)
                      .++|+||+++|+|.+++....                    ...+++.+++.++.|++.||.|||+   .+++||||||+
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~  159 (288)
T cd05050          83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATR  159 (288)
T ss_pred             cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHh
Confidence            999999999999999985321                    2347888999999999999999995   89999999999


Q ss_pred             CeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCc
Q 047215          644 NILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPK  722 (851)
Q Consensus       644 NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~  722 (851)
                      ||+++.++.+||+|||+++................+..|+|||.+.+..++.++|||||||++|||++ |..|+......
T Consensus       160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~  239 (288)
T cd05050         160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE  239 (288)
T ss_pred             heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            99999999999999999875432221111222334678999999998999999999999999999998 77777543221


Q ss_pred             chhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          723 DQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       723 ~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                            ++..... .+.        .. ..+..++..+.+++.+||+.+|.+|||+.|+++.|+
T Consensus       240 ------~~~~~~~-~~~--------~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~  287 (288)
T cd05050         240 ------EVIYYVR-DGN--------VL-SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ  287 (288)
T ss_pred             ------HHHHHHh-cCC--------CC-CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence                  1111111 111        10 122345567999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.9e-35  Score=321.48  Aligned_cols=250  Identities=22%  Similarity=0.331  Sum_probs=204.7

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .+|+..+.||+|+||.||+|.. .++..+++|.+........+.+.+|+.++++++||||+++++.+..+...++||||+
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            5788889999999999999985 467789999887665555678899999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++++|.+++...   .+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++......  .
T Consensus       100 ~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~--~  171 (296)
T cd06654         100 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--S  171 (296)
T ss_pred             CCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhccccc--c
Confidence            999999998543   47899999999999999999995   899999999999999999999999999987533221  1


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      ......|++.|+|||.+.+..++.++|||||||++|||++|+.||....+...     +.. ...        .+.....
T Consensus       172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~-----~~~-~~~--------~~~~~~~  237 (296)
T cd06654         172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-----LYL-IAT--------NGTPELQ  237 (296)
T ss_pred             ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh-----HHH-Hhc--------CCCCCCC
Confidence            12234688999999999988899999999999999999999999865433211     110 000        0000111


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .+...+..+.+++.+||+.+|.+|||+.++++|
T Consensus       238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         238 NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             CccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence            223445678999999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-36  Score=296.68  Aligned_cols=263  Identities=23%  Similarity=0.331  Sum_probs=210.9

Q ss_pred             HhcCCceeeeeeeecceEEEEEE-EcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC-----CcE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ-----NEM  584 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~-~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~-----~~~  584 (851)
                      ..++|.+.+.||+|||+-||.++ ..++..+|+|++...+.++.+...+|++..++++||||+++++++..+     .+.
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~   98 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA   98 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence            34678889999999999999998 566788999999888878888999999999999999999999987433     458


Q ss_pred             EEEEEecCCcchhhhccCC--CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          585 ILVYEYMANGTLRSHLFGS--DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      ||+++|...|+|.+.+...  +...+++.++++|+.++++||++||+ ...++.||||||.|||+.+.+.++|.|||.+.
T Consensus        99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~-~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~  177 (302)
T KOG2345|consen   99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHE-KEPPYAHRDIKPANILLSDSGLPVLMDLGSAT  177 (302)
T ss_pred             EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhc-cCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence            9999999999999998643  23468999999999999999999996 33459999999999999999999999999987


Q ss_pred             cCCCCCccc-------cccccccCCcccCccccc---ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHH
Q 047215          663 TGPSMEHTH-------VSTAVKGSFGYLDPEYFW---RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM  732 (851)
Q Consensus       663 ~~~~~~~~~-------~~~~~~gt~~y~aPE~~~---~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~  732 (851)
                      ..+-.-...       .-.....|..|.|||.+.   +...++++|||||||+||+|+.|..||+......         
T Consensus       178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~G---------  248 (302)
T KOG2345|consen  178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQG---------  248 (302)
T ss_pred             ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcC---------
Confidence            643211111       112345788999999986   4568899999999999999999999997643321         


Q ss_pred             HHhhhcccc-cccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          733 KWQKQRSLK-SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       733 ~~~~~~~~~-~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                           +.+. .+..+.+.-.-....++.+.+++++||+.||.+||++.+++.+++.+
T Consensus       249 -----gSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  249 -----GSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             -----CeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence                 1111 12222332222233567799999999999999999999999998765

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=5.8e-36  Score=328.67  Aligned_cols=242  Identities=24%  Similarity=0.362  Sum_probs=193.5

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      ++||+|+||.||+|+.. .+..+|+|.+....   ......+..|..++..+ +||||+++++++..++..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            36999999999999875 56789999876531   23345667788888765 899999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |+|.+++...  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.....  ....
T Consensus        81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~  153 (316)
T cd05620          81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--DNRA  153 (316)
T ss_pred             CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccC--CCce
Confidence            9999988543  458899999999999999999995   89999999999999999999999999998742211  1123


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS  753 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  753 (851)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......   +   ..... .      ..+    .++
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~---~---~~~~~-~------~~~----~~~  216 (316)
T cd05620         154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE---L---FESIR-V------DTP----HYP  216 (316)
T ss_pred             eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---H---HHHHH-h------CCC----CCC
Confidence            45679999999999999999999999999999999999999997543211   1   11110 0      011    122


Q ss_pred             hhHHHHHHHHHHHhcccCCCCCCCH-HHHHHH
Q 047215          754 PESLEKFGEIAEKCLDDEGKNRPTM-GEVLWH  784 (851)
Q Consensus       754 ~~~~~~l~~l~~~Cl~~dP~~RPt~-~evl~~  784 (851)
                      ......+.+++.+||+.||++||++ +++++|
T Consensus       217 ~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h  248 (316)
T cd05620         217 RWITKESKDILEKLFERDPTRRLGVVGNIRGH  248 (316)
T ss_pred             CCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence            3345668999999999999999998 577777

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1.7e-35  Score=318.57  Aligned_cols=246  Identities=22%  Similarity=0.324  Sum_probs=193.3

Q ss_pred             eeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcch
Q 047215          521 IGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL  596 (851)
Q Consensus       521 LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL  596 (851)
                      ||+|+||.||+++.+ +++.+|+|.+....   ......+..|++++++++||||+++++++..+...++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            699999999999864 57889999876421   12234556799999999999999999999999999999999999999


Q ss_pred             hhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccccccc
Q 047215          597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV  676 (851)
Q Consensus       597 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~  676 (851)
                      .+++.......+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++.......   .....
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~~  154 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQR  154 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeecc
Confidence            998866555568999999999999999999995   899999999999999999999999999987543211   12335


Q ss_pred             ccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhH
Q 047215          677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPES  756 (851)
Q Consensus       677 ~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  756 (851)
                      .|+..|+|||++.+..++.++|||||||++|||++|+.||........  ..+....         ........ .....
T Consensus       155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~--~~~~~~~---------~~~~~~~~-~~~~~  222 (277)
T cd05607         155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA--KEELKRR---------TLEDEVKF-EHQNF  222 (277)
T ss_pred             CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh--HHHHHHH---------hhcccccc-ccccC
Confidence            689999999999988899999999999999999999999865432111  1111111         11111100 01234


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          757 LEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       757 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +..+.+++.+||+.||.+||+++|++++
T Consensus       223 ~~~~~~li~~~L~~~P~~R~~~~~~~~~  250 (277)
T cd05607         223 TEESKDICRLFLAKKPEDRLGSREKNDD  250 (277)
T ss_pred             CHHHHHHHHHHhccCHhhCCCCccchhh
Confidence            4568999999999999999999665433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=3e-35  Score=315.31  Aligned_cols=248  Identities=30%  Similarity=0.470  Sum_probs=195.7

Q ss_pred             eeeeecceEEEEEEEcCc-c--eeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEEecCCc
Q 047215          520 MIGVGGFGKVFKGEIEDC-T--LAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANG  594 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~~~-~--~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~Ey~~~g  594 (851)
                      +||+|+||.||+|+..+. .  .+++|..... .....+.+.+|++++.++ +||||++++++|...+..++||||+++|
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG   81 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence            589999999999987543 2  4678877643 345567889999999999 8999999999999999999999999999


Q ss_pred             chhhhccCCC--------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccc
Q 047215          595 TLRSHLFGSD--------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL  660 (851)
Q Consensus       595 sL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGl  660 (851)
                      +|.+++....              ...+++.++..++.|++.||+|||+   .+++||||||+|||+++++.+||+|||+
T Consensus        82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfgl  158 (270)
T cd05047          82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL  158 (270)
T ss_pred             cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCCC
Confidence            9999986432              2357899999999999999999995   8999999999999999999999999999


Q ss_pred             cccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcc
Q 047215          661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRS  739 (851)
Q Consensus       661 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~  739 (851)
                      ++....   .........+..|+|||++....++.++|||||||+++||++ |..||......      +......    
T Consensus       159 ~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~------~~~~~~~----  225 (270)
T cd05047         159 SRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------ELYEKLP----  225 (270)
T ss_pred             ccccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH------HHHHHHh----
Confidence            864211   111112234667999999988899999999999999999997 88887543211      1111110    


Q ss_pred             cccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          740 LKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       740 ~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                            .......+..++..+.+++.+||+.+|.+|||+.++++.|..++
T Consensus       226 ------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         226 ------QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             ------CCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence                  11111122344567899999999999999999999999988664

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=2.5e-35  Score=317.92  Aligned_cols=255  Identities=27%  Similarity=0.432  Sum_probs=204.4

Q ss_pred             CceeeeeeeecceEEEEEEEcC-cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          515 FDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      |+..+.||+|+||.||+|.... +..+++|.+........+.+.+|+++++.++||||+++++++..++..++|+||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            4556789999999999998764 567788888776666778899999999999999999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      ++|..++.... .++++..+..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++.....  ....
T Consensus        87 ~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~--~~~~  160 (282)
T cd06643          87 GAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT--IQRR  160 (282)
T ss_pred             CcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEcccccccccccc--cccc
Confidence            99988875432 468999999999999999999995   89999999999999999999999999998753221  1122


Q ss_pred             cccccCCcccCccccc-----ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          674 TAVKGSFGYLDPEYFW-----RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~-----~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                      ....++..|+|||++.     +..++.++|||||||++|||++|+.|+....+.+.      ........      .+.+
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~------~~~~~~~~------~~~~  228 (282)
T cd06643         161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV------LLKIAKSE------PPTL  228 (282)
T ss_pred             ccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH------HHHHhhcC------CCCC
Confidence            3456889999999984     45678899999999999999999998865432211      11110000      0111


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                        ..+...+..+.+++.+||+.+|.+||++.++++|         +|+..
T Consensus       229 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~---------~~~~~  267 (282)
T cd06643         229 --AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH---------PFVTV  267 (282)
T ss_pred             --CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC---------CCEec
Confidence              1122345678999999999999999999999999         88764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.1e-35  Score=333.90  Aligned_cols=262  Identities=23%  Similarity=0.265  Sum_probs=199.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC---cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED---CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~---~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ..+|.+.+.||+|+||.||++...+   +..+++|.+...     ..+.+|+++|++++||||+++++++......++||
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence            3579999999999999999997533   457888887643     23468999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      |++. ++|.+++.  ....+++.+++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus       166 e~~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~  239 (392)
T PHA03207        166 PKYK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP  239 (392)
T ss_pred             hhcC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence            9996 58888873  33568999999999999999999995   899999999999999999999999999987644322


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc-------
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK-------  741 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~-------  741 (851)
                      .........||+.|+|||++.+..++.++|||||||++|||++|+.||.............-...........       
T Consensus       240 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~  319 (392)
T PHA03207        240 DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGST  319 (392)
T ss_pred             ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccch
Confidence            2222334679999999999999999999999999999999999999987644322111111011100000000       


Q ss_pred             ------cccCccCCCCCC-------hhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          742 ------SIIDPHLKGNYS-------PESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       742 ------~i~d~~l~~~~~-------~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                            .......+..+.       ......+.+++.+||..||.+|||+.|++.|
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        320 NLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             hHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence                  000000000000       1223568899999999999999999999999

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=2.8e-35  Score=312.65  Aligned_cols=253  Identities=30%  Similarity=0.498  Sum_probs=201.2

Q ss_pred             CceeeeeeeecceEEEEEEEcC-cceeEEeecCCCChhhHH--HHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          515 FDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSEQGLA--EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~~~~~--~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      |+..+.||+|+||+||+++... ++.+|+|.+.........  ...+|+.++++++||||+++++++......++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            5677899999999999999765 457899998877544332  3456999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++++|.+++.  ....+++.++..++.|+++||.+||+   .+++|+||||+||+++.++.++|+|||.+....  ....
T Consensus        81 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~--~~~~  153 (260)
T PF00069_consen   81 PGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLS--ENNE  153 (260)
T ss_dssp             TTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEEST--STTS
T ss_pred             cccccccccc--cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc--cccc
Confidence            9999999996  33468999999999999999999996   899999999999999999999999999987431  1222


Q ss_pred             cccccccCCcccCccccc-ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          672 VSTAVKGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~-~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      ......++..|+|||++. +..++.++||||+|+++++|++|+.|+......+......   ......    .....   
T Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~---~~~~~~----~~~~~---  223 (260)
T PF00069_consen  154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIE---KILKRP----LPSSS---  223 (260)
T ss_dssp             EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHH---HHHHTH----HHHHT---
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhh---hccccc----ccccc---
Confidence            334566899999999998 8899999999999999999999999987652111111111   100000    00000   


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .........+.+++.+||+.||++||++.++++|
T Consensus       224 ~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~  257 (260)
T PF00069_consen  224 QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH  257 (260)
T ss_dssp             TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred             cccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            0011123679999999999999999999999999

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=2.9e-35  Score=312.33  Aligned_cols=249  Identities=30%  Similarity=0.476  Sum_probs=203.7

Q ss_pred             eeeeeecceEEEEEEEcC----cceeEEeecCCCChh-hHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIED----CTLAAIKRANPQSEQ-GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~----~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      ++||+|+||.||+|....    +..+++|.+...... ..+.+.+|++++++++|+||+++++++..+...++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            369999999999998754    677899988765433 367899999999999999999999999999999999999999


Q ss_pred             cchhhhccCCC-------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          594 GTLRSHLFGSD-------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       594 gsL~~~L~~~~-------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ++|.+++....       ...+++.++.+++.|++.||+|||+   .+++||||||+||++++++.+||+|||.++....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccccc
Confidence            99999996642       3578999999999999999999994   9999999999999999999999999999987554


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ...........++..|+|||.+....++.++||||||++++||++ |+.|+....+.+   +   ...... +       
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~---~~~~~~-~-------  223 (262)
T cd00192         158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE---V---LEYLRK-G-------  223 (262)
T ss_pred             ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH---H---HHHHHc-C-------
Confidence            332223344567889999999988899999999999999999999 577776542211   1   111111 0       


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                        .....+..++..+.+++.+||+.+|.+|||+.|++++|+
T Consensus       224 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         224 --YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             --CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence              111223445677999999999999999999999999863

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=1.4e-35  Score=343.02  Aligned_cols=272  Identities=19%  Similarity=0.319  Sum_probs=199.9

Q ss_pred             HHHHHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCC------cceeeEEEEEc
Q 047215          507 EIRVATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRH------RHLVSLIGFCD  579 (851)
Q Consensus       507 ~l~~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H------pnIv~l~g~~~  579 (851)
                      ++...+++|++.++||+|+||.||+|... .+..||||++.... ....++..|++++++++|      ++++++++++.
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~  201 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ  201 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence            34456789999999999999999999864 56789999986432 223456778888877755      45889999886


Q ss_pred             cC-CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC-------
Q 047215          580 EQ-NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF-------  651 (851)
Q Consensus       580 ~~-~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~-------  651 (851)
                      .+ ...++|||++ +++|.+++...  ..+++.++..|+.|++.||+|||+  +.+||||||||+|||++.++       
T Consensus       202 ~~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~--~~gIiHrDlKP~NILl~~~~~~~~~~~  276 (467)
T PTZ00284        202 NETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHT--ELHLMHTDLKPENILMETSDTVVDPVT  276 (467)
T ss_pred             cCCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh--cCCeecCCCCHHHEEEecCCccccccc
Confidence            54 5789999988 67888887543  468999999999999999999995  35999999999999998665       


Q ss_pred             ---------eEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCc
Q 047215          652 ---------VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPK  722 (851)
Q Consensus       652 ---------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~  722 (851)
                               .+||+|||++....     .......||+.|+|||++.+..++.++|||||||+||||++|+.||......
T Consensus       277 ~~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~  351 (467)
T PTZ00284        277 NRALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL  351 (467)
T ss_pred             ccccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence                     59999999876421     1233567999999999999999999999999999999999999999765443


Q ss_pred             chhcHHH---------HHHHH--------h-hhcccccccCccC----CC-C-C-ChhHHHHHHHHHHHhcccCCCCCCC
Q 047215          723 DQINLAD---------WAMKW--------Q-KQRSLKSIIDPHL----KG-N-Y-SPESLEKFGEIAEKCLDDEGKNRPT  777 (851)
Q Consensus       723 ~~~~l~~---------~~~~~--------~-~~~~~~~i~d~~l----~~-~-~-~~~~~~~l~~l~~~Cl~~dP~~RPt  777 (851)
                      +...+..         |...+        . ....+....++..    .. . . .......+.+|+.+||+.||++|||
T Consensus       352 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t  431 (467)
T PTZ00284        352 EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLN  431 (467)
T ss_pred             HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCC
Confidence            3222211         11000        0 0000000000000    00 0 0 0012356789999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhhccc
Q 047215          778 MGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       778 ~~evl~~L~~~~~~~~~w~~~  798 (851)
                      ++|+|+|         +|+..
T Consensus       432 a~e~L~H---------p~~~~  443 (467)
T PTZ00284        432 ARQMTTH---------PYVLK  443 (467)
T ss_pred             HHHHhcC---------ccccc
Confidence            9999999         77764

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=3.5e-35  Score=314.17  Aligned_cols=256  Identities=25%  Similarity=0.426  Sum_probs=203.9

Q ss_pred             cCCceeeeeeeecceEEEEEEEc----CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE----DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~----~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      .+|+..+.||+|+||.||+|+..    .+..+++|.+... .......+..|+.++++++||||+++++++..++..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            56788899999999999999863    2336889987654 234456899999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+++++|.+++.... ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++.....
T Consensus        84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~  159 (267)
T cd05066          84 TEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  159 (267)
T ss_pred             EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence            99999999999986543 458999999999999999999994   89999999999999999999999999999864332


Q ss_pred             Cccc-cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          668 EHTH-VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       668 ~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      .... ......++..|+|||++.+..++.++||||||++++|+++ |+.|+......+   ...+.   . ..       
T Consensus       160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~~~~~---~-~~-------  225 (267)
T cd05066         160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---VIKAI---E-EG-------  225 (267)
T ss_pred             cceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---HHHHH---h-CC-------
Confidence            1111 1112233568999999998899999999999999999886 988886543221   11111   0 00       


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                        .....+..++..+.+++.+|++.+|.+||++.++++.|..+
T Consensus       226 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         226 --YRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             --CcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence              01112234566789999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=5e-35  Score=318.00  Aligned_cols=263  Identities=22%  Similarity=0.373  Sum_probs=201.7

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC-----------------cceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceee
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED-----------------CTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVS  573 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~-----------------~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~  573 (851)
                      .++|+..+.||+|+||.||++...+                 ...+|+|+.... .......|.+|+.++++++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            3578889999999999999985432                 335789988754 3445578999999999999999999


Q ss_pred             EEEEEccCCcEEEEEEecCCcchhhhccCCCC---------CCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCC
Q 047215          574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDL---------PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTN  644 (851)
Q Consensus       574 l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~---------~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~N  644 (851)
                      +++++..++..++||||+++|+|.+++.....         ..+++.++..++.|++.||+|||+   .+++||||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~N  160 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhe
Confidence            99999999999999999999999999865321         246788999999999999999995   899999999999


Q ss_pred             eEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh--CCcCCCCCCCc
Q 047215          645 ILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC--ARAVINPTLPK  722 (851)
Q Consensus       645 ILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt--G~~p~~~~~~~  722 (851)
                      ||++.++.+||+|||+++...............++..|++||...+..++.++|||||||++|||++  |..|+......
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~  240 (296)
T cd05095         161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE  240 (296)
T ss_pred             EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence            9999999999999999875433222122222345678999999888899999999999999999998  55666543222


Q ss_pred             chhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          723 DQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       723 ~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      +.   ............ ....     ...+..++..+.+++.+||+.||.+||++.++++.|+
T Consensus       241 ~~---~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         241 QV---IENTGEFFRDQG-RQVY-----LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HH---HHHHHHHHhhcc-cccc-----CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            11   111111111110 0000     1112345578999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=7.4e-36  Score=328.89  Aligned_cols=242  Identities=26%  Similarity=0.362  Sum_probs=191.9

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHH-HHHhcCCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIE-MLSKLRHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~-~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      ++||+|+||+||+|+.. +++.+|+|++....   ......+..|.. +++.++||||+++++++..++..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            36999999999999874 67889999876431   222344555554 56789999999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |+|.+++...  ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....  .....
T Consensus        81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~--~~~~~  153 (323)
T cd05575          81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE--HSKTT  153 (323)
T ss_pred             CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCccccc--CCCcc
Confidence            9999988543  468889999999999999999995   8999999999999999999999999999875322  11223


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS  753 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  753 (851)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||......      +.....         .....  ..+
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~------~~~~~i---------~~~~~--~~~  216 (323)
T cd05575         154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA------EMYDNI---------LNKPL--RLK  216 (323)
T ss_pred             ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH------HHHHHH---------HcCCC--CCC
Confidence            4457999999999999999999999999999999999999998754221      111111         11110  122


Q ss_pred             hhHHHHHHHHHHHhcccCCCCCCCH----HHHHHH
Q 047215          754 PESLEKFGEIAEKCLDDEGKNRPTM----GEVLWH  784 (851)
Q Consensus       754 ~~~~~~l~~l~~~Cl~~dP~~RPt~----~evl~~  784 (851)
                      +..+..+.+++.+||+.||.+||++    .++++|
T Consensus       217 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~  251 (323)
T cd05575         217 PNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNH  251 (323)
T ss_pred             CCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcC
Confidence            3345678999999999999999987    577766

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=2.7e-35  Score=326.02  Aligned_cols=259  Identities=25%  Similarity=0.443  Sum_probs=204.5

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC--------cceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCC
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED--------CTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQN  582 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~--------~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~  582 (851)
                      .+|.+.+.||+|+||.||+++..+        ...+++|..... ......++.+|+++++++ +||||++++++|..++
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            467888999999999999997421        235789987653 344567899999999999 7999999999999999


Q ss_pred             cEEEEEEecCCcchhhhccCCC--------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc
Q 047215          583 EMILVYEYMANGTLRSHLFGSD--------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD  648 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld  648 (851)
                      ..++++||+++|+|.+++....              ...+++.+++.++.|++.||.|||+   .+++||||||+|||++
T Consensus        92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nill~  168 (334)
T cd05100          92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLVT  168 (334)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEc
Confidence            9999999999999999985421              2357889999999999999999994   8999999999999999


Q ss_pred             CCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcH
Q 047215          649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINL  727 (851)
Q Consensus       649 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l  727 (851)
                      .++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..|+.....      
T Consensus       169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------  242 (334)
T cd05100         169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV------  242 (334)
T ss_pred             CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH------
Confidence            999999999999876433222112222344568999999999999999999999999999998 7777654321      


Q ss_pred             HHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          728 ADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       728 ~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      .++......          ......+..++..+.+++.+||+.+|.+||++.|++++|+.+..
T Consensus       243 ~~~~~~~~~----------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         243 EELFKLLKE----------GHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             HHHHHHHHc----------CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence            111111111          01112233455679999999999999999999999999987764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.1e-36  Score=329.41  Aligned_cols=252  Identities=24%  Similarity=0.381  Sum_probs=211.9

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCc-EEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE-MILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~-~~lV~  588 (851)
                      ++|...+++|+|+||.++..+.+ +.+.+++|++...  +....+...+|+.++++++|||||.+.+.+..++. ++|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            46777889999999999988754 4567888876543  44445578899999999999999999999998888 99999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      +|++||+|.+.|...+...++++++.+++.|++.|+.|||   +..|+|||||+.||+++.+..+||+|||+|+......
T Consensus        84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~  160 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED  160 (426)
T ss_pred             eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence            9999999999998877778999999999999999999999   4899999999999999999999999999999865433


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                        .....+.||+.||.||.+.+.+|..|+|||||||++|||++-+++|.......   +   +...     ...+.    
T Consensus       161 --~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~---L---i~ki-----~~~~~----  223 (426)
T KOG0589|consen  161 --SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE---L---ILKI-----NRGLY----  223 (426)
T ss_pred             --hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH---H---HHHH-----hhccC----
Confidence              24566889999999999999999999999999999999999999887653221   1   1111     11111    


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                       ...+...+..++.++..||+.+|..||++.++|.+.
T Consensus       224 -~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P  259 (426)
T KOG0589|consen  224 -SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRP  259 (426)
T ss_pred             -CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhCh
Confidence             233455566799999999999999999999999883

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=9.3e-36  Score=334.17  Aligned_cols=261  Identities=22%  Similarity=0.264  Sum_probs=203.6

Q ss_pred             HHHHHHHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc
Q 047215          505 LAEIRVATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE  580 (851)
Q Consensus       505 ~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~  580 (851)
                      +.++....++|+..+.||+|+||.||+++.. .++.+|+|.+...   .......+.+|+.+++.++||||+++++++..
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~  114 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  114 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            4455666789999999999999999999875 4677899987542   22334567889999999999999999999999


Q ss_pred             CCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccc
Q 047215          581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL  660 (851)
Q Consensus       581 ~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGl  660 (851)
                      ++..++||||+++|+|.+++...   .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~DfG~  188 (371)
T cd05622         115 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGT  188 (371)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence            99999999999999999998543   47888889999999999999995   8999999999999999999999999999


Q ss_pred             cccCCCCCccccccccccCCcccCccccccc----CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh
Q 047215          661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ----QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK  736 (851)
Q Consensus       661 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~  736 (851)
                      ++...... ........||+.|+|||++...    .++.++|||||||+||||++|+.||.......      .......
T Consensus       189 a~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~  261 (371)
T cd05622         189 CMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------TYSKIMN  261 (371)
T ss_pred             eeEcCcCC-cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH------HHHHHHc
Confidence            97643221 1122356799999999999754    37899999999999999999999997543211      1111111


Q ss_pred             hcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCC--CCCHHHHHHHH
Q 047215          737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKN--RPTMGEVLWHL  785 (851)
Q Consensus       737 ~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~L  785 (851)
                      ...       .+........+..+++++.+||..++.+  ||+++++++|.
T Consensus       262 ~~~-------~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         262 HKN-------SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             CCC-------cccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence            100       0111112245567899999999854443  78999999994

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=3.4e-35  Score=311.45  Aligned_cols=250  Identities=26%  Similarity=0.393  Sum_probs=204.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      ++|+..++||+|+||.||+|...+ +..+++|.+.....  .+++.+|++++++++||||+++++++..+...++++||+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   80 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC   80 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence            678888899999999999999765 67889998865433  678999999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++++|.+++.... ..+++.++..++.|++.||.|||+   .+++||||+|+||+++.++.+||+|||++........  
T Consensus        81 ~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~--  154 (256)
T cd06612          81 GAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA--  154 (256)
T ss_pred             CCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCcc--
Confidence            9999999985433 468999999999999999999995   8999999999999999999999999999876433211  


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      ......++..|+|||++.+..++.++||||||+++|||++|+.|+....+.....      .      ......+.+  .
T Consensus       155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~------~------~~~~~~~~~--~  220 (256)
T cd06612         155 KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF------M------IPNKPPPTL--S  220 (256)
T ss_pred             ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh------h------hccCCCCCC--C
Confidence            2233457889999999999999999999999999999999999987543321100      0      000000111  1


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .+......+.+++.+||+.+|.+|||++|+++|
T Consensus       221 ~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~  253 (256)
T cd06612         221 DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH  253 (256)
T ss_pred             chhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence            223345678999999999999999999999998

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=3.5e-35  Score=311.93  Aligned_cols=249  Identities=24%  Similarity=0.370  Sum_probs=200.3

Q ss_pred             eeeeeecceEEEEEEEcC--c--ceeEEeecCCCCh-hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIED--C--TLAAIKRANPQSE-QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~--~--~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      ++||+|++|.||+|.+.+  +  ..+++|.+..... ...+.+.+|++++++++||||+++++++.. ...++|+||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            368999999999998643  2  3589999887655 667789999999999999999999999988 899999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc-cc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT-HV  672 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~-~~  672 (851)
                      |+|.+++.......+++..+..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+++........ ..
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  156 (257)
T cd05040          80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM  156 (257)
T ss_pred             CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence            999999866543568999999999999999999994   89999999999999999999999999999865332211 11


Q ss_pred             ccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      .....++..|+|||++....++.++|||||||++|||++ |+.|+......+      .........       .  ...
T Consensus       157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~------~~~~~~~~~-------~--~~~  221 (257)
T cd05040         157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ------ILKKIDKEG-------E--RLE  221 (257)
T ss_pred             ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHhcC-------C--cCC
Confidence            223457789999999999999999999999999999998 998876432211      111111100       0  011


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      .+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus       222 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         222 RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            22345567999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=4.8e-35  Score=348.39  Aligned_cols=268  Identities=22%  Similarity=0.301  Sum_probs=208.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..++||+|+||.||+|+.. .++.+|+|++...   .....+.|.+|++++++++||||+++++++..++..++||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            57889999999999999999865 4788999988653   2233567899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCC---------CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecc
Q 047215          589 EYMANGTLRSHLFGS---------DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG  659 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~---------~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFG  659 (851)
                      ||+++|+|.+++...         ....+++..+++++.|+++||+|||+   .+|+||||||+|||++.++.+||+|||
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecC
Confidence            999999999988531         12345677889999999999999995   899999999999999999999999999


Q ss_pred             ccccCCCCCc----------------cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcc
Q 047215          660 LSKTGPSMEH----------------THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD  723 (851)
Q Consensus       660 la~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~  723 (851)
                      +++.......                ........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus       159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k  238 (932)
T PRK13184        159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK  238 (932)
T ss_pred             cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence            9976411100                001123469999999999999999999999999999999999999986532211


Q ss_pred             hhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHHHHhhhhhcc
Q 047215          724 QINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRP-TMGEVLWHLEYVLQLHEAWMR  797 (851)
Q Consensus       724 ~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~evl~~L~~~~~~~~~w~~  797 (851)
                      ..          ..   ..+.++... ....+.+..+.+++.+||+.||++|| +++++++.|+..++....|..
T Consensus       239 i~----------~~---~~i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~~  299 (932)
T PRK13184        239 IS----------YR---DVILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWTV  299 (932)
T ss_pred             hh----------hh---hhccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCccccc
Confidence            10          00   011111100 00124456688999999999999996 577788888877766556643

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=2.5e-35  Score=321.22  Aligned_cols=267  Identities=22%  Similarity=0.392  Sum_probs=203.2

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++|...+.||+|+||.||+|+.. .+..+|+|.+.... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            56888899999999999999865 56788999876442 23345678899999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      ++ ++|.+++.... ..+++..+..++.|+++||.|||+   .+++||||||+|||++.++.+||+|||+++......  
T Consensus        86 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--  158 (301)
T cd07873          86 LD-KDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--  158 (301)
T ss_pred             cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC--
Confidence            97 58888875432 357889999999999999999995   899999999999999999999999999987532211  


Q ss_pred             ccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh---hccccccc--
Q 047215          671 HVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK---QRSLKSII--  744 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~---~~~~~~i~--  744 (851)
                      .......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||......+...   .......   ......+.  
T Consensus       159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  235 (301)
T cd07873         159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLH---FIFRILGTPTEETWPGILSN  235 (301)
T ss_pred             CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHcCCCChhhchhhhcc
Confidence            11223456889999999865 458899999999999999999999987654322211   1111000   00000000  


Q ss_pred             -------CccCCC----CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          745 -------DPHLKG----NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       745 -------d~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                             .+....    ...+..+..+++|+.+||+.||.+|||++|+++|         +|++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h---------~~f~~  291 (301)
T cd07873         236 EEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH---------PYFHC  291 (301)
T ss_pred             ccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC---------ccccc
Confidence                   011100    1112345678999999999999999999999999         88754

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4e-35  Score=327.53  Aligned_cols=260  Identities=22%  Similarity=0.249  Sum_probs=193.9

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ...+|...+.||+|+||.||+|+... +..+|+|.....      ....|+.++++++||||+++++++..+...++|+|
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  137 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP  137 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence            45689999999999999999998754 567888875432      23569999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      ++. ++|.+++... ...+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++....   
T Consensus       138 ~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~---  209 (357)
T PHA03209        138 HYS-SDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV---  209 (357)
T ss_pred             ccC-CcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCcccccccc---
Confidence            995 5888887543 3468999999999999999999995   8999999999999999999999999999875221   


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhc--------HHHHHHHHhhh-ccc
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN--------LADWAMKWQKQ-RSL  740 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~--------l~~~~~~~~~~-~~~  740 (851)
                      ........||..|+|||++.+..++.++|||||||++|||+++..++....+.....        +.......... ...
T Consensus       210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  289 (357)
T PHA03209        210 APAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEF  289 (357)
T ss_pred             CcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhc
Confidence            112234568999999999999999999999999999999999766554332222110        00000000000 000


Q ss_pred             c---------cccC--ccCCCCC-------ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 K---------SIID--PHLKGNY-------SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 ~---------~i~d--~~l~~~~-------~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .         ...+  ...+...       ....+..+.+++.+||+.||.+|||+.|+++|
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h  351 (357)
T PHA03209        290 PRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY  351 (357)
T ss_pred             CCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence            0         0000  0000000       01223456779999999999999999999999

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=3.6e-35  Score=313.64  Aligned_cols=258  Identities=23%  Similarity=0.346  Sum_probs=205.9

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+|+. .++..++||.+...   ......++.+|+.+++.++||||+++++++..++..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            3577778899999999999985 46788899976543   3344568899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          589 EYMANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       589 Ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||+++++|.+++..  .....+++.++.+++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence            99999999998853  223568899999999999999999994   8999999999999999999999999999875432


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      ..  .......|+..|+|||++.+..++.++||||||+++|||++|..|+......    ..++...      ......+
T Consensus       159 ~~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~------~~~~~~~  226 (267)
T cd08229         159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKK------IEQCDYP  226 (267)
T ss_pred             CC--cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch----HHHHhhh------hhcCCCC
Confidence            11  1123356889999999999889999999999999999999999998643221    1111111      1111111


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      .+   .....+..+.+++.+||+.+|.+||||.+|++.+..+
T Consensus       227 ~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         227 PL---PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             CC---CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            11   1223556799999999999999999999999987754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=7.5e-36  Score=333.90  Aligned_cols=253  Identities=21%  Similarity=0.344  Sum_probs=199.0

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+++.. .+..+|+|++...   .......+..|+.++.+++||||+++++.+..++..++||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            46888999999999999999875 5678999987643   2334567888999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~  155 (360)
T cd05627          81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH  155 (360)
T ss_pred             eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence            999999999998543  458899999999999999999995   999999999999999999999999999986432110


Q ss_pred             c---------------------------------cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcC
Q 047215          669 H---------------------------------THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV  715 (851)
Q Consensus       669 ~---------------------------------~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p  715 (851)
                      .                                 ........||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P  235 (360)
T cd05627         156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP  235 (360)
T ss_pred             ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence            0                                 0011235699999999999999999999999999999999999999


Q ss_pred             CCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCC---CHHHHHHH
Q 047215          716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRP---TMGEVLWH  784 (851)
Q Consensus       716 ~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---t~~evl~~  784 (851)
                      |....+...      .......  ...+..+   .  ....+..+++++.+|+. +|.+|+   +++|+++|
T Consensus       236 f~~~~~~~~------~~~i~~~--~~~~~~p---~--~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h  293 (360)
T cd05627         236 FCSETPQET------YRKVMNW--KETLVFP---P--EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH  293 (360)
T ss_pred             CCCCCHHHH------HHHHHcC--CCceecC---C--CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence            976543221      1111100  0001001   0  11234567888888764 999998   48999999

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=6.1e-35  Score=326.47  Aligned_cols=262  Identities=22%  Similarity=0.288  Sum_probs=196.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC------
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN------  582 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~------  582 (851)
                      .++|+..+.||+|+||.||++... .+..+|+|++...  .......+.+|+.++++++||||+++++++...+      
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            478999999999999999999864 5788999988643  3344567889999999999999999999985443      


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      ..++||||+++ +|.+.+.    ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       100 ~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~  171 (359)
T cd07876         100 DVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  171 (359)
T ss_pred             eeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence            57999999976 5555553    237788899999999999999995   899999999999999999999999999987


Q ss_pred             cCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhc------------HH--
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN------------LA--  728 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~------------l~--  728 (851)
                      ....   ........||+.|+|||++.+..++.++|||||||++|||++|+.||......+...            ..  
T Consensus       172 ~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (359)
T cd07876         172 TACT---NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNR  248 (359)
T ss_pred             cccc---CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHH
Confidence            5322   112234568999999999999999999999999999999999999997653221100            00  


Q ss_pred             --HHHHHHhhhc-cc-----ccccCccCC---CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          729 --DWAMKWQKQR-SL-----KSIIDPHLK---GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       729 --~~~~~~~~~~-~~-----~~i~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                        .....+.... ..     .+.......   ..........+++|+.+||+.||++|||+.|+++|
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  315 (359)
T cd07876         249 LQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH  315 (359)
T ss_pred             HHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence              0000000000 00     000000000   00111234568999999999999999999999999

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=6.3e-35  Score=317.53  Aligned_cols=255  Identities=22%  Similarity=0.340  Sum_probs=208.7

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .+|...+.||+|+||.||+|.. .++..+++|.+........+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            6788899999999999999985 567889999887665555677899999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++++|.+++..   ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||++........  
T Consensus        99 ~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~--  170 (297)
T cd06656          99 AGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--  170 (297)
T ss_pred             CCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc--
Confidence            99999999854   347889999999999999999995   8999999999999999999999999999875332211  


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      ......+++.|+|||.+.+..++.++|||||||++|+|++|+.||....+......            .  .........
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~------------~--~~~~~~~~~  236 (297)
T cd06656         171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------------I--ATNGTPELQ  236 (297)
T ss_pred             CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee------------e--ccCCCCCCC
Confidence            12334688899999999999999999999999999999999999865433221100            0  000000111


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      .+...+..+.+++.+||+.+|.+||+++++++|         +|++.
T Consensus       237 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~---------~~~~~  274 (297)
T cd06656         237 NPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH---------PFLKL  274 (297)
T ss_pred             CccccCHHHHHHHHHHccCChhhCcCHHHHhcC---------chhcc
Confidence            223445668899999999999999999999999         88764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=4.7e-35  Score=315.89  Aligned_cols=262  Identities=22%  Similarity=0.284  Sum_probs=198.4

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +|+..+.||+|++|.||+|+.. ++..+++|++...  .......+.+|+.++++++||||+++++++..++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            4777889999999999999875 5788999987643  223346788999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCC-CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          591 MANGTLRSHLFGSD-LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       591 ~~~gsL~~~L~~~~-~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      ++ ++|.+++.... ...+++.++..++.|+++||.|||+   .+++||||||+||+++.++.+||+|||++....... 
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-  155 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV-  155 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence            97 68888775432 3568999999999999999999995   899999999999999999999999999987533211 


Q ss_pred             cccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHh-----------hh
Q 047215          670 THVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ-----------KQ  737 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~-----------~~  737 (851)
                       .......+++.|+|||++.+ ..++.++|||||||+++||+||+.|+.........  ......+.           ..
T Consensus       156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  232 (285)
T cd07861         156 -RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQL--FRIFRILGTPTEDVWPGVTSL  232 (285)
T ss_pred             -ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH--HHHHHHhCCCChhhhhcchhh
Confidence             11223456889999998865 45799999999999999999999988754322111  00000000           00


Q ss_pred             cccc----cccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          738 RSLK----SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       738 ~~~~----~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ....    ......+ .......+..+.+++.+||+.||.+|||+.+++.|
T Consensus       233 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         233 PDYKNTFPKWKKGSL-RSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             HHHHhhccccCcchh-HHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence            0000    0000000 00112345668899999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=2.1e-35  Score=325.30  Aligned_cols=247  Identities=23%  Similarity=0.333  Sum_probs=197.6

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      +|+..+.||+|+||.||+++.. ++..+|+|++...   .....+.+..|+.+++.+. |++|+++.+++...+..++||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            4777889999999999999864 5778999987643   2334456788999998885 578888999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~  155 (323)
T cd05615          81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG  155 (323)
T ss_pred             cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence            999999999998543  458999999999999999999995   899999999999999999999999999987532211


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                        .......||+.|+|||++.+..++.++|||||||++|||++|+.||....+..   +.   ...         .... 
T Consensus       156 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~---~~i---------~~~~-  217 (323)
T cd05615         156 --VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE---LF---QSI---------MEHN-  217 (323)
T ss_pred             --ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH---HH---HHH---------HhCC-
Confidence              12234568999999999999999999999999999999999999987543211   11   111         1111 


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTM-----GEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~evl~~  784 (851)
                       ..++...+..+.+++.+||+.+|.+|++.     +++++|
T Consensus       218 -~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05615         218 -VSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH  257 (323)
T ss_pred             -CCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence             12233445678999999999999999974     667666

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=1e-34  Score=310.73  Aligned_cols=251  Identities=23%  Similarity=0.317  Sum_probs=189.1

Q ss_pred             eeeeecceEEEEEEEcCc---ceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcc
Q 047215          520 MIGVGGFGKVFKGEIEDC---TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT  595 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~~~---~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gs  595 (851)
                      .||+|+||.||+|...++   ..+++|.+... .......|.+|+..++.++||||+++++.|......++||||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            589999999999975433   46788876544 33445678899999999999999999999999999999999999999


Q ss_pred             hhhhccCCC---CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccc
Q 047215          596 LRSHLFGSD---LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       596 L~~~L~~~~---~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~  672 (851)
                      |.+++....   .....+.....++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++..........
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~  158 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT  158 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence            999986543   2334677889999999999999995   8999999999999999999999999999875332221111


Q ss_pred             ccccccCCcccCcccccc-------cCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          673 STAVKGSFGYLDPEYFWR-------QQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~-------~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      .....++..|+|||++..       ..++.++|||||||++|||++ |..|+....+.+.  +    .... ......+.
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~--~----~~~~-~~~~~~~~  231 (269)
T cd05042         159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV--L----KQVV-REQDIKLP  231 (269)
T ss_pred             cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH--H----HHHh-hccCccCC
Confidence            223345678999998753       457889999999999999999 6666654322110  0    0000 11111222


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                      ++.    .+...+..+.+++..|+ .||++|||+++|++.|
T Consensus       232 ~~~----~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l  267 (269)
T cd05042         232 KPQ----LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL  267 (269)
T ss_pred             CCc----ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence            222    23345566788999998 5999999999998875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=6.7e-35  Score=311.37  Aligned_cols=238  Identities=21%  Similarity=0.364  Sum_probs=187.8

Q ss_pred             eeeeecceEEEEEEEcC-------------cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          520 MIGVGGFGKVFKGEIED-------------CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~~-------------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .||+|+||.||+|+...             ...+++|.+..........|.+|+.++++++||||+++++++..+...++
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l   81 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM   81 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence            58999999999997532             12478888776655556688999999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe-------EEEeecc
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV-------AKMSDFG  659 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~-------~kl~DFG  659 (851)
                      ||||+++|+|..++.... ..+++.++.+++.|+++||+|||+   ++|+||||||+|||++.++.       +|++|||
T Consensus        82 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g  157 (262)
T cd05077          82 VEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG  157 (262)
T ss_pred             EEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence            999999999988875433 458999999999999999999995   89999999999999986654       8999999


Q ss_pred             ccccCCCCCccccccccccCCcccCccccc-ccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhh
Q 047215          660 LSKTGPSMEHTHVSTAVKGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQ  737 (851)
Q Consensus       660 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~  737 (851)
                      ++......      ....++..|+|||++. +..++.++|||||||++|||++ |+.|+......+.       ..... 
T Consensus       158 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-------~~~~~-  223 (262)
T cd05077         158 IPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-------ERFYE-  223 (262)
T ss_pred             CCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-------HHHHh-
Confidence            98653221      2235788899999987 5678999999999999999984 6666654321111       00000 


Q ss_pred             cccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          738 RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       738 ~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                      .        ..  .........+.+|+.+||+.||.+||++.+++++|
T Consensus       224 ~--------~~--~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         224 G--------QC--MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             c--------Cc--cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            0        00  01122345689999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=7e-35  Score=308.45  Aligned_cols=248  Identities=27%  Similarity=0.422  Sum_probs=198.7

Q ss_pred             eeeeeecceEEEEEEEcCcceeEEeecCCCCh-hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcchh
Q 047215          519 LMIGVGGFGKVFKGEIEDCTLAAIKRANPQSE-QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR  597 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~  597 (851)
                      ++||+|+||.||++...+++.+++|....... .....+.+|++++++++||||+++++++......++||||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            36999999999999987788999998776533 35678999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccc
Q 047215          598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK  677 (851)
Q Consensus       598 ~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~  677 (851)
                      +++.... ..+++..++.++.+++.+|+|||+   .+++||||||+|||++.++.+||+|||+++...............
T Consensus        81 ~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  156 (251)
T cd05041          81 TFLRKKK-NRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ  156 (251)
T ss_pred             HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence            9986543 357899999999999999999994   899999999999999999999999999987543211111111223


Q ss_pred             cCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhH
Q 047215          678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPES  756 (851)
Q Consensus       678 gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  756 (851)
                      ++..|+|||.+.+..++.++|||||||+++||++ |..|+....+..   ...   ..          ........+...
T Consensus       157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~---~~~---~~----------~~~~~~~~~~~~  220 (251)
T cd05041         157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ---TRE---RI----------ESGYRMPAPQLC  220 (251)
T ss_pred             ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH---HHH---HH----------hcCCCCCCCccC
Confidence            4567999999998899999999999999999999 677765443211   111   10          001111223345


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          757 LEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       757 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      +..+.+++.+||+.+|.+|||+.|+++.|.
T Consensus       221 ~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         221 PEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            667999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.4e-35  Score=313.70  Aligned_cols=258  Identities=22%  Similarity=0.347  Sum_probs=204.7

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC-c----ceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED-C----TLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~-~----~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .+|+..+.||+|+||.||+|...+ +    ..+++|...... ......+.+|+.++++++||||++++++|.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            567778899999999999998643 2    257888876553 3455788999999999999999999999987 78999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      |+||+++|+|.+++.... ..+++..++.++.|++.||+|||+   .+++||||||+|||++.++.+||+|||+++....
T Consensus        86 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~  161 (279)
T cd05057          86 ITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV  161 (279)
T ss_pred             EEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence            999999999999986543 358999999999999999999995   9999999999999999999999999999986543


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ...........++..|+|||.+....++.++|+||||+++|||++ |+.|+......+      +..... .+       
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~------~~~~~~-~~-------  227 (279)
T cd05057         162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE------IPDLLE-KG-------  227 (279)
T ss_pred             cccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH------HHHHHh-CC-------
Confidence            222111122234568999999988899999999999999999998 998886543221      111111 10       


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                        .....+..+...+.+++.+||..+|.+||++.++++.|..+.+.
T Consensus       228 --~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05057         228 --ERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD  271 (279)
T ss_pred             --CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence              01112233456789999999999999999999999998877553

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.7e-35  Score=309.99  Aligned_cols=248  Identities=25%  Similarity=0.354  Sum_probs=196.3

Q ss_pred             eeeeeecceEEEEEEEcCc----ceeEEeecCCCCh-hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIEDC----TLAAIKRANPQSE-QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~~----~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      ++||+|+||.||+|.....    ..+++|....... ...+.+.+|++++++++||||+++++++. .+..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            3699999999999975322    5789998876543 34567899999999999999999999886 4568999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc-c
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH-V  672 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~-~  672 (851)
                      |+|.+++....  .+++..+..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++......... .
T Consensus        80 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~  154 (257)
T cd05060          80 GPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRA  154 (257)
T ss_pred             CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCccccc
Confidence            99999996543  68999999999999999999995   899999999999999999999999999987643222111 1


Q ss_pred             ccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      .....++..|+|||.+.+..++.++||||||+++|||++ |+.||....+.   .+..+..    ..  .       ...
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~---~~~~~~~----~~--~-------~~~  218 (257)
T cd05060         155 TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA---EVIAMLE----SG--E-------RLP  218 (257)
T ss_pred             ccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHHH----cC--C-------cCC
Confidence            122234568999999998999999999999999999998 88888654321   1111111    11  0       112


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      .+..++..+.+++.+||+.+|++||++.++++.|+.+
T Consensus       219 ~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         219 RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            2334556789999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=1.3e-34  Score=309.13  Aligned_cols=257  Identities=23%  Similarity=0.349  Sum_probs=207.2

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+|... +++.+++|.+...   .......+.+|++++++++|+|++++++++..++..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            57888999999999999999876 7788999977532   3344678999999999999999999999999999999999


Q ss_pred             EecCCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          589 EYMANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       589 Ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||+++|+|.+++..  .....+++.++..++.+++.||.|||+   .+++||||||+||+++.++.++|+|||+++....
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~  158 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence            99999999998853  223558899999999999999999994   8999999999999999999999999999875332


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      ..  .......++..|+|||.+.+..++.++|||||||++|||++|+.|+.....    +..+....... +        
T Consensus       159 ~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~-~--------  223 (267)
T cd08224         159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKIEK-C--------  223 (267)
T ss_pred             CC--cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc----cHHHHHhhhhc-C--------
Confidence            11  112334588899999999988999999999999999999999998854321    12111111110 0        


Q ss_pred             cCCCCCCh-hHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          747 HLKGNYSP-ESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       747 ~l~~~~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                       .....+. ..+..+.+++.+||+.+|.+|||+.++++.|..+
T Consensus       224 -~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         224 -DYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             -CCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence             0111122 4456789999999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=6e-35  Score=317.55  Aligned_cols=250  Identities=24%  Similarity=0.370  Sum_probs=205.5

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .+|+..+.||.|++|.||+|.. .+++.+++|.+........+.+.+|+.+++.++||||+++++++..++..++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            4688899999999999999985 567889999887665555678899999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++++|.+++...   .+++.++..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||++........  
T Consensus        99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~--  170 (296)
T cd06655          99 AGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS--  170 (296)
T ss_pred             CCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhcccccc--
Confidence            999999988543   48899999999999999999995   8999999999999999999999999999875432211  


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      ......++..|+|||.+.+..++.++|||||||++|+|++|+.||....+....      ..... ..     .+.+  .
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~------~~~~~-~~-----~~~~--~  236 (296)
T cd06655         171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YLIAT-NG-----TPEL--Q  236 (296)
T ss_pred             cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH------HHHHh-cC-----Cccc--C
Confidence            123346888999999999889999999999999999999999998665432211      00000 00     0011  1


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .+...+..+.+++.+||+.||.+|||+.+++.|
T Consensus       237 ~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~  269 (296)
T cd06655         237 NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH  269 (296)
T ss_pred             CcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence            223455678999999999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-36  Score=329.77  Aligned_cols=252  Identities=27%  Similarity=0.418  Sum_probs=205.7

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCc-ceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDC-TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~-~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      +.|+++..||-|+||.||||..++. ...|.|.+...+....++|.-||++|..++||+||+|++.+..++.++|+.|||
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC  111 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC  111 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence            3456677899999999999987654 456788888888888999999999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      .||-+...+..-. ..|++.++.-+|.|++.||.|||+   ++|||||||+.|||+.-+|.++|+|||.+....  ....
T Consensus       112 ~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~--~t~q  185 (1187)
T KOG0579|consen  112 GGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK--STRQ  185 (1187)
T ss_pred             CCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccch--hHHh
Confidence            9999988764433 468999999999999999999996   899999999999999999999999999975421  1222


Q ss_pred             cccccccCCcccCccccc-----ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          672 VSTAVKGSFGYLDPEYFW-----RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~-----~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      ....+.||+.|||||+..     ..+|+.++||||||+.|.||..+.+|-....+...      .....      .--.|
T Consensus       186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRV------llKia------KSePP  253 (1187)
T KOG0579|consen  186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV------LLKIA------KSEPP  253 (1187)
T ss_pred             hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHH------HHHHh------hcCCC
Confidence            345678999999999875     46899999999999999999999887665433211      11110      00112


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .|.  .|......+.+++.+||.+||..||++.++++|
T Consensus       254 TLl--qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H  289 (1187)
T KOG0579|consen  254 TLL--QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH  289 (1187)
T ss_pred             ccc--CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence            221  133455679999999999999999999999999

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=5e-35  Score=316.13  Aligned_cols=252  Identities=25%  Similarity=0.361  Sum_probs=201.9

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      +|+..+.||+|+||.||++... .+..+++|.+... .......+.+|+.++++++||||+++++.+..++..++||||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            5677889999999999999875 6788899987654 3444578899999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCC-CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          592 ANGTLRSHLFGSD-LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       592 ~~gsL~~~L~~~~-~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      ++++|..++.... ...+++..+..++.+++.||.|||+  +.+++||||||+||+++.++.+||+|||++......   
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---  156 (286)
T cd06622          82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS---  156 (286)
T ss_pred             CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC---
Confidence            9999998885532 3468999999999999999999995  468999999999999999999999999998753221   


Q ss_pred             ccccccccCCcccCccccccc------CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQ------QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~------~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                       ......++..|+|||.+.+.      .++.++|||||||++|||++|+.||........      ....      ..+.
T Consensus       157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~------~~~~------~~~~  223 (286)
T cd06622         157 -LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI------FAQL------SAIV  223 (286)
T ss_pred             -ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH------HHHH------HHHh
Confidence             12334578899999998544      358899999999999999999999865422111      0000      1111


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +.. ....+...+..+.+++.+||+.+|.+||++++++.|
T Consensus       224 ~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         224 DGD-PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             hcC-CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence            111 112334466778999999999999999999999999

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=3.5e-35  Score=316.69  Aligned_cols=262  Identities=27%  Similarity=0.394  Sum_probs=207.4

Q ss_pred             ccCHHHHHHHhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEc
Q 047215          502 RFTLAEIRVATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCD  579 (851)
Q Consensus       502 ~~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~  579 (851)
                      ..++.++..+.+.|+..+.||+|+||.||+|.. ..++.+++|...... ....++..|+.+++++ +||||+++++++.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~   83 (282)
T cd06636           5 DIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFI   83 (282)
T ss_pred             hhhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehh
Confidence            346667777888999999999999999999987 456788999876543 3346788999999999 7999999999984


Q ss_pred             ------cCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeE
Q 047215          580 ------EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA  653 (851)
Q Consensus       580 ------~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~  653 (851)
                            .....+++|||+++|+|.+++.......+++..+..++.|+++||.|||+   .+++||||||+||++++++.+
T Consensus        84 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~~  160 (282)
T cd06636          84 KKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEV  160 (282)
T ss_pred             cccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCE
Confidence                  34678999999999999999876555568888899999999999999995   899999999999999999999


Q ss_pred             EEeeccccccCCCCCccccccccccCCcccCccccc-----ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHH
Q 047215          654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW-----RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLA  728 (851)
Q Consensus       654 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~  728 (851)
                      +|+|||++.......  .......|+..|+|||.+.     ...++.++|||||||++|||++|+.||....+...... 
T Consensus       161 ~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~-  237 (282)
T cd06636         161 KLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL-  237 (282)
T ss_pred             EEeeCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh-
Confidence            999999987532211  1123356889999999986     34688899999999999999999999875433221100 


Q ss_pred             HHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          729 DWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       729 ~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                                 ......+..   .....+..+.+++.+||+.||.+||++.|+++|
T Consensus       238 -----------~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~  279 (282)
T cd06636         238 -----------IPRNPPPKL---KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH  279 (282)
T ss_pred             -----------HhhCCCCCC---cccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence                       000001111   112345679999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.2e-35  Score=313.92  Aligned_cols=256  Identities=27%  Similarity=0.397  Sum_probs=207.4

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++|+..+.||.|++|.||+|... ++..+++|...... ......+.+|++++++++||||+++++++..+...++|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            35777788999999999999865 57789999876543 44556789999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++...   ++++.++..++.|++.||.|||+   .+++||||+|+||++++++.++|+|||+++......  
T Consensus        81 ~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--  152 (274)
T cd06609          81 CGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--  152 (274)
T ss_pred             eCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecccc--
Confidence            9999999998643   68999999999999999999994   899999999999999999999999999987644321  


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      .......++..|+|||++.+..++.++||||||+++|||++|+.|+....+...      .... ...     ..+.+..
T Consensus       153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~------~~~~-~~~-----~~~~~~~  220 (274)
T cd06609         153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV------LFLI-PKN-----NPPSLEG  220 (274)
T ss_pred             cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH------HHHh-hhc-----CCCCCcc
Confidence            122344678899999999988899999999999999999999999865432111      1100 000     1111111


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCC
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDD  800 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~  800 (851)
                      .   ..+..+.+++.+||..+|++|||++++++|         +|+....
T Consensus       221 ~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~---------~~~~~~~  258 (274)
T cd06609         221 N---KFSKPFKDFVSLCLNKDPKERPSAKELLKH---------KFIKKAK  258 (274)
T ss_pred             c---ccCHHHHHHHHHHhhCChhhCcCHHHHhhC---------hhhcCCC
Confidence            1   145568999999999999999999999999         8876533

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=5.3e-35  Score=314.31  Aligned_cols=238  Identities=23%  Similarity=0.365  Sum_probs=187.4

Q ss_pred             eeeeecceEEEEEEEcC-------------------------cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeE
Q 047215          520 MIGVGGFGKVFKGEIED-------------------------CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSL  574 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l  574 (851)
                      +||+|+||.||+|.+..                         ...+++|.+..........|.+|+.++++++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            59999999999997521                         13478888876555555678899999999999999999


Q ss_pred             EEEEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC---
Q 047215          575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF---  651 (851)
Q Consensus       575 ~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~---  651 (851)
                      +++|..+...++||||+++|+|..++... ...+++..+.+++.|+++||+|||+   ++|+||||||+|||++..+   
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~~~~~  157 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARLGLAE  157 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEeccCccc
Confidence            99999999999999999999999888543 3468899999999999999999994   8999999999999997543   


Q ss_pred             ----eEEEeeccccccCCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHH-hCCcCCCCCCCcchh
Q 047215          652 ----VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVV-CARAVINPTLPKDQI  725 (851)
Q Consensus       652 ----~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLl-tG~~p~~~~~~~~~~  725 (851)
                          .+|++|||++......      ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.|+....+.+. 
T Consensus       158 ~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-  230 (274)
T cd05076         158 GTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK-  230 (274)
T ss_pred             CccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH-
Confidence                4899999997643221      12346788999998875 56899999999999999995 68888765433221 


Q ss_pred             cHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          726 NLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       726 ~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                        ..+    ....       .    ..+......+.+++.+||+.+|++|||+.+++++|
T Consensus       231 --~~~----~~~~-------~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         231 --ERF----YEKK-------H----RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             --HHH----HHhc-------c----CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence              110    0000       0    11122234689999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=7.8e-35  Score=315.77  Aligned_cols=252  Identities=27%  Similarity=0.401  Sum_probs=203.3

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      +.|++.++||+|+||.||+|+... +..+++|..........+.+.+|+.++++++||||+++++.+..++..++||||+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            567788899999999999998754 6788999988777777788999999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++++|..++.... ..+++.++..++.|++.+|.|||   +.+++||||||+||+++.++.+||+|||++......  ..
T Consensus        92 ~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--~~  165 (292)
T cd06644          92 PGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT--LQ  165 (292)
T ss_pred             CCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceecccc--cc
Confidence            9999988775433 45899999999999999999999   489999999999999999999999999998653221  11


Q ss_pred             cccccccCCcccCccccc-----ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          672 VSTAVKGSFGYLDPEYFW-----RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~-----~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      ......++..|+|||++.     ...++.++|||||||++|||++|+.|+....+..      ........      ..+
T Consensus       166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~------~~~  233 (292)
T cd06644         166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR------VLLKIAKS------EPP  233 (292)
T ss_pred             ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH------HHHHHhcC------CCc
Confidence            123455788999999984     3457889999999999999999999886543211      11111100      011


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..  ..+...+..+.+++.+||+.+|++||+++++++|
T Consensus       234 ~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         234 TL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             cC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            11  1123445568999999999999999999999999

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=7.1e-35  Score=311.14  Aligned_cols=252  Identities=22%  Similarity=0.414  Sum_probs=201.5

Q ss_pred             CCceeeeeeeecceEEEEEEEcCcceeEEeecCCCC------hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQS------EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~------~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      +|...+.||+|+||.||+|...++..+|+|.+....      ......+.+|++++++++|+||++++++|...+..+++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            356678899999999999998888889999876432      22345688999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      +||+++++|.+++...  .++++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++.....
T Consensus        81 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  155 (265)
T cd06631          81 MEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV  155 (265)
T ss_pred             EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence            9999999999998543  357899999999999999999995   88999999999999999999999999998753211


Q ss_pred             ----CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          668 ----EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       668 ----~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                          ..........|+..|+|||++.+..++.++|||||||+++||++|+.||.........      ...   .... .
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~------~~~---~~~~-~  225 (265)
T cd06631         156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM------FYI---GAHR-G  225 (265)
T ss_pred             cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH------HHh---hhcc-C
Confidence                1111223456889999999999989999999999999999999999998643221110      000   0000 0


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..+    ..+...+..+.+++.+||+.+|.+||++.|++.|
T Consensus       226 ~~~----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  262 (265)
T cd06631         226 LMP----RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH  262 (265)
T ss_pred             CCC----CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            111    1233455668999999999999999999999998

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.8e-36  Score=327.63  Aligned_cols=246  Identities=25%  Similarity=0.375  Sum_probs=207.1

Q ss_pred             eeeeeecceEEEEEEEcCc-ceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcchh
Q 047215          519 LMIGVGGFGKVFKGEIEDC-TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR  597 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~~-~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~  597 (851)
                      -+||+|.||+||-|+..+. ..+|||.+........+-+..||.+.++|+|.|||+++|.|.+++.+-|.||-+|||+|.
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            3799999999999996554 457999988877777788999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCCCC--chhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc-CCCeEEEeeccccccCCCCCcccccc
Q 047215          598 SHLFGSDLPPL--TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSMEHTHVST  674 (851)
Q Consensus       598 ~~L~~~~~~~l--~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld-~~~~~kl~DFGla~~~~~~~~~~~~~  674 (851)
                      ++|+.+- +++  .+..+-...+||++||.|||   +..|||||||-.|||++ -.|.+||+|||-++....  .+....
T Consensus       661 sLLrskW-GPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg--inP~TE  734 (1226)
T KOG4279|consen  661 SLLRSKW-GPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG--INPCTE  734 (1226)
T ss_pred             HHHHhcc-CCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhcc--CCcccc
Confidence            9997654 345  67788889999999999999   59999999999999996 789999999999887543  333456


Q ss_pred             ccccCCcccCccccccc--CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCC
Q 047215          675 AVKGSFGYLDPEYFWRQ--QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY  752 (851)
Q Consensus       675 ~~~gt~~y~aPE~~~~~--~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~  752 (851)
                      +..||+.|||||++..+  .|..++|||||||.+.||.||++||........      ++        .++---+..+++
T Consensus       735 TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA------AM--------FkVGmyKvHP~i  800 (1226)
T KOG4279|consen  735 TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA------AM--------FKVGMYKVHPPI  800 (1226)
T ss_pred             ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH------hh--------hhhcceecCCCC
Confidence            78899999999999754  699999999999999999999999976433211      11        111111234567


Q ss_pred             ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       753 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      |.+.....+.++.+|+.+||.+||++.++|+.
T Consensus       801 Peelsaeak~FilrcFepd~~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  801 PEELSAEAKNFILRCFEPDPCDRPSAKDLLQD  832 (1226)
T ss_pred             cHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence            88889999999999999999999999999887

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=8.2e-35  Score=310.00  Aligned_cols=254  Identities=24%  Similarity=0.395  Sum_probs=204.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .++|+..++||+|+||.||++...++..+++|..... ......+.+|++++++++|+||+++.+++.. ...+++|||+
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~   82 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM   82 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence            4678889999999999999999877788899987654 3345678999999999999999999999887 7889999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++|+|.+++.......+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++........ .
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~  158 (260)
T cd05073          83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-T  158 (260)
T ss_pred             CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCCc-c
Confidence            99999999976555678899999999999999999994   8999999999999999999999999999875432111 1


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      ......++..|+|||++....++.++|+|||||+++|+++ |+.|+.......   +..+.    ..+         ...
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~~~----~~~---------~~~  222 (260)
T cd05073         159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE---VIRAL----ERG---------YRM  222 (260)
T ss_pred             cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH---HHHHH----hCC---------CCC
Confidence            1122345678999999998899999999999999999999 887876432211   11111    010         011


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      ..+...+..+.+++.+||+.+|++||++.++++.|+.
T Consensus       223 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         223 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            1223445678999999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=4.3e-35  Score=316.50  Aligned_cols=262  Identities=25%  Similarity=0.430  Sum_probs=202.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-----CcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccC--CcE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-----DCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ--NEM  584 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-----~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--~~~  584 (851)
                      ..|+..+.||+|+||.||+++++     .+..+++|.+.... ......+.+|+.++++++||||+++.+++...  ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            34677889999999999999753     46778999987553 44456799999999999999999999998765  568


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ++||||+++++|.+++.... ..+++.++..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+++..
T Consensus        84 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAI  159 (284)
T ss_pred             EEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCcccccc
Confidence            99999999999999985432 358999999999999999999994   89999999999999999999999999998864


Q ss_pred             CCCCc-cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCc---------chhcHHHHHHHH
Q 047215          665 PSMEH-THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPK---------DQINLADWAMKW  734 (851)
Q Consensus       665 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~---------~~~~l~~~~~~~  734 (851)
                      ..... ........++..|+|||++.+..++.++|||||||++|||++++.|.......         .+.....+....
T Consensus       160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd05079         160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVL  239 (284)
T ss_pred             ccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHH
Confidence            32211 11223345677899999998889999999999999999999987654321110         001111111110


Q ss_pred             hhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          735 QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       735 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                       ..         ......+..++..+.+|+.+||+.+|.+|||+.++++.|+.+
T Consensus       240 -~~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         240 -EE---------GKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             -Hc---------CccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence             00         011112334567799999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=1.1e-34  Score=308.97  Aligned_cols=252  Identities=27%  Similarity=0.448  Sum_probs=193.2

Q ss_pred             eeeeeecceEEEEEEEcC----cceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEc-cCCcEEEEEEecC
Q 047215          519 LMIGVGGFGKVFKGEIED----CTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCD-EQNEMILVYEYMA  592 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~----~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~-~~~~~~lV~Ey~~  592 (851)
                      +.||+|+||.||+|...+    ...+|+|+.... .......+.+|+.+++.++||||++++++|. .++..++|+||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            368999999999998632    356899987543 3445678899999999999999999999875 4566899999999


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc--
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT--  670 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~--  670 (851)
                      +|+|.+++.... ..+++..++.++.|++.||+|||+   .+++||||||+|||+++++.+||+|||+++........  
T Consensus        81 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~  156 (262)
T cd05058          81 HGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV  156 (262)
T ss_pred             CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence            999999986543 346778889999999999999994   89999999999999999999999999998753321111  


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      .......++..|+|||.+....++.++|||||||++|||++|+.|+.....  ...+...   ... +         ...
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--~~~~~~~---~~~-~---------~~~  221 (262)
T cd05058         157 HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD--SFDITVY---LLQ-G---------RRL  221 (262)
T ss_pred             cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHH---Hhc-C---------CCC
Confidence            111234467789999999888999999999999999999996554332211  1111111   110 0         001


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                      ..+...+..+.+++.+||+.+|++||++.++++.|+.+.
T Consensus       222 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         222 LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence            112234567899999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=7.3e-35  Score=311.48  Aligned_cols=251  Identities=24%  Similarity=0.367  Sum_probs=197.5

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-----ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc--CCcE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-----SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEM  584 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~--~~~~  584 (851)
                      .+|+..++||+|+||.||+|... .+..+++|++...     .......+.+|+.++++++||||+++++++..  +...
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            47888899999999999999864 5778899977533     22345678899999999999999999998864  4678


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ++++||+++++|.+++...  ..+++.....++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++..
T Consensus        82 ~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~  156 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRL  156 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence            9999999999999998543  358899999999999999999994   89999999999999999999999999998754


Q ss_pred             CCCC-ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          665 PSME-HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       665 ~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      .... .........++..|+|||++.+..++.++|||||||++|||++|+.||........      ....         
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~------~~~~---------  221 (266)
T cd06651         157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA------IFKI---------  221 (266)
T ss_pred             ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH------HHHH---------
Confidence            3211 11112234588999999999998999999999999999999999999875422111      1110         


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ........++....+.+.+++ +||..+|++||+++|+++|
T Consensus       222 ~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h  261 (266)
T cd06651         222 ATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH  261 (266)
T ss_pred             hcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence            000011223344455677777 6888899999999999999

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=7.3e-35  Score=309.30  Aligned_cols=250  Identities=23%  Similarity=0.364  Sum_probs=202.3

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc-CCcEEEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE-QNEMILVYE  589 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~-~~~~~lV~E  589 (851)
                      +|+..+.||+|++|.||++... +++.+++|++...  .....+.+.+|++++++++|||++++++.+.. +...+++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            4778899999999999999865 4577899987643  33445678999999999999999999998764 446799999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++++|.+++.......+++.++..++.+++.||+|||+   .+++||||||+||+++.++.++|+|||++....... 
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~-  156 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC-  156 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence            9999999999976555668999999999999999999994   899999999999999999999999999987643221 


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                       .......+++.|+|||.+.+..++.++||||||++++||++|+.|+......      ....... .+..         
T Consensus       157 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~------~~~~~~~-~~~~---------  219 (257)
T cd08223         157 -DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN------SLVYRII-EGKL---------  219 (257)
T ss_pred             -CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHH-hcCC---------
Confidence             1233456889999999999999999999999999999999999887643211      1111111 1110         


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ...+...+..+.+++.+|++.+|.+|||+.++++|
T Consensus       220 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         220 PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            11233455679999999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=4.5e-35  Score=313.25  Aligned_cols=248  Identities=27%  Similarity=0.436  Sum_probs=196.3

Q ss_pred             eeeeecceEEEEEEEcC-------cceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          520 MIGVGGFGKVFKGEIED-------CTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~~-------~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .||+|+||.||+|+..+       +..+++|.+.... ......+.+|+.++++++||||++++++|......++||||+
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM   81 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence            58999999999998643       2467888776543 344668899999999999999999999999999999999999


Q ss_pred             CCcchhhhccCC-----CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC-----eEEEeecccc
Q 047215          592 ANGTLRSHLFGS-----DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF-----VAKMSDFGLS  661 (851)
Q Consensus       592 ~~gsL~~~L~~~-----~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~-----~~kl~DFGla  661 (851)
                      ++++|.+++...     ....+++.+++.++.|++.||.|||+   .+++|+||||+||+++.+.     .+||+|||++
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~  158 (269)
T cd05044          82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA  158 (269)
T ss_pred             CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence            999999998643     22347899999999999999999994   8899999999999998877     8999999998


Q ss_pred             ccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhccc
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSL  740 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~  740 (851)
                      +...............++..|+|||++.+..++.++|||||||++|||++ |+.|+......   ....   .. ..   
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~---~~~~---~~-~~---  228 (269)
T cd05044         159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ---EVLQ---HV-TA---  228 (269)
T ss_pred             cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH---HHHH---HH-hc---
Confidence            76433222222223345778999999999999999999999999999998 88887543221   1111   10 00   


Q ss_pred             ccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       741 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                            ......+...+..+.+++.+||+.+|.+||++.++++.|+
T Consensus       229 ------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         229 ------GGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             ------CCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence                  0111223345677899999999999999999999998875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=7.5e-35  Score=309.13  Aligned_cols=250  Identities=20%  Similarity=0.321  Sum_probs=203.1

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      +|+..++||+|+||.||++... ++..+++|.+... .....+.+.+|+.++++++||||+++++.+..++..+++|||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            4778899999999999999864 5678899987543 3445677889999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++|+|.+++.......+++..+..++.|++.||.|||+   .+++|+||||+||++++++.++|+|||+++......  .
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~--~  155 (255)
T cd08219          81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG--A  155 (255)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeecccc--c
Confidence            99999998865555568899999999999999999994   899999999999999999999999999987543221  1


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      ......|++.|+|||++.+..++.++|+||||+++|+|++|+.||.......      ...... .+..         ..
T Consensus       156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~------~~~~~~-~~~~---------~~  219 (255)
T cd08219         156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN------LILKVC-QGSY---------KP  219 (255)
T ss_pred             ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH------HHHHHh-cCCC---------CC
Confidence            2234568899999999998899999999999999999999999987542211      111110 1110         11


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .+...+..+.+++.+||+.||.+|||+.+++..
T Consensus       220 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         220 LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            223345668999999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.7e-35  Score=316.99  Aligned_cols=256  Identities=23%  Similarity=0.332  Sum_probs=204.3

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++|+..+.||+|+||+||++... +++.+++|..... .....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            56777789999999999999865 5778888876654 234457889999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++...  +++++..+..++.+++.+|.|||+  ..+++||||||+||++++++.++|+|||++......   
T Consensus        85 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~---  157 (284)
T cd06620          85 MDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS---  157 (284)
T ss_pred             CCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh---
Confidence            9999999988543  468999999999999999999995  468999999999999999999999999998653221   


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcch-----hcHHHHHHHHhhhcccccccC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ-----INLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~-----~~l~~~~~~~~~~~~~~~i~d  745 (851)
                       ......|+..|+|||++.+..++.++|||||||++|||++|+.||....+.+.     ....++........      .
T Consensus       158 -~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  230 (284)
T cd06620         158 -IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP------P  230 (284)
T ss_pred             -ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc------C
Confidence             11235689999999999888999999999999999999999999876443211     11112211111100      1


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                      +.+.   ....+..+.+++.+||+.||.+|||+.|+++|+
T Consensus       231 ~~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         231 PRLP---SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             CCCC---chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence            1111   122556789999999999999999999999993

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=2.3e-35  Score=325.30  Aligned_cols=242  Identities=25%  Similarity=0.330  Sum_probs=191.3

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHH-HHHhcCCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIE-MLSKLRHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~-~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      ++||+|+||+||+|+.. +++.+|+|++...   .......+..|.. +++.++||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            36999999999999864 6788999987643   2233345556655 46778999999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |+|..++...  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.....  ....
T Consensus        81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--~~~~  153 (325)
T cd05604          81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--SDTT  153 (325)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC--CCCc
Confidence            9999888543  468899999999999999999995   89999999999999999999999999998753221  1123


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS  753 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  753 (851)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+      .......         ..+  ...
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~------~~~~~~~---------~~~--~~~  216 (325)
T cd05604         154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE------MYDNILH---------KPL--VLR  216 (325)
T ss_pred             ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH------HHHHHHc---------CCc--cCC
Confidence            44579999999999999999999999999999999999999987543211      1111110         000  112


Q ss_pred             hhHHHHHHHHHHHhcccCCCCCCCHH----HHHHH
Q 047215          754 PESLEKFGEIAEKCLDDEGKNRPTMG----EVLWH  784 (851)
Q Consensus       754 ~~~~~~l~~l~~~Cl~~dP~~RPt~~----evl~~  784 (851)
                      +..+..+.+++.+||+.+|.+||++.    ++++|
T Consensus       217 ~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h  251 (325)
T cd05604         217 PGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEH  251 (325)
T ss_pred             CCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcC
Confidence            23455688999999999999999874    66666

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.6e-35  Score=308.69  Aligned_cols=254  Identities=27%  Similarity=0.342  Sum_probs=212.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCc-ceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDC-TLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~-~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|.-|+||++++.+. ...|+|++.+..   .+.....+.|-++|+.++||-++.|++.++.++..|+||
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            4566677899999999999998764 788999988753   344566788999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC--
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS--  666 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~--  666 (851)
                      |||+||+|..+++.+....+++..+...+..++-||+|||   -.|||.|||||+||||-++|.+.|+||.|+..+..  
T Consensus       157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~P  233 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP  233 (459)
T ss_pred             ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence            9999999999999988889999999999999999999999   59999999999999999999999999998753210  


Q ss_pred             -------------------------------CCc---------------------cccccccccCCcccCcccccccCCC
Q 047215          667 -------------------------------MEH---------------------THVSTAVKGSFGYLDPEYFWRQQLT  694 (851)
Q Consensus       667 -------------------------------~~~---------------------~~~~~~~~gt~~y~aPE~~~~~~~t  694 (851)
                                                     ...                     ...+....||-.|+|||++++..-+
T Consensus       234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg  313 (459)
T KOG0610|consen  234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG  313 (459)
T ss_pred             eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence                                           000                     0112235699999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCC
Q 047215          695 EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKN  774 (851)
Q Consensus       695 ~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~  774 (851)
                      .++|+|+|||+||||+.|..||.+....+               .+..|+-..+.-...+..+..+++||++.|.+||.+
T Consensus       314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~---------------Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~k  378 (459)
T KOG0610|consen  314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKE---------------TLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSK  378 (459)
T ss_pred             chhhHHHHHHHHHHHHhCCCCcCCCCchh---------------hHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhh
Confidence            99999999999999999999998765432               223344333332233467788999999999999999


Q ss_pred             CCC----HHHHHHH
Q 047215          775 RPT----MGEVLWH  784 (851)
Q Consensus       775 RPt----~~evl~~  784 (851)
                      |..    +.||-+|
T Consensus       379 Rlg~~rGA~eIK~H  392 (459)
T KOG0610|consen  379 RLGSKRGAAEIKRH  392 (459)
T ss_pred             hhccccchHHhhcC
Confidence            998    8999888

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=8.2e-35  Score=321.13  Aligned_cols=257  Identities=19%  Similarity=0.281  Sum_probs=195.3

Q ss_pred             eeeeeee--cceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecC
Q 047215          518 SLMIGVG--GFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       518 ~~~LG~G--~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      .++||+|  +|++||+++. .++..+|+|++...  .......+.+|+.+++.++||||++++++|..++..++||||++
T Consensus         3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~   82 (327)
T cd08227           3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA   82 (327)
T ss_pred             hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence            4579999  7899999986 46788999998754  23344567889999999999999999999999999999999999


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc---
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH---  669 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~---  669 (851)
                      +|+|.+++.......+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.++++||+..........   
T Consensus        83 ~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (327)
T cd08227          83 YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR  159 (327)
T ss_pred             CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence            9999999865544568999999999999999999995   8999999999999999999999999986543211110   


Q ss_pred             --cccccccccCCcccCcccccc--cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccccc-
Q 047215          670 --THVSTAVKGSFGYLDPEYFWR--QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII-  744 (851)
Q Consensus       670 --~~~~~~~~gt~~y~aPE~~~~--~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~-  744 (851)
                        ........++..|+|||++.+  ..++.++|||||||++|||++|+.||........  .....     .+...... 
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~-----~~~~~~~~~  232 (327)
T cd08227         160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKL-----NGTVPCLLD  232 (327)
T ss_pred             ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH--HHHHh-----cCCcccccc
Confidence              001122346778999999975  4689999999999999999999999864322110  00000     00000000 


Q ss_pred             ------------------Cc-----------------cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          745 ------------------DP-----------------HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       745 ------------------d~-----------------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                                        +.                 .............+.+++.+||+.||++|||++|+++|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~  307 (327)
T cd08227         233 TTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  307 (327)
T ss_pred             ccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence                              00                 00001122345678999999999999999999999999

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=1.2e-34  Score=316.31  Aligned_cols=258  Identities=24%  Similarity=0.389  Sum_probs=200.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-Ccc----eeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCT----LAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~----~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      ++|+..+.||+|+||.||+|... ++.    .+++|...... .....++.+|+.++++++||||++++|+|... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            56777889999999999999863 333    46888776543 33345788999999999999999999999764 4679


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ++||+++|+|.+++.... ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++....
T Consensus        86 v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~  161 (303)
T cd05110          86 VTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG  161 (303)
T ss_pred             eehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccccccC
Confidence            999999999999986542 357899999999999999999995   8999999999999999999999999999986433


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ...........++..|+|||++.+..++.++|||||||++|||++ |+.|+......   ...++.    ..+       
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~---~~~~~~----~~~-------  227 (303)
T cd05110         162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR---EIPDLL----EKG-------  227 (303)
T ss_pred             cccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH----HCC-------
Confidence            222111223345778999999999999999999999999999997 88887543211   111111    111       


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                        .....++.++..+.+++.+||..+|++||+++++++.|..+...
T Consensus       228 --~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         228 --ERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD  271 (303)
T ss_pred             --CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence              00111233456789999999999999999999999998876443

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=1.2e-34  Score=310.35  Aligned_cols=256  Identities=24%  Similarity=0.360  Sum_probs=203.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCc----ceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDC----TLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~----~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      ++|...++||+|+||.||+|...+.    ..+++|...... ....+.+.+|+.++++++||||+++++++.. ...++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv   84 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV   84 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence            5677888999999999999986432    467888877654 4556789999999999999999999999875 567899


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+++|+|.+++.... ..+++.++..++.+++.||.|||+   .+++||||||+|||++.++.+||+|||+++.....
T Consensus        85 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  160 (270)
T cd05056          85 MELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE  160 (270)
T ss_pred             EEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence            99999999999986533 358999999999999999999995   89999999999999999999999999998764332


Q ss_pred             CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      .. .......++..|+|||.+....++.++||||||++++||++ |+.||......+   ...   .... +  .     
T Consensus       161 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~---~~~---~~~~-~--~-----  225 (270)
T cd05056         161 SY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND---VIG---RIEN-G--E-----  225 (270)
T ss_pred             cc-eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH---HHH---HHHc-C--C-----
Confidence            11 11122334568999999988899999999999999999986 998886543221   111   1110 0  0     


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                        ....+..++..+.+++.+|+..+|.+|||+.++++.|+.+..
T Consensus       226 --~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         226 --RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ  267 (270)
T ss_pred             --cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence              011234556779999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=3.9e-35  Score=327.48  Aligned_cols=262  Identities=22%  Similarity=0.287  Sum_probs=197.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC------C
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ------N  582 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~------~  582 (851)
                      .++|+..+.||+|+||.||++... .+..+|+|++...  .......+.+|+.+++.++||||+++++++...      .
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   95 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ   95 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence            468999999999999999999854 5678899988754  334456788999999999999999999988543      3


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      ..++||||+++ +|.+.+..    .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus        96 ~~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Dfg~~~  167 (355)
T cd07874          96 DVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  167 (355)
T ss_pred             eeEEEhhhhcc-cHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeCcccc
Confidence            57999999976 56665532    47888999999999999999994   899999999999999999999999999997


Q ss_pred             cCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHH---------HH---
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLA---------DW---  730 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~---------~~---  730 (851)
                      ....   ........||..|+|||++.+..++.++|||||||++|||++|+.||......+.....         ++   
T Consensus       168 ~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (355)
T cd07874         168 TAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK  244 (355)
T ss_pred             cCCC---ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            6322   11223456899999999999999999999999999999999999998754322111000         00   


Q ss_pred             ----HHHHhhh-cccccccCccC--------CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          731 ----AMKWQKQ-RSLKSIIDPHL--------KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       731 ----~~~~~~~-~~~~~i~d~~l--------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                          ...+... .....+..+..        ...........+++++.+||+.||++|||+.|+++|
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             hcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence                0000000 00000000000        001112234678999999999999999999999999

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=1.3e-34  Score=307.24  Aligned_cols=251  Identities=28%  Similarity=0.454  Sum_probs=200.9

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecC
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      .+|+..+.||+|+||.||+|...++..+++|.+..... ....|.+|++++++++|||++++++++......++||||++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            46777889999999999999887777889998765432 34578999999999999999999999999999999999999


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccc
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~  672 (851)
                      +++|.+++.... ..+++..+..++.+++.+|+|||+   .+++||||||+||+++.++.+||+|||+++....... ..
T Consensus        83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~~  157 (256)
T cd05112          83 HGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY-TS  157 (256)
T ss_pred             CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCcc-cc
Confidence            999999986543 357899999999999999999995   8999999999999999999999999999875432211 11


Q ss_pred             ccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      .....++.+|+|||.+.+..++.++||||||+++|||++ |+.|+......      +........   .....+     
T Consensus       158 ~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~------~~~~~~~~~---~~~~~~-----  223 (256)
T cd05112         158 STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS------EVVETINAG---FRLYKP-----  223 (256)
T ss_pred             cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH------HHHHHHhCC---CCCCCC-----
Confidence            122335678999999998899999999999999999998 88887643221      111111100   011111     


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                        ...+..+.+|+.+||+.+|++|||+.+++++|
T Consensus       224 --~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         224 --RLASQSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             --CCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence              12346789999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.2e-35  Score=315.72  Aligned_cols=253  Identities=28%  Similarity=0.414  Sum_probs=205.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      .++|++.+.||.|+||.||+|... ++..+++|..........+.|.+|++++++++||||+++++++..+...++||||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            456888889999999999999875 5788999998877767778899999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++.... ..+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++.......  
T Consensus        84 ~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--  157 (280)
T cd06611          84 CDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL--  157 (280)
T ss_pred             cCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhcccc--
Confidence            99999999885533 468999999999999999999995   899999999999999999999999999986533211  


Q ss_pred             ccccccccCCcccCccccc-----ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          671 HVSTAVKGSFGYLDPEYFW-----RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      .......++..|++||.+.     ...++.++||||||+++|||++|+.|+.......      ....... .     ..
T Consensus       158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~-~-----~~  225 (280)
T cd06611         158 QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR------VLLKILK-S-----EP  225 (280)
T ss_pred             cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH------HHHHHhc-C-----CC
Confidence            1223456889999999975     3457889999999999999999999986543221      1111110 0     00


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +.+  ..+...+..+.+++.+||+.+|.+||+++++++|
T Consensus       226 ~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         226 PTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             CCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            111  1123345678999999999999999999999999

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.9e-35  Score=321.40  Aligned_cols=255  Identities=21%  Similarity=0.254  Sum_probs=197.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+++.. +++.+|+|.+...   .....+.+.+|+.++..++||||+++++++..++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            46888999999999999999865 5788999987642   2234456889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++... ...+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||++.......
T Consensus        81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  156 (331)
T cd05597          81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG  156 (331)
T ss_pred             ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence            999999999998543 2458889999999999999999995   899999999999999999999999999986533211


Q ss_pred             ccccccccccCCcccCcccccc-----cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWR-----QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                       ........||+.|+|||++..     ..++.++|||||||++|||++|+.||......      +............. 
T Consensus       157 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~------~~~~~i~~~~~~~~-  228 (331)
T cd05597         157 -TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV------ETYGKIMNHKEHFQ-  228 (331)
T ss_pred             -CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH------HHHHHHHcCCCccc-
Confidence             111223468999999999863     45788999999999999999999998654221      11111111110000 


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCC--CCCCHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGK--NRPTMGEVLWH  784 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~--~RPt~~evl~~  784 (851)
                          +. ......+..+++++.+||..++.  .||+++++++|
T Consensus       229 ----~~-~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         229 ----FP-PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             ----CC-CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence                10 11123456688889887765443  48899999999

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=2.4e-35  Score=328.32  Aligned_cols=261  Identities=23%  Similarity=0.293  Sum_probs=207.0

Q ss_pred             CCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcC-C-----cceeeEEEEEccCCcEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-H-----RHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H-----pnIv~l~g~~~~~~~~~l  586 (851)
                      +|++.+.||+|+||.|-|+.. +.++.||||++++...- ..+-..|+.+|..|+ |     -|+|++++++...+++||
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f-~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF-LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHH-HHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            788999999999999999975 45789999999876443 345578999999997 4     399999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC--CCeEEEeeccccccC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE--NFVAKMSDFGLSKTG  664 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~--~~~~kl~DFGla~~~  664 (851)
                      |+|.+.. +|.++|+.+....++...+..|+.||+.||.+||   +.+|||+||||+||||.+  ...+||+|||.++..
T Consensus       266 VfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~  341 (586)
T KOG0667|consen  266 VFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE  341 (586)
T ss_pred             eehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence            9999865 9999999888888999999999999999999999   599999999999999953  347999999999873


Q ss_pred             CCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh--------
Q 047215          665 PSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK--------  736 (851)
Q Consensus       665 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~--------  736 (851)
                      ...    .. ...-+..|.|||++.+.+|+.+.||||||||+.||++|.+.|.+..+.++...+.-+.....        
T Consensus       342 ~q~----vy-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~  416 (586)
T KOG0667|consen  342 SQR----VY-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAK  416 (586)
T ss_pred             CCc----ce-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence            321    12 34567789999999999999999999999999999999888888777776543322211100        


Q ss_pred             -------h-ccc------ccc----------------cCc-cCC-------CCCChhHHHHHHHHHHHhcccCCCCCCCH
Q 047215          737 -------Q-RSL------KSI----------------IDP-HLK-------GNYSPESLEKFGEIAEKCLDDEGKNRPTM  778 (851)
Q Consensus       737 -------~-~~~------~~i----------------~d~-~l~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~  778 (851)
                             . ...      ...                .+. ...       ..........+.+++++||+.||.+|+|.
T Consensus       417 ~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp  496 (586)
T KOG0667|consen  417 KAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITP  496 (586)
T ss_pred             ccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCH
Confidence                   0 000      000                000 000       00111334678999999999999999999


Q ss_pred             HHHHHH
Q 047215          779 GEVLWH  784 (851)
Q Consensus       779 ~evl~~  784 (851)
                      .|+|+|
T Consensus       497 ~qal~H  502 (586)
T KOG0667|consen  497 AQALNH  502 (586)
T ss_pred             HHHhcC
Confidence            999999

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=9.8e-35  Score=318.87  Aligned_cols=260  Identities=20%  Similarity=0.289  Sum_probs=186.0

Q ss_pred             eeeeeecceEEEEEEEc---CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEc--cCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIE---DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD--EQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~---~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~--~~~~~~lV~Ey~~~  593 (851)
                      ++||+|+||.||+|+..   .+..+|+|.+.....  ...+.+|++++++++||||+++++++.  .+...+++|||+.+
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH   84 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence            47999999999999864   346789998765422  245678999999999999999999884  35568999999865


Q ss_pred             cchhhhccCC-------CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE----cCCCeEEEeeccccc
Q 047215          594 GTLRSHLFGS-------DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL----DENFVAKMSDFGLSK  662 (851)
Q Consensus       594 gsL~~~L~~~-------~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl----d~~~~~kl~DFGla~  662 (851)
                       +|.+++...       ....+++..+..++.|++.||.|||+   .+|+||||||+|||+    +.++.+||+|||+++
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07868          85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence             777766321       12358889999999999999999995   899999999999999    466789999999997


Q ss_pred             cCCCCCc-cccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchh------cHHHHHHH-
Q 047215          663 TGPSMEH-THVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI------NLADWAMK-  733 (851)
Q Consensus       663 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~------~l~~~~~~-  733 (851)
                      ....... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........      ...+.... 
T Consensus       161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~  240 (317)
T cd07868         161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV  240 (317)
T ss_pred             ccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHh
Confidence            6432211 112234568999999999876 46899999999999999999999998653321110      00000000 


Q ss_pred             --------Hhhhcccc---ccc---Cc------cCC---CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          734 --------WQKQRSLK---SII---DP------HLK---GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       734 --------~~~~~~~~---~i~---d~------~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                              +.......   ...   ..      .+.   ..........+.+++.+||+.||.+|||++|+++|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h  314 (317)
T cd07868         241 MGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD  314 (317)
T ss_pred             cCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence                    00000000   000   00      000   00001122457899999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=2e-35  Score=325.18  Aligned_cols=242  Identities=24%  Similarity=0.311  Sum_probs=190.6

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHH-HHHhcCCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIE-MLSKLRHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~-~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      ++||+|+||.||+|+.. ++..+|+|++....   ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36999999999999874 56789999876432   222344555554 67889999999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |+|..++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....  ....
T Consensus        81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~~  153 (321)
T cd05603          81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--EETT  153 (321)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC--CCcc
Confidence            9999888543  457888899999999999999995   89999999999999999999999999998753221  1123


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS  753 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  753 (851)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||......      ......         ....  ...+
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i---------~~~~--~~~~  216 (321)
T cd05603         154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS------QMYDNI---------LHKP--LQLP  216 (321)
T ss_pred             ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH------HHHHHH---------hcCC--CCCC
Confidence            3457899999999999999999999999999999999999998754211      111111         1111  1223


Q ss_pred             hhHHHHHHHHHHHhcccCCCCCCCH----HHHHHH
Q 047215          754 PESLEKFGEIAEKCLDDEGKNRPTM----GEVLWH  784 (851)
Q Consensus       754 ~~~~~~l~~l~~~Cl~~dP~~RPt~----~evl~~  784 (851)
                      ......+.+++.+||+.||.+||+.    .++++|
T Consensus       217 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~  251 (321)
T cd05603         217 GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNH  251 (321)
T ss_pred             CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCC
Confidence            4455678999999999999999975    466666

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-35  Score=326.51  Aligned_cols=248  Identities=24%  Similarity=0.355  Sum_probs=206.1

Q ss_pred             eeeeeeecceEEEEEEEc--Ccc--eeEEeecCCCChh-hHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecC
Q 047215          518 SLMIGVGGFGKVFKGEIE--DCT--LAAIKRANPQSEQ-GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~--~~~--~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      .++||+|.||.|++|.|.  +|+  .||||.+...... ...+|.+|+.+|.+|+|||+++|+|+... ..+.||+|+++
T Consensus       115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap  193 (1039)
T KOG0199|consen  115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP  193 (1039)
T ss_pred             HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence            457999999999999875  343  5799998876544 67899999999999999999999999987 78899999999


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc-
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH-  671 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~-  671 (851)
                      .|+|.+.|++.....+....+...|.|||.||.||.+   +++|||||..+|+||-....+||+||||.|.....+... 
T Consensus       194 lGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yv  270 (1039)
T KOG0199|consen  194 LGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYV  270 (1039)
T ss_pred             cchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCCCcceE
Confidence            9999999988666778888999999999999999996   899999999999999989999999999999765433332 


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCC-cCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR-AVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~-~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      ......-...|+|||.++...++.++|||+|||.||||+++. .||.+-....                +.+.+|..-+-
T Consensus       271 m~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q----------------IL~~iD~~erL  334 (1039)
T KOG0199|consen  271 MAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ----------------ILKNIDAGERL  334 (1039)
T ss_pred             ecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH----------------HHHhccccccC
Confidence            223344567899999999999999999999999999999964 4655433221                11223333334


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                      ..+..|++++.++++.||..+|.+|||+..+.+.+
T Consensus       335 pRPk~csedIY~imk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  335 PRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             CCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence            56788999999999999999999999999997553

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=2.4e-34  Score=309.52  Aligned_cols=247  Identities=26%  Similarity=0.395  Sum_probs=203.8

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .|+..+.||+|+||.||+|... .+..+++|..... .......+.+|+.++++++||||+++++++..++..++||||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            4566678999999999999865 5678899987644 3455678999999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++|+|.+++..   .++++.++..++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++.......  .
T Consensus        85 ~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~  156 (277)
T cd06640          85 GGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--I  156 (277)
T ss_pred             CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCc--c
Confidence            99999999854   357889999999999999999995   899999999999999999999999999987643321  1


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      ......++..|+|||++.+..++.++|+|||||++|||++|..|+....+....      .          .........
T Consensus       157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~------~----------~~~~~~~~~  220 (277)
T cd06640         157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL------F----------LIPKNNPPT  220 (277)
T ss_pred             ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh------h----------hhhcCCCCC
Confidence            223345788999999999889999999999999999999999988754332111      0          001111123


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .....+..+.+++.+||+.+|.+||++++++.|
T Consensus       221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         221 LTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             CchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            345667789999999999999999999999999

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.1e-35  Score=326.64  Aligned_cols=259  Identities=22%  Similarity=0.303  Sum_probs=195.5

Q ss_pred             HhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC------
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ------  581 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~------  581 (851)
                      ..++|...+.||+|+||.||+|.. ..+..+|||++...  .......+.+|++++++++||||+++++++...      
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            457888899999999999999986 45678999988653  223445678899999999999999999987533      


Q ss_pred             CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccc
Q 047215          582 NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla  661 (851)
                      ...++++|++ +++|.+++..   ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~  165 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLA  165 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCCccc
Confidence            4579999988 6789887743   358999999999999999999995   89999999999999999999999999999


Q ss_pred             ccCCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHh-----
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ-----  735 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~-----  735 (851)
                      +.....     .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+..  ..+.....     
T Consensus       166 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~  238 (343)
T cd07878         166 RQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQL--KRIMEVVGTPSPE  238 (343)
T ss_pred             eecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHH--HHHHHHhCCCCHH
Confidence            763321     233468999999999876 57899999999999999999999998654322111  11000000     


Q ss_pred             -----hhc-------ccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          736 -----KQR-------SLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       736 -----~~~-------~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                           ...       .+.......+. .......+.+.+|+.+||+.||.+|||+.|+++|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         239 VLKKISSEHARKYIQSLPHMPQQDLK-KIFRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             HHHhcchhhHHHHhhccccccchhHH-HhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                 000       00000000000 0001223457899999999999999999999999

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-34  Score=317.88  Aligned_cols=254  Identities=24%  Similarity=0.310  Sum_probs=204.9

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCCh---hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSE---QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||++...+ +..+++|.+.....   .....+..|++++++++||||+++++.+..++..++||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            368888999999999999998754 78899998876432   24567899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+.+++|.+++.......+++..+..++.|++.||.|||+   .+++||||||+||+++.++.++|+|||++.......
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~  157 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP  157 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence            99999999999876555678999999999999999999995   899999999999999999999999999986532211


Q ss_pred             cc---------------------------ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCC
Q 047215          669 HT---------------------------HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP  721 (851)
Q Consensus       669 ~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~  721 (851)
                      ..                           .......|+..|+|||++.+..++.++||||||+++|+|++|+.||.....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~  237 (316)
T cd05574         158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR  237 (316)
T ss_pred             cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence            00                           011123578899999999998999999999999999999999999865432


Q ss_pred             cchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCC----HHHHHHH
Q 047215          722 KDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT----MGEVLWH  784 (851)
Q Consensus       722 ~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt----~~evl~~  784 (851)
                      ...  +             ..+.............+..+.+++.+||+.+|++|||    ++|++.|
T Consensus       238 ~~~--~-------------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~  289 (316)
T cd05574         238 DET--F-------------SNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH  289 (316)
T ss_pred             HHH--H-------------HHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence            211  0             0111111111111225677999999999999999999    8999888

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=6e-35  Score=314.53  Aligned_cols=271  Identities=25%  Similarity=0.398  Sum_probs=205.3

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-----CcceeEEeecCCCChh-hHHHHHHHHHHHHhcCCcceeeEEEEEcc--CCcE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-----DCTLAAIKRANPQSEQ-GLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEM  584 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-----~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~--~~~~  584 (851)
                      ..|+..+.||+|+||.||+|++.     .+..+|+|.+...... ....|.+|++++++++||||+++++++..  +...
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            34666788999999999999864     3568899988765443 56789999999999999999999999977  5678


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      +++|||+++++|.+++.... ..+++.++..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||++...
T Consensus        84 ~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVL  159 (284)
T ss_pred             EEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence            99999999999999996543 358999999999999999999995   89999999999999999999999999999865


Q ss_pred             CCCCcc-ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          665 PSMEHT-HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       665 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      ...... .......++..|++||.+....++.++||||||++++||++|+.|+............. .........+.+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~  238 (284)
T cd05038         160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGI-AQGQMIVTRLLEL  238 (284)
T ss_pred             ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccc-ccccccHHHHHHH
Confidence            422111 11122345567999999988899999999999999999999998875432211000000 0000000000111


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      +........+..++..+.+++.+||+.+|.+|||+.|+++.|+.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         239 LKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            111111222344557799999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=5.6e-35  Score=312.31  Aligned_cols=253  Identities=25%  Similarity=0.393  Sum_probs=201.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      ++|...++||+|+||.||+|+.. ++..+++|.+..........+.+|+.+++.++||||+++++++..++..++|+||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            46677788999999999999864 57788999887665555667889999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++++|.+++...  ..+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++......  ..
T Consensus        89 ~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~--~~  161 (267)
T cd06645          89 GGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT--IA  161 (267)
T ss_pred             CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCc--cc
Confidence            999999988543  468899999999999999999995   89999999999999999999999999998653221  11


Q ss_pred             cccccccCCcccCccccc---ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          672 VSTAVKGSFGYLDPEYFW---RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~---~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                      ......|+..|+|||++.   ...++.++|||||||++|||++|+.|+....+....      ... ...   ....+..
T Consensus       162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~------~~~-~~~---~~~~~~~  231 (267)
T cd06645         162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL------FLM-TKS---NFQPPKL  231 (267)
T ss_pred             ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhH------Hhh-hcc---CCCCCcc
Confidence            223456899999999974   456889999999999999999999988654332211      000 000   0111111


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..  ....+..+.+++.+||+.+|++||+++++++|
T Consensus       232 ~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         232 KD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             cc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            11  11234568999999999999999999999988

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=7.5e-35  Score=313.31  Aligned_cols=246  Identities=26%  Similarity=0.386  Sum_probs=200.4

Q ss_pred             CceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecC
Q 047215          515 FDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      |+..+.||+|+||.||+|... ++..+|+|..... .....+.+.+|++++++++||||+++++++..++..++||||++
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            455667999999999999864 4678899987644 33455679999999999999999999999999999999999999


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccc
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~  672 (851)
                      +++|.+++..   ..+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++.......  ..
T Consensus        86 ~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--~~  157 (277)
T cd06642          86 GGSALDLLKP---GPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IK  157 (277)
T ss_pred             CCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcc--hh
Confidence            9999998854   358899999999999999999994   899999999999999999999999999987543211  12


Q ss_pred             ccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCC
Q 047215          673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY  752 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~  752 (851)
                      .....|+..|+|||++.+..++.++|||||||+++||++|+.|+....+....      ..          .........
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~------~~----------~~~~~~~~~  221 (277)
T cd06642         158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL------FL----------IPKNSPPTL  221 (277)
T ss_pred             hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH------hh----------hhcCCCCCC
Confidence            23345788999999999989999999999999999999999988654332110      00          000111122


Q ss_pred             ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       753 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ....+..+.+++.+||+.+|.+||++.++++|
T Consensus       222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         222 EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            33455678999999999999999999999999

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.1e-34  Score=307.87  Aligned_cols=247  Identities=26%  Similarity=0.406  Sum_probs=201.9

Q ss_pred             CceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC-----hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          515 FDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-----EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      |+..+.||+|+||.||+|... ++..+++|.+....     .+..+.+.+|+.++++++||||+++++++..+...++++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            566678999999999999876 67889999875432     335577999999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++++|.+++...  .++++.++..++.|++.||.|||+   .+++|+||+|+||+++.++.+||+|||++.......
T Consensus        82 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~  156 (258)
T cd06632          82 ELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS  156 (258)
T ss_pred             EecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence            999999999998543  358899999999999999999995   899999999999999999999999999987643322


Q ss_pred             ccccccccccCCcccCcccccccC-CCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~-~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                         ......|+..|++||.+.... ++.++|+||||+++|+|++|+.|+....+..      ..........        
T Consensus       157 ---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~------~~~~~~~~~~--------  219 (258)
T cd06632         157 ---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA------AVFKIGRSKE--------  219 (258)
T ss_pred             ---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH------HHHHHHhccc--------
Confidence               223456889999999987766 8999999999999999999999986543211      1111111000        


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       ....++.....+.+++.+||+.+|.+||++.+++.|
T Consensus       220 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         220 -LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             -CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence             112334455778999999999999999999999988

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=2.1e-34  Score=310.84  Aligned_cols=265  Identities=23%  Similarity=0.279  Sum_probs=201.3

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ++|+..+.||+|+||.||+|+.. +++.+++|++....  ....+.+.+|+.++++++||||+++++++..+...++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            46888889999999999999875 57889999876432  2234568899999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++++|..++...  ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++........
T Consensus        81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  155 (286)
T cd07847          81 YCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD  155 (286)
T ss_pred             ccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence            99999988876433  358999999999999999999995   8999999999999999999999999999876433221


Q ss_pred             cccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHH-H----HH---Hh-hhcc
Q 047215          670 THVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADW-A----MK---WQ-KQRS  739 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~-~----~~---~~-~~~~  739 (851)
                        ......++..|+|||++.+ ..++.++||||||+++|||++|+.||......+......- .    ..   .. ....
T Consensus       156 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (286)
T cd07847         156 --DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQF  233 (286)
T ss_pred             --cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccc
Confidence              1223457889999999876 5688999999999999999999999875443322111000 0    00   00 0000


Q ss_pred             cccccCccCCCCC-----ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          740 LKSIIDPHLKGNY-----SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       740 ~~~i~d~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ......+......     .+..+..+.+++.+||+.+|++||++.|++.|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence            0001111111000     01235678899999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=1.3e-34  Score=307.38  Aligned_cols=250  Identities=24%  Similarity=0.364  Sum_probs=204.3

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +|+..+.||+|+||.||+++.. +++.+++|++...  ......++.+|+.++++++||||+++++++...+..++|+||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            4778899999999999999864 5678899987643  334456889999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++.......+++.++++++.|++.||.|||+   .+++|+||+|+|||++.++.++|+|||++.......  
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~--  155 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV--  155 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch--
Confidence            999999999866554568899999999999999999995   899999999999999999999999999987543211  


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      .......|++.|+|||++.+..++.++|+|||||++++|++|+.|+......      +....... +.         ..
T Consensus       156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~~~~~~-~~---------~~  219 (256)
T cd08218         156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK------NLVLKIIR-GS---------YP  219 (256)
T ss_pred             hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH------HHHHHHhc-CC---------CC
Confidence            1122345788999999999889999999999999999999999988643221      11111111 00         01


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..+...+..+.+++.+||+.+|.+||++.++++|
T Consensus       220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         220 PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            1233455679999999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=1.9e-34  Score=309.67  Aligned_cols=255  Identities=27%  Similarity=0.435  Sum_probs=202.4

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC------cceeEEeecCCCChh-hHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED------CTLAAIKRANPQSEQ-GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~------~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      .+|+....||+|+||.||+|+.+.      .+.+++|........ ....+.+|++++++++||||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            568888899999999999998642      356888887665433 4578999999999999999999999999999999


Q ss_pred             EEEEecCCcchhhhccCCC-------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeec
Q 047215          586 LVYEYMANGTLRSHLFGSD-------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF  658 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~-------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DF  658 (851)
                      +||||+++|+|.+++....       ...+++.++..++.|++.||.|||+   .+++||||||+|||++.++.++++||
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEccc
Confidence            9999999999999986543       1268999999999999999999995   89999999999999999999999999


Q ss_pred             cccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhh
Q 047215          659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQ  737 (851)
Q Consensus       659 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~  737 (851)
                      |+++....... .......++..|+|||.+.+..++.++||||||++++||++ |..||.......   .   .... ..
T Consensus       162 ~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~---~---~~~~-~~  233 (275)
T cd05046         162 SLSKDVYNSEY-YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE---V---LNRL-QA  233 (275)
T ss_pred             ccccccCcccc-cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH---H---HHHH-Hc
Confidence            99875322111 11223346778999999988889999999999999999999 666765332111   1   1111 11


Q ss_pred             cccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          738 RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       738 ~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      +        .+....+..++..+.+++.+||+.+|.+||++.|++.+|.
T Consensus       234 ~--------~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         234 G--------KLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             C--------CcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            1        1111123345567999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.7e-34  Score=309.49  Aligned_cols=255  Identities=25%  Similarity=0.403  Sum_probs=199.7

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh----------hhHHHHHHHHHHHHhcCCcceeeEEEEEccCC
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE----------QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN  582 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~----------~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~  582 (851)
                      +|...+.||+|+||.||+|... ++..+++|.+.....          ...+.+.+|+.++++++|||++++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            3566778999999999999754 577899997653211          12346888999999999999999999999999


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      ..++||||+++++|.+++...  ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.++|+|||+++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~~~~  156 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGISK  156 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeeccccc
Confidence            999999999999999998654  468899999999999999999995   899999999999999999999999999987


Q ss_pred             cCCCCCccccccccccCCcccCcccccccC--CCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ--LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL  740 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  740 (851)
                      ...............|+..|+|||.+....  ++.++|+||||+++||+++|+.|+.......      ....... ...
T Consensus       157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~-~~~  229 (272)
T cd06629         157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA------AMFKLGN-KRS  229 (272)
T ss_pred             cccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH------HHHHhhc-ccc
Confidence            643322222223456889999999987654  8999999999999999999999885432111      0111100 001


Q ss_pred             ccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .    +..........+..+.+++.+||+.+|.+|||++++++|
T Consensus       230 ~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         230 A----PPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             C----CcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            1    111112223456779999999999999999999999999

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.7e-36  Score=333.99  Aligned_cols=258  Identities=24%  Similarity=0.357  Sum_probs=213.8

Q ss_pred             eeeeeeecceEEEEEEE-cCc----ceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          518 SLMIGVGGFGKVFKGEI-EDC----TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~-~~~----~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .++||+|+||+||||.+ .++    .+||||++... ..+...++.+|+-+|.+|+||||++|+|+|.... +.||++||
T Consensus       701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~m  779 (1177)
T KOG1025|consen  701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLM  779 (1177)
T ss_pred             hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhc
Confidence            56899999999999975 333    46889987654 5556688999999999999999999999998766 89999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      +.|+|.++++.++ ..+..+..+.++.|||+||.|||   ++.+|||||..+||||..-..+||.|||+++.........
T Consensus       780 P~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey  855 (1177)
T KOG1025|consen  780 PLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY  855 (1177)
T ss_pred             ccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence            9999999997754 56888999999999999999999   5999999999999999999999999999999877655554


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      ......-.+.|||-|.++...++.++|||||||.+|||+| |..|+......+..+                ++....+-
T Consensus       856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~d----------------lle~geRL  919 (1177)
T KOG1025|consen  856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPD----------------LLEKGERL  919 (1177)
T ss_pred             cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhH----------------HHhccccC
Confidence            4455556778999999999999999999999999999999 566666543332211                12222223


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhc
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWM  796 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~  796 (851)
                      ..++-|..++..++.+||..|+..||+++++...+....+....++
T Consensus       920 sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqryl  965 (1177)
T KOG1025|consen  920 SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQRYL  965 (1177)
T ss_pred             CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcceEe
Confidence            4567888899999999999999999999999999887765554443

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.5e-34  Score=308.80  Aligned_cols=249  Identities=27%  Similarity=0.409  Sum_probs=199.7

Q ss_pred             CceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh---------hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcE
Q 047215          515 FDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE---------QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~---------~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~  584 (851)
                      |.....||+|++|.||+|... ++..+++|.+.....         ...+.+.+|+.++++++||||+++++++...+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            555678999999999999864 567889997764322         2235688999999999999999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ++|+||+++++|.+++...  ..+++..+..++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++..
T Consensus        82 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~  156 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISKKL  156 (267)
T ss_pred             EEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence            9999999999999999543  468889999999999999999995   89999999999999999999999999998764


Q ss_pred             CCCCc----cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc
Q 047215          665 PSMEH----THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL  740 (851)
Q Consensus       665 ~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  740 (851)
                      .....    ........|+..|+|||.+.+..++.++|||||||++|||++|+.||........      ....      
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~------~~~~------  224 (267)
T cd06628         157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA------IFKI------  224 (267)
T ss_pred             ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH------HHHH------
Confidence            32111    1111234588899999999988999999999999999999999999875322110      0000      


Q ss_pred             ccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .....    ...+...+..+.+++.+||+.+|.+||++.|+++|
T Consensus       225 ~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         225 GENAS----PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             hccCC----CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence            00111    12334456778999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=1.7e-34  Score=306.35  Aligned_cols=250  Identities=26%  Similarity=0.370  Sum_probs=204.8

Q ss_pred             CCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +|+..++||+|+||.||.++. +++..+++|.+...  .......+.+|++++++++|+||+++++++.+.+..+++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            477889999999999998875 45678899986543  345567789999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++|+|.+++.......+++.++..++.|++.||.|||+   .+++||||||+||++++++.+||+|||++........ 
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~-  156 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS-  156 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence            999999999976545678999999999999999999995   8999999999999999999999999999876433221 


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                       ......+++.|+|||++.+..++.++||||||+++|||++|+.|+......+      ...... .+        ... 
T Consensus       157 -~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~------~~~~~~-~~--------~~~-  219 (256)
T cd08221         157 -MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN------LVVKIV-QG--------NYT-  219 (256)
T ss_pred             -cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHH-cC--------CCC-
Confidence             2234568999999999988889999999999999999999999886543221      111111 11        111 


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..+...+..+.+++.+||+.+|.+||++++++++
T Consensus       220 ~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         220 PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             CCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            1123445678999999999999999999999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=4.9e-35  Score=323.45  Aligned_cols=255  Identities=20%  Similarity=0.260  Sum_probs=198.4

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+++.. .+..+|+|.+...   .......+.+|+.++..++|+||+++++++..++..++||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            47889999999999999999875 4677899987642   2233456888999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++.... ..+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus        81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~  156 (331)
T cd05624          81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG  156 (331)
T ss_pred             eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence            9999999999996532 358888999999999999999995   999999999999999999999999999987543221


Q ss_pred             ccccccccccCCcccCcccccc-----cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWR-----QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                       ........||+.|+|||++.+     ..++.++|||||||+||||++|+.||......+      .........  ..+
T Consensus       157 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~------~~~~i~~~~--~~~  227 (331)
T cd05624         157 -TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHE--ERF  227 (331)
T ss_pred             -ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH------HHHHHHcCC--Ccc
Confidence             112233569999999999875     568899999999999999999999987543211      111111100  000


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKN--RPTMGEVLWH  784 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~  784 (851)
                         .+. ......++.+.+++.+||..++.+  |++++++++|
T Consensus       228 ---~~p-~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         228 ---QFP-SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             ---cCC-CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence               011 111234567889999999866544  5689999998

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=4.3e-35  Score=311.88  Aligned_cols=238  Identities=25%  Similarity=0.396  Sum_probs=188.9

Q ss_pred             eeeeecceEEEEEEEcC--------cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          520 MIGVGGFGKVFKGEIED--------CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~~--------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .||+|+||.||+|....        ...+++|..........+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus         2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~   81 (258)
T cd05078           2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV   81 (258)
T ss_pred             CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence            59999999999997642        2347788876655555678899999999999999999999999989999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe--------EEEeecccccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV--------AKMSDFGLSKT  663 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~--------~kl~DFGla~~  663 (851)
                      ++|+|.+++.... ..+++..+++++.|++.||.|||+   ++|+||||||+|||++.++.        ++++|||++..
T Consensus        82 ~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078          82 KFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             CCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence            9999999986543 368899999999999999999994   99999999999999987665        69999998865


Q ss_pred             CCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCc-CCCCCCCcchhcHHHHHHHHhhhcccc
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARA-VINPTLPKDQINLADWAMKWQKQRSLK  741 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~-p~~~~~~~~~~~l~~~~~~~~~~~~~~  741 (851)
                      ...      .....++..|+|||++.+ ..++.++|||||||++|||++|.. |+....+...      .. ....    
T Consensus       158 ~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~------~~-~~~~----  220 (258)
T cd05078         158 VLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK------LQ-FYED----  220 (258)
T ss_pred             cCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH------HH-HHHc----
Confidence            322      123457889999999986 458999999999999999999964 4332221110      00 0000    


Q ss_pred             cccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          742 SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       742 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                             ....+......+.+++.+||+.+|.+|||++++++.|
T Consensus       221 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         221 -------RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             -------cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence                   0112233345689999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=1e-34  Score=325.36  Aligned_cols=262  Identities=21%  Similarity=0.288  Sum_probs=196.6

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC------C
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ------N  582 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~------~  582 (851)
                      .++|...+.||+|+||.||++... .+..+|||++...  .......+.+|+.+++.++||||+++++++...      .
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            468999999999999999999864 5678899988653  334456788999999999999999999987543      3


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      ..++||||+++ +|.+.+.    ..+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++
T Consensus       103 ~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~  174 (364)
T cd07875         103 DVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  174 (364)
T ss_pred             eEEEEEeCCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence            57999999976 6666663    247788999999999999999995   899999999999999999999999999997


Q ss_pred             cCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHH---------HHHHH
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLA---------DWAMK  733 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~---------~~~~~  733 (851)
                      ....   ........||..|+|||++.+..++.++|||||||++|||++|+.||......+.....         ++...
T Consensus       175 ~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (364)
T cd07875         175 TAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK  251 (364)
T ss_pred             ccCC---CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence            6322   11223456899999999999999999999999999999999999999754332211000         00000


Q ss_pred             -------Hhhh-ccc-----ccccCccC---CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          734 -------WQKQ-RSL-----KSIIDPHL---KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       734 -------~~~~-~~~-----~~i~d~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                             .... ...     ..+....+   ...........+++++.+||+.||.+|||+.|+++|
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             hhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence                   0000 000     00000000   001111234568999999999999999999999999

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=1.7e-34  Score=308.84  Aligned_cols=253  Identities=24%  Similarity=0.386  Sum_probs=200.3

Q ss_pred             CCceeeeeeeecceEEEEEEEcC--cceeEEeecCCC----------ChhhHHHHHHHHHHHHh-cCCcceeeEEEEEcc
Q 047215          514 NFDESLMIGVGGFGKVFKGEIED--CTLAAIKRANPQ----------SEQGLAEFETEIEMLSK-LRHRHLVSLIGFCDE  580 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~~--~~~vavK~~~~~----------~~~~~~~~~~Ei~~l~~-l~HpnIv~l~g~~~~  580 (851)
                      +|+..+.||+|+||.||+|..+.  ++.+++|.+...          ......++.+|+.++.+ ++||||+++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            36677889999999999999765  577888876532          22344567889998875 799999999999999


Q ss_pred             CCcEEEEEEecCCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeec
Q 047215          581 QNEMILVYEYMANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF  658 (851)
Q Consensus       581 ~~~~~lV~Ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DF  658 (851)
                      ++..+++|||+++++|.+++..  .....+++.++++++.|++.||.|||+  ..+++|+||||+||+++.++.+||+||
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~df  158 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDF  158 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecc
Confidence            9999999999999999988743  233568899999999999999999995  468999999999999999999999999


Q ss_pred             cccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhc
Q 047215          659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR  738 (851)
Q Consensus       659 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~  738 (851)
                      |++.......   ......|+..|+|||++.+..++.++||||||+++|||++|+.|+......      .......   
T Consensus       159 g~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~------~~~~~~~---  226 (269)
T cd08528         159 GLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML------SLATKIV---  226 (269)
T ss_pred             cceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH------HHHHHHh---
Confidence            9987643322   233456889999999999888999999999999999999999988643221      1111111   


Q ss_pred             ccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          739 SLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       739 ~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                            +...........+..+.+++.+||+.||++||++.|+..+++
T Consensus       227 ------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         227 ------EAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             ------hccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence                  111110011133466899999999999999999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=5.5e-35  Score=323.21  Aligned_cols=255  Identities=20%  Similarity=0.254  Sum_probs=197.3

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..++||+|+||.||+++.+. +..+|+|.+...   .......+..|+.++..++|+||+++++++...+..++||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            468889999999999999998764 567889987542   2233456888999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++.... ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||++...... 
T Consensus        81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~-  155 (332)
T cd05623          81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED-  155 (332)
T ss_pred             eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecccC-
Confidence            9999999999996532 358889999999999999999995   99999999999999999999999999998653221 


Q ss_pred             ccccccccccCCcccCccccc-----ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFW-----RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      .........||+.|+|||++.     ...++.++|||||||++|||++|+.||......+      .........  ...
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~------~~~~i~~~~--~~~  227 (332)
T cd05623         156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHK--ERF  227 (332)
T ss_pred             CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH------HHHHHhCCC--ccc
Confidence            111223456999999999986     3468899999999999999999999987543211      111111110  000


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKN--RPTMGEVLWH  784 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~  784 (851)
                      .   . ......++..+.+++.+|+..++.+  |++++|+++|
T Consensus       228 ~---~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         228 Q---F-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             c---C-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            0   0 0111234567889999988654443  7899999999

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=3.8e-35  Score=323.47  Aligned_cols=242  Identities=24%  Similarity=0.332  Sum_probs=189.3

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHH-HHHHhcCCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEI-EMLSKLRHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei-~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      +.||+|+||.||+++.. ++..+|+|++....   ......+..|. .+++.++||||+++++++..++..++||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            36999999999999875 45678999876431   12223444444 456788999999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |+|.+++...  ..+.+.+...++.|+++||+|||+   .+|+||||||+|||++.++.+||+|||+++....  .....
T Consensus        81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~--~~~~~  153 (325)
T cd05602          81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE--HNGTT  153 (325)
T ss_pred             CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCccccc--CCCCc
Confidence            9999998553  357788888999999999999995   8999999999999999999999999999875322  11223


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS  753 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  753 (851)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+   .   .....         ...  ....
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~---~~~i~---------~~~--~~~~  216 (325)
T cd05602         154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---M---YDNIL---------NKP--LQLK  216 (325)
T ss_pred             ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH---H---HHHHH---------hCC--cCCC
Confidence            45679999999999999999999999999999999999999987543211   1   11110         000  1122


Q ss_pred             hhHHHHHHHHHHHhcccCCCCCCCHH----HHHHH
Q 047215          754 PESLEKFGEIAEKCLDDEGKNRPTMG----EVLWH  784 (851)
Q Consensus       754 ~~~~~~l~~l~~~Cl~~dP~~RPt~~----evl~~  784 (851)
                      +..+..+.+++.+||+.+|.+||++.    ++++|
T Consensus       217 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~  251 (325)
T cd05602         217 PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNH  251 (325)
T ss_pred             CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcC
Confidence            34556789999999999999999876    45554

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=4.7e-34  Score=305.77  Aligned_cols=252  Identities=22%  Similarity=0.305  Sum_probs=189.0

Q ss_pred             eeeeecceEEEEEEEcCc---ceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcc
Q 047215          520 MIGVGGFGKVFKGEIEDC---TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT  595 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~~~---~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gs  595 (851)
                      .||+|+||.||+|...++   ..+++|.+... .....+.|.+|+.+++.++||||+++++.|......++||||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            599999999999975443   34567766543 23456789999999999999999999999999999999999999999


Q ss_pred             hhhhccCCC--CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          596 LRSHLFGSD--LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       596 L~~~L~~~~--~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |.+++....  .....+..+..++.|+++||+|||+   .+++||||||+|||++.++.+||+|||++............
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  158 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE  158 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence            999986532  2346677788999999999999995   89999999999999999999999999998642221111122


Q ss_pred             cccccCCcccCcccccc-------cCCCchHHHHHHHHHHHHHHhC-CcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          674 TAVKGSFGYLDPEYFWR-------QQLTEKSDVYSFGVVLFEVVCA-RAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~-------~~~t~ksDVwS~GvvL~eLltG-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ....++..|+|||++..       ..++.++|||||||++|||+++ ..|+....+.      +...... .+....+.+
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~------~~~~~~~-~~~~~~~~~  231 (268)
T cd05086         159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR------EVLNHVI-KDQQVKLFK  231 (268)
T ss_pred             cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHH-hhcccccCC
Confidence            34567889999998753       2467899999999999999975 4455433221      1111111 111222333


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      +.+.    ....+.+.+++..|| .+|.+||+++++++.|.
T Consensus       232 ~~~~----~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         232 PQLE----LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CccC----CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            4333    234456888999999 67999999999988763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.6e-34  Score=312.13  Aligned_cols=263  Identities=25%  Similarity=0.336  Sum_probs=203.8

Q ss_pred             cCHHHHHHHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEc-
Q 047215          503 FTLAEIRVATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCD-  579 (851)
Q Consensus       503 ~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~-  579 (851)
                      +.++.+..+.++|+..+.||+|+||.||++... .++.+++|...... .....+.+|+.+++++ +||||+++++++. 
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            445566667899999999999999999999864 56788999876432 2235688899999999 6999999999873 


Q ss_pred             ----cCCcEEEEEEecCCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeE
Q 047215          580 ----EQNEMILVYEYMANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA  653 (851)
Q Consensus       580 ----~~~~~~lV~Ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~  653 (851)
                          .++..++||||+++++|.+++..  .....+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~  163 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGV  163 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCCE
Confidence                44678999999999999988753  223468889999999999999999995   899999999999999999999


Q ss_pred             EEeeccccccCCCCCccccccccccCCcccCcccccc-----cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHH
Q 047215          654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR-----QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLA  728 (851)
Q Consensus       654 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~  728 (851)
                      ||+|||+++......  .......|++.|+|||++..     ..++.++|||||||++|||++|+.|+....+....  .
T Consensus       164 kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~--~  239 (286)
T cd06638         164 KLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL--F  239 (286)
T ss_pred             EEccCCceeecccCC--CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH--h
Confidence            999999987543221  11233468999999999853     45789999999999999999999998754322110  0


Q ss_pred             HHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          729 DWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       729 ~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                          ..      .....+.+  ..+......+.+++.+||+.+|++|||+.|+++|+
T Consensus       240 ----~~------~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~  284 (286)
T cd06638         240 ----KI------PRNPPPTL--HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV  284 (286)
T ss_pred             ----hc------cccCCCcc--cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence                00      00000111  01122345689999999999999999999999983

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=4.8e-34  Score=303.90  Aligned_cols=253  Identities=25%  Similarity=0.381  Sum_probs=207.5

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCCh-hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSE-QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++|+..+.||+|++|.||+++..+ ++.+++|++..... .....+.+|+.++++++||||+++++++..++..++|+||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            468888999999999999998764 78899998876543 4567899999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++...  ..+++..+..++.|+++||.|||+  ..+++||||+|+||+++.++.++|+|||++........ 
T Consensus        81 ~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~--~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~-  155 (264)
T cd06623          81 MDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHT--KRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD-  155 (264)
T ss_pred             cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhc--cCCCccCCCCHHHEEECCCCCEEEccCccceecccCCC-
Confidence            9999999999654  568999999999999999999993  28999999999999999999999999999876432221 


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                       ......++..|+|||.+....++.++|+||||+++|||++|+.|+..........+..+..         ....+    
T Consensus       156 -~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~---------~~~~~----  221 (264)
T cd06623         156 -QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC---------DGPPP----  221 (264)
T ss_pred             -cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh---------cCCCC----
Confidence             1124457889999999999999999999999999999999999987654212111111111         00111    


Q ss_pred             CCChh-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          751 NYSPE-SLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       751 ~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..+.. .+..+.+++.+||+.+|++||++.++++|
T Consensus       222 ~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         222 SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            12223 55679999999999999999999999999

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.7e-34  Score=305.65  Aligned_cols=255  Identities=27%  Similarity=0.410  Sum_probs=206.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      .++|+..+.||+|+||.||+|... ++..+++|..........+.+.+|++++++++||||+++++++..++..+++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            367888999999999999999864 4677899988766555678899999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++.... ..+++.++..++.|++.||.|||+   .+++|+||||+||++++++.+||+|||++......  .
T Consensus        82 ~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~--~  155 (262)
T cd06613          82 CGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT--I  155 (262)
T ss_pred             CCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhh--h
Confidence            99999999885542 468899999999999999999994   89999999999999999999999999998753321  1


Q ss_pred             ccccccccCCcccCccccccc---CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQ---QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~---~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                      .......++..|+|||.+...   .++.++||||||+++|||++|+.|+....+.....      .. ....   ...+.
T Consensus       156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~------~~-~~~~---~~~~~  225 (262)
T cd06613         156 AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF------LI-SKSN---FPPPK  225 (262)
T ss_pred             hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH------HH-Hhcc---CCCcc
Confidence            122345678899999999776   89999999999999999999999987544322110      00 0000   00111


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +  ......+..+.+++.+||+.+|.+|||+++++.|
T Consensus       226 ~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         226 L--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             c--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            1  1223445679999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-36  Score=324.30  Aligned_cols=244  Identities=27%  Similarity=0.399  Sum_probs=200.1

Q ss_pred             CceeeeeeeecceEEEEEEE-cCcceeEEeecCCCCh---hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          515 FDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSE---QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      |...+.||.|+||.||.|+. .+...||||+++-...   ..+.++..|++.|++++|||+|.+.|++..+...||||||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            55566799999999999985 4567899999886543   4467899999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      |-| +-.|+|.-. .+++.+.++..|+.+++.||.||||   ++.||||||+.||||++.|.|||+|||.|....+    
T Consensus       108 ClG-SAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P----  178 (948)
T KOG0577|consen  108 CLG-SASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP----  178 (948)
T ss_pred             Hhc-cHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCc----
Confidence            954 666665322 2568899999999999999999996   9999999999999999999999999999876433    


Q ss_pred             ccccccccCCcccCccccc---ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          671 HVSTAVKGSFGYLDPEYFW---RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~---~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                        ...+.|||.|||||++.   .+.|+-|+||||||++..||.-.++|+........      .-..      ..--.|.
T Consensus       179 --AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA------LYHI------AQNesPt  244 (948)
T KOG0577|consen  179 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHI------AQNESPT  244 (948)
T ss_pred             --hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH------HHHH------HhcCCCC
Confidence              23568999999999986   56899999999999999999999988754322111      0000      0111233


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +.   +.+-+..++.++..||++-|.+|||.++++.|
T Consensus       245 Lq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H  278 (948)
T KOG0577|consen  245 LQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH  278 (948)
T ss_pred             CC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence            33   45677889999999999999999999999988

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.4e-34  Score=307.23  Aligned_cols=236  Identities=25%  Similarity=0.403  Sum_probs=187.2

Q ss_pred             eeeeecceEEEEEEEcCcc-----------eeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          520 MIGVGGFGKVFKGEIEDCT-----------LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~~~~-----------~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      .||+|+||.||+|...+..           .+++|........ ...|.+|+.++++++||||++++++|.. ...++||
T Consensus         2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~   79 (259)
T cd05037           2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE   79 (259)
T ss_pred             cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence            6899999999999876433           4667766554333 6788999999999999999999999988 7889999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC-------eEEEeecccc
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF-------VAKMSDFGLS  661 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~-------~~kl~DFGla  661 (851)
                      ||+++|+|.+++..... .+++..+..++.|++.||.|||+   ++++||||||+|||++.++       .+||+|||++
T Consensus        80 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a  155 (259)
T cd05037          80 EYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP  155 (259)
T ss_pred             EcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence            99999999999865432 68899999999999999999994   8999999999999999887       7999999998


Q ss_pred             ccCCCCCccccccccccCCcccCccccccc--CCCchHHHHHHHHHHHHHHhC-CcCCCCCCCcchhcHHHHHHHHhhhc
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ--QLTEKSDVYSFGVVLFEVVCA-RAVINPTLPKDQINLADWAMKWQKQR  738 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~t~ksDVwS~GvvL~eLltG-~~p~~~~~~~~~~~l~~~~~~~~~~~  738 (851)
                      +....      .....++..|+|||++...  .++.++||||||+++|||++| ..|+......+      +...+. ..
T Consensus       156 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~------~~~~~~-~~  222 (259)
T cd05037         156 ITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE------KERFYQ-DQ  222 (259)
T ss_pred             ccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh------HHHHHh-cC
Confidence            76332      1223466789999999876  789999999999999999995 55554432211      111111 00


Q ss_pred             ccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          739 SLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       739 ~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                        .         ..+......+.+++.+||..+|.+|||+.++++.|
T Consensus       223 --~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         223 --H---------RLPMPDCAELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             --C---------CCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence              0         01111126789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=1.7e-34  Score=312.92  Aligned_cols=262  Identities=28%  Similarity=0.363  Sum_probs=205.1

Q ss_pred             cCHHHHHHHhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEcc
Q 047215          503 FTLAEIRVATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDE  580 (851)
Q Consensus       503 ~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~  580 (851)
                      +++.++..++++|+..+.||+|+||.||++.. ++++.+++|....... ....+.+|+.+++++ +|||++++++++..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            45566667789999999999999999999987 4577889998765432 245678899999999 89999999999864


Q ss_pred             C-----CcEEEEEEecCCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeE
Q 047215          581 Q-----NEMILVYEYMANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA  653 (851)
Q Consensus       581 ~-----~~~~lV~Ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~  653 (851)
                      .     ...++|+||+++|+|.++++.  .....+++..+..++.|++.||+|||+   .+++||||||+||+++.++.+
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~~  167 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGGV  167 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCE
Confidence            3     358999999999999998853  223568899999999999999999994   899999999999999999999


Q ss_pred             EEeeccccccCCCCCccccccccccCCcccCccccccc-----CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHH
Q 047215          654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ-----QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLA  728 (851)
Q Consensus       654 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~  728 (851)
                      ||+|||+++.......  ......|+..|+|||++...     .++.++|||||||++|||++|+.|+....+...  +.
T Consensus       168 kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~--~~  243 (291)
T cd06639         168 KLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT--LF  243 (291)
T ss_pred             EEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH--HH
Confidence            9999999876432211  12234688899999998643     368999999999999999999999875432211  11


Q ss_pred             HHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          729 DWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       729 ~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                          .... ...     +.+  ..+......+.+++.+||+.+|++||++.|+++|
T Consensus       244 ----~~~~-~~~-----~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         244 ----KIPR-NPP-----PTL--LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             ----HHhc-CCC-----CCC--CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence                1100 000     111  1123344569999999999999999999999999

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=8.8e-35  Score=310.14  Aligned_cols=254  Identities=24%  Similarity=0.351  Sum_probs=204.0

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++|+..+.||+|+||.||++... +++.+++|++.... ......+.+|++++++++||||+++++.+..++..++++||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            35677788999999999999875 57788999877653 34556789999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++.... ..+++..+.+++.|++.||.|||+  ..+++|+||||+||++++++.+||+|||++......   
T Consensus        81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~--~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~---  154 (265)
T cd06605          81 MDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS---  154 (265)
T ss_pred             cCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcC--CCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH---
Confidence            99999999986543 568899999999999999999994  389999999999999999999999999998653211   


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                       ......++..|+|||++.+..++.++||||||+++++|++|+.|+....... ....+........      ..+.   
T Consensus       155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~------~~~~---  223 (265)
T cd06605         155 -LAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP-DGIFELLQYIVNE------PPPR---  223 (265)
T ss_pred             -HhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc-ccHHHHHHHHhcC------CCCC---
Confidence             1112568889999999999999999999999999999999999986543211 1111111111110      0111   


Q ss_pred             CCChh-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          751 NYSPE-SLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       751 ~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       .+.. .+..+.+++.+||..+|++|||+.+++.|
T Consensus       224 -~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         224 -LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             -CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence             1122 55668999999999999999999999999

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=2.9e-34  Score=314.87  Aligned_cols=260  Identities=20%  Similarity=0.255  Sum_probs=186.1

Q ss_pred             eeeeeecceEEEEEEEcC---cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEc--cCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIED---CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD--EQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~---~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~--~~~~~~lV~Ey~~~  593 (851)
                      .+||+|+||.||+|+..+   +..+|+|.+.....  ...+.+|++++++++||||+++++++.  .+...++|+||+++
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH   84 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence            479999999999998653   36789998765432  245788999999999999999999884  45678999999875


Q ss_pred             cchhhhccCC-------CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE----cCCCeEEEeeccccc
Q 047215          594 GTLRSHLFGS-------DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL----DENFVAKMSDFGLSK  662 (851)
Q Consensus       594 gsL~~~L~~~-------~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl----d~~~~~kl~DFGla~  662 (851)
                       +|.+++...       ....+++..+..++.|++.||.|||+   .+|+||||||+|||+    +.++.+||+|||+++
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07867          85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence             666665321       22357888999999999999999995   899999999999999    567799999999998


Q ss_pred             cCCCCCc-cccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcch-------hcHHHHHHH
Q 047215          663 TGPSMEH-THVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ-------INLADWAMK  733 (851)
Q Consensus       663 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~-------~~l~~~~~~  733 (851)
                      ....... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||........       ..+......
T Consensus       161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~  240 (317)
T cd07867         161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSV  240 (317)
T ss_pred             ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHh
Confidence            6432211 111234568999999999876 4589999999999999999999999864322110       000000000


Q ss_pred             -----------HhhhcccccccC---------ccC---CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          734 -----------WQKQRSLKSIID---------PHL---KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       734 -----------~~~~~~~~~i~d---------~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                                 ............         +.+   ...........+.+|+.+||+.||.+|||++|+++|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h  314 (317)
T cd07867         241 MGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD  314 (317)
T ss_pred             cCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence                       000000000000         000   000011223458889999999999999999999999

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=3.4e-34  Score=306.00  Aligned_cols=251  Identities=24%  Similarity=0.343  Sum_probs=198.0

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-----ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC--CcE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-----SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ--NEM  584 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--~~~  584 (851)
                      .+|+..++||+|+||.||+|... ++..+++|.+...     .....+.+.+|+.++++++||||+++++++.+.  ..+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            57888999999999999999864 4778999976532     223456788999999999999999999988653  567


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      +++|||+++++|.+++...  ..+++....+++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++..
T Consensus        82 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~  156 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGASKRL  156 (265)
T ss_pred             EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence            8999999999999998543  357888899999999999999995   89999999999999999999999999998753


Q ss_pred             CCCCc-cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          665 PSMEH-THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       665 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      ..... ........|+..|+|||.+.+..++.++|||||||++|||++|+.||........      ....         
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~~~~---------  221 (265)
T cd06652         157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA------IFKI---------  221 (265)
T ss_pred             ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH------HHHH---------
Confidence            32111 1112234588999999999888899999999999999999999999864321110      0000         


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .........+......+.+++.+|+. +|++||+++++++|
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         222 ATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             hcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence            00011122344555678899999995 89999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.8e-35  Score=310.45  Aligned_cols=258  Identities=21%  Similarity=0.349  Sum_probs=218.0

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .-|+..+.||+|.|..|-+|++ -.|..||||++.+..  ......+.+|++.|+.++|||||+|+.+......+|||+|
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            3455667899999999999975 467889999988763  3344568899999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE-cCCCeEEEeeccccccCCCCC
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL-DENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl-d~~~~~kl~DFGla~~~~~~~  668 (851)
                      .-++|+|+++|.++. ..+.+....+.+.||+.|+.|+|   +..+|||||||+||.+ .+-|-+||.|||++-...+  
T Consensus        98 LGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P--  171 (864)
T KOG4717|consen   98 LGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP--  171 (864)
T ss_pred             ecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCCC--
Confidence            999999999997665 35888999999999999999999   5899999999999887 6778999999999865333  


Q ss_pred             ccccccccccCCcccCcccccccCCC-chHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t-~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                       .....+.||++.|-|||++.+..|+ +++||||||||||-|+||++||+.....+               .+..|+|-+
T Consensus       172 -G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE---------------TLTmImDCK  235 (864)
T KOG4717|consen  172 -GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE---------------TLTMIMDCK  235 (864)
T ss_pred             -cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh---------------hhhhhhccc
Confidence             2334678999999999999998886 57899999999999999999998654433               234456654


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCCCCC
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQN  803 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~~~~  803 (851)
                      +  ..|...+.++++||..||..||.+|.+.+|+..+         +|++..++..
T Consensus       236 Y--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~---------~Wlq~~D~~~  280 (864)
T KOG4717|consen  236 Y--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST---------SWLQAGDRGL  280 (864)
T ss_pred             c--cCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc---------ccccCCCCCc
Confidence            4  4567788889999999999999999999999998         9988766544

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=1.9e-34  Score=305.67  Aligned_cols=249  Identities=25%  Similarity=0.370  Sum_probs=203.0

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +|+..+.||+|+||.||++... .+..+++|.+...  .......+.+|++++++++||||+++++.+..++..++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            4778899999999999999864 5677899987654  344567899999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-CCeEEEeeccccccCCCCCc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-NFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-~~~~kl~DFGla~~~~~~~~  669 (851)
                      +++++|.+++.......+++.++.+++.+++.+|.|||+   ++++||||||+||++++ ++.+||+|||++....... 
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-  156 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS-  156 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence            999999999976555668999999999999999999995   89999999999999975 4568999999987643221 


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                        ......++..|+|||.+.+..++.++||||||+++|+|++|+.|+.......      ....... ..         .
T Consensus       157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~------~~~~~~~-~~---------~  218 (256)
T cd08220         157 --KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA------LVLKIMS-GT---------F  218 (256)
T ss_pred             --cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH------HHHHHHh-cC---------C
Confidence              1223568889999999998889999999999999999999999886543221      1111111 00         0


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ...+...+..+.+++.+||+.+|.+|||+.|+++|
T Consensus       219 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         219 APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            11223355678999999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=2e-34  Score=311.03  Aligned_cols=262  Identities=23%  Similarity=0.332  Sum_probs=199.4

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +|+..+.||+|++|.||+|+.. +++.++||++....  ......+.+|++++++++||||+++++++..++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            4788899999999999999864 57889999876432  23345788999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +. ++|.+++.......+++.++..++.|++.||+|||+   .+++||||+|+||+++.++.+||+|||+++....... 
T Consensus        81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~-  155 (284)
T cd07860          81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-  155 (284)
T ss_pred             cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc-
Confidence            96 688888866555678999999999999999999995   8999999999999999999999999999875332111 


Q ss_pred             ccccccccCCcccCcccccccC-CCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh------------
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ------------  737 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~-~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~------------  737 (851)
                       ......++..|+|||++.+.. ++.++|||||||++|||+||+.||......+.  +..........            
T Consensus       156 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
T cd07860         156 -TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ--LFRIFRTLGTPDEVVWPGVTSLP  232 (284)
T ss_pred             -ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHhCCCChhhhhhhhHHH
Confidence             122334688999999887644 68999999999999999999998865432211  11111100000            


Q ss_pred             ---cccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          738 ---RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       738 ---~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                         ..........+ ....+.....+.+++.+||+.||.+|||+++++.|
T Consensus       233 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         233 DYKPSFPKWARQDF-SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             HHHhhcccccccCH-HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence               00000000000 00112234567899999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=3.2e-34  Score=305.83  Aligned_cols=257  Identities=26%  Similarity=0.370  Sum_probs=206.0

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++|+..+.||.|+||+||+|... ++..+++|++... .......+.+|+++++.++|+||+++++.+..++..++|+|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            46888999999999999999864 5678899987643 233567899999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCC-CCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          591 MANGTLRSHLFGSDL-PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~-~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      +++++|.+++..... ..+++..+..++.|++.||.|||+   .+++||||||+||++++++.+||+|||++........
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~  157 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD  157 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence            999999999865432 568999999999999999999994   8999999999999999999999999999875443222


Q ss_pred             c--ccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          670 T--HVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       670 ~--~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      .  .......|+..|+|||++... .++.++|+|||||+++||++|+.|+....+...  +.+.    ...      ..+
T Consensus       158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~~~----~~~------~~~  225 (267)
T cd06610         158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV--LMLT----LQN------DPP  225 (267)
T ss_pred             ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh--HHHH----hcC------CCC
Confidence            1  122344688999999998876 789999999999999999999999875433211  1110    000      111


Q ss_pred             cCCCCC-ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          747 HLKGNY-SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       747 ~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .+.... ....+..+.+++.+||+.||.+||+++++++|
T Consensus       226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         226 SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            111111 12455778999999999999999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=8.3e-34  Score=307.01  Aligned_cols=263  Identities=25%  Similarity=0.347  Sum_probs=204.7

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc--CCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~--~~~~~lV~  588 (851)
                      ++|+..+.||.|++|.||++... .++.+++|.+... .......+.+|++++++++||||++++++|..  .+.+++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            46888899999999999999974 5678899987654 33445678999999999999999999998854  44789999


Q ss_pred             EecCCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          589 EYMANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       589 Ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||+++++|.+++..  .....+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++.....
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  157 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN  157 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence            99999999888643  233568889999999999999999995   8999999999999999999999999999865322


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCc--chhcHHHHHHHHhhhccccccc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPK--DQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~--~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      ..    .....++..|+|||.+.+..++.++||||||+++|||++|+.|+......  ....+..+...    .....+.
T Consensus       158 ~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~  229 (287)
T cd06621         158 SL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN----MPNPELK  229 (287)
T ss_pred             cc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc----CCchhhc
Confidence            11    12345788999999999999999999999999999999999998755321  11122222111    0000110


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      +. .  ......++.+.+++.+||+.+|.+|||+.|+++|         +|+..
T Consensus       230 ~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~---------~~~~~  271 (287)
T cd06621         230 DE-P--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH---------PWIKA  271 (287)
T ss_pred             cC-C--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC---------ccccc
Confidence            00 0  0012345678999999999999999999999999         88754

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.8e-35  Score=315.71  Aligned_cols=252  Identities=25%  Similarity=0.375  Sum_probs=207.3

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCC--CChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANP--QSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~--~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ..|++.++||+||.+.||++...+.+.+|+|+...  .+.+....|..|+..|.+| .|.+||+|++|-..++.+|||||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            45777889999999999999998888888887654  4667778899999999999 49999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |-+. +|..+|.........| .+..+..|++.++.++|   +++|||.||||.|+|+-. |++||+|||+|........
T Consensus       441 ~Gd~-DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTT  514 (677)
T KOG0596|consen  441 CGDI-DLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTT  514 (677)
T ss_pred             cccc-cHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEEe-eeEEeeeechhcccCcccc
Confidence            8654 9999997766555556 67788899999999999   599999999999999854 6999999999998776666


Q ss_pred             cccccccccCCcccCccccccc-----------CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhc
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQ-----------QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR  738 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~-----------~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~  738 (851)
                      .-.....+||+.||+||.+...           +.+.++||||+|||||+|+.|+.||.....       .|       .
T Consensus       515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-------~~-------a  580 (677)
T KOG0596|consen  515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-------QI-------A  580 (677)
T ss_pred             ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-------HH-------H
Confidence            6666778999999999998633           256799999999999999999999864311       11       2


Q ss_pred             ccccccCccCCCCCChhH-HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          739 SLKSIIDPHLKGNYSPES-LEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       739 ~~~~i~d~~l~~~~~~~~-~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .+..|.||.-.-+|+.-- ...+.++++.||+.||++|||..|+|+|
T Consensus       581 Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  581 KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence            345666764433333211 1238999999999999999999999999

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=1e-34  Score=313.34  Aligned_cols=265  Identities=23%  Similarity=0.360  Sum_probs=200.5

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ++|+..++||+|+||.||+|..+ .++.+|+|+.....  ....+.+.+|++++++++||||+++++++..++..++|+|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            46788899999999999999975 47889999876432  2234678899999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++++|.++....  ..+++.++..++.|++.||.|||+   .+++||||+|+||++++++.+||+|||++....... 
T Consensus        81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~-  154 (286)
T cd07846          81 FVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-  154 (286)
T ss_pred             cCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-
Confidence            99999998876433  348999999999999999999995   899999999999999999999999999987643322 


Q ss_pred             cccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhc-HHHHHH-------HHhhhcc-
Q 047215          670 THVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN-LADWAM-------KWQKQRS-  739 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~-l~~~~~-------~~~~~~~-  739 (851)
                       .......++..|+|||++.+ ..++.++||||||+++|||++|+.|+......+... ...+..       ....... 
T Consensus       155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (286)
T cd07846         155 -EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL  233 (286)
T ss_pred             -cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchH
Confidence             12233457889999999875 457889999999999999999998886443221110 000000       0000000 


Q ss_pred             cccccCccCCC-----CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          740 LKSIIDPHLKG-----NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       740 ~~~i~d~~l~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ......+....     ...+..+..+.+++.+||+.+|.+||++.++++|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence            00000010000     0112446779999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=1.9e-34  Score=305.90  Aligned_cols=246  Identities=28%  Similarity=0.428  Sum_probs=197.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecC
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      ++|...+.||+|+||.||+|.. .+..+++|......  ....+.+|+.++++++|||++++++++..+ ..++||||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~   81 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS   81 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence            4577788999999999999975 45678999876432  245788999999999999999999998764 4799999999


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccc
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~  672 (851)
                      +++|.+++.......+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.....     
T Consensus        82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-----  153 (254)
T cd05083          82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG-----  153 (254)
T ss_pred             CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceecccc-----
Confidence            9999999976655568899999999999999999994   89999999999999999999999999998753221     


Q ss_pred             ccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      ......+..|+|||++.+..++.++||||||+++|||++ |+.|+......+      ..... ..+         ....
T Consensus       154 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~------~~~~~-~~~---------~~~~  217 (254)
T cd05083         154 VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE------VKECV-EKG---------YRME  217 (254)
T ss_pred             CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH------HHHHH-hCC---------CCCC
Confidence            112234568999999998899999999999999999998 888876543221      11111 111         1111


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      .+...+..+.+++.+||+.+|.+||+++++++.|+
T Consensus       218 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  252 (254)
T cd05083         218 PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE  252 (254)
T ss_pred             CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence            22345567899999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=5.8e-34  Score=309.71  Aligned_cols=269  Identities=22%  Similarity=0.310  Sum_probs=204.0

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChh-----hHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQ-----GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~-----~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      +|+..+.||+|+||.||+|... +++.+++|++......     ....+..|++++++++|+||+++++++...+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            4677889999999999999864 5788999988754322     345577899999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+ +|+|.+++.... ..+++.++.+++.|+++||.|||+   .+++|+||||+||+++.++.+||+|||+++.....
T Consensus        81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~  155 (298)
T cd07841          81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSFGSP  155 (298)
T ss_pred             Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence            9999 899999986543 368999999999999999999995   89999999999999999999999999999764332


Q ss_pred             CccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHH--------hhhc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW--------QKQR  738 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~--------~~~~  738 (851)
                      ..  ......++..|+|||.+.+ ..++.++|||||||+++||++|.+++....+.+..  .......        ....
T Consensus       156 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  231 (298)
T cd07841         156 NR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQL--GKIFEALGTPTEENWPGVT  231 (298)
T ss_pred             Cc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHH--HHHHHHcCCCchhhhhhcc
Confidence            11  1223346788999998864 46789999999999999999997776644332211  1100000        0000


Q ss_pred             ccccccCccCCCC-----CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCC
Q 047215          739 SLKSIIDPHLKGN-----YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDD  800 (851)
Q Consensus       739 ~~~~i~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~  800 (851)
                      .............     .....+..+.+++.+||+.+|++|||+.|+++|         +|++...
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~---------~~~~~~~  289 (298)
T cd07841         232 SLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH---------PYFSNDP  289 (298)
T ss_pred             cccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC---------ccccCCC
Confidence            0000000000001     112345678999999999999999999999999         8887543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=3.4e-34  Score=303.77  Aligned_cols=250  Identities=28%  Similarity=0.485  Sum_probs=199.9

Q ss_pred             ceeeeeeeecceEEEEEEEcC-----cceeEEeecCCCChh-hHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          516 DESLMIGVGGFGKVFKGEIED-----CTLAAIKRANPQSEQ-GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       516 ~~~~~LG~G~fG~Vykg~~~~-----~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      +..+.||.|+||.||++...+     +..+++|.+...... ....+..|+.++++++||||+++++++...+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            456789999999999998754     367899998765433 56789999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++++|.+++.......+++.++..++.|++.||+|||+   .+++||||||+||+++.++.++|+|||+++.......
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~  158 (258)
T smart00219       82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY  158 (258)
T ss_pred             ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence            9999999999866543338999999999999999999994   8999999999999999999999999999876443322


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                      .. .....++..|+|||.+....++.++||||+|++++||++ |+.|+.....   ..+.+.   ... ..         
T Consensus       159 ~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~---~~~~~~---~~~-~~---------  221 (258)
T smart00219      159 YK-KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN---EEVLEY---LKK-GY---------  221 (258)
T ss_pred             cc-cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHH---Hhc-CC---------
Confidence            11 112337789999999988889999999999999999998 6666654221   111111   111 10         


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                      ....+...+..+.+++.+||..+|++|||+.|+++.|
T Consensus       222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      222 RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            1112233566799999999999999999999998763

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=1.7e-34  Score=312.25  Aligned_cols=254  Identities=25%  Similarity=0.306  Sum_probs=196.5

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC-hhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-EQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +|...++||+|+||.||++... .+..+|+|.+.... ......+.+|+.++.++. ||||+++++++..++..+++|||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            4445668999999999999864 56889999876542 344567889999999996 99999999999999999999999


Q ss_pred             cCCcchhh---hccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          591 MANGTLRS---HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       591 ~~~gsL~~---~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      ++. +|.+   .+.......+++..+.+++.+++.||+|||+  +.+++||||||+||+++.++.+||+|||+++.....
T Consensus        85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  161 (288)
T cd06616          85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS  161 (288)
T ss_pred             ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence            864 4433   3333334578999999999999999999996  468999999999999999999999999998753221


Q ss_pred             CccccccccccCCcccCccccccc---CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQ---QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~---~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      .   ......|+..|+|||.+.+.   .++.++|||||||++|||++|+.||.....     ..+.....      ....
T Consensus       162 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~------~~~~  227 (288)
T cd06616         162 I---AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-----VFDQLTQV------VKGD  227 (288)
T ss_pred             C---ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-----HHHHHhhh------cCCC
Confidence            1   11233578899999999765   689999999999999999999999864321     11111110      0011


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .+.+........+..+.+|+.+||+.+|.+|||+++++.|
T Consensus       228 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         228 PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1223223334466779999999999999999999999999

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-34  Score=310.56  Aligned_cols=266  Identities=23%  Similarity=0.328  Sum_probs=202.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ++|+..+.||+|+||.||+|... +++.+++|++...  .......+.+|++++++++|+||+++++++..++..++|||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            46888999999999999999875 4678999987653  23345678999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |++++.+..++..  ...+++.++..++.|++.||.|||+   .+++||||+|+||++++++.+||+|||++........
T Consensus        81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~  155 (288)
T cd07833          81 YVERTLLELLEAS--PGGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA  155 (288)
T ss_pred             cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence            9998877766533  2458899999999999999999995   8999999999999999999999999999876443221


Q ss_pred             cccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHH---------HHhhhcc
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM---------KWQKQRS  739 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~---------~~~~~~~  739 (851)
                       .......++..|+|||++.+. .++.++||||||+++|+|++|+.|+......+.........         .+.....
T Consensus       156 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (288)
T cd07833         156 -SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPR  234 (288)
T ss_pred             -ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcc
Confidence             122335678899999999887 88999999999999999999998886543221110000000         0000000


Q ss_pred             cc-----cccCcc-CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          740 LK-----SIIDPH-LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       740 ~~-----~i~d~~-l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..     .+.++. ....++..++..+.+++++||+.+|++|||++++++|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  285 (288)
T cd07833         235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH  285 (288)
T ss_pred             ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence            00     000000 0001223346789999999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=3e-34  Score=310.85  Aligned_cols=265  Identities=22%  Similarity=0.344  Sum_probs=196.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh-hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE-QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++|+..+.||+|++|.||+|... +++.+++|.+..... .....+.+|++++++++||||+++++++..++..++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            57888999999999999999865 568899998765422 2234567899999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++ +|.+++.... ..+++.++..++.|+++||.|||+   .+++||||||+||+++.++.+||+|||+++....... 
T Consensus        85 ~~~-~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-  158 (291)
T cd07844          85 LDT-DLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK-  158 (291)
T ss_pred             CCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCCCc-
Confidence            985 8988886543 368899999999999999999995   8999999999999999999999999999875322111 


Q ss_pred             ccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCC-cchhcHHHHHHHHhhhcccccc-----
Q 047215          671 HVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLP-KDQINLADWAMKWQKQRSLKSI-----  743 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~-~~~~~l~~~~~~~~~~~~~~~i-----  743 (851)
                       ......++..|+|||++.+ ..++.++||||||+++|||++|+.||..... .++..................+     
T Consensus       159 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (291)
T cd07844         159 -TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE  237 (291)
T ss_pred             -cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence             1122346789999999875 5689999999999999999999999865431 1111100000000000000000     


Q ss_pred             --------c-CccCCCCCC-hhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          744 --------I-DPHLKGNYS-PESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       744 --------~-d~~l~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                              . ...+....+ ......+.+++.+||+.+|++|||+.|+++|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~  288 (291)
T cd07844         238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH  288 (291)
T ss_pred             cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence                    0 000000000 0112567899999999999999999999988

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=3.8e-34  Score=306.79  Aligned_cols=255  Identities=27%  Similarity=0.428  Sum_probs=197.2

Q ss_pred             CceeeeeeeecceEEEEEEEc----CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC------
Q 047215          515 FDESLMIGVGGFGKVFKGEIE----DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN------  582 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~----~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~------  582 (851)
                      |...+.||+|+||.||+|...    .+..+|||++...  .....+++.+|++++++++||||+++++++....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            455678999999999999864    2567899987654  3445677899999999999999999999885432      


Q ss_pred             cEEEEEEecCCcchhhhccCC----CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeec
Q 047215          583 EMILVYEYMANGTLRSHLFGS----DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF  658 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~----~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DF  658 (851)
                      ..++++||+++|+|.+++...    ....+++..+.+++.|++.||+|||+   .+|+||||||+||+++.++.+||+||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcc
Confidence            247899999999998887432    22357889999999999999999995   89999999999999999999999999


Q ss_pred             cccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhh
Q 047215          659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQ  737 (851)
Q Consensus       659 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~  737 (851)
                      |+++...............++..|++||.+....++.++||||||+++|||++ |+.|+......   .+..+..   ..
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~---~~~~~~~---~~  231 (273)
T cd05074         158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS---EIYNYLI---KG  231 (273)
T ss_pred             cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH---HHHHHHH---cC
Confidence            99886432221112223345678999999998899999999999999999999 77777543221   1111111   00


Q ss_pred             cccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          738 RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       738 ~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      .        .+  ..+...+..+.+++.+||+.+|++||++.++++.|+.+
T Consensus       232 ~--------~~--~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         232 N--------RL--KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             C--------cC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            0        00  11234556799999999999999999999999998854

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=4e-34  Score=341.63  Aligned_cols=255  Identities=21%  Similarity=0.344  Sum_probs=197.9

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEc--cCCcEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCD--EQNEMI  585 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~--~~~~~~  585 (851)
                      ..++|.+.++||+|+||.||+++.. .+..+++|.+...  .......|..|+.+|++|+|||||++++++.  ....++
T Consensus        11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly   90 (1021)
T PTZ00266         11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY   90 (1021)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence            3468999999999999999999865 4567788877643  3344567899999999999999999999874  345789


Q ss_pred             EEEEecCCcchhhhccCC--CCCCCchhhhHHHHHHHHHHHHHhhcCC----CCCeEEcCCCCCCeEEcC----------
Q 047215          586 LVYEYMANGTLRSHLFGS--DLPPLTWKQRLDACIGAARGLHYLHTGA----ERGIIHRDVKTTNILLDE----------  649 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLHs~~----~~~iiHrDlk~~NILld~----------  649 (851)
                      |||||+++|+|.++|...  ....+++..++.|+.||+.||.|||+..    ..+||||||||+||||+.          
T Consensus        91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~  170 (1021)
T PTZ00266         91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA  170 (1021)
T ss_pred             EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence            999999999999998542  2346899999999999999999999622    146999999999999964          


Q ss_pred             -------CCeEEEeeccccccCCCCCccccccccccCCcccCcccccc--cCCCchHHHHHHHHHHHHHHhCCcCCCCCC
Q 047215          650 -------NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR--QQLTEKSDVYSFGVVLFEVVCARAVINPTL  720 (851)
Q Consensus       650 -------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~t~ksDVwS~GvvL~eLltG~~p~~~~~  720 (851)
                             ...+||+|||+++.....   .......||+.|+|||++.+  ..++.++|||||||+||||++|+.||....
T Consensus       171 ~~~n~ng~~iVKLsDFGlAr~l~~~---s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~  247 (1021)
T PTZ00266        171 QANNLNGRPIAKIGDFGLSKNIGIE---SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN  247 (1021)
T ss_pred             cccccCCCCceEEccCCcccccccc---ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence                   335899999999764321   12234568999999999864  458999999999999999999999986533


Q ss_pred             CcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       721 ~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ...     .........        +.+.   ....+..+.+|+..||+.+|.+||++.|+|.|
T Consensus       248 ~~~-----qli~~lk~~--------p~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h  295 (1021)
T PTZ00266        248 NFS-----QLISELKRG--------PDLP---IKGKSKELNILIKNLLNLSAKERPSALQCLGY  295 (1021)
T ss_pred             cHH-----HHHHHHhcC--------CCCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence            211     111111100        1111   11234568999999999999999999999987

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=4.4e-34  Score=308.32  Aligned_cols=262  Identities=23%  Similarity=0.305  Sum_probs=201.9

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +|+..+.||+|+||.||+|... ++..+++|++....  ......+.+|+.++++++||||+++++++..+...++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            4777889999999999999864 67889999876543  33456789999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      + +++|.+++.... .++++.++..++.|+++||.|||+   .+++|+||||+||+++.++.++|+|||++........ 
T Consensus        81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-  154 (286)
T cd07832          81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-  154 (286)
T ss_pred             c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-
Confidence            9 999999986544 568999999999999999999995   8999999999999999999999999999876433221 


Q ss_pred             ccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh---------c--
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ---------R--  738 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~---------~--  738 (851)
                      .......|+..|+|||++.+. .++.++||||+|++++||++|++++....+...   ..+.......         .  
T Consensus       155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  231 (286)
T cd07832         155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ---LAIVFRTLGTPNEETWPGLTSL  231 (286)
T ss_pred             CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHH---HHHHHHHcCCCChHHHhhccCc
Confidence            122335688999999998654 468999999999999999999777654332211   1111110000         0  


Q ss_pred             -ccccccCccCC----CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          739 -SLKSIIDPHLK----GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       739 -~~~~i~d~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       ....+..+...    ....++....+.+++.+||+.+|.+|||+++++.|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         232 PDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             chhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence             00000000000    01112345789999999999999999999999999

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=2.5e-34  Score=310.22  Aligned_cols=262  Identities=22%  Similarity=0.334  Sum_probs=196.4

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +|+..+.||+|+||.||+|+.. .+..+++|++....  ......+.+|++++++++||||+++++++...+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            4777889999999999999874 57788999876432  22335678899999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++ +|.+++.... ..+++..+..++.|+++||.|||+   .+++||||||+||+++.++.+||+|||+++......  
T Consensus        81 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~--  153 (284)
T cd07839          81 CDQ-DLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV--  153 (284)
T ss_pred             CCC-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC--
Confidence            974 7777765432 458999999999999999999995   899999999999999999999999999987532211  


Q ss_pred             ccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhc------ccccc
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR------SLKSI  743 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~------~~~~i  743 (851)
                      .......++..|+|||++.+. .++.++|||||||++|||++|+.|+........ .+ +.........      .....
T Consensus       154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~  231 (284)
T cd07839         154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QL-KRIFRLLGTPTEESWPGVSKL  231 (284)
T ss_pred             CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHH-HH-HHHHHHhCCCChHHhHHhhhc
Confidence            112234578899999998764 479999999999999999999988654322111 00 0000000000      00000


Q ss_pred             cC----ccCCC-----CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          744 ID----PHLKG-----NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       744 ~d----~~l~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .+    +....     ...+..+..+.+++.+||+.||.+|||+++++.|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h  281 (284)
T cd07839         232 PDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH  281 (284)
T ss_pred             ccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence            00    00000     1112345678999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=4.5e-34  Score=305.22  Aligned_cols=254  Identities=24%  Similarity=0.410  Sum_probs=202.3

Q ss_pred             CCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCC------hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQS------EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~------~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      +|+..+.||+|++|.||+|.. .++..+++|.+....      ....+.+.+|++++++++||||+++++++...+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            466778899999999999985 567788999876432      1235678999999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC-eEEEeeccccccCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF-VAKMSDFGLSKTGP  665 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~-~~kl~DFGla~~~~  665 (851)
                      |+||+++++|.+++...  .++++..+..++.|++.||.|||+   .+++|+||||+||+++.++ .+||+|||++....
T Consensus        81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~  155 (268)
T cd06630          81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARLA  155 (268)
T ss_pred             EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence            99999999999998543  468899999999999999999995   8999999999999998765 69999999987643


Q ss_pred             CCCc--cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          666 SMEH--THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       666 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      ....  ........++..|+|||.+.+..++.++||||+|+++++|++|+.|+.........   .....         +
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~---~~~~~---------~  223 (268)
T cd06630         156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL---ALIFK---------I  223 (268)
T ss_pred             cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH---HHHHH---------H
Confidence            3211  11122346888999999998889999999999999999999999988643322111   11110         0


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .........+......+.+++.+||+.+|.+||++.++++|
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~  264 (268)
T cd06630         224 ASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH  264 (268)
T ss_pred             hccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence            00111123344556779999999999999999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=4.2e-34  Score=308.13  Aligned_cols=258  Identities=23%  Similarity=0.329  Sum_probs=197.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC-hhhHHHHHHHHHH-HHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-EQGLAEFETEIEM-LSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~-l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ++|+..+.||+|+||.||+++.. ++..+|+|++.... ......+..|+.. ++.++||||+++++++..++..+++||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            47888999999999999999875 57889999876542 2333455566665 566789999999999999999999999


Q ss_pred             ecCCcchhhhccCC--CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          590 YMANGTLRSHLFGS--DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       590 y~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |++ |+|.+++...  ....+++..+..++.|++.||+|||+  ..+++||||||+||+++.++.+||+|||+++.....
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~  157 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS--KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS  157 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh--cCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence            997 6787776432  23568999999999999999999995  338999999999999999999999999998753221


Q ss_pred             CccccccccccCCcccCcccccc----cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWR----QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~----~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                         .......++..|+|||.+.+    ..++.++|+|||||++|||++|+.|+....... ..+.    ... ..     
T Consensus       158 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~----~~~-~~-----  223 (283)
T cd06617         158 ---VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF-QQLK----QVV-EE-----  223 (283)
T ss_pred             ---cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH-HHHH----HHH-hc-----
Confidence               11223457889999998864    457899999999999999999999986432110 0010    000 00     


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      ..+.+.   ....+..+.+++.+||+.+|.+||++.++++|         +|+...
T Consensus       224 ~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~---------~~~~~~  267 (283)
T cd06617         224 PSPQLP---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQH---------PFFELH  267 (283)
T ss_pred             CCCCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhcC---------chhhhc
Confidence            111111   11245668999999999999999999999999         777653

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.4e-34  Score=305.84  Aligned_cols=254  Identities=23%  Similarity=0.413  Sum_probs=203.6

Q ss_pred             CCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC-ChhhHHHHHHHHHHHHhcC---CcceeeEEEEEccCCcEEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLR---HRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      .|+..+.||+|+||.||+|.. .++..+++|.+... ......++.+|+.++++++   |||++++++++..+...++||
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            466677899999999999986 46788999987654 3445677889999999997   999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++++|.+++...   .+++..+..++.|++.||.|||+   .+++||||+|+||+++.++.++|+|||++.......
T Consensus        82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~  155 (277)
T cd06917          82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS  155 (277)
T ss_pred             ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence            999999999988543   68899999999999999999994   899999999999999999999999999987643322


Q ss_pred             ccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                        .......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.|+........      ...      ......+.
T Consensus       156 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~------~~~------~~~~~~~~  221 (277)
T cd06917         156 --SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA------MML------IPKSKPPR  221 (277)
T ss_pred             --cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh------hhc------cccCCCCC
Confidence              11233468899999999865 4578999999999999999999999865432111      100      01111111


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      +..   ...+..+.+++.+||+.||.+||++.+++.|         +|++..
T Consensus       222 ~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~---------~~~~~~  261 (277)
T cd06917         222 LED---NGYSKLLREFVAACLDEEPKERLSAEELLKS---------KWIKAH  261 (277)
T ss_pred             CCc---ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC---------hHhhcc
Confidence            111   1245678999999999999999999999998         787643

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=5.8e-34  Score=309.34  Aligned_cols=250  Identities=23%  Similarity=0.341  Sum_probs=203.8

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      ++|...+.||+|+||.||+|.. .++..+++|.+........+.+.+|+.++++++||||+++++++..++..++|+||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            6788889999999999999985 456789999886655555677899999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++++|.+++...   .+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++........  
T Consensus        99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~--  170 (293)
T cd06647          99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--  170 (293)
T ss_pred             CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc--
Confidence            999999998543   47889999999999999999994   8999999999999999999999999999865433221  


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      ......|++.|+|||.+....++.++||||||+++||+++|+.||....+......      ..        ..+.....
T Consensus       171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~------~~--------~~~~~~~~  236 (293)
T cd06647         171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------IA--------TNGTPELQ  236 (293)
T ss_pred             ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee------hh--------cCCCCCCC
Confidence            12334688899999999888899999999999999999999999875433221100      00        00000011


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .+...+..+.+++.+||+.+|.+||++.+++.|
T Consensus       237 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         237 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            123345678999999999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=1.4e-34  Score=314.10  Aligned_cols=251  Identities=22%  Similarity=0.360  Sum_probs=202.7

Q ss_pred             eeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcch
Q 047215          518 SLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL  596 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL  596 (851)
                      ...||+|+||.||++... ++..++||++........+.+.+|+.++++++||||+++++.+..++..++||||+++++|
T Consensus        27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L  106 (292)
T cd06658          27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL  106 (292)
T ss_pred             hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence            346999999999999864 5678999988766656667799999999999999999999999999999999999999999


Q ss_pred             hhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccccccc
Q 047215          597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV  676 (851)
Q Consensus       597 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~  676 (851)
                      .+++..   ..+++.++..++.|++.||.|||+   .+++||||||+||++++++.+||+|||++.......  ......
T Consensus       107 ~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~~~  178 (292)
T cd06658         107 TDIVTH---TRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--PKRKSL  178 (292)
T ss_pred             HHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc--ccCcee
Confidence            998843   347899999999999999999995   899999999999999999999999999987533211  112335


Q ss_pred             ccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhH
Q 047215          677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPES  756 (851)
Q Consensus       677 ~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  756 (851)
                      .|+..|+|||.+.+..++.++||||||+++|||++|+.|+....+....      ...      .....+.+..  ....
T Consensus       179 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~------~~~------~~~~~~~~~~--~~~~  244 (292)
T cd06658         179 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM------RRI------RDNLPPRVKD--SHKV  244 (292)
T ss_pred             ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH------HHH------HhcCCCcccc--cccc
Confidence            6889999999998889999999999999999999999998754322111      000      0111111111  1233


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          757 LEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       757 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      +..+.+++.+||+.||.+|||++++++|         +|+...
T Consensus       245 ~~~~~~li~~~l~~~P~~Rpt~~~il~~---------~~~~~~  278 (292)
T cd06658         245 SSVLRGFLDLMLVREPSQRATAQELLQH---------PFLKLA  278 (292)
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhhC---------hhhhcc
Confidence            4568899999999999999999999999         777643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=1.6e-33  Score=305.17  Aligned_cols=267  Identities=20%  Similarity=0.257  Sum_probs=197.0

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh-hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE-QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++++|...+.||+|+||.||+|... ++..+++|++..... .....+.+|+.++++++|+||+++.+++..++..++|+
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            3578999999999999999999864 577899998765432 22346788999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+. ++|.+.+.... ..+.+.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++......
T Consensus        83 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~  157 (291)
T cd07870          83 EYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS  157 (291)
T ss_pred             eccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence            9996 57766654332 457788899999999999999995   899999999999999999999999999987532211


Q ss_pred             ccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHH----------HHhhh
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM----------KWQKQ  737 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~----------~~~~~  737 (851)
                      .  ......+++.|+|||++.+ ..++.++|||||||++|||++|+.||.........-...|..          .....
T Consensus       158 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (291)
T cd07870         158 Q--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKL  235 (291)
T ss_pred             C--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhc
Confidence            1  1223357889999999875 458899999999999999999999987543221100000000          00000


Q ss_pred             -cccccccCccCCCCC-----ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          738 -RSLKSIIDPHLKGNY-----SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       738 -~~~~~i~d~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       ...............     ....+..+.+++.+|++.||++|||+.|++.|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h  288 (291)
T cd07870         236 PNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH  288 (291)
T ss_pred             ccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence             000000000000000     00124568899999999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=100.00  E-value=4e-34  Score=297.03  Aligned_cols=266  Identities=21%  Similarity=0.302  Sum_probs=219.7

Q ss_pred             CHHHHHHHhcCCceeeeeeeecceEEEEEEE------cCcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEE
Q 047215          504 TLAEIRVATNNFDESLMIGVGGFGKVFKGEI------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIG  576 (851)
Q Consensus       504 ~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~------~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g  576 (851)
                      ..+++.....++....++-+|.||.||+|.+      .+.+.+.+|.++.. +.-+...+..|-.++..+.|||+.+..+
T Consensus       275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~  354 (563)
T KOG1024|consen  275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG  354 (563)
T ss_pred             hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence            3556667777888888999999999999954      44566778876654 6667788999999999999999999999


Q ss_pred             EEcc-CCcEEEEEEecCCcchhhhccC------CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC
Q 047215          577 FCDE-QNEMILVYEYMANGTLRSHLFG------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE  649 (851)
Q Consensus       577 ~~~~-~~~~~lV~Ey~~~gsL~~~L~~------~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~  649 (851)
                      ++.+ ....+.+|.++.-|+|..+|..      +....++-.+...++.|++.||+|||   ++++||.||.++|+++|+
T Consensus       355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd  431 (563)
T KOG1024|consen  355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDD  431 (563)
T ss_pred             EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehh
Confidence            9854 4567889999999999999962      22345778899999999999999999   599999999999999999


Q ss_pred             CCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHH
Q 047215          650 NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLA  728 (851)
Q Consensus       650 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~  728 (851)
                      ..++||+|=.|+|...+.+..........+..||+||.+....|+.++|||||||+||||+| |+.|+-..+|++.... 
T Consensus       432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~y-  510 (563)
T KOG1024|consen  432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHY-  510 (563)
T ss_pred             heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHH-
Confidence            99999999999998777666665555667889999999999999999999999999999998 6777766666543211 


Q ss_pred             HHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          729 DWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       729 ~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                            ..+         ..+-..|-.|++++..++.-||+..|++||+++|++.-|.+.
T Consensus       511 ------lkd---------GyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF  555 (563)
T KOG1024|consen  511 ------LKD---------GYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF  555 (563)
T ss_pred             ------Hhc---------cceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence                  111         122234567889999999999999999999999999988754

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=1.1e-33  Score=299.15  Aligned_cols=252  Identities=28%  Similarity=0.413  Sum_probs=207.0

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccC--CcEEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ--NEMILVY  588 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--~~~~lV~  588 (851)
                      +|+..+.||+|++|.||+|... +++.+++|+.....  ....+.+.+|+.++++++||||+++++.+...  ...++++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            4677889999999999999876 67889999876554  35567899999999999999999999999888  8999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++++|.+++....  .+++.++..++.|++++|.|||+   .+++|+||+|+||+++.++.+||+|||.+.......
T Consensus        81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~  155 (260)
T cd06606          81 EYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE  155 (260)
T ss_pred             EecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence            9999999999986543  78999999999999999999995   899999999999999999999999999987644332


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                      .........++..|++||.+.....+.++||||||+++++|++|+.|+......     ......         +.....
T Consensus       156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~---------~~~~~~  221 (260)
T cd06606         156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP-----MAALYK---------IGSSGE  221 (260)
T ss_pred             ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-----HHHHHh---------ccccCC
Confidence            211123456888999999998888999999999999999999999998765411     110111         111111


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ....+...+..+.+++.+|++.+|.+||++.+++.|
T Consensus       222 ~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         222 PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence            223344456789999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6e-35  Score=322.63  Aligned_cols=241  Identities=23%  Similarity=0.302  Sum_probs=188.6

Q ss_pred             eeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhc---CCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          521 IGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKL---RHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       521 LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l---~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      ||+|+||+||+|+.. .+..+|+|++....   ......+..|..++.++   +||||+++++++..++..++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            699999999999865 57889999876431   22234455677777665   699999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |+|.+++...  ..+++.++..++.|+++||+|||+   ++|+||||||+|||++.++.+||+|||+++......  ...
T Consensus        81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--~~~  153 (330)
T cd05586          81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN--KTT  153 (330)
T ss_pred             ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--CCc
Confidence            9999988543  468899999999999999999995   899999999999999999999999999987532211  223


Q ss_pred             cccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY  752 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~  752 (851)
                      ....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+      ..... ..+.      ..+.   
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~------~~~~i-~~~~------~~~~---  217 (330)
T cd05586         154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ------MYRNI-AFGK------VRFP---  217 (330)
T ss_pred             cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH------HHHHH-HcCC------CCCC---
Confidence            346799999999998754 58999999999999999999999986543211      11111 0010      1111   


Q ss_pred             ChhHHHHHHHHHHHhcccCCCCCC----CHHHHHHH
Q 047215          753 SPESLEKFGEIAEKCLDDEGKNRP----TMGEVLWH  784 (851)
Q Consensus       753 ~~~~~~~l~~l~~~Cl~~dP~~RP----t~~evl~~  784 (851)
                      ....+..+.+++.+||+.||.+||    ++.++++|
T Consensus       218 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h  253 (330)
T cd05586         218 KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH  253 (330)
T ss_pred             CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence            012345688999999999999998    68888888

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1.7e-33  Score=307.33  Aligned_cols=253  Identities=23%  Similarity=0.311  Sum_probs=198.9

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||++... .+..+++|.+....   ......+.+|+++++.++||||+++++.+..++..++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            46888999999999999999875 45678999876543   234567889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++++|.+++...  ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++......
T Consensus        81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~  155 (305)
T cd05609          81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL  155 (305)
T ss_pred             ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence            999999999999554  468899999999999999999995   899999999999999999999999999987421100


Q ss_pred             c-------------cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHh
Q 047215          669 H-------------THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ  735 (851)
Q Consensus       669 ~-------------~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~  735 (851)
                      .             ........++..|+|||.+....++.++|+|||||++|||++|+.||....+.      ++.....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~------~~~~~~~  229 (305)
T cd05609         156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE------ELFGQVI  229 (305)
T ss_pred             cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHH
Confidence            0             00112245788999999998889999999999999999999999998654321      1111111


Q ss_pred             hhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 047215          736 KQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT---MGEVLWH  784 (851)
Q Consensus       736 ~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt---~~evl~~  784 (851)
                      . +   .+..+..    ....+..+.+++.+||+.+|++||+   +.++++|
T Consensus       230 ~-~---~~~~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         230 S-D---DIEWPEG----DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             h-c---ccCCCCc----cccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            0 0   1111111    1134566899999999999999998   5666666

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.5e-34  Score=306.68  Aligned_cols=254  Identities=28%  Similarity=0.383  Sum_probs=201.1

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCC------
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQN------  582 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~------  582 (851)
                      ++++|+..+.||+|++|.||+|... ++..+++|.+..... ....+.+|+.+++++ +||||+++++++....      
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            5688999999999999999999975 467788998765543 346789999999999 7999999999996544      


Q ss_pred             cEEEEEEecCCcchhhhccCCC--CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSD--LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL  660 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~--~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGl  660 (851)
                      ..++||||+++++|.+++....  ...+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||+
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~~~  159 (275)
T cd06608          83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFGV  159 (275)
T ss_pred             EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCCcc
Confidence            4899999999999999885433  4578999999999999999999995   8999999999999999999999999999


Q ss_pred             cccCCCCCccccccccccCCcccCcccccc-----cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHh
Q 047215          661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWR-----QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ  735 (851)
Q Consensus       661 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~  735 (851)
                      +......  ........|+..|+|||.+..     ..++.++|||||||+|+||++|+.||....+...  +.    ...
T Consensus       160 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~----~~~  231 (275)
T cd06608         160 SAQLDST--LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA--LF----KIP  231 (275)
T ss_pred             ceecccc--hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH--HH----Hhh
Confidence            8753321  122234568899999998753     3578899999999999999999999864322111  10    000


Q ss_pred             hhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          736 KQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       736 ~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                            ....+.+  ..+...+..+.+++.+||..||++|||+.++++|
T Consensus       232 ------~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~  272 (275)
T cd06608         232 ------RNPPPTL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLEH  272 (275)
T ss_pred             ------ccCCCCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence                  0001111  1122355678999999999999999999999998

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=7e-34  Score=308.09  Aligned_cols=245  Identities=24%  Similarity=0.359  Sum_probs=202.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|...+.||+|+||.||++... +++.+++|.+...   .......+.+|++++++++||||+++++++..++..++||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            46888899999999999999865 5678899987643   2234567889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++++|.+++...  ..+++..+..++.|++.||.|||+   .+++||||+|+|||++.++.+||+|||+++..... 
T Consensus        81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-  154 (290)
T cd05580          81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-  154 (290)
T ss_pred             ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence            999999999998554  468899999999999999999995   99999999999999999999999999998764332 


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                          .....+++.|+|||.+.+...+.++||||||+++++|++|+.|+.......   ...   .         +...  
T Consensus       155 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~---~---------~~~~--  213 (290)
T cd05580         155 ----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ---IYE---K---------ILEG--  213 (290)
T ss_pred             ----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH---HHH---H---------HhcC--
Confidence                234468899999999988889999999999999999999999986543111   000   0         0100  


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                      ...++...+..+++++.+||+.+|.+||     +++|+++|
T Consensus       214 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~  254 (290)
T cd05580         214 KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH  254 (290)
T ss_pred             CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence            1122334456789999999999999999     88999988

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=7.5e-34  Score=302.19  Aligned_cols=253  Identities=23%  Similarity=0.315  Sum_probs=202.2

Q ss_pred             CCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEc--cCCcEEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCD--EQNEMILVY  588 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~--~~~~~~lV~  588 (851)
                      +|+..+.||.|+||.||++.. .++..+++|.+...  .....+.+..|++++++++||||+++++++.  .+...+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            467788999999999999985 45678888987643  3444567889999999999999999999874  345689999


Q ss_pred             EecCCcchhhhccCC--CCCCCchhhhHHHHHHHHHHHHHhhcCC--CCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          589 EYMANGTLRSHLFGS--DLPPLTWKQRLDACIGAARGLHYLHTGA--ERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLHs~~--~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ||+++++|.+++...  ...++++.+++.++.|++.||.|||..+  ..+++|+||||+||+++.++.+||+|||++...
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            999999999998542  2356899999999999999999999432  488999999999999999999999999998864


Q ss_pred             CCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          665 PSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       665 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      .....  ......++..|+|||.+....++.++|+||||+++++|++|+.|+......   .+.+   .. ..+      
T Consensus       161 ~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~---~~-~~~------  225 (265)
T cd08217         161 GHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL---QLAS---KI-KEG------  225 (265)
T ss_pred             cCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH---HHHH---HH-hcC------
Confidence            33221  123346899999999999888999999999999999999999998754311   1111   11 111      


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                         .....+...+..+.+++.+||+.+|.+||++.++++|
T Consensus       226 ---~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         226 ---KFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             ---CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence               1112334455678999999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=8.9e-34  Score=302.04  Aligned_cols=253  Identities=27%  Similarity=0.393  Sum_probs=202.2

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh--hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE--QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +|+..+.||+|+||.||+|... ++..+++|.+.....  ...+.+.+|+.++++++|+||+++++++...+..++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            4677889999999999999864 678889998765533  3678899999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++...  ..+++..+..++.++++||.|||+   .+++|+||+|+||++++++.+||+|||++.........
T Consensus        81 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~  155 (264)
T cd06626          81 CSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT  155 (264)
T ss_pred             CCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence            9999999998654  357889999999999999999995   89999999999999999999999999998764332221


Q ss_pred             cc--ccccccCCcccCcccccccC---CCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          671 HV--STAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       671 ~~--~~~~~gt~~y~aPE~~~~~~---~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ..  .....++..|+|||++.+..   ++.++||||||++++|+++|+.||.......       ........    ...
T Consensus       156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-------~~~~~~~~----~~~  224 (264)
T cd06626         156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-------QIMFHVGA----GHK  224 (264)
T ss_pred             ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-------HHHHHHhc----CCC
Confidence            11  12356788999999998766   8999999999999999999999986543211       11111000    011


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +.+.  ....+...+.+++.+||+.+|.+|||+.+++.|
T Consensus       225 ~~~~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~  261 (264)
T cd06626         225 PPIP--DSLQLSPEGKDFLDRCLESDPKKRPTASELLQH  261 (264)
T ss_pred             CCCC--cccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            1111  112235668899999999999999999999988

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=1.6e-33  Score=303.18  Aligned_cols=247  Identities=26%  Similarity=0.377  Sum_probs=200.8

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      -|+..+.||+|+||.||+|... ++..+|+|..... .......+.+|++.+++++||||+++++++..++..++||||+
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            3556778999999999999864 5678999987643 2344567899999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++++|.+++..   ..+++.++..++.|++.+|.|||+   .+++|+||||+||+++.++.++|+|||++.......  .
T Consensus        85 ~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~--~  156 (277)
T cd06641          85 GGGSALDLLEP---GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--I  156 (277)
T ss_pred             CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccch--h
Confidence            99999998854   358899999999999999999994   999999999999999999999999999987543221  1


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      ......++..|+|||.+.+..++.++|+|||||++|+|++|..|+....+..      +..... ..         ....
T Consensus       157 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~-~~---------~~~~  220 (277)
T cd06641         157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK------VLFLIP-KN---------NPPT  220 (277)
T ss_pred             hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH------HHHHHh-cC---------CCCC
Confidence            1233467889999999988889999999999999999999999886433211      111110 00         0112


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .....+..+.+++.+||+.+|.+||++.++++|
T Consensus       221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         221 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            233455678999999999999999999999999

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6e-35  Score=321.83  Aligned_cols=243  Identities=26%  Similarity=0.392  Sum_probs=191.3

Q ss_pred             eeeeeecceEEEEEEEc-CcceeE---EeecC-CCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC--cEEEEEEec
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAA---IKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN--EMILVYEYM  591 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~va---vK~~~-~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~--~~~lV~Ey~  591 (851)
                      .+||+|+|-+||||... .|..||   ||.-. ..++...+.|..|+.+|+.|+||||++++.++.+..  ...+|+|.|
T Consensus        46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~  125 (632)
T KOG0584|consen   46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF  125 (632)
T ss_pred             hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence            36999999999999764 344444   33221 124556688999999999999999999999986554  478999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc-CCCeEEEeeccccccCCCCCcc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld-~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      ..|+|..++...+  .++.+.+..+|+||++||.|||+ ..++|||||||+.||+|+ .-|.|||+|+|||.....    
T Consensus       126 TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs-~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~----  198 (632)
T KOG0584|consen  126 TSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHS-QDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK----  198 (632)
T ss_pred             cCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhc-CCCCccccccccceEEEcCCcCceeecchhHHHHhhc----
Confidence            9999999995544  57888999999999999999997 567999999999999997 568999999999987432    


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      .....+.|||.|||||+.. ..|.+.+||||||++++||+|+..|+..-....+.  ...+..-.....+.++-|     
T Consensus       199 s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQI--YKKV~SGiKP~sl~kV~d-----  270 (632)
T KOG0584|consen  199 SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQI--YKKVTSGIKPAALSKVKD-----  270 (632)
T ss_pred             cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHH--HHHHHcCCCHHHhhccCC-----
Confidence            1233478999999999986 88999999999999999999999998653322221  111211122222222322     


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                             +.+++||.+||.. .++|||+.|+|+|
T Consensus       271 -------Pevr~fIekCl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  271 -------PEVREFIEKCLAT-KSERLSAKELLKD  296 (632)
T ss_pred             -------HHHHHHHHHHhcC-chhccCHHHHhhC
Confidence                   3578999999999 9999999999999

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=1e-33  Score=301.64  Aligned_cols=243  Identities=23%  Similarity=0.311  Sum_probs=198.7

Q ss_pred             eeeecceEEEEEEEcC-cceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcch
Q 047215          521 IGVGGFGKVFKGEIED-CTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL  596 (851)
Q Consensus       521 LG~G~fG~Vykg~~~~-~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL  596 (851)
                      ||+|++|.||+++... ++.+++|.+....   ....+.+.+|+.++++++||||+++++++..++..++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            6899999999999754 6788999876432   23456799999999999999999999999999999999999999999


Q ss_pred             hhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccccccc
Q 047215          597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV  676 (851)
Q Consensus       597 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~  676 (851)
                      .+++...  ..+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++......   .....
T Consensus        81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~  152 (262)
T cd05572          81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTF  152 (262)
T ss_pred             HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccccc
Confidence            9999654  358899999999999999999995   999999999999999999999999999987643321   12334


Q ss_pred             ccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhH
Q 047215          677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPES  756 (851)
Q Consensus       677 ~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  756 (851)
                      .++..|++||.+....++.++|+||||+++|||++|..|+.......    .+....         +.+......++...
T Consensus       153 ~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~---------~~~~~~~~~~~~~~  219 (262)
T cd05572         153 CGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP----MEIYND---------ILKGNGKLEFPNYI  219 (262)
T ss_pred             cCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH----HHHHHH---------HhccCCCCCCCccc
Confidence            67889999999988889999999999999999999999987654211    111111         11111122334444


Q ss_pred             HHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 047215          757 LEKFGEIAEKCLDDEGKNRPT-----MGEVLWH  784 (851)
Q Consensus       757 ~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  784 (851)
                      +..+.+++.+||+.+|.+||+     ++|+++|
T Consensus       220 ~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~  252 (262)
T cd05572         220 DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH  252 (262)
T ss_pred             CHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence            678999999999999999999     8999998

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=5.8e-34  Score=302.17  Aligned_cols=250  Identities=24%  Similarity=0.397  Sum_probs=202.1

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +|+..+.||+|+||.||+|... ++..+++|.+...  .....+.+.+|+.++++++||||+++++.+..+...++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            4778889999999999999875 4677899987653  223456788999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC-eEEEeeccccccCCCCCc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~-~~kl~DFGla~~~~~~~~  669 (851)
                      +++++|.+++.......+++..+..++.|++.||.|||+   .+++|+||||+||++++++ .+||+|||.+....... 
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-  156 (257)
T cd08225          81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM-  156 (257)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence            999999999866555568999999999999999999995   8999999999999998875 57999999987643211 


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                       .......|++.|+|||++....++.++||||||++++||++|+.|+.....      .++...... ..    .     
T Consensus       157 -~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~-~~----~-----  219 (257)
T cd08225         157 -ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL------HQLVLKICQ-GY----F-----  219 (257)
T ss_pred             -ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHhc-cc----C-----
Confidence             122234588999999999888899999999999999999999998864321      222221111 10    1     


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ....+..+..+.+++.+||+.+|++|||+.++++|
T Consensus       220 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         220 APISPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            11223445679999999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=5e-34  Score=310.51  Aligned_cols=245  Identities=23%  Similarity=0.345  Sum_probs=198.6

Q ss_pred             eeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcch
Q 047215          518 SLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL  596 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL  596 (851)
                      ...||+|+||.||++... ++..+++|.+........+.+.+|+.+++.++||||+++++++..++..++|+||+++++|
T Consensus        26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L  105 (297)
T cd06659          26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL  105 (297)
T ss_pred             hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence            446999999999999864 5788999988665555567788999999999999999999999999999999999999999


Q ss_pred             hhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccccccc
Q 047215          597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV  676 (851)
Q Consensus       597 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~  676 (851)
                      ..++..   ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++.......  ......
T Consensus       106 ~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~~~  177 (297)
T cd06659         106 TDIVSQ---TRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKRKSL  177 (297)
T ss_pred             HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhccccc--ccccce
Confidence            988744   357899999999999999999994   899999999999999999999999999986533211  112345


Q ss_pred             ccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhH
Q 047215          677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPES  756 (851)
Q Consensus       677 ~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  756 (851)
                      .|+..|+|||++.+..++.++|||||||+++||++|+.||....+.+..      ..... .     ..+..  ......
T Consensus       178 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~------~~~~~-~-----~~~~~--~~~~~~  243 (297)
T cd06659         178 VGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM------KRLRD-S-----PPPKL--KNAHKI  243 (297)
T ss_pred             ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH------HHHhc-c-----CCCCc--cccCCC
Confidence            6889999999999889999999999999999999999998754322111      11100 0     00101  112234


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          757 LEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       757 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +..+.+++.+||+.+|.+||+++++++|
T Consensus       244 ~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         244 SPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             CHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            4568899999999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=8.7e-34  Score=307.65  Aligned_cols=265  Identities=21%  Similarity=0.313  Sum_probs=199.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccC--CcEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ--NEMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--~~~~lV  587 (851)
                      ++|+..+.||+|+||.||+|... +++.+++|.+....  ......+.+|+.++++++||||+++++++..+  +..++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            46777889999999999999975 46788999876442  22234567899999999999999999998776  899999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+++ +|.+++.... ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.....
T Consensus        85 ~e~~~~-~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  159 (293)
T cd07843          85 MEYVEH-DLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP  159 (293)
T ss_pred             ehhcCc-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence            999974 8988875543 368999999999999999999995   89999999999999999999999999998764332


Q ss_pred             CccccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHH----------HHHHH--H
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLA----------DWAMK--W  734 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~----------~~~~~--~  734 (851)
                      .  .......+++.|+|||.+.+. .++.++|+||||++++||++|+.|+......+.....          .|...  +
T Consensus       160 ~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (293)
T cd07843         160 L--KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL  237 (293)
T ss_pred             c--cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence            1  112334578899999998754 4689999999999999999999998754332211000          00000  0


Q ss_pred             h--hhcccccccCccCCCCCChh-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          735 Q--KQRSLKSIIDPHLKGNYSPE-SLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       735 ~--~~~~~~~i~d~~l~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .  ............+...++.. ..+.+.+++.+||+.+|++|||+.|++.|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence            0  00000011111122222222 46678999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=3e-33  Score=294.69  Aligned_cols=250  Identities=29%  Similarity=0.475  Sum_probs=205.1

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecC
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      +|+..+.||+|++|.||++... ++..+++|+...........+.+|++++++++|||++++++++..+...++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            3677889999999999999975 678899999877665567889999999999999999999999999999999999999


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccc
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~  672 (851)
                      +++|.+++.... ..+++.++..++.|++.+|.|||+   .+++||||+|+||++++++.++|+|||.+........   
T Consensus        81 ~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---  153 (253)
T cd05122          81 GGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---  153 (253)
T ss_pred             CCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccccc---
Confidence            999999986543 468999999999999999999994   9999999999999999999999999999876443221   


Q ss_pred             ccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCC
Q 047215          673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY  752 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~  752 (851)
                      .....++..|++||.+....++.++||||||+++++|++|+.|+.........      ..... ...     +.+.  .
T Consensus       154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~------~~~~~-~~~-----~~~~--~  219 (253)
T cd05122         154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKAL------FKIAT-NGP-----PGLR--N  219 (253)
T ss_pred             ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHH------HHHHh-cCC-----CCcC--c
Confidence            23456889999999999888999999999999999999999988654321111      11000 101     1111  1


Q ss_pred             ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       753 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +...+..+.+++.+||+.||++|||+.++++|
T Consensus       220 ~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         220 PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             ccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            11225668999999999999999999999988

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-33  Score=307.26  Aligned_cols=267  Identities=21%  Similarity=0.277  Sum_probs=197.4

Q ss_pred             CCceeeeeeeecceEEEEEEEcC---cceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccC--CcEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIED---CTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ--NEMI  585 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~~---~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--~~~~  585 (851)
                      .|+..++||+|+||.||+|....   +..+|+|.+....   ......+.+|+.++++++||||+++++++...  ...+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            47778899999999999998754   6889999887632   33446678899999999999999999999877  8899


Q ss_pred             EEEEecCCcchhhhccCC---CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC----CCeEEEeec
Q 047215          586 LVYEYMANGTLRSHLFGS---DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE----NFVAKMSDF  658 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~---~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~----~~~~kl~DF  658 (851)
                      +||||+++ +|.+++...   ....+++..+..++.|++.||+|||+   .+++||||||+|||++.    ++.+||+||
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df  156 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDL  156 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence            99999986 565555321   22368899999999999999999995   89999999999999999    999999999


Q ss_pred             cccccCCCCCc-cccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcch-------hcHHH
Q 047215          659 GLSKTGPSMEH-THVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ-------INLAD  729 (851)
Q Consensus       659 Gla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~-------~~l~~  729 (851)
                      |+++....... ........++..|+|||.+.+ ..++.++|||||||+++||++|+.||........       ..+..
T Consensus       157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (316)
T cd07842         157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER  236 (316)
T ss_pred             ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence            99886433221 111233467889999998876 4689999999999999999999999875433220       11111


Q ss_pred             HHHHHh-----------hhcccccccCccCCCCCC---------h--hHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          730 WAMKWQ-----------KQRSLKSIIDPHLKGNYS---------P--ESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       730 ~~~~~~-----------~~~~~~~i~d~~l~~~~~---------~--~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ....+.           .........+......++         .  .....+.+++.+||+.||++|||+.|+++|
T Consensus       237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~  313 (316)
T cd07842         237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH  313 (316)
T ss_pred             HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            111100           000000000000000111         0  334568899999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=1.8e-33  Score=304.22  Aligned_cols=248  Identities=22%  Similarity=0.356  Sum_probs=201.0

Q ss_pred             CceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          515 FDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      |...+.||+|++|.||++.. .++..+++|++........+.+.+|+.++++++||||+++++++..++..++++||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            44456899999999999986 46678999988665555566789999999999999999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      ++|.+++..   .++++.++..++.|++.||.|||+   .+++||||||+||+++.++.++|+|||++.......  ...
T Consensus       101 ~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~--~~~  172 (285)
T cd06648         101 GALTDIVTH---TRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV--PRR  172 (285)
T ss_pred             CCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCC--ccc
Confidence            999999865   358899999999999999999995   899999999999999999999999999876533211  112


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS  753 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  753 (851)
                      ....|+..|+|||.+.+..++.++|||||||+++||++|+.|+....+..      ........      ..+...  ..
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~------~~~~~~~~------~~~~~~--~~  238 (285)
T cd06648         173 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ------AMKRIRDN------LPPKLK--NL  238 (285)
T ss_pred             ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH------HHHHHHhc------CCCCCc--cc
Confidence            33458899999999988889999999999999999999999986543211      11111110      011111  11


Q ss_pred             hhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          754 PESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       754 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ...+..+.+++.+||+.+|++|||+.++++|
T Consensus       239 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  269 (285)
T cd06648         239 HKVSPRLRSFLDRMLVRDPAQRATAAELLNH  269 (285)
T ss_pred             ccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence            2345679999999999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=1.5e-33  Score=305.84  Aligned_cols=263  Identities=22%  Similarity=0.297  Sum_probs=197.4

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ++|+..+.||+|++|.||+|... +++.+++|++....  ......+.+|++++++++||||+++++++..+...++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            46888999999999999999875 57789999876432  2334678899999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-CCeEEEeeccccccCCCCC
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-NFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-~~~~kl~DFGla~~~~~~~  668 (851)
                      |++ ++|.+++.......+++..+..++.|++.||+|||+   ++++||||||+||+++. ++.+||+|||+++......
T Consensus        82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~  157 (294)
T PLN00009         82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV  157 (294)
T ss_pred             ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence            996 578777755444456788888999999999999995   89999999999999984 5689999999987533211


Q ss_pred             ccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhc--c------
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR--S------  739 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~--~------  739 (851)
                        .......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||....+.+..  ... .......  .      
T Consensus       158 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~  232 (294)
T PLN00009        158 --RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDEL--FKI-FRILGTPNEETWPGVT  232 (294)
T ss_pred             --cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHH-HHHhCCCChhhccccc
Confidence              11223456889999999876 46899999999999999999999988754332111  100 0000000  0      


Q ss_pred             -ccccc--CccCCC----CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          740 -LKSII--DPHLKG----NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       740 -~~~i~--d~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       +....  -+....    ...+..++.+.+++.+||+.+|++||++.++++|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~  284 (294)
T PLN00009        233 SLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH  284 (294)
T ss_pred             cchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             00000  000000    0122345668999999999999999999999999

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=1.7e-33  Score=307.71  Aligned_cols=246  Identities=28%  Similarity=0.405  Sum_probs=195.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ..|+..+.||+|+||.||+|... +++.+++|.+...   .......+.+|++++++++||||+++.++|..++..++|+
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            45777889999999999999864 5788999987543   2344467889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||++ |+|.+.+.... ..+++.++..++.|++.||.|||+   .+++||||+|+||++++++.+||+|||++...... 
T Consensus        95 e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-  168 (307)
T cd06607          95 EYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-  168 (307)
T ss_pred             HhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence            9997 56766664322 458999999999999999999995   89999999999999999999999999998754321 


Q ss_pred             ccccccccccCCcccCccccc---ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFW---RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                           ....++..|+|||++.   ...++.++||||||+++|||++|+.|+........      ...... .     ..
T Consensus       169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~------~~~~~~-~-----~~  231 (307)
T cd06607         169 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQ-N-----DS  231 (307)
T ss_pred             -----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH------HHHHhc-C-----CC
Confidence                 2345788999999874   45688999999999999999999998864322110      000000 0     00


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +.+   .....+..+.+++.+||+.+|.+||++.+++.|
T Consensus       232 ~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         232 PTL---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             CCC---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            111   122355679999999999999999999999998

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.4e-33  Score=328.17  Aligned_cols=268  Identities=19%  Similarity=0.219  Sum_probs=188.6

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCc--ceeEE------------------eecCCCChhhHHHHHHHHHHHHhcCCcc
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDC--TLAAI------------------KRANPQSEQGLAEFETEIEMLSKLRHRH  570 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~--~~vav------------------K~~~~~~~~~~~~~~~Ei~~l~~l~Hpn  570 (851)
                      ..++|++.++||+|+||+||++..+..  ...++                  |+.. ........+.+|+.+|++++|||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hpn  224 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHEN  224 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCC
Confidence            347899999999999999999875321  11111                  1111 12233456889999999999999


Q ss_pred             eeeEEEEEccCCcEEEEEEecCCcchhhhccCCC---CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE
Q 047215          571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSD---LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL  647 (851)
Q Consensus       571 Iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~---~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl  647 (851)
                      |+++++++...+..++|+|++.. +|.+++....   .......+...++.|++.||.|||+   ++||||||||+|||+
T Consensus       225 Iv~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl  300 (501)
T PHA03210        225 ILKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFL  300 (501)
T ss_pred             cCcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEE
Confidence            99999999999999999999864 6666664322   1223456678899999999999995   899999999999999


Q ss_pred             cCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCC-CCCcchhc
Q 047215          648 DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINP-TLPKDQIN  726 (851)
Q Consensus       648 d~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~-~~~~~~~~  726 (851)
                      +.++.+||+|||+++...... ........||..|+|||++.+..++.++|||||||+||||++|+.++.. ........
T Consensus       301 ~~~~~vkL~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~  379 (501)
T PHA03210        301 NCDGKIVLGDFGTAMPFEKER-EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ  379 (501)
T ss_pred             CCCCCEEEEeCCCceecCccc-ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence            999999999999997643321 1122345799999999999999999999999999999999999864432 22221111


Q ss_pred             HHHHHHHHhh-hc-------ccccccCc-cC---CCCCC-----hhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          727 LADWAMKWQK-QR-------SLKSIIDP-HL---KGNYS-----PESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       727 l~~~~~~~~~-~~-------~~~~i~d~-~l---~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +.+....... ..       .+...++. .+   ....+     ...+..+.+++.+||+.||.+|||+.|+|.|
T Consensus       380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            1111110000 00       00000000 00   00000     1123457888999999999999999999999

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=1.4e-33  Score=306.04  Aligned_cols=264  Identities=22%  Similarity=0.299  Sum_probs=195.3

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCc-----
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNE-----  583 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~-----  583 (851)
                      ++|+..+.||+|+||.||+|... +++.+++|+.....  ......+.+|+.++++++ ||||+++++++.....     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            46888999999999999999865 57889999866432  223457888999999995 6999999999876655     


Q ss_pred             EEEEEEecCCcchhhhccCCC---CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-CCeEEEeecc
Q 047215          584 MILVYEYMANGTLRSHLFGSD---LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-NFVAKMSDFG  659 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~---~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-~~~~kl~DFG  659 (851)
                      .++||||+++ +|.+++....   ...+++.++..++.|++.||.|||+   .+++||||||+||+++. ++.+||+|||
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecc
Confidence            8999999986 7888775432   3468999999999999999999995   89999999999999998 8999999999


Q ss_pred             ccccCCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh--
Q 047215          660 LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK--  736 (851)
Q Consensus       660 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~--  736 (851)
                      +++.......  ......+++.|+|||++.+ ..++.++||||||+++|||++|..||....+...  +.........  
T Consensus       157 ~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~--~~~~~~~~~~~~  232 (295)
T cd07837         157 LGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ--LLHIFKLLGTPT  232 (295)
T ss_pred             cceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHHHHhCCCC
Confidence            9875322111  1122346788999998865 4679999999999999999999988865432211  1100000000  


Q ss_pred             hcccccccC-------ccCC----CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          737 QRSLKSIID-------PHLK----GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       737 ~~~~~~i~d-------~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ......+..       +...    ....+..+..+.+++.+||+.+|.+||++.|++.|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~  291 (295)
T cd07837         233 EQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH  291 (295)
T ss_pred             hhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            000000000       0000    00112355678999999999999999999999999

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=9.8e-35  Score=289.17  Aligned_cols=248  Identities=23%  Similarity=0.359  Sum_probs=194.9

Q ss_pred             ceeeeeeeecceEEEEEEEcC-cceeEEeecCCC-ChhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEEEEEecC
Q 047215          516 DESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQ-SEQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       516 ~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      +....||.|+.|.|++.+... +...|||.+.+. +....+.+...+.++...+ .|.||+.+|||..+...++.||.|.
T Consensus        95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs  174 (391)
T KOG0983|consen   95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS  174 (391)
T ss_pred             hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH
Confidence            345579999999999999764 678899988775 5555667777887776664 8999999999999999999999984


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccc
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~  672 (851)
                      - .+..+|.. -.+++++..+-++...+.+||.||.+  +++|||||+||+|||+|+.|++||||||++.....   +..
T Consensus       175 ~-C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd---SkA  247 (391)
T KOG0983|consen  175 T-CAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD---SKA  247 (391)
T ss_pred             H-HHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeec---ccc
Confidence            3 44444433 33568899999999999999999998  89999999999999999999999999999866432   223


Q ss_pred             ccccccCCcccCcccccc---cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCc-chhcHHHHHHHHhhhcccccccCccC
Q 047215          673 STAVKGSFGYLDPEYFWR---QQLTEKSDVYSFGVVLFEVVCARAVINPTLPK-DQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~---~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~-~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                      .+...|.+.|||||.+.-   ..|+.++||||||+.|+||.||+.||..-..+ +....            +..-..|.|
T Consensus       248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltk------------vln~ePP~L  315 (391)
T KOG0983|consen  248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTK------------VLNEEPPLL  315 (391)
T ss_pred             cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHH------------HHhcCCCCC
Confidence            445679999999999963   47899999999999999999999998763221 11100            000011333


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ++.  ..-++.+++++..||.+|+.+||...++|+|
T Consensus       316 ~~~--~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  316 PGH--MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             Ccc--cCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence            322  1145669999999999999999999999999

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=1.3e-33  Score=305.06  Aligned_cols=253  Identities=25%  Similarity=0.384  Sum_probs=205.6

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .++.|+..+.||+|++|.||+|..+ ++..+++|.+..... ....+.+|++++++++|+|++++++++...+..++|+|
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            4566777788999999999999876 577889998876544 56778999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++++|.+++.... ..+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++....... 
T Consensus        96 ~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-  170 (286)
T cd06614          96 YMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK-  170 (286)
T ss_pred             ccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccch-
Confidence            999999999996643 368999999999999999999994   999999999999999999999999999976533221 


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                       .......++..|++||.+.+..++.++|||||||++|+|++|+.|+....+...      ..... ....     +.. 
T Consensus       171 -~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~------~~~~~-~~~~-----~~~-  236 (286)
T cd06614         171 -SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA------LFLIT-TKGI-----PPL-  236 (286)
T ss_pred             -hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHH-hcCC-----CCC-
Confidence             122334578899999999888899999999999999999999998865433211      00100 0000     001 


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       ......+..+.+++.+||+.+|.+|||+.++++|
T Consensus       237 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  270 (286)
T cd06614         237 -KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH  270 (286)
T ss_pred             -cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence             1112245678999999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-33  Score=304.12  Aligned_cols=261  Identities=23%  Similarity=0.315  Sum_probs=198.2

Q ss_pred             CceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          515 FDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      |+..++||.|++|.||+|... ++..+++|++....  ......+.+|++++++++|||++++++++..++..+++|||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            456788999999999999864 67889999876442  233457889999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      + ++|.+++.......+++.++..++.|+++||.|||+   ++++||||+|+||+++.++.++|+|||+++.......  
T Consensus        81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--  154 (283)
T cd07835          81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR--  154 (283)
T ss_pred             C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc--
Confidence            5 689998865544568999999999999999999995   8999999999999999999999999999875332111  


Q ss_pred             cccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh--------c---c
Q 047215          672 VSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ--------R---S  739 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~--------~---~  739 (851)
                      ......++..|+|||++.+. .++.++||||||+++|||++|+.||........  +..........        .   .
T Consensus       155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  232 (283)
T cd07835         155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ--LFRIFRTLGTPDEDVWPGVTSLPD  232 (283)
T ss_pred             ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCChHHhhhhhhchh
Confidence            11223468899999988654 578999999999999999999998865432111  11111100000        0   0


Q ss_pred             ----cccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          740 ----LKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       740 ----~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                          ......+.. ....+..+..+.+++.+||+.+|.+|||++|+++|
T Consensus       233 ~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  280 (283)
T cd07835         233 YKPTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH  280 (283)
T ss_pred             hhhhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence                000000000 11123344678899999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=2e-33  Score=303.06  Aligned_cols=264  Identities=24%  Similarity=0.343  Sum_probs=198.5

Q ss_pred             CceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccC--CcEEEEEE
Q 047215          515 FDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ--NEMILVYE  589 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--~~~~lV~E  589 (851)
                      |+..+.||+|+||.||+|... +++.+++|++....  ......+.+|++++++++|||++++++++...  +..++|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            567789999999999999875 46788999987653  34456788999999999999999999999877  89999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++ +|.+++.... ..+++.++..++.|+++||+|||+   .+++|+||||+||++++++.+||+|||++........
T Consensus        81 ~~~~-~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~  155 (287)
T cd07840          81 YMDH-DLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS  155 (287)
T ss_pred             cccc-cHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence            9985 8888875543 468999999999999999999995   8999999999999999999999999999876433221


Q ss_pred             cccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc-----
Q 047215          670 THVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI-----  743 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i-----  743 (851)
                       .......++..|+|||.+.+ ..++.++||||||+++|||++|+.|+..........................+     
T Consensus       156 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (287)
T cd07840         156 -ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW  234 (287)
T ss_pred             -ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchh
Confidence             11223456788999998765 46899999999999999999999998754432211110000000000000000     


Q ss_pred             ---------cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          744 ---------IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       744 ---------~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                               ....+...+...++..+.+++.+||+.+|.+||++++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence                     00000001111135678999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=2.5e-33  Score=302.15  Aligned_cols=242  Identities=24%  Similarity=0.314  Sum_probs=188.6

Q ss_pred             eeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHh---cCCcceeeEEEEEccCCcEEEEEEecC
Q 047215          520 MIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSK---LRHRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~---l~HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      +||+|+||.||++... +++.+|+|.+....   ......+.+|..+++.   .+||||+.+++++..++..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4899999999999864 57889999775432   1222334455544443   479999999999999999999999999


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccc
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~  672 (851)
                      +|+|.+++...  ..+++.++..++.|++.||.|||+   .+++||||||+|||+++++.+||+|||++......    .
T Consensus        81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~----~  151 (279)
T cd05633          81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK----K  151 (279)
T ss_pred             CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceecccc----C
Confidence            99999988543  468999999999999999999995   89999999999999999999999999998653221    1


Q ss_pred             ccccccCCcccCccccc-ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          673 STAVKGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~-~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      .....|+..|+|||.+. +..++.++|||||||+++||++|+.||..........+.    ...          ......
T Consensus       152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~----~~~----------~~~~~~  217 (279)
T cd05633         152 PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID----RMT----------LTVNVE  217 (279)
T ss_pred             ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHH----HHh----------hcCCcC
Confidence            12346899999999986 456899999999999999999999998754332211111    000          001112


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                      .++..+..+.+++.+||+.||.+||     +++|+++|
T Consensus       218 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         218 LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence            3344566789999999999999999     69999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=2e-33  Score=307.38  Aligned_cols=268  Identities=25%  Similarity=0.323  Sum_probs=199.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccC--CcEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ--NEMIL  586 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--~~~~l  586 (851)
                      .++|+..+.||+|+||.||+|... .+..+|+|.+....  ......+.+|+.++++++|+||+++++++...  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            367889999999999999999874 57889999876432  22233567899999999999999999998654  56899


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+++ +|.+++.... ..+++.++..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+++....
T Consensus        86 v~e~~~~-~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~  160 (309)
T cd07845          86 VMEYCEQ-DLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL  160 (309)
T ss_pred             EEecCCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence            9999975 7877775432 568999999999999999999995   8999999999999999999999999999876433


Q ss_pred             CCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh---ccccc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ---RSLKS  742 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~~  742 (851)
                      ...  ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||....+.+....   .......   .....
T Consensus       161 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~---~~~~~~~~~~~~~~~  235 (309)
T cd07845         161 PAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDL---IIQLLGTPNESIWPG  235 (309)
T ss_pred             ccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHhcCCCChhhchh
Confidence            211  1122345788999999865 5689999999999999999999999875443322111   1110000   00000


Q ss_pred             ccC------ccCCC----C---CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          743 IID------PHLKG----N---YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       743 i~d------~~l~~----~---~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      ..+      ..+..    .   .....++.+.+++.+||+.||++|||++|++.|         +|++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h---------~~f~~  295 (309)
T cd07845         236 FSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES---------SYFKE  295 (309)
T ss_pred             hhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC---------hhhcc
Confidence            000      00000    0   001135667899999999999999999999999         88763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=2.6e-33  Score=305.11  Aligned_cols=266  Identities=25%  Similarity=0.317  Sum_probs=197.8

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC-----
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN-----  582 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~-----  582 (851)
                      ..++|+..+.||+|+||.||+|... +++.+++|++....  ......+.+|++++++++||||+++++++....     
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            4578889999999999999999975 56788999886542  233456788999999999999999999987654     


Q ss_pred             -----cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEee
Q 047215          583 -----EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD  657 (851)
Q Consensus       583 -----~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~D  657 (851)
                           ..++|+||+++ +|.+.+... ...+++.++..++.|++.||.|||+   .+|+||||||+||++++++.+||+|
T Consensus        85 ~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~kl~d  159 (302)
T cd07864          85 KKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKLAD  159 (302)
T ss_pred             cccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEEeCc
Confidence                 78999999986 666666443 3468999999999999999999995   8999999999999999999999999


Q ss_pred             ccccccCCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh
Q 047215          658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK  736 (851)
Q Consensus       658 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~  736 (851)
                      ||++........ .......++..|+|||.+.+ ..++.++|||||||+++||++|+.|+......+.  +.........
T Consensus       160 fg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~--~~~~~~~~~~  236 (302)
T cd07864         160 FGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQ--LELISRLCGS  236 (302)
T ss_pred             ccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCC
Confidence            999876433221 11222345778999998864 4578999999999999999999988875432211  1111100000


Q ss_pred             --hccccccc--------CccC--C---CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          737 --QRSLKSII--------DPHL--K---GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       737 --~~~~~~i~--------d~~l--~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                        ......+.        ++..  .   .......+..+.+++.+||+.+|.+|||+++++.|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         237 PCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             CChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence              00000000        0000  0   00111245678999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=3.1e-33  Score=311.97  Aligned_cols=262  Identities=21%  Similarity=0.295  Sum_probs=197.8

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC------C
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ------N  582 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~------~  582 (851)
                      .++|+..+.||+|+||.||+|... .+..+|+|.+...  .......+.+|+.++++++||||+++++++...      .
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   94 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ   94 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence            478999999999999999999864 6788999987643  334456778899999999999999999988543      3


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      ..++||||+.+ +|.+.+...    +++.++..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+++
T Consensus        95 ~~~lv~e~~~~-~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~  166 (353)
T cd07850          95 DVYLVMELMDA-NLCQVIQMD----LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  166 (353)
T ss_pred             cEEEEEeccCC-CHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCccce
Confidence            57999999964 787777432    7888999999999999999995   899999999999999999999999999997


Q ss_pred             cCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcH---------HHHHHH
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL---------ADWAMK  733 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l---------~~~~~~  733 (851)
                      .....   .......++..|+|||.+.+..++.++|||||||++++|++|+.||...........         .++...
T Consensus       167 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (353)
T cd07850         167 TAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSR  243 (353)
T ss_pred             eCCCC---CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence            64321   112334578899999999999999999999999999999999999865432111000         000000


Q ss_pred             -------Hhhhcc------cccccCccC----CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          734 -------WQKQRS------LKSIIDPHL----KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       734 -------~~~~~~------~~~i~d~~l----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                             +.....      ...+....+    ........+..+.+++.+||+.||++|||+.|+|+|
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         244 LQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             hhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                   000000      001111000    001112345678999999999999999999999999

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=2.7e-33  Score=301.28  Aligned_cols=245  Identities=24%  Similarity=0.386  Sum_probs=195.8

Q ss_pred             eeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcch
Q 047215          521 IGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL  596 (851)
Q Consensus       521 LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL  596 (851)
                      ||+|+||+||++... ++..+++|.+....   ......+..|++++++++||||+++++++...+..++||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            689999999999754 57788999876432   23345677899999999999999999999999999999999999999


Q ss_pred             hhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccccccc
Q 047215          597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV  676 (851)
Q Consensus       597 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~  676 (851)
                      .+++.......+++.++..++.|++.||.|||+   .+++||||+|+||++++++.+||+|||+++....   .......
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~---~~~~~~~  154 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG---GKKIKGR  154 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhcc---CCccccc
Confidence            999876555578999999999999999999995   8999999999999999999999999999875332   1112234


Q ss_pred             ccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhH
Q 047215          677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPES  756 (851)
Q Consensus       677 ~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  756 (851)
                      .++..|+|||++.+..++.++|||||||++++|++|+.||.........  ....     ..    +.  ......+...
T Consensus       155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~~-----~~----~~--~~~~~~~~~~  221 (277)
T cd05577         155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK--EELK-----RR----TL--EMAVEYPDKF  221 (277)
T ss_pred             cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH--HHHH-----hc----cc--cccccCCccC
Confidence            5788999999998888999999999999999999999998754331110  0000     00    00  0011223344


Q ss_pred             HHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          757 LEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       757 ~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                      +..+.+++.+||+.+|.+||     ++.+++.|
T Consensus       222 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h  254 (277)
T cd05577         222 SPEAKDLCEALLQKDPEKRLGCRGGSADEVREH  254 (277)
T ss_pred             CHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence            56789999999999999999     88888888

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=2.6e-33  Score=306.00  Aligned_cols=267  Identities=22%  Similarity=0.315  Sum_probs=194.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC-------
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN-------  582 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~-------  582 (851)
                      ++|+..++||+|+||.||+|... ++..+|+|.+....  ......+.+|++++++++||||++++++|....       
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            57888999999999999999865 57789999875432  222345678999999999999999999986544       


Q ss_pred             -cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccc
Q 047215          583 -EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       583 -~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla  661 (851)
                       ..++||||+.+ +|.+.+.... ..+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++
T Consensus        92 ~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~  166 (310)
T cd07865          92 GSFYLVFEFCEH-DLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADFGLA  166 (310)
T ss_pred             ceEEEEEcCCCc-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence             45999999975 7777775433 358999999999999999999995   89999999999999999999999999998


Q ss_pred             ccCCCCCcc--ccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhc
Q 047215          662 KTGPSMEHT--HVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR  738 (851)
Q Consensus       662 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~  738 (851)
                      .........  .......++..|+|||.+.+. .++.++||||||+++|||++|+.|+....+.................
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (310)
T cd07865         167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE  246 (310)
T ss_pred             ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence            754322111  112234578899999988654 47899999999999999999999887654332222211111000000


Q ss_pred             cccc-----ccCc-cCCCCC---------ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          739 SLKS-----IIDP-HLKGNY---------SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       739 ~~~~-----i~d~-~l~~~~---------~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ....     ..+. .+....         +......+.+++.+||+.||.+|||++|+++|
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence            0000     0000 000000         00123457899999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=1.1e-33  Score=300.80  Aligned_cols=249  Identities=27%  Similarity=0.342  Sum_probs=204.9

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      +|+..++||.|+||.||++... .+..+++|.+....   ....+.+.+|++++++++||||+++++++..+...++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            4788899999999999999875 57888999886532   2456789999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++++|.+++...  .++++.++..++.|+++||.|||+   .+++|+||||+||++++++.++|+|||++....... 
T Consensus        81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-  154 (258)
T cd05578          81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-  154 (258)
T ss_pred             CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence            99999999998554  468899999999999999999994   899999999999999999999999999987643321 


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                        ......|+..|+|||.+....++.++|+||||+++|+|++|+.|+.......    .++.......          ..
T Consensus       155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~----------~~  218 (258)
T cd05578         155 --LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI----RDQIRAKQET----------AD  218 (258)
T ss_pred             --cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH----HHHHHHHhcc----------cc
Confidence              2234568889999999998889999999999999999999999987654321    1111111110          11


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCH--HHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTM--GEVLWH  784 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~--~evl~~  784 (851)
                      ...++..+..+.+++.+||+.||.+||++  +|+++|
T Consensus       219 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~  255 (258)
T cd05578         219 VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNH  255 (258)
T ss_pred             ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcC
Confidence            12334455779999999999999999999  888877

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=4.4e-33  Score=300.33  Aligned_cols=265  Identities=21%  Similarity=0.319  Sum_probs=199.3

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh-hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE-QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      +|+..++||+|++|.||+|+.. ++..+++|.+..... .....+.+|+.++++++||||+++++++...+..++||||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            4788899999999999999975 578899998875532 23456788999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCC-CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          592 ANGTLRSHLFGSD-LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       592 ~~gsL~~~L~~~~-~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      ++ +|.+++.... ...+++.++.+++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++......  
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~--  154 (284)
T cd07836          81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV--  154 (284)
T ss_pred             Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc--
Confidence            85 8888775432 3468999999999999999999995   899999999999999999999999999987532211  


Q ss_pred             ccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcH-HHHHH-----HHhhhcccccc
Q 047215          671 HVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL-ADWAM-----KWQKQRSLKSI  743 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l-~~~~~-----~~~~~~~~~~i  743 (851)
                      .......++..|++||++.+ ..++.++|||||||++|||++|+.|+......+.... .+...     .+.........
T Consensus       155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T cd07836         155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEY  234 (284)
T ss_pred             cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchh
Confidence            11223456889999999865 4578999999999999999999999876543221110 00000     00000000000


Q ss_pred             cC--ccC----CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          744 ID--PHL----KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       744 ~d--~~l----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..  +..    .....+..+..+.+++.+||+.||.+||++.|+++|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  281 (284)
T cd07836         235 KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH  281 (284)
T ss_pred             cccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            00  000    001112345678899999999999999999999988

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=4.1e-33  Score=306.17  Aligned_cols=249  Identities=26%  Similarity=0.369  Sum_probs=196.8

Q ss_pred             CceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          515 FDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      |+..+.||+|+||.||+|+.. ++..+++|++...   .......+.+|++++++++|||++++++++..++..++||||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            556778999999999999864 5778899987643   233446788999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++ +|.+.+... ..++++.++..++.|++.||.|||+   .+++||||+|+||+++.++.+||+|||++.....    
T Consensus       107 ~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~----  177 (317)
T cd06635         107 CLG-SASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASP----  177 (317)
T ss_pred             CCC-CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCC----
Confidence            974 777776433 3458999999999999999999995   8999999999999999999999999999865322    


Q ss_pred             ccccccccCCcccCccccc---ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          671 HVSTAVKGSFGYLDPEYFW---RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~---~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                        .....|+..|+|||++.   ...++.++|||||||++|||++|+.|+........      .......         .
T Consensus       178 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~------~~~~~~~---------~  240 (317)
T cd06635         178 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQN---------E  240 (317)
T ss_pred             --cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH------HHHHHhc---------c
Confidence              12345788999999974   45789999999999999999999998765322111      0111000         0


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                      .........+..+.+++.+||+.+|.+||++.++++|+....
T Consensus       241 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  282 (317)
T cd06635         241 SPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR  282 (317)
T ss_pred             CCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence            111112344567899999999999999999999999955443

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=2e-33  Score=311.39  Aligned_cols=266  Identities=24%  Similarity=0.331  Sum_probs=198.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccC--CcEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQ--NEMI  585 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~--~~~~  585 (851)
                      .++|+..+.||+|+||.||+|... ++..+++|++...  .......+.+|+.+++++ +||||++++++|...  ...+
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            467888889999999999999875 5678899987542  334455678899999999 999999999998543  4689


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      +||||++ ++|.+++...   .+.+..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++...
T Consensus        86 lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~  158 (337)
T cd07852          86 LVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSLS  158 (337)
T ss_pred             EEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence            9999997 5998888543   57899999999999999999995   899999999999999999999999999987643


Q ss_pred             CCCcc---ccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHH---------
Q 047215          666 SMEHT---HVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM---------  732 (851)
Q Consensus       666 ~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~---------  732 (851)
                      .....   .......|+..|+|||.+.+ ..++.++||||||+++|||++|+.||....+.+.........         
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  238 (337)
T cd07852         159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIE  238 (337)
T ss_pred             cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence            32211   12234568899999998764 568899999999999999999999986544332211100000         


Q ss_pred             HH---hhhcccccccCccCC--CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          733 KW---QKQRSLKSIIDPHLK--GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       733 ~~---~~~~~~~~i~d~~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .+   .....+..+......  ....+..+..+.+++.+||+.+|.+|||+.++++|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         239 SIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            00   000000000000000  01112245678999999999999999999999998

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-33  Score=312.50  Aligned_cols=263  Identities=24%  Similarity=0.341  Sum_probs=196.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccC-----CcE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ-----NEM  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~-----~~~  584 (851)
                      +++|+..++||+|+||.||+|.. .+++.+|+|.+.... ......+.+|+.++++++||||+++++++...     ...
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            46899999999999999999985 467889999886532 33446688899999999999999999987543     358


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ++|+||+++ +|.+++..   ..+++..+..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++..
T Consensus        84 ~lv~e~~~~-~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~  156 (336)
T cd07849          84 YIVQELMET-DLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARIA  156 (336)
T ss_pred             EEEehhccc-CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccceeec
Confidence            999999975 78777743   358899999999999999999995   89999999999999999999999999998754


Q ss_pred             CCCCc-cccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh---cc
Q 047215          665 PSMEH-THVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ---RS  739 (851)
Q Consensus       665 ~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~  739 (851)
                      ..... ........|+..|+|||.+.+ ..++.++|||||||++|||++|+.||........   ..........   ..
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~---~~~~~~~~~~~~~~~  233 (336)
T cd07849         157 DPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQ---LNLILGVLGTPSQED  233 (336)
T ss_pred             cccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcCCCCHHH
Confidence            32111 111233568899999998754 5689999999999999999999998865322111   0000000000   00


Q ss_pred             cccccCcc---------CCCC-----CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          740 LKSIIDPH---------LKGN-----YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       740 ~~~i~d~~---------l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ...+.+..         ....     ..+..+..+.+++.+||+.+|++|||+.|+++|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            00000000         0000     011234668899999999999999999999999

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=5.8e-33  Score=298.93  Aligned_cols=258  Identities=24%  Similarity=0.291  Sum_probs=193.0

Q ss_pred             CceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC-hhhHHHHHHHHHHHHhcC-CcceeeEEEEEccC--CcEEEEEE
Q 047215          515 FDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-EQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQ--NEMILVYE  589 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~--~~~~lV~E  589 (851)
                      |+..++||+|+||.||+|... ++..+++|+..... ........+|+.+++++. |||++++++++..+  +..++|+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            556788999999999999864 57788999876542 222234457899999985 99999999999877  89999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |++ |+|.+.+.... ..+++.++..++.|++.||.|||+   .+++||||||+||+++. +.+||+|||+++.......
T Consensus        81 ~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~  154 (282)
T cd07831          81 LMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP  154 (282)
T ss_pred             cCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence            997 57777775433 468999999999999999999995   89999999999999999 9999999999876432211


Q ss_pred             cccccccccCCcccCccccc-ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHh-----------hh
Q 047215          670 THVSTAVKGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ-----------KQ  737 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~-~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~-----------~~  737 (851)
                         .....++..|+|||++. ...++.++|||||||++|||++|..||....+.+   ...+.....           ..
T Consensus       155 ---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  228 (282)
T cd07831         155 ---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD---QIAKIHDVLGTPDAEVLKKFRK  228 (282)
T ss_pred             ---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH---HHHHHHHHcCCCCHHHHHhhcc
Confidence               12345788999999765 4567899999999999999999999986543322   111111100           00


Q ss_pred             cccccccCccCCC----CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          738 RSLKSIIDPHLKG----NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       738 ~~~~~i~d~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ........+....    ...+..+..+.+++.+||+.+|++||+++++++|
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence            0000000010000    0112456789999999999999999999999999

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.5e-33  Score=312.49  Aligned_cols=264  Identities=23%  Similarity=0.312  Sum_probs=197.9

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC-----Cc
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ-----NE  583 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~-----~~  583 (851)
                      .++|...+.||+|+||.||+|+.. .+..++||.+...  .......+.+|+.+++.++||||+++++++...     ..
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            357889999999999999999864 5788999987653  333445678899999999999999999988543     35


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .++|+||+. ++|.+++...  .++++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~  157 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLART  157 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence            899999996 6888887543  468999999999999999999995   8999999999999999999999999999986


Q ss_pred             CCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHH--------HH
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM--------KW  734 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~--------~~  734 (851)
                      .....  .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||.............-..        ..
T Consensus       158 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (337)
T cd07858         158 TSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF  235 (337)
T ss_pred             cCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence            43321  12233457889999998864 568999999999999999999999986542211111000000        00


Q ss_pred             hhhcccc-------cccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          735 QKQRSLK-------SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       735 ~~~~~~~-------~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .......       ...++... ...+.++..+.+++.+||+.+|++|||++++++|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h  291 (337)
T cd07858         236 IRNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH  291 (337)
T ss_pred             cCchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence            0000000       00001000 1123456778999999999999999999999999

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=4.1e-33  Score=307.74  Aligned_cols=260  Identities=21%  Similarity=0.317  Sum_probs=195.2

Q ss_pred             eeeee--cceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCc
Q 047215          520 MIGVG--GFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANG  594 (851)
Q Consensus       520 ~LG~G--~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~g  594 (851)
                      .||+|  +||+||+++. ..++.||+|.....  .....+.+.+|+.+++.++||||+++++++..++..++|+||++++
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~   84 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG   84 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence            46666  9999999986 46789999987643  3344578899999999999999999999999999999999999999


Q ss_pred             chhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc---
Q 047215          595 TLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH---  671 (851)
Q Consensus       595 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~---  671 (851)
                      +|.+++.......+++..+..++.|++.||+|||+   .+++||||||+|||++.++.+|++||+.+..........   
T Consensus        85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (328)
T cd08226          85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV  161 (328)
T ss_pred             CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence            99999876544568899999999999999999995   899999999999999999999999998653221110000   


Q ss_pred             --cccccccCCcccCccccccc--CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHH---------------
Q 047215          672 --VSTAVKGSFGYLDPEYFWRQ--QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM---------------  732 (851)
Q Consensus       672 --~~~~~~gt~~y~aPE~~~~~--~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~---------------  732 (851)
                        ......++..|+|||++.+.  .++.++|||||||+++||++|+.||........  ......               
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  239 (328)
T cd08226         162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM--LLQKLKGPPYSPLDITTFPCE  239 (328)
T ss_pred             ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH--HHHHhcCCCCCCccccccchh
Confidence              01112345679999999763  578999999999999999999999875432211  000000               


Q ss_pred             --HH---------------hhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          733 --KW---------------QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       733 --~~---------------~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                        ..               ........+.+..+.......+...+.+|+.+||+.||++|||+.|+++|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~  308 (328)
T cd08226         240 ESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH  308 (328)
T ss_pred             hhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence              00               00000001111222222334567789999999999999999999999999

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=4.5e-33  Score=294.74  Aligned_cols=250  Identities=27%  Similarity=0.430  Sum_probs=205.5

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +|+..+.||+|+||.||++... ++..+++|++....  ......+.+|++++++++|||++++++.+..+...++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            4778889999999999999875 56788999887653  35567789999999999999999999999988999999999


Q ss_pred             cCCcchhhhccCCC--CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          591 MANGTLRSHLFGSD--LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       591 ~~~gsL~~~L~~~~--~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      +++++|.+++....  ...+++.++..++.+++.||.|||+   .+++|+||+|+||+++.++.++|+|||++.......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence            99999999986543  4678999999999999999999995   899999999999999999999999999987643322


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                        .......|++.|+|||.+....++.++||||+|+++++|++|+.|+......      +....... ..         
T Consensus       158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~------~~~~~~~~-~~---------  219 (258)
T cd08215         158 --DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL------ELALKILK-GQ---------  219 (258)
T ss_pred             --ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH------HHHHHHhc-CC---------
Confidence              1233456888999999999889999999999999999999999988654321      11111110 00         


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ....+...+..+.+++.+||..+|++|||+.++++|
T Consensus       220 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         220 YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            112233455678999999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=3.4e-33  Score=303.67  Aligned_cols=252  Identities=24%  Similarity=0.370  Sum_probs=193.9

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCC-hhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQS-EQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ++|+..+.||+|+||.||+|..++ ++.+|||++.... ......+..|+.++.++. ||||++++++|..+...++|||
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   94 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME   94 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence            567888899999999999999865 7889999986542 234456677887777775 9999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++ +|.+++.... ..+++.++.+++.|++.||+|||+  ..+++||||+|+||++++++.+||+|||++....... 
T Consensus        95 ~~~~-~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~-  169 (296)
T cd06618          95 LMST-CLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK-  169 (296)
T ss_pred             ccCc-CHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC-
Confidence            9864 6666654322 368999999999999999999995  4689999999999999999999999999987532211 


Q ss_pred             cccccccccCCcccCcccccccC----CCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQ----LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~----~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                        ......++..|+|||++.+..    ++.++||||||+++|||++|+.||.......     +........ ..     
T Consensus       170 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~~~-~~-----  236 (296)
T cd06618         170 --AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF-----EVLTKILQE-EP-----  236 (296)
T ss_pred             --cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH-----HHHHHHhcC-CC-----
Confidence              112335788999999987554    8899999999999999999999986422110     001111000 00     


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +..  ......+..+.+++.+||+.||.+||++++++.|
T Consensus       237 ~~~--~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         237 PSL--PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             CCC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            011  1111345678999999999999999999999999

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=3.1e-33  Score=301.07  Aligned_cols=261  Identities=22%  Similarity=0.306  Sum_probs=200.0

Q ss_pred             CceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh--hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          515 FDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE--QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      |+..+.||+|++|.||++... +++.+++|++.....  .....+.+|++++++++||||+++++++..++..++|+||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            455678999999999999864 678889998765432  34567889999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++ +|.+++.... ..+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||.+.......  .
T Consensus        81 ~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~  153 (283)
T cd05118          81 DT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--R  153 (283)
T ss_pred             CC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--c
Confidence            75 8887775543 568999999999999999999995   899999999999999999999999999987644322  1


Q ss_pred             cccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh--hcccccccC---
Q 047215          672 VSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK--QRSLKSIID---  745 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~--~~~~~~i~d---  745 (851)
                      ......++..|+|||.+.+. .++.++||||||+++++|++|+.||......+......  .....  ......+.+   
T Consensus       154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  231 (283)
T cd05118         154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIF--RTLGTPDPEVWPKFTSLAR  231 (283)
T ss_pred             cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--HHcCCCchHhcccchhhhh
Confidence            12234578889999998876 78999999999999999999998886543322111100  00000  000000000   


Q ss_pred             ------ccC----CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          746 ------PHL----KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       746 ------~~l----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                            +..    .....+..+..+.+++.+||+.||.+||++++++.|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         232 NYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             hhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence                  000    011123456789999999999999999999999998

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=6.3e-33  Score=299.30  Aligned_cols=261  Identities=26%  Similarity=0.332  Sum_probs=196.2

Q ss_pred             CceeeeeeeecceEEEEEEEcC-cceeEEeecCCCC--hhhHHHHHHHHHHHHhc---CCcceeeEEEEEccCCc-----
Q 047215          515 FDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQS--EQGLAEFETEIEMLSKL---RHRHLVSLIGFCDEQNE-----  583 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l---~HpnIv~l~g~~~~~~~-----  583 (851)
                      |+..+.||+|+||.||+|+.+. ++.+++|++....  ......+.+|+.+++++   +|||++++++++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            5677899999999999999764 7889999886432  22234566788877766   59999999999987776     


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .+++|||+++ +|.+++.......+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++..
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~~~~  156 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLARI  156 (287)
T ss_pred             eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCccee
Confidence            9999999975 88888865444568999999999999999999995   8999999999999999999999999999876


Q ss_pred             CCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc--
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK--  741 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~--  741 (851)
                      ......   .....++..|+|||.+.+..++.++|||||||++|||++|+.|+......+.  +..............  
T Consensus       157 ~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  231 (287)
T cd07838         157 YSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQ--LDKIFDVIGLPSEEEWP  231 (287)
T ss_pred             ccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHH--HHHHHHHcCCCChHhcC
Confidence            432211   1233478899999999999999999999999999999999888765433211  111111100000000  


Q ss_pred             -------cccCccCC---CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          742 -------SIIDPHLK---GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       742 -------~i~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                             ........   ....++....+.+++.+||+.||.+||++++++.|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         232 RNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH  284 (287)
T ss_pred             CCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence                   00000000   11123445778899999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=2.5e-33  Score=298.22  Aligned_cols=242  Identities=26%  Similarity=0.372  Sum_probs=196.1

Q ss_pred             eeeecceEEEEEEEcC-cceeEEeecCCCCh---hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcch
Q 047215          521 IGVGGFGKVFKGEIED-CTLAAIKRANPQSE---QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL  596 (851)
Q Consensus       521 LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL  596 (851)
                      ||+|+||.||+++... ++.+++|.+.....   .....+.+|++++++++||||+++++.+..++..++++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            6899999999999764 78899998865433   4566789999999999999999999999999999999999999999


Q ss_pred             hhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc------c
Q 047215          597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH------T  670 (851)
Q Consensus       597 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~------~  670 (851)
                      .+++....  .+++..+..++.|++.||.|||+   .+++||||+|+||++++++.+||+|||++........      .
T Consensus        81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  155 (265)
T cd05579          81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE  155 (265)
T ss_pred             HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence            99986543  68999999999999999999994   8999999999999999999999999999875432211      1


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      .......++..|++||.+.....+.++||||||++++||++|+.|+....+.+      ....... +        ..  
T Consensus       156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~------~~~~~~~-~--------~~--  218 (265)
T cd05579         156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE------IFQNILN-G--------KI--  218 (265)
T ss_pred             ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHhc-C--------Cc--
Confidence            12234557889999999988889999999999999999999999986543221      1111111 0        00  


Q ss_pred             CCChh--HHHHHHHHHHHhcccCCCCCCCH---HHHHHH
Q 047215          751 NYSPE--SLEKFGEIAEKCLDDEGKNRPTM---GEVLWH  784 (851)
Q Consensus       751 ~~~~~--~~~~l~~l~~~Cl~~dP~~RPt~---~evl~~  784 (851)
                      ..+..  .+..+.+++.+||+.+|.+|||+   .++++|
T Consensus       219 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~  257 (265)
T cd05579         219 EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH  257 (265)
T ss_pred             CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence            11112  25678999999999999999999   887777

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-34  Score=289.30  Aligned_cols=248  Identities=27%  Similarity=0.365  Sum_probs=204.5

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..++||+|.||+|.+++- ..++.+|+|++++.   .++....-..|-++|+..+||.+..|.-.++..+++|+||
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM  247 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM  247 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence            6788899999999999999974 46788999998765   4455566678999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||..+|.|.-+|...  ..+++......-..|+.||.|||+   ++||.||||.+|.|||.+|.+||+||||++...  .
T Consensus       248 eyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I--~  320 (516)
T KOG0690|consen  248 EYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI--K  320 (516)
T ss_pred             EEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhcc--c
Confidence            999999999998543  457777777788899999999996   999999999999999999999999999998643  3


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                      ........|||+.|+|||++....|...+|.|.+||++|||+||+.||.......-..+               |+-..+
T Consensus       321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeL---------------Il~ed~  385 (516)
T KOG0690|consen  321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFEL---------------ILMEDL  385 (516)
T ss_pred             ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHH---------------HHhhhc
Confidence            44456789999999999999999999999999999999999999999976543221111               111111


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPT-----MGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  784 (851)
                        .+|....++.+.|+...|.+||.+|..     +.||.+|
T Consensus       386 --kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h  424 (516)
T KOG0690|consen  386 --KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH  424 (516)
T ss_pred             --cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence              234444556788999999999999963     6677666

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-32  Score=294.28  Aligned_cols=251  Identities=25%  Similarity=0.341  Sum_probs=199.2

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-----ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC--CcE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-----SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ--NEM  584 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--~~~  584 (851)
                      .+|+..+.||+|+||.||+|+.. ++..+++|.....     .......+.+|++++++++||||+++++++...  +..
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            47888999999999999999864 5788999976432     234456789999999999999999999998653  568


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ++++||+++++|.+++...  ..+++....+++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||+++..
T Consensus        82 ~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~  156 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRI  156 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence            8999999999999998543  357889999999999999999995   89999999999999999999999999998754


Q ss_pred             CCCCc-cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          665 PSMEH-THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       665 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      ..... ........++..|+|||++.+..++.++|+|||||+++||++|+.||........      ...         +
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~---------~  221 (264)
T cd06653         157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA------IFK---------I  221 (264)
T ss_pred             ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH------HHH---------H
Confidence            22111 1111234588999999999988899999999999999999999999865322111      000         1


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ........++....+.+.+++.+||+ +|..||+..+++.|
T Consensus       222 ~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~  261 (264)
T cd06653         222 ATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH  261 (264)
T ss_pred             HcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence            11111123445566779999999999 57999999999887

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=4.4e-33  Score=309.35  Aligned_cols=259  Identities=24%  Similarity=0.357  Sum_probs=193.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC------C
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ------N  582 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~------~  582 (851)
                      .++|...+.||+|+||.||+|... ++..+|+|++...  .......+.+|+.++++++||||+++++++...      .
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            378999999999999999999864 6788999987643  223345688999999999999999999998654      3


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      ..++|+||+.. +|..++.    ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++
T Consensus        94 ~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg~~~  165 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFGLAR  165 (342)
T ss_pred             eEEEEeccccc-CHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence            46999999974 6766542    357899999999999999999995   899999999999999999999999999987


Q ss_pred             cCCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHH---------H
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA---------M  732 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~---------~  732 (851)
                      .....     .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...............         .
T Consensus       166 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  240 (342)
T cd07879         166 HADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQ  240 (342)
T ss_pred             CCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence            63221     123457889999999876 56899999999999999999999999754322111100000         0


Q ss_pred             HHhhhcccccccC--ccC-CCC---CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          733 KWQKQRSLKSIID--PHL-KGN---YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       733 ~~~~~~~~~~i~d--~~l-~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .... ........  +.. ...   ..+.....+.+++.+||+.||.+||++++++.|
T Consensus       241 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h  297 (342)
T cd07879         241 KLED-KAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH  297 (342)
T ss_pred             Hhcc-cchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            0000 00000000  000 000   011234568899999999999999999999999

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-32  Score=290.64  Aligned_cols=248  Identities=26%  Similarity=0.415  Sum_probs=203.9

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh--hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE--QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +|+..+.||+|++|.||+++.. .++.+++|.......  .....+.+|++++++++|||++++++++..++..++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            4677889999999999999865 567899998876643  4567899999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++...  ..+++..+..++.|++.+|.|||+   .+++||||||+||+++.++.+||+|||++........ 
T Consensus        81 ~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-  154 (254)
T cd06627          81 AENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK-  154 (254)
T ss_pred             CCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc-
Confidence            9999999998554  568999999999999999999995   8999999999999999999999999999876443222 


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                       ......++..|+|||.+.+..++.++||||+|+++++|++|+.|+....+...    .|.  .. ..         ...
T Consensus       155 -~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~----~~~--~~-~~---------~~~  217 (254)
T cd06627         155 -DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA----LFR--IV-QD---------DHP  217 (254)
T ss_pred             -cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH----HHH--Hh-cc---------CCC
Confidence             12345678899999999888899999999999999999999998864332110    010  00 00         111


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..+...+..+.+++.+||..+|++|||+.+++.+
T Consensus       218 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  251 (254)
T cd06627         218 PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH  251 (254)
T ss_pred             CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence            2334456678999999999999999999999987

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=1.9e-33  Score=311.19  Aligned_cols=267  Identities=20%  Similarity=0.286  Sum_probs=199.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEcc----CCcE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDE----QNEM  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~----~~~~  584 (851)
                      .++|+..+.||+|+||.||+|... .+..+++|++....  ......+.+|+.++++++||||+++++++..    ....
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            368888999999999999999864 57889999876542  2345667889999999999999999998753    3568


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ++||||+. |+|.+++...  ..+++..+..++.|+++||.|||+   .+++||||||+||++++++.+||+|||+++..
T Consensus        84 ~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~  157 (334)
T cd07855          84 YVVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMARGL  157 (334)
T ss_pred             EEEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccceee
Confidence            99999996 6898888543  358999999999999999999995   89999999999999999999999999998754


Q ss_pred             CCCCc--cccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHH--------
Q 047215          665 PSMEH--THVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMK--------  733 (851)
Q Consensus       665 ~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~--------  733 (851)
                      .....  ........|+..|+|||.+.. ..++.++|||||||++|||++|+.||.................        
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~  237 (334)
T cd07855         158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN  237 (334)
T ss_pred             cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence            32211  111234468899999999865 5689999999999999999999999976443222111000000        


Q ss_pred             Hhhhccccccc---CccCC---CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          734 WQKQRSLKSII---DPHLK---GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       734 ~~~~~~~~~i~---d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ........+..   .....   ....+..+..+.+++++||+.+|.+||++++++.|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  294 (334)
T cd07855         238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH  294 (334)
T ss_pred             hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            00000000000   00000   00112346779999999999999999999999999

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=1.6e-32  Score=293.98  Aligned_cols=248  Identities=18%  Similarity=0.232  Sum_probs=191.7

Q ss_pred             HHHHhcCCceeeee--eeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCc
Q 047215          508 IRVATNNFDESLMI--GVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNE  583 (851)
Q Consensus       508 l~~~t~~f~~~~~L--G~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~  583 (851)
                      +....++|++.+.+  |+|+||.||++... ++..+++|.........     .|+.....+ +||||+++++++..++.
T Consensus         9 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~~   83 (267)
T PHA03390          9 LVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLKG   83 (267)
T ss_pred             HHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCCe
Confidence            33344566666666  99999999999864 56778888876432111     122222222 79999999999999999


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC-eEEEeeccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF-VAKMSDFGLSK  662 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~-~~kl~DFGla~  662 (851)
                      .++||||+++|+|.+++....  .+++.++..++.|+++||.|||+   .+++||||||+||+++.++ .++|+|||+++
T Consensus        84 ~~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~  158 (267)
T PHA03390         84 HVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGLCK  158 (267)
T ss_pred             eEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecCccce
Confidence            999999999999999986543  78999999999999999999995   8899999999999999888 99999999987


Q ss_pred             cCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      .....      ....++..|+|||++.+..++.++||||||++++||++|+.|+..... +......+....        
T Consensus       159 ~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~--------  223 (267)
T PHA03390        159 IIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED-EELDLESLLKRQ--------  223 (267)
T ss_pred             ecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc-chhhHHHHHHhh--------
Confidence            53221      224578999999999998999999999999999999999999874322 222222222111        


Q ss_pred             ccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCC-HHHHHHH
Q 047215          743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT-MGEVLWH  784 (851)
Q Consensus       743 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~evl~~  784 (851)
                        ...  .......+..+.+++.+||+.+|.+||+ ++|+++|
T Consensus       224 --~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h  262 (267)
T PHA03390        224 --QKK--LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH  262 (267)
T ss_pred             --ccc--CCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence              000  0112245567899999999999999996 6999999

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=6.9e-33  Score=300.77  Aligned_cols=244  Identities=23%  Similarity=0.360  Sum_probs=197.5

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcchh
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR  597 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~  597 (851)
                      .+||+|+||.||++..+ ++..+++|++..........+.+|+.++++++||||+++++++..++..++||||+++++|.
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            46999999999999874 67889999886655556677999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccc
Q 047215          598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK  677 (851)
Q Consensus       598 ~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~  677 (851)
                      +++..   ..+++.....++.|++.+|+|||+   .+++||||||+||+++.++.++|+|||++.......  .......
T Consensus       106 ~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~--~~~~~~~  177 (292)
T cd06657         106 DIVTH---TRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKSLV  177 (292)
T ss_pred             HHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceeccccc--ccccccc
Confidence            98743   347899999999999999999995   899999999999999999999999999986543221  1123356


Q ss_pred             cCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHH
Q 047215          678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESL  757 (851)
Q Consensus       678 gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~  757 (851)
                      |+..|+|||.+.+..++.++|+||||+++|||++|..|+........   ..   ... .     ...+.+.  .....+
T Consensus       178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~---~~---~~~-~-----~~~~~~~--~~~~~~  243 (292)
T cd06657         178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA---MK---MIR-D-----NLPPKLK--NLHKVS  243 (292)
T ss_pred             cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HH---HHH-h-----hCCcccC--CcccCC
Confidence            88999999999888899999999999999999999998865332211   11   000 0     0111111  112334


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          758 EKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       758 ~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..+.+++.+||+.+|.+||++.+++.|
T Consensus       244 ~~l~~li~~~l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         244 PSLKGFLDRLLVRDPAQRATAAELLKH  270 (292)
T ss_pred             HHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence            568899999999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=9.7e-33  Score=297.49  Aligned_cols=263  Identities=24%  Similarity=0.343  Sum_probs=197.4

Q ss_pred             CceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh-hhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEEEEEec
Q 047215          515 FDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE-QGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      |+..+.||+|++|.||+|... .+..++||++..... .......+|+..+++++ ||||+++++++..++..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            456788999999999999975 467889998765422 22234567999999999 999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                       +|+|.+++.......+++.++..++.|++.+|.|||+   .+++|+||||+||++++++.++|+|||++.......   
T Consensus        81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~---  153 (283)
T cd07830          81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP---  153 (283)
T ss_pred             -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCCC---
Confidence             7899998866554578999999999999999999995   899999999999999999999999999987543211   


Q ss_pred             cccccccCCcccCccccc-ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcH----------HHHHHHHhhhccc
Q 047215          672 VSTAVKGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL----------ADWAMKWQKQRSL  740 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~-~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l----------~~~~~~~~~~~~~  740 (851)
                      ......++..|+|||++. ...++.++|+||||++++||++|+.|+......+....          ..|..........
T Consensus       154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (283)
T cd07830         154 PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKL  233 (283)
T ss_pred             CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccc
Confidence            122345788999999885 45689999999999999999999988865533221100          0011111000001


Q ss_pred             ccccCccC---CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 KSIIDPHL---KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 ~~i~d~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ........   .....+.....+.+++.+||+.+|.+|||++|++.|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         234 GFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             cccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence            00000000   001111224678999999999999999999999988

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.7e-33  Score=308.11  Aligned_cols=262  Identities=25%  Similarity=0.330  Sum_probs=201.3

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC-----cEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN-----EMI  585 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~-----~~~  585 (851)
                      +|+..+.||+|++|.||+|+.. .+..+++|++....  ....+.+.+|+.++++++||||+++++++....     ..+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            4778889999999999999975 47889999887643  444567899999999999999999999987765     789


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      +||||++ ++|.+++....  .+++..+..++.|++.||.|||+   .+++||||||.|||++.++.++|+|||++....
T Consensus        81 lv~e~~~-~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~  154 (330)
T cd07834          81 IVTELME-TDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGVD  154 (330)
T ss_pred             EEecchh-hhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence            9999998 48888885433  78999999999999999999995   899999999999999999999999999998644


Q ss_pred             CCCc-cccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh-------
Q 047215          666 SMEH-THVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK-------  736 (851)
Q Consensus       666 ~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~-------  736 (851)
                      .... ........++..|+|||.+.+. .++.++|+||||+++++|++|+.||......+....   ......       
T Consensus       155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~---i~~~~~~~~~~~~  231 (330)
T cd07834         155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNL---IVEVLGTPSEEDL  231 (330)
T ss_pred             ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHH---HHHhcCCCChhHh
Confidence            3221 0112334578899999999887 899999999999999999999999876543221110   000000       


Q ss_pred             ----hcccccccC---ccC---CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          737 ----QRSLKSIID---PHL---KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       737 ----~~~~~~i~d---~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                          .......+.   ..-   .....+..+..+.+++.+||+.+|.+|||+++++.|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  289 (330)
T cd07834         232 KFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH  289 (330)
T ss_pred             hhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence                000000000   000   000112345678999999999999999999999999

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-33  Score=296.36  Aligned_cols=255  Identities=25%  Similarity=0.362  Sum_probs=207.6

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      ..+.|..-++||+||||.||-.+.. .|+.+|.|++.+.   .+++......|-.+|.+++.+.||.|--.++.++.+++
T Consensus       183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl  262 (591)
T KOG0986|consen  183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL  262 (591)
T ss_pred             cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence            3467888999999999999988754 5788888876543   33444557789999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      |+..|.||+|.-||.+...+.+++..++..+.+|+.||++||   +.+||.|||||+|||||+.|.++|+|+|||...+.
T Consensus       263 VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~  339 (591)
T KOG0986|consen  263 VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE  339 (591)
T ss_pred             EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence            999999999999999888888999999999999999999999   59999999999999999999999999999987543


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      ..   ......||.+|||||+++...|+...|.||+||+||||+.|+.||..........-   +.+        .+.. 
T Consensus       340 g~---~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eE---vdr--------r~~~-  404 (591)
T KOG0986|consen  340 GK---PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREE---VDR--------RTLE-  404 (591)
T ss_pred             CC---ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHH---HHH--------HHhc-
Confidence            22   23344799999999999999999999999999999999999999865432211100   000        0110 


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPT-----MGEVLWH  784 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  784 (851)
                       -...++..-+++++.|.+..|++||++|..     +++|-+|
T Consensus       405 -~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H  446 (591)
T KOG0986|consen  405 -DPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH  446 (591)
T ss_pred             -chhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC
Confidence             011344455566888999999999999874     5678777

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=9.1e-33  Score=292.68  Aligned_cols=248  Identities=25%  Similarity=0.355  Sum_probs=202.9

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +|+..++||+|+||.||++... ++..+++|.+...  .......+.+|++++++++||||+++++++..+...++|+||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            4778889999999999999754 5678899987653  334456788999999999999999999999989999999999


Q ss_pred             cCCcchhhhccCC--CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          591 MANGTLRSHLFGS--DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       591 ~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      +++++|.+++...  ....+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||+++..... 
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-  156 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-  156 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence            9999999988542  23568899999999999999999995   89999999999999999999999999999764432 


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                         ......++..|++||.+.+..++.++|+||||++++||++|+.|+......+   +..   .. ..         ..
T Consensus       157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~~~---~~-~~---------~~  217 (256)
T cd08530         157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD---LRY---KV-QR---------GK  217 (256)
T ss_pred             ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHH---HH-hc---------CC
Confidence               2223457889999999999999999999999999999999999986543221   111   00 01         11


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ....+...+..+.+++.+||+.+|.+||++.++++|
T Consensus       218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         218 YPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             CCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            112233456779999999999999999999999987

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=1.8e-32  Score=295.25  Aligned_cols=248  Identities=23%  Similarity=0.307  Sum_probs=192.2

Q ss_pred             eeeeecceEEEEEEEc-CcceeEEeecCCCCh---hhHHHHHHHHH---HHHhcCCcceeeEEEEEccCCcEEEEEEecC
Q 047215          520 MIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE---QGLAEFETEIE---MLSKLRHRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~---~~~~~~~~Ei~---~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      +||+|+||.||++... .++.+|+|.+.....   .....+..|..   .++...||||+++++++...+..++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            4899999999999864 567899998765421   22223444444   3444579999999999999999999999999


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccc
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~  672 (851)
                      +|+|.+++...  ..+++.++..++.|+++||.|||+   .+++||||||+||+++.++.+||+|||+++.....    .
T Consensus        81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~----~  151 (278)
T cd05606          81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK----K  151 (278)
T ss_pred             CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc----C
Confidence            99999988543  468999999999999999999995   89999999999999999999999999998753221    1


Q ss_pred             ccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          673 STAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      .....|+..|+|||.+.+. .++.++||||+||++|||++|+.||............    ...      ....+    .
T Consensus       152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~----~~~------~~~~~----~  217 (278)
T cd05606         152 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID----RMT------LTMAV----E  217 (278)
T ss_pred             CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH----HHh------hccCC----C
Confidence            2234689999999998744 6899999999999999999999998765332211110    000      00111    2


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHHHhhhhhcccC
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      .+...+..+.+++.+||..+|.+||     ++.++++|         +|+.+.
T Consensus       218 ~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~---------~~~~~~  261 (278)
T cd05606         218 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH---------PFFRSL  261 (278)
T ss_pred             CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC---------ccccCC
Confidence            2333456789999999999999999     99999998         777653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1e-32  Score=306.77  Aligned_cols=270  Identities=23%  Similarity=0.289  Sum_probs=202.1

Q ss_pred             ccCHHHHHHHhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEE
Q 047215          502 RFTLAEIRVATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFC  578 (851)
Q Consensus       502 ~~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~  578 (851)
                      .....++...+++|+..+.||+|+||.||+|.. .++..+|+|++...  .....+.+.+|+.++++++||||+++++++
T Consensus         6 ~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~   85 (345)
T cd07877           6 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF   85 (345)
T ss_pred             hhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeee
Confidence            445566777889999999999999999999985 46788999988653  233356688899999999999999999988


Q ss_pred             ccC------CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe
Q 047215          579 DEQ------NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV  652 (851)
Q Consensus       579 ~~~------~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~  652 (851)
                      ...      ...+++++++ +++|.+++...   .+++..+..++.|+++||+|||+   .+++||||||+||++++++.
T Consensus        86 ~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~  158 (345)
T cd07877          86 TPARSLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCE  158 (345)
T ss_pred             eecccccccccEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCCCC
Confidence            533      3468888876 77998887543   48899999999999999999995   89999999999999999999


Q ss_pred             EEEeeccccccCCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHH-
Q 047215          653 AKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADW-  730 (851)
Q Consensus       653 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~-  730 (851)
                      +||+|||+++....     ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.............. 
T Consensus       159 ~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~  233 (345)
T cd07877         159 LKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL  233 (345)
T ss_pred             EEEecccccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            99999999875322     1233467889999998866 5789999999999999999999998865432211100000 


Q ss_pred             --------HHHHhhh------cccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          731 --------AMKWQKQ------RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       731 --------~~~~~~~------~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                              .......      ..+..+...... .........+.+++.+||+.||.+||++.+++.|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         234 VGTPGAELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             hCCCCHHHHhhcccHhHHHHHHHhcccCCcchh-hhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence                    0000000      000000000000 0011234568899999999999999999999999

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-32  Score=325.71  Aligned_cols=265  Identities=25%  Similarity=0.441  Sum_probs=209.6

Q ss_pred             HHHHhcCCceeeeeeeecceEEEEEEEcC--------cceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEE
Q 047215          508 IRVATNNFDESLMIGVGGFGKVFKGEIED--------CTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGF  577 (851)
Q Consensus       508 l~~~t~~f~~~~~LG~G~fG~Vykg~~~~--------~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~  577 (851)
                      ++...++..+.+.||+|.||.|++|....        ...||||.++.. ...+.+.+..|+++|+.+ +||||+.++|+
T Consensus       291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~  370 (609)
T KOG0200|consen  291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA  370 (609)
T ss_pred             eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence            34444555566689999999999997531        346899998765 445678899999999999 69999999999


Q ss_pred             EccCCcEEEEEEecCCcchhhhccCCC------C--------CCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCC
Q 047215          578 CDEQNEMILVYEYMANGTLRSHLFGSD------L--------PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT  643 (851)
Q Consensus       578 ~~~~~~~~lV~Ey~~~gsL~~~L~~~~------~--------~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~  643 (851)
                      |..++..++|+||+.+|+|.++|+.++      .        ..++..+++.++.|||.||+||++   .++|||||.++
T Consensus       371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaR  447 (609)
T KOG0200|consen  371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAAR  447 (609)
T ss_pred             eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhh
Confidence            999999999999999999999997654      1        138889999999999999999995   88999999999


Q ss_pred             CeEEcCCCeEEEeeccccccCCCCCcccccc-ccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCc
Q 047215          644 NILLDENFVAKMSDFGLSKTGPSMEHTHVST-AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPK  722 (851)
Q Consensus       644 NILld~~~~~kl~DFGla~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~  722 (851)
                      |||+.++..+||+|||+++............ ...-+..|||||.+....|+.|+|||||||+||||++...++.+..+.
T Consensus       448 NVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~  527 (609)
T KOG0200|consen  448 NVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP  527 (609)
T ss_pred             hEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc
Confidence            9999999999999999999755443332221 111345799999999999999999999999999999965543333221


Q ss_pred             chhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          723 DQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       723 ~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                      . ..+.+    +.+         +..+...|..|..++.++++.||+.+|++||++.++.+.++..+
T Consensus       528 ~-~~l~~----~l~---------~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l  580 (609)
T KOG0200|consen  528 T-EELLE----FLK---------EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL  580 (609)
T ss_pred             H-HHHHH----HHh---------cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence            1 11111    111         22233446677888999999999999999999999999998753

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=9.5e-33  Score=302.58  Aligned_cols=258  Identities=22%  Similarity=0.267  Sum_probs=191.6

Q ss_pred             eeeecceEEEEEEEcCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcchhh
Q 047215          521 IGVGGFGKVFKGEIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS  598 (851)
Q Consensus       521 LG~G~fG~Vykg~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~~  598 (851)
                      +|.|+++.||++.. +++.+|+|++...  .......+.+|++++++++||||+++++++..++..+++|||+++|+|.+
T Consensus        10 ~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   88 (314)
T cd08216          10 FEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCED   88 (314)
T ss_pred             hcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHH
Confidence            44445555555554 5788999987654  44556789999999999999999999999999999999999999999999


Q ss_pred             hccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc-----cccc
Q 047215          599 HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH-----THVS  673 (851)
Q Consensus       599 ~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~-----~~~~  673 (851)
                      ++.......+++..+..++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||.+........     ....
T Consensus        89 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~  165 (314)
T cd08216          89 LLKTHFPEGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFP  165 (314)
T ss_pred             HHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccc
Confidence            9976544568899999999999999999995   8999999999999999999999999998865322111     1112


Q ss_pred             cccccCCcccCcccccc--cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh-----------hccc
Q 047215          674 TAVKGSFGYLDPEYFWR--QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK-----------QRSL  740 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~--~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~-----------~~~~  740 (851)
                      ....++..|+|||++..  ..++.++|||||||++|||++|+.||........  +.+.......           ....
T Consensus       166 ~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  243 (314)
T cd08216         166 KSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM--LLEKVRGTVPCLLDKSTYPLYEDSM  243 (314)
T ss_pred             ccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhccCccccccCchhhhcCCc
Confidence            33457788999999875  4588999999999999999999999875432211  1110000000           0000


Q ss_pred             cc----ccCccC----CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 KS----IIDPHL----KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 ~~----i~d~~l----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..    ..++..    ...........+.+++.+||+.||++|||++++++|
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         244 SQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             CcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence            00    000000    011122344678899999999999999999999999

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=5.7e-33  Score=306.09  Aligned_cols=249  Identities=24%  Similarity=0.318  Sum_probs=208.7

Q ss_pred             HhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      ....|.+.+.||+|.|+.|..|+. ..+..||||.+.+.  +......+.+|+++|+.|+|||||+++.+.+....+|+|
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV  133 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV  133 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence            346788899999999999999986 45788999998775  333345688999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+.+|.++++|....  .+.+.....++.|+.++++|||+   +.|||||||++||||+.+..+||+|||++....  
T Consensus       134 ~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~--  206 (596)
T KOG0586|consen  134 MEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFD--  206 (596)
T ss_pred             EEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeec--
Confidence            99999999999996654  46668889999999999999995   999999999999999999999999999987633  


Q ss_pred             CccccccccccCCcccCcccccccCC-CchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                       ......+.+|++.|.|||++.+..| .+++|+||+|++||.|++|..||++..-.+                   +-++
T Consensus       207 -~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~-------------------Lr~r  266 (596)
T KOG0586|consen  207 -YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE-------------------LRPR  266 (596)
T ss_pred             -ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc-------------------ccch
Confidence             4445677899999999999998766 579999999999999999999998643221                   1111


Q ss_pred             cCCC--CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          747 HLKG--NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       747 ~l~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      .+.+  .++.....++.++++++|..+|.+|++++++.+|-+
T Consensus       267 vl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W  308 (596)
T KOG0586|consen  267 VLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRW  308 (596)
T ss_pred             heeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhcc
Confidence            1211  233445566889999999999999999999999944

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.1e-32  Score=289.97  Aligned_cols=242  Identities=23%  Similarity=0.286  Sum_probs=188.7

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCCCh---hhHHHHHHHHHHH-HhcCCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE---QGLAEFETEIEML-SKLRHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~---~~~~~~~~Ei~~l-~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      +.||+|+||.||+|... +++.+|+|.+.....   .....+..|..++ ...+|||++++++++..++..++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            46899999999999864 578899998865432   2223445555544 455899999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      ++|.+++...  ..+++..+..++.|++.||.|||+   .+++||||+|+||+++.++.+||+|||+++....      .
T Consensus        82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~  150 (260)
T cd05611          82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------N  150 (260)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccc------c
Confidence            9999998543  358899999999999999999995   8999999999999999999999999999875322      2


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS  753 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  753 (851)
                      ....++..|++||.+.+..++.++||||||++++||++|..|+.......      ...... ....      .......
T Consensus       151 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~~~-~~~~------~~~~~~~  217 (260)
T cd05611         151 KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA------VFDNIL-SRRI------NWPEEVK  217 (260)
T ss_pred             ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHH-hccc------CCCCccc
Confidence            23457889999999988889999999999999999999999986543221      111110 0000      0111122


Q ss_pred             hhHHHHHHHHHHHhcccCCCCCCCH---HHHHHH
Q 047215          754 PESLEKFGEIAEKCLDDEGKNRPTM---GEVLWH  784 (851)
Q Consensus       754 ~~~~~~l~~l~~~Cl~~dP~~RPt~---~evl~~  784 (851)
                      ..++..+.+++.+||+.+|++||++   +|++.|
T Consensus       218 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~  251 (260)
T cd05611         218 EFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH  251 (260)
T ss_pred             ccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence            3456779999999999999999955   677777

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=2.5e-32  Score=302.30  Aligned_cols=270  Identities=20%  Similarity=0.269  Sum_probs=198.9

Q ss_pred             cCCce-eeeeeeecceEEEEEEEc-CcceeEEeecCCCChhh--------------HHHHHHHHHHHHhcCCcceeeEEE
Q 047215          513 NNFDE-SLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQG--------------LAEFETEIEMLSKLRHRHLVSLIG  576 (851)
Q Consensus       513 ~~f~~-~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~--------------~~~~~~Ei~~l~~l~HpnIv~l~g  576 (851)
                      ++|.. .+.||+|+||.||+|... .++.+|+|.........              ...+.+|++++++++||||+++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            34433 457999999999999864 57889999876432211              124778999999999999999999


Q ss_pred             EEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEe
Q 047215          577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMS  656 (851)
Q Consensus       577 ~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~  656 (851)
                      ++..++..++||||++ |+|.+++..  ...+++.....++.|++.||+|||+   .+++||||||+||+++.++.+||+
T Consensus        88 ~~~~~~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~kl~  161 (335)
T PTZ00024         88 VYVEGDFINLVMDIMA-SDLKKVVDR--KIRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICKIA  161 (335)
T ss_pred             EEecCCcEEEEEeccc-cCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCEEEC
Confidence            9999999999999997 689888854  3458899999999999999999994   899999999999999999999999


Q ss_pred             eccccccCCCCC------------ccccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcc
Q 047215          657 DFGLSKTGPSME------------HTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKD  723 (851)
Q Consensus       657 DFGla~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~  723 (851)
                      |||+++......            .........++..|+|||++.+. .++.++|||||||++|||++|+.|+....+.+
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~  241 (335)
T PTZ00024        162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID  241 (335)
T ss_pred             CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            999987543100            01111233468889999998764 47999999999999999999999887554322


Q ss_pred             hhcHHHHHHHHhhhcc---cccc--------cCccCC---CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          724 QINLADWAMKWQKQRS---LKSI--------IDPHLK---GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       724 ~~~l~~~~~~~~~~~~---~~~i--------~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                      ..   ...........   ....        ......   .......+..+.+++.+||+.+|++|||++|++.|     
T Consensus       242 ~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~-----  313 (335)
T PTZ00024        242 QL---GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH-----  313 (335)
T ss_pred             HH---HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC-----
Confidence            11   11111100000   0000        000000   00112335678899999999999999999999999     


Q ss_pred             HhhhhhcccCC
Q 047215          790 QLHEAWMRTDD  800 (851)
Q Consensus       790 ~~~~~w~~~~~  800 (851)
                          +|++...
T Consensus       314 ----~~~~~~~  320 (335)
T PTZ00024        314 ----EYFKSDP  320 (335)
T ss_pred             ----cccCCCC
Confidence                8887543

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=1e-32  Score=296.32  Aligned_cols=250  Identities=24%  Similarity=0.360  Sum_probs=203.9

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~lV  587 (851)
                      ++|...+.||+|+||.||+|... +++.+++|.....   .......+..|++++++++ ||||+++++++..++..++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            46888899999999999999875 6788999987652   2344567889999999998 99999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+++++|.+++...  ..+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++......
T Consensus        81 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~  155 (280)
T cd05581          81 LEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN  155 (280)
T ss_pred             EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence            9999999999998554  369999999999999999999995   89999999999999999999999999998754322


Q ss_pred             Cc------------------cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHH
Q 047215          668 EH------------------THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD  729 (851)
Q Consensus       668 ~~------------------~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~  729 (851)
                      ..                  ........++..|+|||.+....++.++||||||++++++++|+.|+.......   .. 
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~-  231 (280)
T cd05581         156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL---TF-  231 (280)
T ss_pred             cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH---HH-
Confidence            11                  012233457889999999988889999999999999999999999987543111   00 


Q ss_pred             HHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCH----HHHHHH
Q 047215          730 WAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTM----GEVLWH  784 (851)
Q Consensus       730 ~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~----~evl~~  784 (851)
                        ...         .  .....++...++.+.+++.+||+.+|.+||++    +++++|
T Consensus       232 --~~~---------~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~  277 (280)
T cd05581         232 --QKI---------L--KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH  277 (280)
T ss_pred             --HHH---------H--hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence              000         0  01112334446678999999999999999999    999988

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=3.3e-32  Score=294.80  Aligned_cols=252  Identities=25%  Similarity=0.329  Sum_probs=198.3

Q ss_pred             CCceeeeeeeecceEEEEEEE----cCcceeEEeecCCCC----hhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcE
Q 047215          514 NFDESLMIGVGGFGKVFKGEI----EDCTLAAIKRANPQS----EQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~----~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~  584 (851)
                      +|+..+.||+|+||.||+++.    .++..+|+|++....    ....+.+.+|+.+++++ +|+||+++++++..+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            467788999999999999986    367889999876532    22346688899999999 599999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ++|+||+++++|.+++...  .++++.++..++.|+++||.|||+   .+++||||||+|||++.++.+||+|||+++..
T Consensus        81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  155 (290)
T cd05613          81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEF  155 (290)
T ss_pred             EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence            9999999999999998543  457889999999999999999994   89999999999999999999999999998764


Q ss_pred             CCCCccccccccccCCcccCcccccc--cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          665 PSMEHTHVSTAVKGSFGYLDPEYFWR--QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       665 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      .... ........|+..|+|||.+..  ..++.++||||||+++|+|++|+.|+......  ....+........     
T Consensus       156 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--~~~~~~~~~~~~~-----  227 (290)
T cd05613         156 HEDE-VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK--NSQAEISRRILKS-----  227 (290)
T ss_pred             cccc-ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc--ccHHHHHHHhhcc-----
Confidence            3211 112223568899999999875  35788999999999999999999998643221  1111111111100     


Q ss_pred             ccCccCCCCCChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       743 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                            ...++......+.+++.+||+.+|.+||     ++++++.|
T Consensus       228 ------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         228 ------EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             ------CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence                  0122344556789999999999999997     88999888

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=5.4e-32  Score=294.08  Aligned_cols=259  Identities=15%  Similarity=0.170  Sum_probs=182.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCc----ceeEEeecCCCChhhH-----------HHHHHHHHHHHhcCCcceeeEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDC----TLAAIKRANPQSEQGL-----------AEFETEIEMLSKLRHRHLVSLIG  576 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~----~~vavK~~~~~~~~~~-----------~~~~~Ei~~l~~l~HpnIv~l~g  576 (851)
                      .++|.+.++||+|+||.||+|...+.    ..+++|..........           .....+...+..++|+|++++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            36788999999999999999987543    4556665433222111           11223344556678999999999


Q ss_pred             EEccCC----cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe
Q 047215          577 FCDEQN----EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV  652 (851)
Q Consensus       577 ~~~~~~----~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~  652 (851)
                      ++....    ..++++|++.. ++.+.+...  ...++..+..++.|++.||+|||+   .+++||||||+|||++.++.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~~~  164 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNNR  164 (294)
T ss_pred             eeeEecCCceEEEEEEehhcc-CHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCc
Confidence            775443    34677776643 555555322  235678889999999999999995   89999999999999999999


Q ss_pred             EEEeeccccccCCCCCcc-----ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcH
Q 047215          653 AKMSDFGLSKTGPSMEHT-----HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL  727 (851)
Q Consensus       653 ~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l  727 (851)
                      +||+|||+++........     .......||+.|+|||++.+..++.++|||||||+|+||++|+.||.........  
T Consensus       165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~--  242 (294)
T PHA02882        165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL--  242 (294)
T ss_pred             EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH--
Confidence            999999999754321110     1122346999999999999999999999999999999999999999765322211  


Q ss_pred             HHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          728 ADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       728 ~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                      .....    .+....+..+.+.   .+.++..+.+++..|++.+|++||+++++++.|
T Consensus       243 ~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        243 IHAAK----CDFIKRLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHHhH----HHHHHHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            10000    0001111111111   123457799999999999999999999998765

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=4.4e-32  Score=299.47  Aligned_cols=265  Identities=23%  Similarity=0.313  Sum_probs=198.5

Q ss_pred             HHHHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc-CCc
Q 047215          508 IRVATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE-QNE  583 (851)
Q Consensus       508 l~~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~-~~~  583 (851)
                      +...+++|+..+.||+|+||.||++... ++..+++|++...  .....+.+..|++++++++||||+++.+++.. ...
T Consensus         5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   84 (328)
T cd07856           5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED   84 (328)
T ss_pred             eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence            3446789999999999999999999854 6788999987542  23345678899999999999999999998855 567


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .++++||+ +++|.+++...   ++++.....++.|+++||.|||+   .+++||||||+|||+++++.+||+|||++..
T Consensus        85 ~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~  157 (328)
T cd07856          85 IYFVTELL-GTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLARI  157 (328)
T ss_pred             EEEEeehh-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCccccccc
Confidence            89999998 46888887532   47788888999999999999995   8999999999999999999999999999875


Q ss_pred             CCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcH---------HHHHHH
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL---------ADWAMK  733 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l---------~~~~~~  733 (851)
                      ....     .....++..|+|||.+.+ ..++.++||||||++++||++|+.||...........         .+|...
T Consensus       158 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (328)
T cd07856         158 QDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT  232 (328)
T ss_pred             cCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            3221     123456889999998765 5789999999999999999999998865432111100         001110


Q ss_pred             HhhhcccccccCccCCCCCC-----hhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          734 WQKQRSLKSIIDPHLKGNYS-----PESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       734 ~~~~~~~~~i~d~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .........+..-......+     +..+..+.+++.+||+.+|++|||+++++.|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00000000000000011111     2345779999999999999999999999999

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=6.3e-32  Score=296.23  Aligned_cols=249  Identities=27%  Similarity=0.413  Sum_probs=196.3

Q ss_pred             CceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          515 FDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      |...+.||+|+||.||+|+.. .+..+++|++...   .......+.+|++++++++|||++++++++..+...++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            445567999999999999864 5678899987643   233446788999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +. |+|.+.+.... .++++.++..++.|++.+|.|||+   .+++||||||+||+++.++.+||+|||++.....    
T Consensus       103 ~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----  173 (313)
T cd06633         103 CL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----  173 (313)
T ss_pred             CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence            96 57777664432 468999999999999999999995   8999999999999999999999999999864221    


Q ss_pred             ccccccccCCcccCccccc---ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          671 HVSTAVKGSFGYLDPEYFW---RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~---~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                        .....|+..|+|||++.   ...++.++|||||||++|||++|+.|+........      ....... ..     +.
T Consensus       174 --~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~------~~~~~~~-~~-----~~  239 (313)
T cd06633         174 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQN-DS-----PT  239 (313)
T ss_pred             --CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH------HHHHHhc-CC-----CC
Confidence              12346888999999984   45688999999999999999999998865432211      1111100 00     11


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      .   .....+..+.+++.+||+.+|.+||++.+++.|         +|++.
T Consensus       240 ~---~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~---------~~~~~  278 (313)
T cd06633         240 L---QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH---------DFVRR  278 (313)
T ss_pred             C---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC---------cccCC
Confidence            1   112234568999999999999999999999999         88764

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=2.9e-32  Score=301.41  Aligned_cols=264  Identities=23%  Similarity=0.285  Sum_probs=193.2

Q ss_pred             CCceeeeeeeecceEEEEEEEcC---cceeEEeecCCC--ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEcc----CCc
Q 047215          514 NFDESLMIGVGGFGKVFKGEIED---CTLAAIKRANPQ--SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDE----QNE  583 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~~---~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~----~~~  583 (851)
                      +|+..+.||+|+||.||+++...   +..+|+|++...  .....+.+.+|+.+++++ +||||+++++.+..    ...
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            47788899999999999998653   568899987643  223345678899999999 59999999997532    245


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .++++||+. ++|.+.+..  ...+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++.
T Consensus        81 ~~~~~e~~~-~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a~~  154 (332)
T cd07857          81 LYLYEELME-ADLHQIIRS--GQPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLARG  154 (332)
T ss_pred             EEEEEeccc-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence            788899886 588888844  3468899999999999999999995   8999999999999999999999999999975


Q ss_pred             CCCCCc--cccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHH---------HHH
Q 047215          664 GPSMEH--THVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLA---------DWA  731 (851)
Q Consensus       664 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~---------~~~  731 (851)
                      ......  ........|+..|+|||.+.+ ..++.++|||||||++++|++|+.||............         ++.
T Consensus       155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  234 (332)
T cd07857         155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETL  234 (332)
T ss_pred             cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            432111  111233568999999998765 57899999999999999999999988754322111000         000


Q ss_pred             HHHhhhc------ccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          732 MKWQKQR------SLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       732 ~~~~~~~------~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..+....      .........+ ....+.....+.+++.+||+.+|.+|||+.+++.|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~  292 (332)
T cd07857         235 SRIGSPKAQNYIRSLPNIPKKPF-ESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH  292 (332)
T ss_pred             HhhhhhhHHHHHHhccccCCcch-HhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            0000000      0000000000 01112235678999999999999999999999999

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=2.7e-32  Score=298.44  Aligned_cols=245  Identities=29%  Similarity=0.407  Sum_probs=193.5

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .|+..+.||+|+||.||+|+.. ++..+++|.+...   ......++.+|++++++++|+|++++++++..+...++|||
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence            3555678999999999999864 5677889887532   33445678899999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+. |+|.+.+.... .++++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++.....   
T Consensus        96 ~~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~---  167 (308)
T cd06634          96 YCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---  167 (308)
T ss_pred             ccC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeecC---
Confidence            997 57777764332 458899999999999999999995   8999999999999999999999999999875322   


Q ss_pred             cccccccccCCcccCccccc---ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          670 THVSTAVKGSFGYLDPEYFW---RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                         .....++..|+|||.+.   ...++.++|||||||++|||++|+.|+........      ...... ..     .+
T Consensus       168 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------~~~~~~-~~-----~~  232 (308)
T cd06634         168 ---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQ-NE-----SP  232 (308)
T ss_pred             ---cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH------HHHHhh-cC-----CC
Confidence               12345788999999974   35688899999999999999999998765322111      111100 00     01


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..   .....+..+.+++.+||+.+|.+||++++++.|
T Consensus       233 ~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         233 AL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (308)
T ss_pred             Cc---CcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence            11   122345668999999999999999999999999

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=1.1e-32  Score=321.42  Aligned_cols=252  Identities=27%  Similarity=0.407  Sum_probs=190.8

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC--------
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ--------  581 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--------  581 (851)
                      .++|+..++||+||||.|||++.+ ||..+|||++... +........+|+.+|++|+|||||+++..+.+.        
T Consensus       478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e  557 (1351)
T KOG1035|consen  478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE  557 (1351)
T ss_pred             hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence            467888889999999999999965 7899999998765 445556788999999999999999997532110        


Q ss_pred             --------------------------------------------------------------------------------
Q 047215          582 --------------------------------------------------------------------------------  581 (851)
Q Consensus       582 --------------------------------------------------------------------------------  581 (851)
                                                                                                      
T Consensus       558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e  637 (1351)
T KOG1035|consen  558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE  637 (1351)
T ss_pred             ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence                                                                                            


Q ss_pred             -------------------------------CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcC
Q 047215          582 -------------------------------NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG  630 (851)
Q Consensus       582 -------------------------------~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~  630 (851)
                                                     ..+||-||||+.-+|++++..+.... .....++++.+|++||.|+|  
T Consensus       638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH--  714 (1351)
T KOG1035|consen  638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIH--  714 (1351)
T ss_pred             CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHH--
Confidence                                           02578899999988888885544221 45678899999999999999  


Q ss_pred             CCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC----------------CCCccccccccccCCcccCccccccc---
Q 047215          631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP----------------SMEHTHVSTAVKGSFGYLDPEYFWRQ---  691 (851)
Q Consensus       631 ~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~----------------~~~~~~~~~~~~gt~~y~aPE~~~~~---  691 (851)
                       +.+||||||||.||+||+...|||+|||+|....                ........+...||.-|+|||.+.+.   
T Consensus       715 -~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~  793 (1351)
T KOG1035|consen  715 -DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN  793 (1351)
T ss_pred             -hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence             4899999999999999999999999999997611                00111134567899999999999755   


Q ss_pred             CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC--CCCChhHHHHHHHHHHHhcc
Q 047215          692 QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK--GNYSPESLEKFGEIAEKCLD  769 (851)
Q Consensus       692 ~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~--~~~~~~~~~~l~~l~~~Cl~  769 (851)
                      +|+.|+|+||+||||+||+.   ||...++.        +.-+.   .+.   ++.+.  ..+..+..+.-..+++++++
T Consensus       794 ~Yn~KiDmYSLGIVlFEM~y---PF~TsMER--------a~iL~---~LR---~g~iP~~~~f~~~~~~~e~slI~~Ll~  856 (1351)
T KOG1035|consen  794 KYNSKIDMYSLGIVLFEMLY---PFGTSMER--------ASILT---NLR---KGSIPEPADFFDPEHPEEASLIRWLLS  856 (1351)
T ss_pred             cccchhhhHHHHHHHHHHhc---cCCchHHH--------HHHHH---hcc---cCCCCCCcccccccchHHHHHHHHHhc
Confidence            49999999999999999983   34433211        11111   111   11221  22333444456789999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 047215          770 DEGKNRPTMGEVLWH  784 (851)
Q Consensus       770 ~dP~~RPt~~evl~~  784 (851)
                      .||.+|||+.|+|.+
T Consensus       857 hdP~kRPtA~eLL~s  871 (1351)
T KOG1035|consen  857 HDPSKRPTATELLNS  871 (1351)
T ss_pred             CCCccCCCHHHHhhc
Confidence            999999999999987

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=1.4e-32  Score=305.32  Aligned_cols=270  Identities=21%  Similarity=0.290  Sum_probs=199.0

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC----------
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ----------  581 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~----------  581 (851)
                      .+|...+.||+|+||.||+|... .+..+++|++........+.+.+|++++++++||||+++++++...          
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            67889999999999999999864 5778999988766666667889999999999999999999876543          


Q ss_pred             ----CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc-CCCeEEEe
Q 047215          582 ----NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMS  656 (851)
Q Consensus       582 ----~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld-~~~~~kl~  656 (851)
                          ...++||||++ ++|.+++..   ..+++..+..++.|++.||.|||+   .+++||||||+||+++ +++.+||+
T Consensus        85 ~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~kl~  157 (342)
T cd07854          85 LTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVLKIG  157 (342)
T ss_pred             ccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceEEEC
Confidence                35789999997 588887743   358899999999999999999994   8999999999999997 56689999


Q ss_pred             eccccccCCCCCc-cccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHH---
Q 047215          657 DFGLSKTGPSMEH-THVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA---  731 (851)
Q Consensus       657 DFGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~---  731 (851)
                      |||+++....... ........++..|+|||.+.. ..++.++|||||||++|||++|+.||....+.+........   
T Consensus       158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~  237 (342)
T cd07854         158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPV  237 (342)
T ss_pred             CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence            9999875322111 111123357889999998754 56889999999999999999999999754332211100000   


Q ss_pred             ------HHHhh-h-cccc-cccCccC-CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          732 ------MKWQK-Q-RSLK-SIIDPHL-KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       732 ------~~~~~-~-~~~~-~i~d~~l-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                            ..... . .... ....+.. .....+.....+.+++.+||+.||.+|||++|++.|         +|++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h---------~~~~~  305 (342)
T cd07854         238 VREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH---------PYMSC  305 (342)
T ss_pred             CChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC---------Ccccc
Confidence                  00000 0 0000 0000000 000112344668899999999999999999999999         88864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.98  E-value=5.3e-32  Score=295.79  Aligned_cols=268  Identities=25%  Similarity=0.311  Sum_probs=194.7

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh--hhHHHHHHHHHHHHhcCCcceeeEEEEEccC-------
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE--QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ-------  581 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~-------  581 (851)
                      .++|+..++||+|+||.||+|... +++.+++|++.....  .....+.+|++++++++||||+++++++...       
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            478999999999999999999865 567889998754322  2234677899999999999999999987433       


Q ss_pred             -CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccc
Q 047215          582 -NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL  660 (851)
Q Consensus       582 -~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGl  660 (851)
                       ..+++|+||+.+ +|...+... ...+++.++..++.|+++||.|||+   .+++||||||+||++++++.+||+|||+
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~  161 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFGL  161 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcCcc
Confidence             346999999975 666666443 3468999999999999999999995   8999999999999999999999999999


Q ss_pred             cccCCCCCcc---------ccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHH
Q 047215          661 SKTGPSMEHT---------HVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADW  730 (851)
Q Consensus       661 a~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~  730 (851)
                      ++........         .......+++.|+|||.+.+ ..++.++|||||||++|||++|+.|+..............
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~  241 (311)
T cd07866         162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFK  241 (311)
T ss_pred             chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            8753321111         11233457888999998865 4589999999999999999999999875443322111100


Q ss_pred             HHH------Hhhhccccccc----CccCCCC---CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          731 AMK------WQKQRSLKSII----DPHLKGN---YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       731 ~~~------~~~~~~~~~i~----d~~l~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ...      +.....+....    .......   ......+.+.+++.+||+.+|.+|||+.|++.|
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~  308 (311)
T cd07866         242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH  308 (311)
T ss_pred             HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence            000      00000000000    0000000   001223568899999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.98  E-value=1.3e-32  Score=306.75  Aligned_cols=270  Identities=27%  Similarity=0.384  Sum_probs=208.2

Q ss_pred             ceeeeeeeecceEEEEEEE-cCcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC------CcEEEE
Q 047215          516 DESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ------NEMILV  587 (851)
Q Consensus       516 ~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~------~~~~lV  587 (851)
                      ...+.||+|+||.||+|+. ..|..+|||.+... .....+...+|+++|++|+|||||++++.-+..      ....+|
T Consensus        16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv   95 (732)
T KOG4250|consen   16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV   95 (732)
T ss_pred             eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence            3445799999999999994 67899999998875 334456678899999999999999999986554      367999


Q ss_pred             EEecCCcchhhhccCC-CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE--cCCC--eEEEeeccccc
Q 047215          588 YEYMANGTLRSHLFGS-DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL--DENF--VAKMSDFGLSK  662 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~-~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl--d~~~--~~kl~DFGla~  662 (851)
                      ||||.+|||...|... +...|++.+.+.++.+++.||.|||   +++|+||||||.||++  ..+|  .-||+|||.|+
T Consensus        96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar  172 (732)
T KOG4250|consen   96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR  172 (732)
T ss_pred             EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence            9999999999999654 3456999999999999999999999   5999999999999999  2333  57999999999


Q ss_pred             cCCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK  741 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  741 (851)
                      .....   .....+.||..|++||.... ..|+..+|.|||||++||.+||..||.+........-..|...........
T Consensus       173 el~d~---s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~  249 (732)
T KOG4250|consen  173 ELDDN---SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVA  249 (732)
T ss_pred             cCCCC---CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCcee
Confidence            75432   35677889999999999984 889999999999999999999999998865543222233332222221111


Q ss_pred             cccCccC------------CCCCChhHHHHHHHHHHHhcccCCCCCC--CHHHHHHHHHHHHHh
Q 047215          742 SIIDPHL------------KGNYSPESLEKFGEIAEKCLDDEGKNRP--TMGEVLWHLEYVLQL  791 (851)
Q Consensus       742 ~i~d~~l------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RP--t~~evl~~L~~~~~~  791 (851)
                      -..++..            ....+......+-+.+..+|..+|++|-  ...+....+..+++.
T Consensus       250 i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~  313 (732)
T KOG4250|consen  250 IGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL  313 (732)
T ss_pred             EeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence            1111111            1223344556677888899999999998  777777777777654

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.98  E-value=3.7e-32  Score=308.33  Aligned_cols=261  Identities=28%  Similarity=0.387  Sum_probs=216.3

Q ss_pred             cCHHHHHHHhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEc-
Q 047215          503 FTLAEIRVATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCD-  579 (851)
Q Consensus       503 ~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~-  579 (851)
                      ..++.+...++-|++.+.||.|.+|.||+++. ++++.+|+|+...... ..++...|.++|+.+ +|||++.++|++. 
T Consensus         9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k   87 (953)
T KOG0587|consen    9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIK   87 (953)
T ss_pred             cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence            44556666788899999999999999999985 5678889998776543 346778899999988 6999999999983 


Q ss_pred             ----cCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEE
Q 047215          580 ----EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM  655 (851)
Q Consensus       580 ----~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl  655 (851)
                          .++++|||||||.+|+..|++++.....+.|..+..|++.+++||.+||   +..+||||||-.||||+.++.+||
T Consensus        88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKL  164 (953)
T KOG0587|consen   88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKL  164 (953)
T ss_pred             ecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEE
Confidence                4579999999999999999998877788999999999999999999999   588999999999999999999999


Q ss_pred             eeccccccCCCCCccccccccccCCcccCccccccc-----CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHH
Q 047215          656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ-----QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADW  730 (851)
Q Consensus       656 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~  730 (851)
                      +|||++.....  ......+..||+.|||||++...     .|+..+|+||||++..||.-|.+|+.+..|...      
T Consensus       165 vDFGvSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra------  236 (953)
T KOG0587|consen  165 VDFGVSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA------  236 (953)
T ss_pred             eeeeeeeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh------
Confidence            99999876332  22234556799999999999743     477899999999999999999999887665322      


Q ss_pred             HHHHhhhcccccc-cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          731 AMKWQKQRSLKSI-IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       731 ~~~~~~~~~~~~i-~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                               +..| -.|...-.-+..-.+++-+++..||.+|..+||++.++|+|
T Consensus       237 ---------LF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  237 ---------LFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             ---------hccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence                     1111 12222223456677889999999999999999999999999

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.98  E-value=7.7e-33  Score=279.13  Aligned_cols=274  Identities=23%  Similarity=0.309  Sum_probs=211.2

Q ss_pred             hcCCcee-eeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEc----cCCcE
Q 047215          512 TNNFDES-LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCD----EQNEM  584 (851)
Q Consensus       512 t~~f~~~-~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~----~~~~~  584 (851)
                      +++|.+. ++||-|-.|.|-....+ .+...|+|++...     ...++|+++.-+. .|||||+++++++    ....+
T Consensus        60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL  134 (400)
T KOG0604|consen   60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL  134 (400)
T ss_pred             hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence            4455443 57999999999988764 4667899988653     3347788876655 5999999999874    34678


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc---CCCeEEEeecccc
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGLS  661 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld---~~~~~kl~DFGla  661 (851)
                      ++|||.|+||.|...++.+....++++++..|..||+.|+.|||+   .+|.||||||+|+|..   .|-.+||+|||+|
T Consensus       135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA  211 (400)
T KOG0604|consen  135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA  211 (400)
T ss_pred             EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEecccccc
Confidence            999999999999999998888899999999999999999999995   9999999999999995   5668999999999


Q ss_pred             ccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK  741 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  741 (851)
                      +...   ......+.+-|+.|.|||++...+|+..+|+||+||++|-|+||.+||........ +          .+...
T Consensus       212 K~t~---~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai-s----------pgMk~  277 (400)
T KOG0604|consen  212 KETQ---EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-S----------PGMKR  277 (400)
T ss_pred             cccC---CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC-C----------hhHHh
Confidence            8632   12334567889999999999999999999999999999999999999986543211 0          11111


Q ss_pred             cccCccC--CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCCC--CCCcccchhhhhhhh
Q 047215          742 SIIDPHL--KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDR--QNSFSSSQALGEFAE  816 (851)
Q Consensus       742 ~i~d~~l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~~--~~~~~~~~~~~~~~~  816 (851)
                      +|....+  ..+-...+++..+++++.+|..+|++|.|++|+++|         +|......  +.....+..+++..+
T Consensus       278 rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h---------pwi~~~~~vp~tpl~t~~~l~~a~e  347 (400)
T KOG0604|consen  278 RIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH---------PWINQYEAVPQTPLSTSRMLKEAVE  347 (400)
T ss_pred             HhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC---------chhcccccCCCCCchhhhhcchhhh
Confidence            1211111  111124567889999999999999999999999999         88764432  333344444444443

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.98  E-value=4.6e-32  Score=301.27  Aligned_cols=261  Identities=23%  Similarity=0.335  Sum_probs=197.2

Q ss_pred             HhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC-----
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN-----  582 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~-----  582 (851)
                      ..++|+..+.||+|+||.||++.. .++..+|+|+....  .......+.+|+.++++++||||+++++++..+.     
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            467899999999999999999985 46788999987543  2333456889999999999999999999986553     


Q ss_pred             -cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccc
Q 047215          583 -EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       583 -~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla  661 (851)
                       ..++||||+ +++|.+++..   ..+++..+..++.|+++||.|||+   .+|+||||||+||+++.++.+||+|||++
T Consensus        93 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~dfg~~  165 (343)
T cd07880          93 HDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLA  165 (343)
T ss_pred             ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccc
Confidence             458999999 6789888753   358899999999999999999994   89999999999999999999999999998


Q ss_pred             ccCCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhc-H--------HHHH
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN-L--------ADWA  731 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~-l--------~~~~  731 (851)
                      +.....     .....+++.|+|||.+.+ ..++.++|+||||+++++|++|+.||.......... .        .++.
T Consensus       166 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  240 (343)
T cd07880         166 RQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFV  240 (343)
T ss_pred             cccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence            763321     123457889999999875 468999999999999999999999987543211100 0        0011


Q ss_pred             HHHhhhc------ccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          732 MKWQKQR------SLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       732 ~~~~~~~------~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .......      .+.......+ ....+.+...+.+++.+||+.||.+|||+.+++.|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~  298 (343)
T cd07880         241 QKLQSEDAKNYVKKLPRFRKKDF-RSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH  298 (343)
T ss_pred             HhhcchhHHHHHHhccccCcchH-HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            1000000      0000000000 01123445568899999999999999999999999

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.98  E-value=2.6e-32  Score=290.53  Aligned_cols=249  Identities=24%  Similarity=0.359  Sum_probs=193.6

Q ss_pred             CCceeeeeeeecceEEEEEEEcCc-ceeEEeecC---CC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIEDC-TLAAIKRAN---PQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~~~-~~vavK~~~---~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      +|.+.++||+|+||.||++..... ...++|...   ..  .......+..|+.++++++||||+++++++......++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            467788999999999999986432 233333332   21  223344577899999999999999999999999999999


Q ss_pred             EEecCCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          588 YEYMANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      +||+++++|.+++..  .....+++.++..++.|+++||.|||+   .+++|+||||+||+++. +.+||+|||+++...
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~  156 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM  156 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeecC
Confidence            999999999988853  234568999999999999999999994   89999999999999975 569999999987643


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ...  .......|+..|+|||.+.+..++.++|+||||+++|+|++|+.|+.....      ........         .
T Consensus       157 ~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~------~~~~~~~~---------~  219 (260)
T cd08222         157 GSC--DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF------LSVVLRIV---------E  219 (260)
T ss_pred             CCc--ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHH---------c
Confidence            221  122345678899999999888899999999999999999999998854321      11111111         0


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       ......+...+..+.+++.+||+.+|++||++.|+++|
T Consensus       220 -~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         220 -GPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             -CCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence             01112234556678999999999999999999999999

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.98  E-value=3.1e-32  Score=293.05  Aligned_cols=260  Identities=23%  Similarity=0.314  Sum_probs=198.4

Q ss_pred             CceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          515 FDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      |+..+.||+|++|.||+|+.. +++.+++|......  ....+.+..|+.++++++|||++++++++...+..++|+||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            455678999999999999876 47889999887653  334567889999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      + ++|.+++.... ..+++.++.+++.|++.||.|||+   .+++||||+|+||++++++.+||+|||+++.......  
T Consensus        81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--  153 (282)
T cd07829          81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR--  153 (282)
T ss_pred             C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--
Confidence            8 58999986543 468999999999999999999995   8999999999999999999999999999876432211  


Q ss_pred             cccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHh---------hhcccc
Q 047215          672 VSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ---------KQRSLK  741 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~---------~~~~~~  741 (851)
                      ......++..|+|||.+.+. .++.++|||||||+++||++|+.|+......+.   ........         ....+.
T Consensus       154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  230 (282)
T cd07829         154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ---LFKIFQILGTPTEESWPGVTKLP  230 (282)
T ss_pred             ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH---HHHHHHHhCCCcHHHHHhhcccc
Confidence            12233457789999998766 889999999999999999999988865432211   11111000         000000


Q ss_pred             --cccCccCCC----CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          742 --SIIDPHLKG----NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       742 --~i~d~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                        ...-+....    ...+.....+.+++.+||+.+|++||++++++.|
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  279 (282)
T cd07829         231 DYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH  279 (282)
T ss_pred             cccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence              000000000    0111235679999999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.98  E-value=1.2e-31  Score=290.11  Aligned_cols=252  Identities=25%  Similarity=0.326  Sum_probs=194.7

Q ss_pred             CCceeeeeeeecceEEEEEEE----cCcceeEEeecCCCC----hhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcE
Q 047215          514 NFDESLMIGVGGFGKVFKGEI----EDCTLAAIKRANPQS----EQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~----~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~  584 (851)
                      +|+..+.||+|++|.||+++.    .++..++||.+....    ......+.+|+.++.++ +||||+++++.+..+...
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            467788999999999999974    345778999876431    23345688999999999 699999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ++||||+++|+|.+++...  ..+++.++..++.|++++|.|||+   .+++||||||+||+++.++.++|+|||+++..
T Consensus        81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~  155 (288)
T cd05583          81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKEF  155 (288)
T ss_pred             EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence            9999999999999988543  458899999999999999999995   89999999999999999999999999998764


Q ss_pred             CCCCccccccccccCCcccCcccccccC--CCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          665 PSMEHTHVSTAVKGSFGYLDPEYFWRQQ--LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       665 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      .... ........|+..|+|||.+.+..  .+.++||||||++++||++|+.|+.......  ...+.......      
T Consensus       156 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~------  226 (288)
T cd05583         156 LAEE-EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN--SQSEISRRILK------  226 (288)
T ss_pred             cccc-ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc--hHHHHHHHHHc------
Confidence            3221 11223346889999999987654  7899999999999999999999986432211  11111111100      


Q ss_pred             ccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       743 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       ..+    ..+...+..+.+++.+||+.+|++|||+.++.+.
T Consensus       227 -~~~----~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~  263 (288)
T cd05583         227 -SKP----PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEI  263 (288)
T ss_pred             -cCC----CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHH
Confidence             011    1223344568899999999999999997655433

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.98  E-value=3.4e-32  Score=302.33  Aligned_cols=261  Identities=22%  Similarity=0.308  Sum_probs=197.1

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCc----
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE----  583 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~----  583 (851)
                      ..++|+..+.||+|++|.||+|+.. ++..+++|++...  .......+.+|+.++++++||||+++++++..++.    
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            3578999999999999999999875 5678899987643  23344667889999999999999999998765554    


Q ss_pred             --EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccc
Q 047215          584 --MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       584 --~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla  661 (851)
                        .++|+||+ +++|.+++..   ..+++.++..++.|+++||.|||+   .+++||||||+||+++.++.+||+|||++
T Consensus        93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~~  165 (343)
T cd07851          93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGLA  165 (343)
T ss_pred             ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEcccccc
Confidence              89999998 5699888854   358999999999999999999995   89999999999999999999999999998


Q ss_pred             ccCCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcH-H--------HHH
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL-A--------DWA  731 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l-~--------~~~  731 (851)
                      ......     .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||........... .        .+.
T Consensus       166 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~  240 (343)
T cd07851         166 RHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELL  240 (343)
T ss_pred             cccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Confidence            764221     233457889999999865 4688999999999999999999999865433211100 0        000


Q ss_pred             HHHhhhcccccccCc---cCCCC---CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          732 MKWQKQRSLKSIIDP---HLKGN---YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       732 ~~~~~~~~~~~i~d~---~l~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..+.... ....+..   .....   .....+..+.+++.+||+.+|.+|||+.+++.|
T Consensus       241 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h  298 (343)
T cd07851         241 QKISSES-ARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH  298 (343)
T ss_pred             hhccchh-HHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence            0000000 0000000   00000   011235678999999999999999999999999

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.98  E-value=6.8e-33  Score=296.30  Aligned_cols=245  Identities=21%  Similarity=0.313  Sum_probs=202.1

Q ss_pred             eeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCc
Q 047215          518 SLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANG  594 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~g  594 (851)
                      .++||.|.||+||-|.+ +.|+.||||.+.+.  ..++...+++|+.+|++++||.||.|-.-|+..+..+.|||-+. |
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-G  647 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-G  647 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-c
Confidence            46899999999999986 56889999988764  45556789999999999999999999999999999999999995 5


Q ss_pred             chhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc---CCCeEEEeeccccccCCCCCccc
Q 047215          595 TLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       595 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld---~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++.+++..+..++|++..-..++.||+.||.|||   .++|+|+||||+||||.   .--++||||||.||....   ..
T Consensus       648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE---ks  721 (888)
T KOG4236|consen  648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE---KS  721 (888)
T ss_pred             hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecch---hh
Confidence            6666666666788999999999999999999999   59999999999999995   345799999999998543   33


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      ....+.||+.|+|||+++.+.|...-|+||.||++|.-++|-.||+....-  .+.++         +-.-+..+.-   
T Consensus       722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI--ndQIQ---------NAaFMyPp~P---  787 (888)
T KOG4236|consen  722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI--NDQIQ---------NAAFMYPPNP---  787 (888)
T ss_pred             hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccch--hHHhh---------ccccccCCCc---
Confidence            456788999999999999999999999999999999999999999754221  11111         1111222222   


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       ..+......+|+...|+..-++|-|..+.+.|
T Consensus       788 -W~eis~~AidlIn~LLqVkm~kRysvdk~lsh  819 (888)
T KOG4236|consen  788 -WSEISPEAIDLINNLLQVKMRKRYSVDKSLSH  819 (888)
T ss_pred             -hhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence             23555668899999999999999999999999

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-32  Score=278.50  Aligned_cols=267  Identities=22%  Similarity=0.319  Sum_probs=206.2

Q ss_pred             HHHHHHHhcCCceeeeeeeecceEEEEEE-EcCcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCC
Q 047215          505 LAEIRVATNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQN  582 (851)
Q Consensus       505 ~~~l~~~t~~f~~~~~LG~G~fG~Vykg~-~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~  582 (851)
                      +.++..-|.     ++||+|+|+.|--+. +..+..+|||++.+..........+|++++.+. .|+||++|++|++++.
T Consensus        75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~  149 (463)
T KOG0607|consen   75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT  149 (463)
T ss_pred             HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence            344444443     369999999998875 678889999999988777788899999999999 5999999999999999


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCC---CeEEEeecc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN---FVAKMSDFG  659 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~---~~~kl~DFG  659 (851)
                      .+|||||-|.+|+|..+|+.+  ..+++.+..++..+||.||.+||   +++|.||||||+|||-...   .-+|||||.
T Consensus       150 ~FYLVfEKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfD  224 (463)
T KOG0607|consen  150 RFYLVFEKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFD  224 (463)
T ss_pred             eEEEEEecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeeccc
Confidence            999999999999999999654  46899999999999999999999   5999999999999998543   358999998


Q ss_pred             ccccCCC-----CCccccccccccCCcccCccccc-----ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcch-hcHH
Q 047215          660 LSKTGPS-----MEHTHVSTAVKGSFGYLDPEYFW-----RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ-INLA  728 (851)
Q Consensus       660 la~~~~~-----~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~-~~l~  728 (851)
                      |..-...     ...+....+.+|+..|||||+..     ...|+.++|.||||||||-||+|.+||.+.-..+- .+-.
T Consensus       225 LgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrG  304 (463)
T KOG0607|consen  225 LGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRG  304 (463)
T ss_pred             cccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCC
Confidence            8653211     11112234567999999999874     45789999999999999999999999986543221 0000


Q ss_pred             HHHHHHhhhcccccccCccCCCCCC----hhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          729 DWAMKWQKQRSLKSIIDPHLKGNYS----PESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       729 ~~~~~~~~~~~~~~i~d~~l~~~~~----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +-.+.+ +..-++.|-+..+  ++|    ...+...++++...|..++.+|.++.++++|
T Consensus       305 e~Cr~C-Q~~LFesIQEGkY--eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh  361 (463)
T KOG0607|consen  305 EVCRVC-QNKLFESIQEGKY--EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH  361 (463)
T ss_pred             CccHHH-HHHHHHHHhccCC--cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence            000000 1111222333222  233    3456778999999999999999999999999

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.97  E-value=6.3e-32  Score=273.53  Aligned_cols=268  Identities=22%  Similarity=0.268  Sum_probs=194.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC-----cceeEEeecCCCCh--hhHHHHHHHHHHHHhcCCcceeeEEEEEcc-CCcE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED-----CTLAAIKRANPQSE--QGLAEFETEIEMLSKLRHRHLVSLIGFCDE-QNEM  584 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~-----~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~-~~~~  584 (851)
                      ..|+.++.||+|.||.||||.-.+     .+.+|||+++....  .--....+|+.+++.++||||+.|..++.+ +...
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            467888899999999999995432     23679998876522  112346789999999999999999999866 8899


Q ss_pred             EEEEEecCCcchhhhccCC---CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCC----CeEEEee
Q 047215          585 ILVYEYMANGTLRSHLFGS---DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN----FVAKMSD  657 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~---~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~----~~~kl~D  657 (851)
                      +|++||.++ +|...++-+   ....++...+..|++||+.|++|||+   .=|+||||||.||||..+    |++||+|
T Consensus       104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaD  179 (438)
T KOG0666|consen  104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIAD  179 (438)
T ss_pred             EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeec
Confidence            999999998 777777432   23568888899999999999999995   779999999999999776    9999999


Q ss_pred             ccccccCCCCCccc-cccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcc------hhcHHH
Q 047215          658 FGLSKTGPSMEHTH-VSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD------QINLAD  729 (851)
Q Consensus       658 FGla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~------~~~l~~  729 (851)
                      ||++|.....-..- ....+.-|..|.|||.+.+ ..||.+.|||+.||++.||+|-.+.|......-      +.+..+
T Consensus       180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~  259 (438)
T KOG0666|consen  180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD  259 (438)
T ss_pred             ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence            99999754332221 2334567899999999886 579999999999999999999998886532211      111111


Q ss_pred             HHHHHhhhcccccccC----cc-----------CCCCCC--------hhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          730 WAMKWQKQRSLKSIID----PH-----------LKGNYS--------PESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       730 ~~~~~~~~~~~~~i~d----~~-----------l~~~~~--------~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ............++.+    |.           .....+        ..-++...+|+.++|..||.+|.|++++++|
T Consensus       260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh  337 (438)
T KOG0666|consen  260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH  337 (438)
T ss_pred             HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence            1111100000000000    00           000000        0011236789999999999999999999999

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=3.8e-33  Score=326.58  Aligned_cols=254  Identities=26%  Similarity=0.361  Sum_probs=203.1

Q ss_pred             HhcCCceeeeeeeecceEEEEEE-EcCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~-~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      .+-++.....||.|.||.||-|. .+.|...|+|.+...  .........+|+.++..++|||+|+++|+-.+.++.+|.
T Consensus      1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred             ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence            34556667789999999999997 467788899876543  345556788999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      ||||++|+|.+++...+  -+++.-......|++.|+.|||   ++|||||||||.||+|+.+|.+|++|||.|......
T Consensus      1313 MEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred             HHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCc
Confidence            99999999999985443  2445555667889999999999   599999999999999999999999999999764432


Q ss_pred             C--ccccccccccCCcccCccccccc---CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          668 E--HTHVSTAVKGSFGYLDPEYFWRQ---QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       668 ~--~~~~~~~~~gt~~y~aPE~~~~~---~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      .  .........||+.|||||++.+.   .-..++||||+|||.+||+||+.||.....       +|+..++-..    
T Consensus      1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn-------e~aIMy~V~~---- 1456 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN-------EWAIMYHVAA---- 1456 (1509)
T ss_pred             hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc-------hhHHHhHHhc----
Confidence            1  11122456799999999999754   355689999999999999999999975432       3444332111    


Q ss_pred             ccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       743 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                          .-.+.+|...+..-++++..||+.||+.|.++.|+++|
T Consensus      1457 ----gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1457 ----GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             ----cCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence                11234455677778999999999999999999999998

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.4e-32  Score=318.04  Aligned_cols=258  Identities=23%  Similarity=0.311  Sum_probs=211.7

Q ss_pred             HHHHHHHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc
Q 047215          505 LAEIRVATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE  580 (851)
Q Consensus       505 ~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~  580 (851)
                      ..+++...++|++.++||+|+||.|...+.+ .++++|+|++++.   .......|..|-.+|.--+.+-|++|+-.|.+
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            4567778899999999999999999999875 4678899998863   33445789999999999999999999999999


Q ss_pred             CCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccc
Q 047215          581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL  660 (851)
Q Consensus       581 ~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGl  660 (851)
                      +..+|||||||+||+|-.++....  ++++.-+...+..|..||+-||+   .|+|||||||.|||||..|.+||+|||.
T Consensus       147 ~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikLADFGs  221 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKLADFGS  221 (1317)
T ss_pred             ccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEeeccchh
Confidence            999999999999999999996554  67888888889999999999994   9999999999999999999999999998


Q ss_pred             cccCCCCCccccccccccCCcccCccccc----c-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHh
Q 047215          661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFW----R-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ  735 (851)
Q Consensus       661 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~  735 (851)
                      +..+.. +....+....|||.|++||+++    + +.|++.+|.||+||++|||+.|..||+..      ++++-.    
T Consensus       222 Clkm~~-dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad------slveTY----  290 (1317)
T KOG0612|consen  222 CLKMDA-DGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD------SLVETY----  290 (1317)
T ss_pred             HHhcCC-CCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH------HHHHHH----
Confidence            865443 3344456677999999999996    2 57999999999999999999999999753      222221    


Q ss_pred             hhcccccccCccCCCCCC--hhHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 047215          736 KQRSLKSIIDPHLKGNYS--PESLEKFGEIAEKCLDDEGKNRPT---MGEVLWH  784 (851)
Q Consensus       736 ~~~~~~~i~d~~l~~~~~--~~~~~~l~~l~~~Cl~~dP~~RPt---~~evl~~  784 (851)
                           ..|++..-.-.||  .++++..++||++.+. +|+.|..   ++++-.|
T Consensus       291 -----~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H  338 (1317)
T KOG0612|consen  291 -----GKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH  338 (1317)
T ss_pred             -----HHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence                 1222221111233  4567789999999776 6888887   9999999

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.5e-31  Score=282.43  Aligned_cols=240  Identities=26%  Similarity=0.341  Sum_probs=195.8

Q ss_pred             eeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcch
Q 047215          521 IGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL  596 (851)
Q Consensus       521 LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL  596 (851)
                      ||+|+||.||++... +++.+++|.+....   ......+..|++++++++||||+++++.+..++..++||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            689999999999875 47788999876542   23456889999999999999999999999999999999999999999


Q ss_pred             hhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccccccc
Q 047215          597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV  676 (851)
Q Consensus       597 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~  676 (851)
                      .+++...  ..+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++.......  ......
T Consensus        81 ~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~  153 (250)
T cd05123          81 FSHLSKE--GRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNTF  153 (250)
T ss_pred             HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccCC
Confidence            9998554  358999999999999999999995   999999999999999999999999999987643221  123345


Q ss_pred             ccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhH
Q 047215          677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPES  756 (851)
Q Consensus       677 ~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  756 (851)
                      .++..|++||.+.+...+.++|+||||+++|||++|+.|+.....   ...   ....         ...  ...++...
T Consensus       154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~---~~~~---------~~~--~~~~~~~~  216 (250)
T cd05123         154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEI---YEKI---------LKD--PLRFPEFL  216 (250)
T ss_pred             cCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHH---HHHH---------hcC--CCCCCCCC
Confidence            678899999999988899999999999999999999999854322   111   1111         111  11233344


Q ss_pred             HHHHHHHHHHhcccCCCCCCCH---HHHHHH
Q 047215          757 LEKFGEIAEKCLDDEGKNRPTM---GEVLWH  784 (851)
Q Consensus       757 ~~~l~~l~~~Cl~~dP~~RPt~---~evl~~  784 (851)
                      +..+.+++.+||..||.+||++   +++++|
T Consensus       217 ~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~  247 (250)
T cd05123         217 SPEARDLISGLLQKDPTKRLGSGGAEEIKAH  247 (250)
T ss_pred             CHHHHHHHHHHhcCCHhhCCCcccHHHHHhC
Confidence            5678999999999999999999   788777

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.97  E-value=5.9e-31  Score=315.52  Aligned_cols=145  Identities=30%  Similarity=0.426  Sum_probs=129.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|.+.++||+|+||.||+|... .+..+|||++...   .......+..|+.+++.++||||+++++++...+..+|||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            57888999999999999999875 5788999987643   2334567889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      ||+++++|.+++...  ..+++..+++++.||+.||+|||+   .+||||||||+||||+.++.+||+|||+++
T Consensus        84 Ey~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          84 EYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             eCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            999999999998543  357888999999999999999995   899999999999999999999999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.97  E-value=3.7e-33  Score=277.19  Aligned_cols=249  Identities=24%  Similarity=0.280  Sum_probs=192.8

Q ss_pred             eeeeeeecceEEEEEEEc-CcceeEEeecCCCC-hhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEEecCCc
Q 047215          518 SLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-EQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANG  594 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~Ey~~~g  594 (851)
                      ...||.|.||+|+|-.++ .++..|||+++... .....++..|.+...+- +.||||+++|.+..++..||.||.|+- 
T Consensus        69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~-  147 (361)
T KOG1006|consen   69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI-  147 (361)
T ss_pred             HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-
Confidence            457999999999999864 67889999988763 46677888888876665 799999999999999999999999964 


Q ss_pred             chhhh---ccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          595 TLRSH---LFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       595 sL~~~---L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ||..+   ++......+++..+-.|......||.||..  +..|||||+||+|||||..|.+||||||++....   .+-
T Consensus       148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv---~Si  222 (361)
T KOG1006|consen  148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV---DSI  222 (361)
T ss_pred             hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHH---HHH
Confidence            55333   333344568888888999999999999997  7889999999999999999999999999986532   222


Q ss_pred             cccccccCCcccCcccccc--cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc-cC
Q 047215          672 VSTAVKGSFGYLDPEYFWR--QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP-HL  748 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~--~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~-~l  748 (851)
                      ..+.-.|...|||||.+..  ..|+.++||||||++|+|+.||+.|+.....     +.+......       .-|| .+
T Consensus       223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-----vfeql~~Vv-------~gdpp~l  290 (361)
T KOG1006|consen  223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-----VFEQLCQVV-------IGDPPIL  290 (361)
T ss_pred             HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-----HHHHHHHHH-------cCCCCee
Confidence            3345568999999999963  3589999999999999999999999865432     111111110       1122 22


Q ss_pred             CCCC-ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          749 KGNY-SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       749 ~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ..+. .-.....+..++..||-+|-+.||...+++++
T Consensus       291 ~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  291 LFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             cCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence            1111 12345668999999999999999999999888

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.2e-31  Score=297.16  Aligned_cols=240  Identities=21%  Similarity=0.295  Sum_probs=196.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      +..|.....+|.|+|+.|-++.. ...+..++|++....    .+-.+|+.++... +||||+++.+.+..+.+.|+|||
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            56677778899999999988875 455677899887662    2335677666665 79999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE-cCCCeEEEeeccccccCCCCC
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL-DENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl-d~~~~~kl~DFGla~~~~~~~  668 (851)
                      .+.++-|.+.+.....  .. .++..|+.+|+.++.|||+   +++|||||||+|||+ +..+.++|+|||.++..... 
T Consensus       397 ~l~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-  469 (612)
T KOG0603|consen  397 LLDGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-  469 (612)
T ss_pred             hccccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence            9999998888755442  33 7788899999999999995   999999999999999 68899999999999875443 


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                          ....+-|..|.|||++....|++++|+||||++||+||||+.|+......  ..+                .....
T Consensus       470 ----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei----------------~~~i~  527 (612)
T KOG0603|consen  470 ----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEI----------------HTRIQ  527 (612)
T ss_pred             ----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHH----------------HHhhc
Confidence                23445688999999999999999999999999999999999998754322  111                11112


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .+.++...+...++|+.+||+.||.+||+|.+++.|
T Consensus       528 ~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  528 MPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH  563 (612)
T ss_pred             CCccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence            234446677789999999999999999999999999

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=2.1e-31  Score=250.04  Aligned_cols=264  Identities=22%  Similarity=0.297  Sum_probs=198.4

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +|+..++||+|.||+||||+.. .+..||+|+....  .+.-.....+||.+|+.++|+|||+++++...++.+-+|+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            3455668999999999999864 5678999987654  223345678999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      |.. +|..+... -.+.++.+....++.|+++||.++|+   +++.|||+||.|.|++.+|+.|++|||+++...-  ..
T Consensus        83 cdq-dlkkyfds-lng~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgi--pv  155 (292)
T KOG0662|consen   83 CDQ-DLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGI--PV  155 (292)
T ss_pred             hhH-HHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCC--ce
Confidence            976 67665433 23568888999999999999999996   9999999999999999999999999999986432  12


Q ss_pred             ccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCC-CCCCcchhcHHHHHHHHhhhcc---cccccC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVIN-PTLPKDQINLADWAMKWQKQRS---LKSIID  745 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~-~~~~~~~~~l~~~~~~~~~~~~---~~~i~d  745 (851)
                      .......-|..|.+|.++-+. -|+...|+||-||++.||.....|.. +..-.++...+-|......+..   +..+.|
T Consensus       156 rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpd  235 (292)
T KOG0662|consen  156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPD  235 (292)
T ss_pred             EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCC
Confidence            223445578999999998765 58999999999999999988665544 4433343333333322222221   122223


Q ss_pred             ccCCCCCC---------hhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          746 PHLKGNYS---------PESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~---------~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      -..-+.++         +.....-++++++.|.-+|.+|.+++++++|
T Consensus       236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh  283 (292)
T KOG0662|consen  236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH  283 (292)
T ss_pred             CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence            22212222         2233445789999999999999999999999

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.97  E-value=6e-31  Score=276.49  Aligned_cols=225  Identities=20%  Similarity=0.179  Sum_probs=179.9

Q ss_pred             ecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcchhhhccC
Q 047215          524 GGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG  602 (851)
Q Consensus       524 G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~  602 (851)
                      |.+|.||+++. .+++.+|+|++....     .+..|...+....||||+++++++...+..++||||+++|+|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            88999999986 456789999987543     234566666667899999999999999999999999999999998854


Q ss_pred             CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcc
Q 047215          603 SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY  682 (851)
Q Consensus       603 ~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y  682 (851)
                      .  ..+++..+..++.|++.||.|||   +.+++||||||+||+++.++.++++|||++......     .....++..|
T Consensus        79 ~--~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y  148 (237)
T cd05576          79 F--LNIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENMY  148 (237)
T ss_pred             h--cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCccc
Confidence            3  35889999999999999999999   489999999999999999999999999987653221     1223457789


Q ss_pred             cCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHH
Q 047215          683 LDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGE  762 (851)
Q Consensus       683 ~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~  762 (851)
                      +|||.+....++.++||||+|++++||++|+.|+.......                 ..    ......+...+..+.+
T Consensus       149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-----------------~~----~~~~~~~~~~~~~~~~  207 (237)
T cd05576         149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-----------------NT----HTTLNIPEWVSEEARS  207 (237)
T ss_pred             cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-----------------cc----ccccCCcccCCHHHHH
Confidence            99999988889999999999999999999987754321100                 00    0001122334567899


Q ss_pred             HHHHhcccCCCCCCCH-----HHHHHH
Q 047215          763 IAEKCLDDEGKNRPTM-----GEVLWH  784 (851)
Q Consensus       763 l~~~Cl~~dP~~RPt~-----~evl~~  784 (851)
                      ++.+||+.||.+||++     +++++|
T Consensus       208 li~~~l~~dp~~R~~~~~~~~~~~~~h  234 (237)
T cd05576         208 LLQQLLQFNPTERLGAGVAGVEDIKSH  234 (237)
T ss_pred             HHHHHccCCHHHhcCCCccchHHHHcC
Confidence            9999999999999996     777777

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.97  E-value=2.4e-30  Score=295.56  Aligned_cols=260  Identities=21%  Similarity=0.261  Sum_probs=183.1

Q ss_pred             HhcCCceeeeeeeecceEEEEEEE-----------------cCcceeEEeecCCCChhhHHH--------------HHHH
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEI-----------------EDCTLAAIKRANPQSEQGLAE--------------FETE  559 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E  559 (851)
                      ..++|+..++||+|+||.||+|..                 .++..||||++........++              +..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            467899999999999999999964                 234578999986543322233              3457


Q ss_pred             HHHHHhcCCcce-----eeEEEEEcc--------CCcEEEEEEecCCcchhhhccCCC----------------------
Q 047215          560 IEMLSKLRHRHL-----VSLIGFCDE--------QNEMILVYEYMANGTLRSHLFGSD----------------------  604 (851)
Q Consensus       560 i~~l~~l~HpnI-----v~l~g~~~~--------~~~~~lV~Ey~~~gsL~~~L~~~~----------------------  604 (851)
                      +.++.+++|.++     ++++++|..        ++..+|||||+++|+|.++|+...                      
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            778888876654     677888753        357899999999999999986421                      


Q ss_pred             CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccC
Q 047215          605 LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLD  684 (851)
Q Consensus       605 ~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~a  684 (851)
                      ...++|..+..++.|++++|.|||+   .+|+||||||+|||++.++.+||+|||+++....... .......+|+.|+|
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~a  378 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSP  378 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeC
Confidence            1234677888999999999999995   8999999999999999999999999999875332111 11122335789999


Q ss_pred             cccccccCC----------------------CchHHHHHHHHHHHHHHhCCc-CCCCCCCcch------hcHHHHHHHHh
Q 047215          685 PEYFWRQQL----------------------TEKSDVYSFGVVLFEVVCARA-VINPTLPKDQ------INLADWAMKWQ  735 (851)
Q Consensus       685 PE~~~~~~~----------------------t~ksDVwS~GvvL~eLltG~~-p~~~~~~~~~------~~l~~~~~~~~  735 (851)
                      ||.+.....                      ..+.||||+||+++||++|.. |+........      ..+..|..   
T Consensus       379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~---  455 (507)
T PLN03224        379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM---  455 (507)
T ss_pred             hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh---
Confidence            998854321                      134799999999999999875 4432111110      11111111   


Q ss_pred             hhcccccccCccCCCCCChhHHHHHHHHHHHhcccCC---CCCCCHHHHHHH
Q 047215          736 KQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEG---KNRPTMGEVLWH  784 (851)
Q Consensus       736 ~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP---~~RPt~~evl~~  784 (851)
                             .......-.......+...+|+.+||..+|   .+|+|++|+|+|
T Consensus       456 -------~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H  500 (507)
T PLN03224        456 -------YKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH  500 (507)
T ss_pred             -------hcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence                   000011111123455678999999999766   689999999999

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.8e-31  Score=276.98  Aligned_cols=242  Identities=24%  Similarity=0.369  Sum_probs=198.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCc-ceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDC-TLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~-~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~l  586 (851)
                      ..+|....+||+|+||.|.+|..++. ..+|||++++.   ..++.+.-..|-++|... +-|.+++|..+++.-+++|+
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF  427 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF  427 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence            35788899999999999999986654 57899988764   233445556677777766 57899999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+.+|+|--+++.-  +.+.+..+...|..||-||-+||+   ++||.||||..|||||.+|.+||+|||+++....
T Consensus       428 VMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~  502 (683)
T KOG0696|consen  428 VMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF  502 (683)
T ss_pred             EEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeeccccccccc
Confidence            99999999998888543  457788889999999999999995   9999999999999999999999999999986433


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                        ......+.+||+.|+|||++..++|+..+|.|||||+||||+.|++||++..+.+.               ...|++.
T Consensus       503 --~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~el---------------F~aI~eh  565 (683)
T KOG0696|consen  503 --DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL---------------FQAIMEH  565 (683)
T ss_pred             --CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHH---------------HHHHHHc
Confidence              22345678999999999999999999999999999999999999999987654321               1223332


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCC
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPT  777 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt  777 (851)
                      ..  .++...+.+...+....|.+.|.+|..
T Consensus       566 nv--syPKslSkEAv~ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  566 NV--SYPKSLSKEAVAICKGLLTKHPGKRLG  594 (683)
T ss_pred             cC--cCcccccHHHHHHHHHHhhcCCccccC
Confidence            22  355666677888999999999999964

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.97  E-value=3.2e-30  Score=301.82  Aligned_cols=259  Identities=19%  Similarity=0.278  Sum_probs=169.2

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcC-----cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEE------Ec
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIED-----CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGF------CD  579 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~-----~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~------~~  579 (851)
                      ..++|+..++||+|+||.||+|+..+     +..+|+|++......  +....|  .++...|.+++.++..      +.
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            45789999999999999999998754     578899987643221  111111  1222222222222211      35


Q ss_pred             cCCcEEEEEEecCCcchhhhccCCCCC------------------CCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCC
Q 047215          580 EQNEMILVYEYMANGTLRSHLFGSDLP------------------PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVK  641 (851)
Q Consensus       580 ~~~~~~lV~Ey~~~gsL~~~L~~~~~~------------------~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk  641 (851)
                      .+.+.+|||||+++++|.+++......                  ......+..++.|++.||+|||+   ++|+|||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLK  282 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVK  282 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCC
Confidence            667899999999999999988643211                  11233456799999999999995   899999999


Q ss_pred             CCCeEEcC-CCeEEEeeccccccCCCCCccccccccccCCcccCccccccc----------------------CCCchHH
Q 047215          642 TTNILLDE-NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ----------------------QLTEKSD  698 (851)
Q Consensus       642 ~~NILld~-~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~t~ksD  698 (851)
                      |+|||++. ++.+||+|||+++..... .........+++.|+|||.+...                      .++.++|
T Consensus       283 P~NILl~~~~~~~KL~DFGlA~~l~~~-~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D  361 (566)
T PLN03225        283 PQNIIFSEGSGSFKIIDLGAAADLRVG-INYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD  361 (566)
T ss_pred             HHHEEEeCCCCcEEEEeCCCccccccc-cccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence            99999985 689999999999754321 12223456789999999965322                      2445679


Q ss_pred             HHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhc----ccccccCccCCCC----C--ChhHHHHHHHHHHHhc
Q 047215          699 VYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR----SLKSIIDPHLKGN----Y--SPESLEKFGEIAEKCL  768 (851)
Q Consensus       699 VwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~----~~~~i~d~~l~~~----~--~~~~~~~l~~l~~~Cl  768 (851)
                      ||||||+||||+++..+....       +..+...+...+    .......+....+    +  .........+|+.+||
T Consensus       362 VwSlGviL~el~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL  434 (566)
T PLN03225        362 IYSAGLIFLQMAFPNLRSDSN-------LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM  434 (566)
T ss_pred             cHHHHHHHHHHHhCcCCCchH-------HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence            999999999999876543221       111111111000    0000111110000    0  0111234568999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 047215          769 DDEGKNRPTMGEVLWH  784 (851)
Q Consensus       769 ~~dP~~RPt~~evl~~  784 (851)
                      +.||++|||++|+++|
T Consensus       435 ~~dP~kR~ta~e~L~H  450 (566)
T PLN03225        435 RFKGRQRISAKAALAH  450 (566)
T ss_pred             cCCcccCCCHHHHhCC
Confidence            9999999999999999

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.97  E-value=6.1e-30  Score=267.41  Aligned_cols=238  Identities=28%  Similarity=0.371  Sum_probs=193.4

Q ss_pred             cceEEEEEEEcC-cceeEEeecCCCChhh-HHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcchhhhccC
Q 047215          525 GFGKVFKGEIED-CTLAAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG  602 (851)
Q Consensus       525 ~fG~Vykg~~~~-~~~vavK~~~~~~~~~-~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~  602 (851)
                      +||.||+|...+ +..+++|+........ .+.+.+|++.+++++|+|++++++++..+...++++||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            589999999864 7889999988765544 68899999999999999999999999999999999999999999999855


Q ss_pred             CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcc
Q 047215          603 SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY  682 (851)
Q Consensus       603 ~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y  682 (851)
                      ..  .+++.++..++.+++.+|.|||+   .+++|+||+|+||++++++.++|+|||.+.......   ......++..|
T Consensus        81 ~~--~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~  152 (244)
T smart00220       81 RG--RLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEY  152 (244)
T ss_pred             cc--CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCC
Confidence            43  38899999999999999999995   899999999999999999999999999987644321   23345678899


Q ss_pred             cCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC-CChhHHHHHH
Q 047215          683 LDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN-YSPESLEKFG  761 (851)
Q Consensus       683 ~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~-~~~~~~~~l~  761 (851)
                      ++||.+....++.++||||||+++++|++|..|+.......  ...++.    ..        ...... .....+..+.
T Consensus       153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~--~~~~~~----~~--------~~~~~~~~~~~~~~~~~  218 (244)
T smart00220      153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL--ELFKKI----GK--------PKPPFPPPEWKISPEAK  218 (244)
T ss_pred             CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHHH----hc--------cCCCCccccccCCHHHH
Confidence            99999998889999999999999999999998886531111  111110    00        011000 0011556789


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHH
Q 047215          762 EIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       762 ~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +++.+|+..+|.+||++.++++|
T Consensus       219 ~~i~~~l~~~p~~Rp~~~~~~~~  241 (244)
T smart00220      219 DLIRKLLVKDPEKRLTAEEALQH  241 (244)
T ss_pred             HHHHHHccCCchhccCHHHHhhC
Confidence            99999999999999999999987

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.97  E-value=4.4e-31  Score=275.59  Aligned_cols=263  Identities=19%  Similarity=0.258  Sum_probs=204.7

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcC-C-c----ceeeEEEEEccCCcE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-H-R----HLVSLIGFCDEQNEM  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H-p----nIv~l~g~~~~~~~~  584 (851)
                      +++|.+...+|+|.||.|-+.... .+..+|||+++..... .+...-|+++|.++. + |    .+|++.+|+.-.++.
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi  166 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI  166 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence            678899999999999999988754 3578999998765443 344577999999994 2 2    478889999999999


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC---------------
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE---------------  649 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~---------------  649 (851)
                      |||+|.| +-|+.++|..+.-.+++..++..|+.|+++++++||+   .+++|-||||+|||+..               
T Consensus       167 Civfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~~~~k~~~~~  242 (415)
T KOG0671|consen  167 CIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKTYNPKKKVCF  242 (415)
T ss_pred             EEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEEeccCCccce
Confidence            9999988 4499999998888899999999999999999999994   99999999999999921               


Q ss_pred             -----CCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcch
Q 047215          650 -----NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ  724 (851)
Q Consensus       650 -----~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~  724 (851)
                           +..+||+|||.|.....     ....+..|..|.|||++.+-.++..+||||+||||.||.+|...|+.....+.
T Consensus       243 ~r~~ks~~I~vIDFGsAtf~~e-----~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EH  317 (415)
T KOG0671|consen  243 IRPLKSTAIKVIDFGSATFDHE-----HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEH  317 (415)
T ss_pred             eccCCCcceEEEecCCcceecc-----CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHH
Confidence                 33589999999986221     12456789999999999999999999999999999999999999987765554


Q ss_pred             hcHHHHHHHH--------------hhhccc-----------ccccCccC----CCCCChhHHHHHHHHHHHhcccCCCCC
Q 047215          725 INLADWAMKW--------------QKQRSL-----------KSIIDPHL----KGNYSPESLEKFGEIAEKCLDDEGKNR  775 (851)
Q Consensus       725 ~~l~~~~~~~--------------~~~~~~-----------~~i~d~~l----~~~~~~~~~~~l~~l~~~Cl~~dP~~R  775 (851)
                      ..+.+.+..-              ...+.+           ....++..    ...........+.+|+++||..||.+|
T Consensus       318 LaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~R  397 (415)
T KOG0671|consen  318 LAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARR  397 (415)
T ss_pred             HHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccc
Confidence            4443332210              000100           00111000    001113445679999999999999999


Q ss_pred             CCHHHHHHH
Q 047215          776 PTMGEVLWH  784 (851)
Q Consensus       776 Pt~~evl~~  784 (851)
                      +|+.|+|+|
T Consensus       398 iTl~EAL~H  406 (415)
T KOG0671|consen  398 ITLREALSH  406 (415)
T ss_pred             ccHHHHhcC
Confidence            999999999

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=9.7e-32  Score=264.85  Aligned_cols=264  Identities=23%  Similarity=0.369  Sum_probs=193.5

Q ss_pred             ceeeeeeeecceEEEEEEEcC-cceeEEeecCCCC-hhh-HHHHHHHHHHHHhcCCcceeeEEEEEccC--------CcE
Q 047215          516 DESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQS-EQG-LAEFETEIEMLSKLRHRHLVSLIGFCDEQ--------NEM  584 (851)
Q Consensus       516 ~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~-~~~-~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--------~~~  584 (851)
                      +...+||+|.||+||+|+..+ ++.||+|+....+ ..+ -....+|+++|..|+|+|++.+++.|...        ..+
T Consensus        20 ek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~   99 (376)
T KOG0669|consen   20 EKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATF   99 (376)
T ss_pred             HHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccccee
Confidence            334579999999999998654 5667777654322 222 24567899999999999999999988432        348


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      +||+++|++ +|..+|.+. ...++..++.++..++..||.|+|.   ..|+|||+|+.|+|++.++.+||+|||++|..
T Consensus       100 ylVf~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFGlar~f  174 (376)
T KOG0669|consen  100 YLVFDFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFGLARAF  174 (376)
T ss_pred             eeeHHHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeeccccccce
Confidence            999999988 888887443 3568899999999999999999994   88999999999999999999999999999754


Q ss_pred             CCCCcc--ccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc-
Q 047215          665 PSMEHT--HVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL-  740 (851)
Q Consensus       665 ~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~-  740 (851)
                      ...+..  ...+...-|+.|.+||.+.+ +.|+++.|||.-||++.||+|+.+.++......+..++.-...-...+.. 
T Consensus       175 s~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP  254 (376)
T KOG0669|consen  175 STSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWP  254 (376)
T ss_pred             ecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCC
Confidence            322211  12234456999999999876 57999999999999999999999888876665555443322111111000 


Q ss_pred             --------cccc-CccCCCCCC--hhH------HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 --------KSII-DPHLKGNYS--PES------LEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 --------~~i~-d~~l~~~~~--~~~------~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                              ..+- .|...+.+.  ++.      .+...+|+.++|..||.+|+.+.+++.|
T Consensus       255 ~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh  315 (376)
T KOG0669|consen  255 NVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH  315 (376)
T ss_pred             CcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence                    0110 110011110  111      1357799999999999999999999999

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=3.2e-30  Score=270.90  Aligned_cols=256  Identities=21%  Similarity=0.341  Sum_probs=198.6

Q ss_pred             CceeeeeeeecceEEEEEE-EcCcceeEEeecCCCC--h-----hhHHHHHHHHHHHHhcCCcceeeEEEEEc-cCCcEE
Q 047215          515 FDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQS--E-----QGLAEFETEIEMLSKLRHRHLVSLIGFCD-EQNEMI  585 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~-~~~~~~vavK~~~~~~--~-----~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~-~~~~~~  585 (851)
                      |-...+||+|||+.||||. +.....||+|+-....  .     .-.+...+|.++.+.|+||.||++++|+. +.+.+|
T Consensus       465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFC  544 (775)
T KOG1151|consen  465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFC  544 (775)
T ss_pred             HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccce
Confidence            5556789999999999996 5667889999754321  1     11234668999999999999999999985 556789


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE---cCCCeEEEeeccccc
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSK  662 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl---d~~~~~kl~DFGla~  662 (851)
                      -|+|||++.+|.-+|..++  .++++++..|+.||+.||.||.. -+.+|||-||||.||||   +..|.+||+||||++
T Consensus       545 TVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSK  621 (775)
T KOG1151|consen  545 TVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSK  621 (775)
T ss_pred             eeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeEeeecchhh
Confidence            9999999999999996554  58999999999999999999985 46789999999999999   467899999999999


Q ss_pred             cCCCCCcc-----ccccccccCCcccCcccccc----cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHH
Q 047215          663 TGPSMEHT-----HVSTAVKGSFGYLDPEYFWR----QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMK  733 (851)
Q Consensus       663 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~----~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~  733 (851)
                      .+......     .......||..|++||++.-    .+.+.|+||||.||++|..+.|+.||........  +.     
T Consensus       622 IMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQd--IL-----  694 (775)
T KOG1151|consen  622 IMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQD--IL-----  694 (775)
T ss_pred             hccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHH--HH-----
Confidence            87654433     23456779999999999863    3678999999999999999999999976543221  11     


Q ss_pred             HhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          734 WQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       734 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                        ....+.....  ..-...+.+....+.++++||+.--++|....++..+
T Consensus       695 --qeNTIlkAtE--VqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d  741 (775)
T KOG1151|consen  695 --QENTILKATE--VQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD  741 (775)
T ss_pred             --hhhchhccee--ccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence              1111111111  1111124456678999999999999999999888777

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.96  E-value=5.5e-30  Score=246.11  Aligned_cols=206  Identities=22%  Similarity=0.308  Sum_probs=168.7

Q ss_pred             HHHhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEE
Q 047215          509 RVATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       509 ~~~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~  585 (851)
                      +...++......||+|++|.|-+-++ .+|+..|+|++... +.+..+...+|+.+..+. .+|.+|+++|........+
T Consensus        42 eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvw  121 (282)
T KOG0984|consen   42 EVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVW  121 (282)
T ss_pred             ccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEE
Confidence            33445555566799999999988875 67899999998765 556667788888887766 7999999999999999999


Q ss_pred             EEEEecCCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          586 LVYEYMANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      +.||.|.. ||..+-..  .....+++.-+-+|+..+.+||.|||+  +..+||||+||+|||++.+|++|+||||++..
T Consensus       122 IcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~  198 (282)
T KOG0984|consen  122 ICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGY  198 (282)
T ss_pred             EeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEccccccee
Confidence            99999965 66554321  234568889999999999999999998  88999999999999999999999999999875


Q ss_pred             CCCCCccccccccccCCcccCcccccc----cCCCchHHHHHHHHHHHHHHhCCcCCCCCC
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFWR----QQLTEKSDVYSFGVVLFEVVCARAVINPTL  720 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~t~ksDVwS~GvvL~eLltG~~p~~~~~  720 (851)
                      ..+   +-..+...|...|||||.+..    ..|+.|+||||||+.+.||.+++.|+....
T Consensus       199 L~d---SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~  256 (282)
T KOG0984|consen  199 LVD---SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG  256 (282)
T ss_pred             ehh---hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence            322   112233568899999999863    379999999999999999999999987643

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=5.3e-29  Score=253.80  Aligned_cols=257  Identities=23%  Similarity=0.381  Sum_probs=200.3

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~  585 (851)
                      .-++|+..++||+|+|.+|..+++.. .+.+|+|++++.   ......-.+.|-.+..+- +||.+|.|..+++....++
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf  327 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF  327 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence            44789999999999999999998765 467788876643   333344556677777666 7999999999999999999


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      +|.||+++|+|--+++..+  .++++.+......|..||.|||+   +|||.||||..|+|||.+|.+||+|+|+++...
T Consensus       328 fvieyv~ggdlmfhmqrqr--klpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~l  402 (593)
T KOG0695|consen  328 FVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL  402 (593)
T ss_pred             EEEEEecCcceeeehhhhh--cCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcCC
Confidence            9999999999987775543  58888888889999999999995   999999999999999999999999999998643


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCC-CcchhcHHHHHHHHhhhccccccc
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL-PKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~-~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      .  ......+.+||+.|+|||++++..|...+|.|++||+++||+.|+.||+--. .....+..++.-+.        |+
T Consensus       403 ~--~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqv--------il  472 (593)
T KOG0695|consen  403 G--PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQV--------IL  472 (593)
T ss_pred             C--CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHH--------Hh
Confidence            3  3344678999999999999999999999999999999999999999997421 11112222222221        11


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCC------HHHHHHH
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT------MGEVLWH  784 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt------~~evl~~  784 (851)
                      ...+  .++...+.....+++.-|++||++|..      +.++-.|
T Consensus       473 ekqi--riprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h  516 (593)
T KOG0695|consen  473 EKQI--RIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSH  516 (593)
T ss_pred             hhcc--cccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcc
Confidence            2222  123344455677888899999999863      4555555

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.96  E-value=7.8e-30  Score=288.25  Aligned_cols=247  Identities=26%  Similarity=0.385  Sum_probs=190.5

Q ss_pred             CCceeeeeeeecceE-EEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEEec
Q 047215          514 NFDESLMIGVGGFGK-VFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~-Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      -|...+++|.|+-|+ ||+|.+++ +.||||++-...   ..-..+||..|+.- +|||||++++.-.+++..||+.|.|
T Consensus       510 ~~~~~eilG~Gs~Gt~Vf~G~ye~-R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC  585 (903)
T KOG1027|consen  510 FFSPKEILGYGSNGTVVFRGVYEG-REVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC  585 (903)
T ss_pred             eeccHHHcccCCCCcEEEEEeeCC-ceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence            355566899999877 69999876 588999987543   23457899999998 5999999999999999999999999


Q ss_pred             CCcchhhhccCC--CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-----CCeEEEeeccccccC
Q 047215          592 ANGTLRSHLFGS--DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-----NFVAKMSDFGLSKTG  664 (851)
Q Consensus       592 ~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-----~~~~kl~DFGla~~~  664 (851)
                      .. +|++++...  +.....-...+.+..|+++||+|||+   .+||||||||.||||+.     ..+++|+|||+++..
T Consensus       586 ~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl  661 (903)
T KOG1027|consen  586 AC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL  661 (903)
T ss_pred             hh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence            76 999999763  22222224567888999999999996   99999999999999964     368999999999876


Q ss_pred             CCCCcc-ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhC-CcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          665 PSMEHT-HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA-RAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       665 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      ...... .......||-+|+|||++....-+.++||+|+|||+|..++| ..||......+. ++.      .....+..
T Consensus       662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~-NIl------~~~~~L~~  734 (903)
T KOG1027|consen  662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA-NIL------TGNYTLVH  734 (903)
T ss_pred             CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh-hhh------cCccceee
Confidence            543222 224567799999999999998889999999999999999998 668876543321 110      00011111


Q ss_pred             ccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       743 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                           +.  -.+++  ...+||.+|++.+|..||++.+||.|
T Consensus       735 -----L~--~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H  767 (903)
T KOG1027|consen  735 -----LE--PLPDC--EAKDLISRMLNPDPQLRPSATDVLNH  767 (903)
T ss_pred             -----ec--cCchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence                 11  01122  68899999999999999999999999

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=8.1e-30  Score=272.50  Aligned_cols=244  Identities=20%  Similarity=0.281  Sum_probs=201.7

Q ss_pred             eeeeeeecceEEEEEEEcCcc-eeEEeecCC---CChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          518 SLMIGVGGFGKVFKGEIEDCT-LAAIKRANP---QSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~-~vavK~~~~---~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      +-.||-||||.|=+...+... ..|+|.+++   ....+.+....|-.+|..++.|.||+|+-.+.+....||+||-|-+
T Consensus       425 iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClG  504 (732)
T KOG0614|consen  425 IATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLG  504 (732)
T ss_pred             hhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcC
Confidence            346999999999988766543 256555543   4566677888999999999999999999999999999999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |.|...|+.  ++.+.......++..+.+|++|||+   ++||.|||||+|+|||.+|-+||.|||+|+....   ....
T Consensus       505 GElWTiLrd--Rg~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~---g~KT  576 (732)
T KOG0614|consen  505 GELWTILRD--RGSFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS---GRKT  576 (732)
T ss_pred             chhhhhhhh--cCCcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhcc---CCce
Confidence            999999954  4578888888999999999999995   9999999999999999999999999999987443   3345


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS  753 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  753 (851)
                      -+.|||+.|.|||++.....+.++|.||||++++||++|.+||....+...-+++-.        .+..       -.+|
T Consensus       577 wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILk--------Gid~-------i~~P  641 (732)
T KOG0614|consen  577 WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILK--------GIDK-------IEFP  641 (732)
T ss_pred             eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHh--------hhhh-------hhcc
Confidence            678999999999999999999999999999999999999999988766433222110        0111       1344


Q ss_pred             hhHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 047215          754 PESLEKFGEIAEKCLDDEGKNRPT-----MGEVLWH  784 (851)
Q Consensus       754 ~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  784 (851)
                      ........+++++.+..+|.+|..     +.++-+|
T Consensus       642 r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH  677 (732)
T KOG0614|consen  642 RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH  677 (732)
T ss_pred             cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence            455566789999999999999986     7888888

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.8e-28  Score=267.53  Aligned_cols=254  Identities=24%  Similarity=0.398  Sum_probs=195.6

Q ss_pred             HhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      ....|..++.||-|+||+|.+++. +....+|+|.+.+.   .+.+....+.|-.+|..-+.+-||+|+-.|.+++.+|+
T Consensus       627 dKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYF  706 (1034)
T KOG0608|consen  627 DKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYF  706 (1034)
T ss_pred             cccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEE
Confidence            335688899999999999999975 44567899987765   34566778899999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC--
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG--  664 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~--  664 (851)
                      ||||++||++-.+|....  -+.+......+..++.|+++.|   +.|+|||||||.|||||.+|.+||+||||+.-.  
T Consensus       707 VMdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRW  781 (1034)
T KOG0608|consen  707 VMDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW  781 (1034)
T ss_pred             EEeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeecccccccee
Confidence            999999999999885543  4667777777889999999999   699999999999999999999999999998410  


Q ss_pred             -------CCCCccc-------------------------------cccccccCCcccCcccccccCCCchHHHHHHHHHH
Q 047215          665 -------PSMEHTH-------------------------------VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVL  706 (851)
Q Consensus       665 -------~~~~~~~-------------------------------~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL  706 (851)
                             ...+..+                               ......||+.|+|||++....++..+|.||.||||
T Consensus       782 THdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil  861 (1034)
T KOG0608|consen  782 THDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVIL  861 (1034)
T ss_pred             ccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHH
Confidence                   0000000                               01245699999999999999999999999999999


Q ss_pred             HHHHhCCcCCCCCCCcc-hhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCC---CHHHHH
Q 047215          707 FEVVCARAVINPTLPKD-QINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRP---TMGEVL  782 (851)
Q Consensus       707 ~eLltG~~p~~~~~~~~-~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---t~~evl  782 (851)
                      |||+.|+.||....+.+ +..+..|-.          .++-...+..+.+|...+.+|   |.  +++.|.   ..+||-
T Consensus       862 ~em~~g~~pf~~~tp~~tq~kv~nw~~----------~l~~~~~~~ls~e~~~li~kL---c~--sad~RLGkng~d~vK  926 (1034)
T KOG0608|consen  862 YEMLVGQPPFLADTPGETQYKVINWRN----------FLHIPYQGNLSKEALDLIQKL---CC--SADSRLGKNGADQVK  926 (1034)
T ss_pred             HHHhhCCCCccCCCCCcceeeeeehhh----------ccccccccccCHHHHHHHHHH---hc--Chhhhhcccchhhhh
Confidence            99999999998876654 333444422          223233445566655444333   33  355554   355676


Q ss_pred             HH
Q 047215          783 WH  784 (851)
Q Consensus       783 ~~  784 (851)
                      .|
T Consensus       927 aH  928 (1034)
T KOG0608|consen  927 AH  928 (1034)
T ss_pred             cC
Confidence            66

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=8.5e-28  Score=257.02  Aligned_cols=272  Identities=22%  Similarity=0.323  Sum_probs=198.9

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcC-----C---cceeeEEEEEc---
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-----H---RHLVSLIGFCD---  579 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-----H---pnIv~l~g~~~---  579 (851)
                      ..+|...++||.|.|++||++.. ++.+.||+|+.+.... -.+....||++|++++     |   .+||+|++.|.   
T Consensus        77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh-YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG  155 (590)
T KOG1290|consen   77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH-YTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG  155 (590)
T ss_pred             CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhH-HHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence            36899999999999999999974 5667899998764322 2355688999999984     3   47999999984   


Q ss_pred             -cCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCC--------
Q 047215          580 -EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN--------  650 (851)
Q Consensus       580 -~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~--------  650 (851)
                       .+.+.|||+|++ |-+|..+|....-..++...+.+||.||+.||.|||.  +.+|||-||||+|||+..+        
T Consensus       156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPENvLl~~~e~~~~~~~  232 (590)
T KOG1290|consen  156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKPENVLLCSTEIDPAKDA  232 (590)
T ss_pred             CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCcceeeeeccccchhhhh
Confidence             457899999998 5588888887777789999999999999999999998  7899999999999999321        


Q ss_pred             ---C----------------e-----------------------------------------------------------
Q 047215          651 ---F----------------V-----------------------------------------------------------  652 (851)
Q Consensus       651 ---~----------------~-----------------------------------------------------------  652 (851)
                         +                .                                                           
T Consensus       233 ~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~  312 (590)
T KOG1290|consen  233 REAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGN  312 (590)
T ss_pred             hhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCcc
Confidence               0                0                                                           


Q ss_pred             --------------------------------------------------------------------------------
Q 047215          653 --------------------------------------------------------------------------------  652 (851)
Q Consensus       653 --------------------------------------------------------------------------------  652 (851)
                                                                                                      
T Consensus       313 ~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~  392 (590)
T KOG1290|consen  313 ESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIR  392 (590)
T ss_pred             ccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCcccee
Confidence                                                                                            


Q ss_pred             EEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcc----hhcHH
Q 047215          653 AKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD----QINLA  728 (851)
Q Consensus       653 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~----~~~l~  728 (851)
                      +||+|||-|+-.     ....+.-..|..|.|||++.+..|+..+||||++|+++||+||...|.+.....    +..++
T Consensus       393 vKIaDlGNACW~-----~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA  467 (590)
T KOG1290|consen  393 VKIADLGNACWV-----HKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIA  467 (590)
T ss_pred             EEEeeccchhhh-----hhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHH
Confidence            000000000000     000112235667999999999999999999999999999999999988754332    21221


Q ss_pred             HHHH---H---------------HhhhcccccccCccC---------CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHH
Q 047215          729 DWAM---K---------------WQKQRSLKSIIDPHL---------KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEV  781 (851)
Q Consensus       729 ~~~~---~---------------~~~~~~~~~i~d~~l---------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev  781 (851)
                      ....   .               +.+.+.+..|-.-+.         +..++.+...++.+++.-||+.+|++|||+.+.
T Consensus       468 ~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~c  547 (590)
T KOG1290|consen  468 LIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQC  547 (590)
T ss_pred             HHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHH
Confidence            1111   0               111122222211111         235678889999999999999999999999999


Q ss_pred             HHHHHHHHHhhhhhcccCCC
Q 047215          782 LWHLEYVLQLHEAWMRTDDR  801 (851)
Q Consensus       782 l~~L~~~~~~~~~w~~~~~~  801 (851)
                      |+|         +|+.....
T Consensus       548 l~h---------PwLn~~~~  558 (590)
T KOG1290|consen  548 LKH---------PWLNPVAG  558 (590)
T ss_pred             hcC---------ccccCCCC
Confidence            999         99986444

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=9.6e-30  Score=253.05  Aligned_cols=264  Identities=24%  Similarity=0.340  Sum_probs=200.6

Q ss_pred             ceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC-----CcEEEE
Q 047215          516 DESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ-----NEMILV  587 (851)
Q Consensus       516 ~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~-----~~~~lV  587 (851)
                      +..+.||.|+||.||..+. ++++.++.|++..-  +-..-+.+.+|+++|..++|.|++..++.....     .++|.+
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~  135 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL  135 (449)
T ss_pred             CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence            3456799999999999875 57889999987653  333446788999999999999999998876544     367888


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      .|.|.. +|+..+-  ...+++...+.-++.||++||+|||+   .+|.||||||.|.|++.|..+||||||++|.....
T Consensus       136 TELmQS-DLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d  209 (449)
T KOG0664|consen  136 TELMQS-DLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR  209 (449)
T ss_pred             HHHHHh-hhhheec--cCCCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEecccccccccchh
Confidence            998854 8888773  34578888889999999999999996   89999999999999999999999999999975543


Q ss_pred             CccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHH--------HHHhhhc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA--------MKWQKQR  738 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~--------~~~~~~~  738 (851)
                      +.. ..+...-|..|.|||.+++ +.|+.+.||||.||++.||+..+..|+...|-++.+++.-.        ++...++
T Consensus       210 ~~~-hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG  288 (449)
T KOG0664|consen  210 DRL-NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG  288 (449)
T ss_pred             hhh-hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence            332 3344456889999999986 47999999999999999999999999888887776554322        2222222


Q ss_pred             ccccccCccCC-CCC------C--hhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          739 SLKSIIDPHLK-GNY------S--PESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       739 ~~~~i~d~~l~-~~~------~--~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      ....++....+ .++      +  ...-.....+..+++..||++|.+.++++.|+.
T Consensus       289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~  345 (449)
T KOG0664|consen  289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY  345 (449)
T ss_pred             hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence            22222211111 001      0  122234567888899999999999999999853

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.95  E-value=1e-28  Score=272.24  Aligned_cols=254  Identities=26%  Similarity=0.405  Sum_probs=209.0

Q ss_pred             HhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ..++|+....+|.|.+|.|||++. ..+..+|+|.++....+...-.++|+-+++..+|||||.++|.+...+.++++||
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME   92 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME   92 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence            446788889999999999999985 5678899999888877778888999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      ||.+|+|++.-+.  ..++++.++..+++...+||+|||+   .+-+|||||-.|||+++.+.+|++|||.+.....  .
T Consensus        93 ycgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqita--t  165 (829)
T KOG0576|consen   93 YCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITA--T  165 (829)
T ss_pred             ecCCCcccceeee--cccchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhh--h
Confidence            9999999998754  3579999999999999999999996   8899999999999999999999999999765322  2


Q ss_pred             cccccccccCCcccCccccc---ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC-
Q 047215          670 THVSTAVKGSFGYLDPEYFW---RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID-  745 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d-  745 (851)
                      -..+....||+.|||||+..   .+.|..++|||++|+...||---.+|.....+....       .++..    ..++ 
T Consensus       166 i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l-------~LmTk----S~~qp  234 (829)
T KOG0576|consen  166 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRAL-------FLMTK----SGFQP  234 (829)
T ss_pred             hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHH-------HHhhc----cCCCC
Confidence            22345678999999999874   567999999999999999998777776555443221       11111    1122 


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      |.++.  ...-.+.+.+|++.||-++|++|||++.+|.|
T Consensus       235 p~lkD--k~kws~~fh~fvK~altknpKkRptaeklL~h  271 (829)
T KOG0576|consen  235 PTLKD--KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH  271 (829)
T ss_pred             CcccC--CccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence            22221  23345678999999999999999999999887

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.95  E-value=1.6e-26  Score=235.28  Aligned_cols=211  Identities=37%  Similarity=0.605  Sum_probs=182.5

Q ss_pred             eeeecceEEEEEEEcC-cceeEEeecCCCChh-hHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcchhh
Q 047215          521 IGVGGFGKVFKGEIED-CTLAAIKRANPQSEQ-GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS  598 (851)
Q Consensus       521 LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~~  598 (851)
                      ||+|.+|.||++...+ +..+++|+....... ....+.+|++.+++++|++++++++++......++++|++++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999999764 778899998766443 45678999999999999999999999999999999999999999999


Q ss_pred             hccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-CCeEEEeeccccccCCCCCccccccccc
Q 047215          599 HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-NFVAKMSDFGLSKTGPSMEHTHVSTAVK  677 (851)
Q Consensus       599 ~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-~~~~kl~DFGla~~~~~~~~~~~~~~~~  677 (851)
                      ++.... ..+++..+..++.+++++|.+||+   .+++|+||+|.||+++. ++.++|+|||.+........  ......
T Consensus        81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~  154 (215)
T cd00180          81 LLKENE-GKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIV  154 (215)
T ss_pred             HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhccc
Confidence            985542 358899999999999999999995   79999999999999999 89999999999876433211  123345


Q ss_pred             cCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhH
Q 047215          678 GSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPES  756 (851)
Q Consensus       678 gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  756 (851)
                      +...|++||.+... ..+.+.|+|++|+++++|                                               
T Consensus       155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------------------  187 (215)
T cd00180         155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------------------  187 (215)
T ss_pred             CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------------
Confidence            77899999999877 889999999999999998                                               


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          757 LEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       757 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                       ..+.+++.+|++.+|.+||++.+++++|
T Consensus       188 -~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 -PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             -HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence             3478999999999999999999998763

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.94  E-value=3.8e-27  Score=229.60  Aligned_cols=257  Identities=22%  Similarity=0.337  Sum_probs=192.1

Q ss_pred             hcCCceeeeeeeecceEEEEEE-EcCcceeEEeecCCCChhhHHHHHHHHHHHHhcC-CcceeeEEEEEccC--CcEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQ--NEMILV  587 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~-~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~--~~~~lV  587 (851)
                      .++|++.+++|+|.+++||.|. ..+...++||.+++..   .+.+.+|+.+|..|+ ||||++|++...+.  ....||
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi  113 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI  113 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence            3678888899999999999997 4566778899988653   356789999999997 99999999998554  567899


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-CCeEEEeeccccccCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-NFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-~~~~kl~DFGla~~~~~  666 (851)
                      +||+.+-+...+-     +.++...+.....++++||.|+||   .||+|||+||.|+++|. ...++|+|+|||....+
T Consensus       114 FE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp  185 (338)
T KOG0668|consen  114 FEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP  185 (338)
T ss_pred             hhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence            9999998876654     457777888899999999999996   99999999999999985 55799999999987544


Q ss_pred             CCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCC-CCCcchhcHHHHHHHH--------hh
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINP-TLPKDQINLADWAMKW--------QK  736 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~-~~~~~~~~l~~~~~~~--------~~  736 (851)
                      .....+   ...+..|.-||.+.. +.|+..-|+|||||+|.+|+..+.||.. ....+|.  +..+.-+        ..
T Consensus       186 ~~eYnV---RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQL--VkIakVLGt~el~~Yl~  260 (338)
T KOG0668|consen  186 GKEYNV---RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL--VKIAKVLGTDELYAYLN  260 (338)
T ss_pred             Cceeee---eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHH--HHHHHHhChHHHHHHHH
Confidence            333222   234567899998864 5789999999999999999999998754 3333332  2222111        00


Q ss_pred             h------cccccccCccCCC---CC-----ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          737 Q------RSLKSIIDPHLKG---NY-----SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       737 ~------~~~~~i~d~~l~~---~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .      .....++...-+.   .+     ..-..++..+++.+.|..|..+|||++|++.|
T Consensus       261 KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H  322 (338)
T KOG0668|consen  261 KYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH  322 (338)
T ss_pred             HHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence            0      0111111111100   00     01123668899999999999999999999999

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.94  E-value=2.6e-27  Score=242.04  Aligned_cols=255  Identities=22%  Similarity=0.285  Sum_probs=191.9

Q ss_pred             cCCceeeeeeeecceEEEEEE-EcCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC------Cc
Q 047215          513 NNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ------NE  583 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~-~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~------~~  583 (851)
                      .+|...+.+|.|.- .|-.+- .-.++.|++|+....  .....+...+|..++..+.|+||++++.++.-.      .+
T Consensus        17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e   95 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE   95 (369)
T ss_pred             eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence            34555566888877 444443 224577888876543  445567788999999999999999999998533      46


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .|+|||+|.. +|...++    -.++-+.+..|..|++.|++|||+   .+|+||||||+||++..+..+||.|||+|+.
T Consensus        96 ~y~v~e~m~~-nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~ar~  167 (369)
T KOG0665|consen   96 VYLVMELMDA-NLCQVIL----MELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGLART  167 (369)
T ss_pred             HHHHHHhhhh-HHHHHHH----HhcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchhhcc
Confidence            7999999965 8888875    246678889999999999999995   9999999999999999999999999999986


Q ss_pred             CCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhc-----
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR-----  738 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~-----  738 (851)
                      ...   .-..+....|..|.|||++.+..+.+.+||||.||++.||++|+-.|.+..--     .+|.......+     
T Consensus       168 e~~---~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~i-----dQ~~ki~~~lgtpd~~  239 (369)
T KOG0665|consen  168 EDT---DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHI-----DQWNKIIEQLGTPDPS  239 (369)
T ss_pred             cCc---ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHH-----HHHHHHHHHhcCCCHH
Confidence            322   23455667889999999999989999999999999999999999888754322     22322111110     


Q ss_pred             ----------------------cccccc-CccCCC--CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          739 ----------------------SLKSII-DPHLKG--NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       739 ----------------------~~~~i~-d~~l~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                                            ...+.+ |.....  +.++-....+++++.+||..+|++|.+++++|.|
T Consensus       240 F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H  310 (369)
T KOG0665|consen  240 FMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH  310 (369)
T ss_pred             HHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence                                  001111 111111  1122345668899999999999999999999999

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.93  E-value=2.4e-25  Score=230.42  Aligned_cols=199  Identities=31%  Similarity=0.453  Sum_probs=171.6

Q ss_pred             CceeeeeeeecceEEEEEEEcC-cceeEEeecCCCChh-hHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecC
Q 047215          515 FDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSEQ-GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      |+..+.||+|++|.||++...+ +..+++|........ ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            4566789999999999999875 778899998876554 67889999999999999999999999999999999999999


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccc
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~  672 (851)
                      +++|.+++..... .+++..+..++.+++.+|.+||+   .+++|+||+++||+++.++.++|+|||++........ ..
T Consensus        81 ~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~-~~  155 (225)
T smart00221       81 GGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA-AL  155 (225)
T ss_pred             CCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-cc
Confidence            9999999865432 17899999999999999999995   7999999999999999999999999999876443220 12


Q ss_pred             ccccccCCcccCcccc-cccCCCchHHHHHHHHHHHHHHhCCcCCCC
Q 047215          673 STAVKGSFGYLDPEYF-WRQQLTEKSDVYSFGVVLFEVVCARAVINP  718 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~-~~~~~t~ksDVwS~GvvL~eLltG~~p~~~  718 (851)
                      .....++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus       156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            2334577889999998 677888899999999999999999999954

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.93  E-value=2.8e-26  Score=249.19  Aligned_cols=196  Identities=22%  Similarity=0.361  Sum_probs=165.2

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCCh--------hhHHHHHHHHHHHHhcC---CcceeeEEEEEcc
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSE--------QGLAEFETEIEMLSKLR---HRHLVSLIGFCDE  580 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~~~  580 (851)
                      .+|...+.+|+|+||.|+.+.++. ...|+||.+.+..-        ...-....||++|+.|+   |+||+++++++++
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            458889999999999999998764 45678887765421        11123557999999997   9999999999999


Q ss_pred             CCcEEEEEEec-CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecc
Q 047215          581 QNEMILVYEYM-ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG  659 (851)
Q Consensus       581 ~~~~~lV~Ey~-~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFG  659 (851)
                      ++.+||+||-. ++-+|.+++..+  +.+++.+...|+.|++.|+++||+   ++|||||||-+||.++.+|-+||+|||
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~klidfg  715 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLIDFG  715 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEeecc
Confidence            99999999975 556899998544  569999999999999999999994   999999999999999999999999999


Q ss_pred             ccccCCCCCccccccccccCCcccCcccccccCC-CchHHHHHHHHHHHHHHhCCcCCC
Q 047215          660 LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVIN  717 (851)
Q Consensus       660 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDVwS~GvvL~eLltG~~p~~  717 (851)
                      .+...    .........||.+|.|||++.+.+| ...-|||++|++||.++....|+.
T Consensus       716 saa~~----ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  716 SAAYT----KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             chhhh----cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            98752    2233456789999999999998876 566899999999999988887765

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.92  E-value=2.5e-26  Score=246.45  Aligned_cols=272  Identities=23%  Similarity=0.274  Sum_probs=201.4

Q ss_pred             ccCHHHHHHHhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcC------CcceeeE
Q 047215          502 RFTLAEIRVATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR------HRHLVSL  574 (851)
Q Consensus       502 ~~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~------HpnIv~l  574 (851)
                      ++.+-|+.  ..+|.+..-.|+|-|++|.+|.. ..+..||||++...... .+.=..|+++|++|.      .-|+++|
T Consensus       423 rv~igE~L--D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl  499 (752)
T KOG0670|consen  423 RVRIGELL--DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRL  499 (752)
T ss_pred             EEehhhhh--cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHH
Confidence            34444443  47788888999999999999975 34678999999876444 344578999999995      3488999


Q ss_pred             EEEEccCCcEEEEEEecCCcchhhhccCC-CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-CCe
Q 047215          575 IGFCDEQNEMILVYEYMANGTLRSHLFGS-DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-NFV  652 (851)
Q Consensus       575 ~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~-~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-~~~  652 (851)
                      +-.|...+++|||+|-+. .+|.++|..- ..-.|....+...+.|+.-||..|.   +.+|+|.||||.|||+++ ...
T Consensus       500 ~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~i  575 (752)
T KOG0670|consen  500 FRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNI  575 (752)
T ss_pred             HHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcce
Confidence            999999999999999774 5899998542 2345778889999999999999999   699999999999999985 467


Q ss_pred             EEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHH
Q 047215          653 AKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM  732 (851)
Q Consensus       653 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~  732 (851)
                      +||||||.|......+.+    ...-+..|.|||++.+.+|+...|+||.||+||||.||+..|.+........+.--+.
T Consensus       576 LKLCDfGSA~~~~eneit----PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~K  651 (752)
T KOG0670|consen  576 LKLCDFGSASFASENEIT----PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELK  651 (752)
T ss_pred             eeeccCcccccccccccc----HHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhc
Confidence            999999998764332221    1223557999999999999999999999999999999999887755433222211110


Q ss_pred             -----HHhhhcccc---------------------------cccCc------cCCC--CCC---hhHHHHHHHHHHHhcc
Q 047215          733 -----KWQKQRSLK---------------------------SIIDP------HLKG--NYS---PESLEKFGEIAEKCLD  769 (851)
Q Consensus       733 -----~~~~~~~~~---------------------------~i~d~------~l~~--~~~---~~~~~~l~~l~~~Cl~  769 (851)
                           .+...+.+.                           ..+.|      .+..  .++   +.....+.+|+.+||.
T Consensus       652 Gk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~  731 (752)
T KOG0670|consen  652 GKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLI  731 (752)
T ss_pred             CCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhc
Confidence                 011111000                           00111      0111  122   3345678999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 047215          770 DEGKNRPTMGEVLWH  784 (851)
Q Consensus       770 ~dP~~RPt~~evl~~  784 (851)
                      .||++|.|..|+|.|
T Consensus       732 LdP~KRit~nqAL~H  746 (752)
T KOG0670|consen  732 LDPEKRITVNQALKH  746 (752)
T ss_pred             cChhhcCCHHHHhcC
Confidence            999999999999999

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1.2e-25  Score=224.01  Aligned_cols=244  Identities=19%  Similarity=0.361  Sum_probs=195.2

Q ss_pred             eeeeecceEEEEEEEcCcceeEEeec--CCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcchh
Q 047215          520 MIGVGGFGKVFKGEIEDCTLAAIKRA--NPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR  597 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~~~~~vavK~~--~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~  597 (851)
                      +|.+...|+.|+|++++...|| |++  .......-++|..|.-.|+.+.||||++++|.|.....+.++..||+.|+|.
T Consensus       197 kl~e~hsgelwrgrwqgndiva-kil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsly  275 (448)
T KOG0195|consen  197 KLAESHSGELWRGRWQGNDIVA-KILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLY  275 (448)
T ss_pred             hhccCCCcccccccccCcchhh-hhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHH
Confidence            6888999999999998876543 333  2234444578999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEe--eccccccCCCCCccccccc
Q 047215          598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMS--DFGLSKTGPSMEHTHVSTA  675 (851)
Q Consensus       598 ~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~--DFGla~~~~~~~~~~~~~~  675 (851)
                      ..|++...--.+-.+..++++++|+|++|||+ .++-|..--|.++.+++|++.+++|+  |--++..         ...
T Consensus       276 nvlhe~t~vvvd~sqav~faldiargmaflhs-lep~ipr~~lns~hvmidedltarismad~kfsfq---------e~g  345 (448)
T KOG0195|consen  276 NVLHEQTSVVVDHSQAVRFALDIARGMAFLHS-LEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ---------EVG  345 (448)
T ss_pred             HHHhcCccEEEecchHHHHHHHHHhhHHHHhh-cchhhhhhhcccceEEecchhhhheecccceeeee---------ccc
Confidence            99998876677888999999999999999997 34445555799999999999998875  2222111         111


Q ss_pred             cccCCcccCcccccccCCC---chHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCC
Q 047215          676 VKGSFGYLDPEYFWRQQLT---EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY  752 (851)
Q Consensus       676 ~~gt~~y~aPE~~~~~~~t---~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~  752 (851)
                      ..-.+.||+||.++..+-+   ..+|+|||.++||||.|...||.+..+.+-      .         .++.-..++..+
T Consensus       346 r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec------g---------mkialeglrv~i  410 (448)
T KOG0195|consen  346 RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC------G---------MKIALEGLRVHI  410 (448)
T ss_pred             cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh------h---------hhhhhccccccC
Confidence            1235789999999876543   579999999999999999999877655321      1         123334566778


Q ss_pred             ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       753 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                      ++..+..+.+|+.-|+..||.+||.+..++-.||.+.
T Consensus       411 ppgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  411 PPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             CCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            8888899999999999999999999999999988753

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.92  E-value=3e-25  Score=235.36  Aligned_cols=265  Identities=23%  Similarity=0.336  Sum_probs=195.7

Q ss_pred             HHHhcCCceeeeeeeecceEEEEEEEc----CcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCc
Q 047215          509 RVATNNFDESLMIGVGGFGKVFKGEIE----DCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNE  583 (851)
Q Consensus       509 ~~~t~~f~~~~~LG~G~fG~Vykg~~~----~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~  583 (851)
                      ....+.|..+++||+|.|++||++...    ....+|+|.+...+..  ....+|+++|.++ -|.||+++.+++...+.
T Consensus        32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~  109 (418)
T KOG1167|consen   32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGCFRNNDQ  109 (418)
T ss_pred             hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence            334567888999999999999999754    3567899998876544  4578999999999 59999999999999999


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc-CCCeEEEeeccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSK  662 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld-~~~~~kl~DFGla~  662 (851)
                      ..+|+||+++-...+++..     ++..++...++.+..||.++|   ..|||||||||.|+|.+ ..++-.|+|||||.
T Consensus       110 v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  110 VAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ  181 (418)
T ss_pred             eEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechhHH
Confidence            9999999999998888743     557788889999999999999   59999999999999997 55778999999997


Q ss_pred             cCC-----------------C-C----------------C--------ccccccccccCCcccCccccc-ccCCCchHHH
Q 047215          663 TGP-----------------S-M----------------E--------HTHVSTAVKGSFGYLDPEYFW-RQQLTEKSDV  699 (851)
Q Consensus       663 ~~~-----------------~-~----------------~--------~~~~~~~~~gt~~y~aPE~~~-~~~~t~ksDV  699 (851)
                      ...                 . .                .        .........||+||.|||++. ....+.++||
T Consensus       182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi  261 (418)
T KOG1167|consen  182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI  261 (418)
T ss_pred             HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence            100                 0 0                0        000112346999999999986 4567899999


Q ss_pred             HHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHH---------hhhcc--cc----------------cc-cCcc----
Q 047215          700 YSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW---------QKQRS--LK----------------SI-IDPH----  747 (851)
Q Consensus       700 wS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~---------~~~~~--~~----------------~i-~d~~----  747 (851)
                      ||.|||++.+++++.||...... ...+.+.+.-+         .-.+.  +.                .+ ....    
T Consensus       262 ws~GVI~Lslls~~~PFf~a~dd-~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~  340 (418)
T KOG1167|consen  262 WSAGVILLSLLSRRYPFFKAKDD-ADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSR  340 (418)
T ss_pred             eeccceeehhhccccccccCccc-cchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccc
Confidence            99999999999999998643221 11122211100         00011  00                00 0000    


Q ss_pred             ---CCCCCChh-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          748 ---LKGNYSPE-SLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       748 ---l~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                         +......+ .+..+.+++.+||+.||.+|.|++++|+|
T Consensus       341 q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH  381 (418)
T KOG1167|consen  341 QPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH  381 (418)
T ss_pred             ccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence               00011112 23368899999999999999999999999

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.92  E-value=6.1e-25  Score=219.35  Aligned_cols=251  Identities=21%  Similarity=0.323  Sum_probs=181.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEE-EccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGF-CDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~-~~~~~~~~lV~E  589 (851)
                      +.|.+.+.||+|.||.+-+++++. .+.+++|.+... ....++|.+|..---.| .|.||+.-++. ++..+.+.+++|
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE  102 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE  102 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence            467788899999999999999865 456677766543 33457899998765555 58999988875 567778899999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE-c-CCCeEEEeeccccccCCCC
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL-D-ENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl-d-~~~~~kl~DFGla~~~~~~  667 (851)
                      |+|.|+|..-+...   .+.+....+++.|++.|+.|+|+   +++||||||.+|||| + +..++||||||+.+.....
T Consensus       103 ~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t  176 (378)
T KOG1345|consen  103 FAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT  176 (378)
T ss_pred             cCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeecccccccCce
Confidence            99999999888553   36677888999999999999996   999999999999999 3 4458999999998753221


Q ss_pred             CccccccccccCCcccCccccccc-----CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQ-----QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~-----~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                           .....-+..|.+||.+...     ...+.+|||.||++++..+||+.||+.....+ ....+|..-..  +... 
T Consensus       177 -----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d-~~Y~~~~~w~~--rk~~-  247 (378)
T KOG1345|consen  177 -----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD-KPYWEWEQWLK--RKNP-  247 (378)
T ss_pred             -----ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC-chHHHHHHHhc--ccCc-
Confidence                 1223346679999987532     35678999999999999999999998543322 23333322111  1111 


Q ss_pred             ccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       743 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       .-|+.-..++    +.+.++.++-|..++++|-...++-++
T Consensus       248 -~~P~~F~~fs----~~a~r~Fkk~lt~~~~drcki~~~kk~  284 (378)
T KOG1345|consen  248 -ALPKKFNPFS----EKALRLFKKSLTPRFKDRCKIWTAKKM  284 (378)
T ss_pred             -cCchhhcccC----HHHHHHHHHhcCCcccccchhHHHHHH
Confidence             1122222333    346677788899999999655555443

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.91  E-value=1.7e-25  Score=274.84  Aligned_cols=199  Identities=19%  Similarity=0.227  Sum_probs=141.1

Q ss_pred             hcCC-cceeeEEEEE-------ccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeE
Q 047215          565 KLRH-RHLVSLIGFC-------DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGII  636 (851)
Q Consensus       565 ~l~H-pnIv~l~g~~-------~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~ii  636 (851)
                      .++| +||++++++|       .....+++++|++ .++|.++|... ...+++.+++.++.||++||+|||+   ++|+
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~---~gIv  102 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHS---QGIV  102 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHh---CCee
Confidence            4566 6888888887       3334678889987 55999999643 3468999999999999999999995   9999


Q ss_pred             EcCCCCCCeEEcCC-------------------CeEEEeeccccccCCCCCc--------------cccccccccCCccc
Q 047215          637 HRDVKTTNILLDEN-------------------FVAKMSDFGLSKTGPSMEH--------------THVSTAVKGSFGYL  683 (851)
Q Consensus       637 HrDlk~~NILld~~-------------------~~~kl~DFGla~~~~~~~~--------------~~~~~~~~gt~~y~  683 (851)
                      ||||||+||||+..                   +.+|++|||+++.......              ........||+.||
T Consensus       103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~  182 (793)
T PLN00181        103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT  182 (793)
T ss_pred             eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence            99999999999654                   4556666666653211000              00011235788999


Q ss_pred             CcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHH
Q 047215          684 DPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEI  763 (851)
Q Consensus       684 aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l  763 (851)
                      |||++.+..++.++|||||||+||||++|..|+....    ....    ...     .....+..     .........+
T Consensus       183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~----~~~~----~~~-----~~~~~~~~-----~~~~~~~~~~  244 (793)
T PLN00181        183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS----RTMS----SLR-----HRVLPPQI-----LLNWPKEASF  244 (793)
T ss_pred             ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH----HHHH----HHH-----HhhcChhh-----hhcCHHHHHH
Confidence            9999999999999999999999999999876643211    0000    100     00111111     1112345688


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHH
Q 047215          764 AEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       764 ~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      +.+||+.+|.+||++.|+++|..
T Consensus       245 ~~~~L~~~P~~Rps~~eil~h~~  267 (793)
T PLN00181        245 CLWLLHPEPSCRPSMSELLQSEF  267 (793)
T ss_pred             HHHhCCCChhhCcChHHHhhchh
Confidence            89999999999999999999843

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.90  E-value=1.3e-23  Score=210.07  Aligned_cols=168  Identities=22%  Similarity=0.225  Sum_probs=125.8

Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |+|.+++... ..++++.++..++.|+++||+|||+   .+      ||+|||++.++.+|+  ||+++.....      
T Consensus         1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~------   62 (176)
T smart00750        1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPE------   62 (176)
T ss_pred             CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeeccc------
Confidence            6899988643 3469999999999999999999995   44      999999999999999  9998764321      


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS  753 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  753 (851)
                       ...||+.|+|||++.+..++.++|||||||++|||++|+.|+........ .+..+......       .++.. ....
T Consensus        63 -~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~-~~~~~~~~~~~-------~~~~~-~~~~  132 (176)
T smart00750       63 -QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA-ILEILLNGMPA-------DDPRD-RSNL  132 (176)
T ss_pred             -cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH-HHHHHHHHhcc-------CCccc-cccH
Confidence             12588999999999999999999999999999999999999865332111 11111111000       00000 0111


Q ss_pred             hhHHH--HHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          754 PESLE--KFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       754 ~~~~~--~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                      .....  .+.+++.+||+.+|.+||++.|+++|+..+.
T Consensus       133 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750      133 ESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence            22333  6899999999999999999999999987653

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.87  E-value=6.9e-22  Score=217.14  Aligned_cols=167  Identities=20%  Similarity=0.137  Sum_probs=128.8

Q ss_pred             HHhcCCceeeeeeeecceEEEEEEEc--CcceeEEeecCCC-----ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC
Q 047215          510 VATNNFDESLMIGVGGFGKVFKGEIE--DCTLAAIKRANPQ-----SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN  582 (851)
Q Consensus       510 ~~t~~f~~~~~LG~G~fG~Vykg~~~--~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~  582 (851)
                      ...++|...+.||+|+||+||+|+..  ++..+|||++...     .......|.+|+++|++++|+|+++.+..+   +
T Consensus        15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---~   91 (365)
T PRK09188         15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---G   91 (365)
T ss_pred             cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---C
Confidence            34578999999999999999999864  4677899986533     122356799999999999999999543322   4


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCC-CCCCeEEcCCCeEEEeecccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDV-KTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDl-k~~NILld~~~~~kl~DFGla  661 (851)
                      ..+|||||+++++|....   .   .   ....++.+++++|.|||+   .+|+|||| ||+|||++.++.+||+|||++
T Consensus        92 ~~~LVmE~~~G~~L~~~~---~---~---~~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLiDFGlA  159 (365)
T PRK09188         92 KDGLVRGWTEGVPLHLAR---P---H---GDPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVIDFQLA  159 (365)
T ss_pred             CcEEEEEccCCCCHHHhC---c---c---chHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEEECccc
Confidence            579999999999996321   1   1   114678899999999995   89999999 999999999999999999999


Q ss_pred             ccCCCCCcc------ccccccccCCcccCccccccc
Q 047215          662 KTGPSMEHT------HVSTAVKGSFGYLDPEYFWRQ  691 (851)
Q Consensus       662 ~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~  691 (851)
                      +........      .......+++.|+|||.+...
T Consensus       160 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        160 SVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             eecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence            864332211      111356788999999998643

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.86  E-value=9.2e-21  Score=208.40  Aligned_cols=262  Identities=19%  Similarity=0.232  Sum_probs=196.5

Q ss_pred             CCceeeeeeeecceEEEEEEEcCc--ceeEEeecCCCChhhHHHHHHHHHHHHhcCC----cceeeEEEEE-ccCCcEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIEDC--TLAAIKRANPQSEQGLAEFETEIEMLSKLRH----RHLVSLIGFC-DEQNEMIL  586 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~~~--~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H----pnIv~l~g~~-~~~~~~~l  586 (851)
                      +|.+.++||+|+||.||++.....  ..+|+|............+..|+.++..+.+    +++..+++.. ..+...+|
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            789999999999999999986553  4678887665533333367889999999873    5888888888 57788899


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCC-----CeEEEeecccc
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN-----FVAKMSDFGLS  661 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~-----~~~kl~DFGla  661 (851)
                      ||+.+ +.+|.++........++..+.++|+.|++.+|++||+   .|++||||||.|+++...     ..+.|.|||++
T Consensus        99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla  174 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA  174 (322)
T ss_pred             EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence            99977 6699998755556789999999999999999999994   999999999999999754     46999999999


Q ss_pred             c--cCCCCCc-----ccc-ccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHH
Q 047215          662 K--TGPSMEH-----THV-STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMK  733 (851)
Q Consensus       662 ~--~~~~~~~-----~~~-~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~  733 (851)
                      +  .......     .+. .....||..|+++++..+...+.+.|+||++.++.|++.|..||...........   ...
T Consensus       175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~---~~~  251 (322)
T KOG1164|consen  175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSK---FEK  251 (322)
T ss_pred             ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHH---HHH
Confidence            8  3211111     111 1245599999999999999999999999999999999999988865433221100   111


Q ss_pred             HhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          734 WQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       734 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      .....    ....     .....+..+.++...+-..+..++|....+...|......
T Consensus       252 ~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~  300 (322)
T KOG1164|consen  252 DPRKL----LTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS  300 (322)
T ss_pred             Hhhhh----cccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence            10000    1110     2233445577777777778999999999998887766543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=5.6e-22  Score=231.77  Aligned_cols=260  Identities=23%  Similarity=0.281  Sum_probs=191.4

Q ss_pred             eeeeeeeecceEEEEEEEc-CcceeEEeecC----C-CChhhH-HHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          517 ESLMIGVGGFGKVFKGEIE-DCTLAAIKRAN----P-QSEQGL-AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       517 ~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~----~-~~~~~~-~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ...++|.|.+|.|+..... .......|...    . ...... ..+..|+.+-..++|||++..+..+.+.....-.||
T Consensus       322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE  401 (601)
T KOG0590|consen  322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME  401 (601)
T ss_pred             ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence            3557999999977766532 22222222211    1 111111 226678888889999999988888877777766799


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC--CC
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP--SM  667 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~--~~  667 (851)
                      |+++ +|..++...  ..++..++..++.|+..|+.|||+   .||.|||+|++|+++..++.+||+|||.+....  ..
T Consensus       402 ~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e  475 (601)
T KOG0590|consen  402 YCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE  475 (601)
T ss_pred             cccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence            9999 999998543  357888999999999999999995   999999999999999999999999999986533  22


Q ss_pred             CccccccccccCCcccCcccccccCCCch-HHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEK-SDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~k-sDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      .........+|+..|+|||.+.+..|++. .||||.|+++..|.+|+.||......++..        .........-..
T Consensus       476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~--------~~~~~~~~~~~~  547 (601)
T KOG0590|consen  476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF--------KTNNYSDQRNIF  547 (601)
T ss_pred             hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch--------hhhccccccccc
Confidence            23356677889999999999999999874 799999999999999999987654433221        000000000011


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      .-........+...+.++.++|+.+|.+|.|+++|++.         +|++..
T Consensus       548 ~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d---------~W~~~i  591 (601)
T KOG0590|consen  548 EGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND---------EWIRSI  591 (601)
T ss_pred             cChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC---------hHhhhc
Confidence            11112224556678899999999999999999999998         898753

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.84  E-value=1.3e-19  Score=196.67  Aligned_cols=261  Identities=28%  Similarity=0.422  Sum_probs=195.4

Q ss_pred             CceeeeeeeecceEEEEEEEcCcceeEEeecCCCChh---hHHHHHHHHHHHHhcCCc-ceeeEEEEEccCCcEEEEEEe
Q 047215          515 FDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQ---GLAEFETEIEMLSKLRHR-HLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~---~~~~~~~Ei~~l~~l~Hp-nIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      |...+.||.|+||.||++...  ..+++|.+......   ....+.+|+.+++.+.|+ +++++.+.+......++++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            566778999999999999877  66788877655322   467899999999999988 799999999777778999999


Q ss_pred             cCCcchhhhccCCCC-CCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC-eEEEeeccccccCCCCC
Q 047215          591 MANGTLRSHLFGSDL-PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSME  668 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~-~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~-~~kl~DFGla~~~~~~~  668 (851)
                      +.+++|.+++..... ..+.......+..|++.++.|+|+   .+++|||+||+||+++..+ .++++|||+++......
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~  156 (384)
T COG0515          80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG  156 (384)
T ss_pred             CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence            999999966644321 268889999999999999999995   8899999999999999888 79999999987533322


Q ss_pred             cc----ccccccccCCcccCcccccc---cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc
Q 047215          669 HT----HVSTAVKGSFGYLDPEYFWR---QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK  741 (851)
Q Consensus       669 ~~----~~~~~~~gt~~y~aPE~~~~---~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  741 (851)
                      ..    .......|+..|++||.+.+   ..+....|+||+|++++++++|..|+.......   ...............
T Consensus       157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~  233 (384)
T COG0515         157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSS---ATSQTLKIILELPTP  233 (384)
T ss_pred             ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccc---cHHHHHHHHHhcCCc
Confidence            11    12456779999999999987   688999999999999999999999865443210   000011111110000


Q ss_pred             cccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          742 SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       742 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       .................+.+++..|+..+|..|.++.+...+
T Consensus       234 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         234 -SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             -ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence             000011100012223568899999999999999999888776

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.79  E-value=2.7e-19  Score=199.96  Aligned_cols=218  Identities=23%  Similarity=0.379  Sum_probs=162.7

Q ss_pred             HHhcCCcceeeEEEEEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCC
Q 047215          563 LSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT  642 (851)
Q Consensus       563 l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~  642 (851)
                      |+.+.|.|+.+++|.|..+...+.|.+||..|+|+|.+.... ..++|.....+.+++++||.|||+  ..-..|+.+++
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~-~~~d~~F~~s~~rdi~~Gl~ylh~--s~i~~hg~l~s   77 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED-IKLDYFFILSFIRDISKGLAYLHN--SPIGYHGALKS   77 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc-cCccHHHHHHHHHHHHHHHHHHhc--Ccceeeeeecc
Confidence            456899999999999999999999999999999999997643 568999999999999999999996  33339999999


Q ss_pred             CCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCccccccc-------CCCchHHHHHHHHHHHHHHhCCcC
Q 047215          643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ-------QLTEKSDVYSFGVVLFEVVCARAV  715 (851)
Q Consensus       643 ~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~t~ksDVwS~GvvL~eLltG~~p  715 (851)
                      +|+++|..+.+||+|||+.................-...|.|||.++..       ..+.+.||||||++++|+++.+.|
T Consensus        78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~  157 (484)
T KOG1023|consen   78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP  157 (484)
T ss_pred             ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence            9999999999999999998765321111111222234579999999753       257789999999999999999999


Q ss_pred             CCCCCCcch-hcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          716 INPTLPKDQ-INLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       716 ~~~~~~~~~-~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      |........ ..++..+..     .....+-|.+...  .+..+.+..++..||..+|.+||+++++-..++.+..
T Consensus       158 ~~~~~~~~~~~eii~~~~~-----~~~~~~rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~  226 (484)
T KOG1023|consen  158 FDLRNLVEDPDEIILRVKK-----GGSNPFRPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK  226 (484)
T ss_pred             cccccccCChHHHHHHHHh-----cCCCCcCcchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence            876332221 122222111     1111122222111  1445578999999999999999999999877665543

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.79  E-value=1e-18  Score=172.42  Aligned_cols=254  Identities=18%  Similarity=0.209  Sum_probs=190.0

Q ss_pred             hcCCceeeeeeeecceEEEEEE-EcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCC-cceeeEEEEEccCCcEEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRH-RHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~-~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H-pnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .++|..+++||.|+||.+|.|. ..+|..||||.-+.....  ..+.-|.++.+.|+| ..|..+..+..+...-.||||
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd   91 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD   91 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence            4689999999999999999997 578899999987765433  356778999999975 677777778888889999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc---CCCeEEEeeccccccCCC
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld---~~~~~kl~DFGla~~~~~  666 (851)
                      .+ +-+|.++..-.. ..++.++++-++-|++.-++|+|   .+++|||||||+|+|..   ....+.++||||++...+
T Consensus        92 LL-GPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d  166 (341)
T KOG1163|consen   92 LL-GPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD  166 (341)
T ss_pred             cc-CccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence            88 568888764322 35888999999999999999999   59999999999999996   345789999999986433


Q ss_pred             CCcc-----ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc
Q 047215          667 MEHT-----HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK  741 (851)
Q Consensus       667 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  741 (851)
                      ....     +......||.+|.+-....+...+.+.|+=|+|.+|..+..|..||++..+.......+...+.+..-.+.
T Consensus       167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie  246 (341)
T KOG1163|consen  167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIE  246 (341)
T ss_pred             ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHH
Confidence            2211     12345679999999888878888899999999999999999999999876654432222222111111000


Q ss_pred             cccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHH
Q 047215          742 SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEV  781 (851)
Q Consensus       742 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev  781 (851)
                           .+-    ...+.++.-.+.-|-..--++-|...-+
T Consensus       247 -----~LC----~G~P~EF~myl~Y~R~L~F~E~Pdy~yl  277 (341)
T KOG1163|consen  247 -----VLC----KGFPAEFAMYLNYCRGLGFEEKPDYMYL  277 (341)
T ss_pred             -----HHh----CCCcHHHHHHHHHHhhcCCCCCCcHHHH
Confidence                 111    1223457777778877777777875443

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.79  E-value=2.8e-18  Score=176.50  Aligned_cols=262  Identities=17%  Similarity=0.208  Sum_probs=192.0

Q ss_pred             cCCceeeeeeeecceEEEEEE-EcCcceeEEeecCCCChhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~-~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      -+|.+.++||+|+||..+.|+ +-++.+||||.-...++  ..++..|.+..+.|. .++|...+-+-.++.+-.||+|.
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL  105 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL  105 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence            367788899999999999997 46788999998765543  346778999999885 68999998888888899999998


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-----CCeEEEeeccccccCC
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-----NFVAKMSDFGLSKTGP  665 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-----~~~~kl~DFGla~~~~  665 (851)
                      + +-+|.|+..-.. ..++.+.++.||.|++.-++|+|+   +.+|.|||||+|+||..     ...+.|+|||+|+...
T Consensus       106 L-GPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr  180 (449)
T KOG1165|consen  106 L-GPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR  180 (449)
T ss_pred             h-CcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence            8 558877763333 358999999999999999999995   99999999999999953     4468999999998754


Q ss_pred             CCCcc-----ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc
Q 047215          666 SMEHT-----HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL  740 (851)
Q Consensus       666 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  740 (851)
                      +....     +......||.+||+-....+..-+.+-|+=|+|-+++..|.|..||++.........-+.....++...+
T Consensus       181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i  260 (449)
T KOG1165|consen  181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPI  260 (449)
T ss_pred             CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCH
Confidence            43221     2345677999999999999999999999999999999999999999986544322111111111111111


Q ss_pred             ccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       741 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ..+         .+..+.++..-+.-.-..+-.+-|..+-+...+..+++
T Consensus       261 ~~L---------c~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld  301 (449)
T KOG1165|consen  261 EVL---------CEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD  301 (449)
T ss_pred             HHH---------HhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence            111         11223445555555555666677876655555555543

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.78  E-value=3.2e-19  Score=182.68  Aligned_cols=171  Identities=16%  Similarity=0.164  Sum_probs=132.3

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhH---HH------HHHHHHHHHhcCCcceeeEEEEEcc-
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGL---AE------FETEIEMLSKLRHRHLVSLIGFCDE-  580 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~---~~------~~~Ei~~l~~l~HpnIv~l~g~~~~-  580 (851)
                      ..++|...++||.|+||.||.... ++..+++|.+.+......   ..      +.+|+..+.++.||+|..+..++.. 
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~  107 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA  107 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence            468999999999999999999765 456799999876532222   22      6899999999999999999887542 


Q ss_pred             -------CCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeE
Q 047215          581 -------QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA  653 (851)
Q Consensus       581 -------~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~  653 (851)
                             .+..+|+|||++|.+|.++..      ++.    ....+++.+|..||   ..+++|||+||+||++++++ +
T Consensus       108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i  173 (232)
T PRK10359        108 ERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG-L  173 (232)
T ss_pred             ccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC-E
Confidence                   246899999999999987731      222    24568999999999   49999999999999999888 9


Q ss_pred             EEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHH
Q 047215          654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV  710 (851)
Q Consensus       654 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLl  710 (851)
                      +|+|||..+........              ..+.....+..++|+||||+.+.-+.
T Consensus       174 ~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        174 RIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             EEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence            99999987653211110              11344556778999999999887653

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.78  E-value=3.9e-20  Score=214.68  Aligned_cols=246  Identities=19%  Similarity=0.235  Sum_probs=182.0

Q ss_pred             CCceeeeeeeecceEEEEEEEcCcceeEEeecCCCC-hhhHHHHHHHHHHHH--hcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          514 NFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQS-EQGLAEFETEIEMLS--KLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~--~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +++..+.||.+.|=+|.+|+.++|. ++||++.+.. .-....|.++++-++  .++|||.+++.-+-..+...|||-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            6777888999999999999988887 7888766543 444555655554444  45899999999888888888999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC-CCc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS-MEH  669 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~-~~~  669 (851)
                      ..+ +|.|.|  +.++-+...+...|+.|++.||..+|   +.+|+|||||.+||||+.-.-+.|+||.--+.... .+.
T Consensus       103 vkh-nLyDRl--STRPFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN  176 (1431)
T KOG1240|consen  103 VKH-NLYDRL--STRPFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN  176 (1431)
T ss_pred             Hhh-hhhhhh--ccchHHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence            866 899988  55567888899999999999999999   59999999999999999988999999987664321 111


Q ss_pred             cc----cccccccCCcccCccccccc-----------CCCchHHHHHHHHHHHHHHhC-CcCCCCCCCcchhcHHHHHHH
Q 047215          670 TH----VSTAVKGSFGYLDPEYFWRQ-----------QLTEKSDVYSFGVVLFEVVCA-RAVINPTLPKDQINLADWAMK  733 (851)
Q Consensus       670 ~~----~~~~~~gt~~y~aPE~~~~~-----------~~t~ksDVwS~GvvL~eLltG-~~p~~~~~~~~~~~l~~~~~~  733 (851)
                      ..    ...+...-.+|+|||.+...           ..+++.||||+||++.||++- +++|.-.      .+...-..
T Consensus       177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS------QL~aYr~~  250 (1431)
T KOG1240|consen  177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS------QLLAYRSG  250 (1431)
T ss_pred             cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH------HHHhHhcc
Confidence            11    11222334579999988531           278899999999999999985 5555421      11111000


Q ss_pred             --HhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          734 --WQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       734 --~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                        ...+.-+..|-|+            .++.++..|++.||++|.++++.|+.
T Consensus       251 ~~~~~e~~Le~Ied~------------~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  251 NADDPEQLLEKIEDV------------SLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             CccCHHHHHHhCcCc------------cHHHHHHHHHccCchhccCHHHHHHh
Confidence              0001112222222            47899999999999999999999988

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.78  E-value=4.7e-19  Score=179.10  Aligned_cols=138  Identities=16%  Similarity=0.126  Sum_probs=106.6

Q ss_pred             eeeeeecceEEEEEEEcCcceeEEeecCCCChh--h-------HH-----------------HHHHHHHHHHhcCCccee
Q 047215          519 LMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQ--G-------LA-----------------EFETEIEMLSKLRHRHLV  572 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~--~-------~~-----------------~~~~Ei~~l~~l~HpnIv  572 (851)
                      +.||+|+||.||+|...+|+.+|||++......  .       ..                 ....|++.+.++.|+++.
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~   82 (190)
T cd05147           3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP   82 (190)
T ss_pred             CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            579999999999999888899999988654211  0       11                 223499999999887764


Q ss_pred             eEEEEEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe
Q 047215          573 SLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV  652 (851)
Q Consensus       573 ~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~  652 (851)
                      ....+..  ...+|||||++++++...+..  ..++++.+...++.|++.+|.|||+  ..+|+||||||+|||++ ++.
T Consensus        83 ~p~~~~~--~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H--~~giiHrDlkP~NIli~-~~~  155 (190)
T cd05147          83 CPEPILL--KSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQ--DCRLVHADLSEYNLLYH-DGK  155 (190)
T ss_pred             CCcEEEe--cCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHH--hCCcccCCCCHHHEEEE-CCc
Confidence            4333322  223899999999877654322  2468889999999999999999942  48999999999999998 478


Q ss_pred             EEEeecccccc
Q 047215          653 AKMSDFGLSKT  663 (851)
Q Consensus       653 ~kl~DFGla~~  663 (851)
                      ++|+|||++..
T Consensus       156 v~LiDFG~a~~  166 (190)
T cd05147         156 LYIIDVSQSVE  166 (190)
T ss_pred             EEEEEcccccc
Confidence            99999999874

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.76  E-value=4.6e-18  Score=172.31  Aligned_cols=140  Identities=19%  Similarity=0.160  Sum_probs=110.1

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCChh--------------------------hHHHHHHHHHHHHhcCCcce
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQ--------------------------GLAEFETEIEMLSKLRHRHL  571 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~Ei~~l~~l~HpnI  571 (851)
                      .+.||+|+||.||+|+..+|+.+|||+.......                          ....+..|.+.+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            3579999999999999878899999987754211                          01224679999999999987


Q ss_pred             eeEEEEEccCCcEEEEEEecCCcchhhh-ccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCC
Q 047215          572 VSLIGFCDEQNEMILVYEYMANGTLRSH-LFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN  650 (851)
Q Consensus       572 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~-L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~  650 (851)
                      .....+...  ..+|||||++++++... +..   .+++..+..+++.|++.+|.+||+  ..+|+||||||+|||++ +
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~--~~givHrDlkP~NIll~-~  153 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQ--EAGLVHGDLSEYNILYH-D  153 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHH--hCCEecCCCChhhEEEE-C
Confidence            554444332  24899999998865433 322   356778899999999999999994  48999999999999999 8


Q ss_pred             CeEEEeeccccccCC
Q 047215          651 FVAKMSDFGLSKTGP  665 (851)
Q Consensus       651 ~~~kl~DFGla~~~~  665 (851)
                      +.++|+|||++....
T Consensus       154 ~~~~liDFG~a~~~~  168 (190)
T cd05145         154 GKPYIIDVSQAVELD  168 (190)
T ss_pred             CCEEEEEcccceecC
Confidence            899999999997643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.75  E-value=1.6e-17  Score=166.47  Aligned_cols=186  Identities=17%  Similarity=0.109  Sum_probs=137.1

Q ss_pred             eeeeeeeecceEEEEEEEcCcceeEEeecCCCChh----hHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEEEEEec
Q 047215          517 ESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQ----GLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       517 ~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~----~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      ....|++|+||+||.+.- .+..++.+.+......    ....|.+|+++|++|. |+++++++++    +..+++|||+
T Consensus         6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI   80 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL   80 (218)
T ss_pred             cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence            456799999999997765 4455565555543321    1225889999999995 5889999987    4579999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCC-CCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDV-KTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDl-k~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      ++.+|...+..         ....++.|++.+|.++|+   .||+|||| ||.|||++.++.++|+|||++.........
T Consensus        81 ~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~  148 (218)
T PRK12274         81 AGAAMYQRPPR---------GDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW  148 (218)
T ss_pred             cCccHHhhhhh---------hhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence            99998754311         123577899999999995   99999999 799999999999999999999854332210


Q ss_pred             -------cc----ccccccCCcccCccccccc-CCC-chHHHHHHHHHHHHHHhCCcCCCCC
Q 047215          671 -------HV----STAVKGSFGYLDPEYFWRQ-QLT-EKSDVYSFGVVLFEVVCARAVINPT  719 (851)
Q Consensus       671 -------~~----~~~~~gt~~y~aPE~~~~~-~~t-~ksDVwS~GvvL~eLltG~~p~~~~  719 (851)
                             +.    ......++.|++|+..... ..+ ...+.++-|.-+|.++|++.+....
T Consensus       149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence                   00    1123367888888865432 233 6789999999999999999775443

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.75  E-value=1.7e-17  Score=174.96  Aligned_cols=230  Identities=19%  Similarity=0.276  Sum_probs=147.6

Q ss_pred             ceeeeeeeecceEEEEEEEcC-cceeEEeecCCC---ChhhHHHHHHHHHHHHhcC----------CcceeeEEEEEc--
Q 047215          516 DESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQ---SEQGLAEFETEIEMLSKLR----------HRHLVSLIGFCD--  579 (851)
Q Consensus       516 ~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~----------HpnIv~l~g~~~--  579 (851)
                      ...+.||.|+++.||.++..+ ++..++|.....   .....+.+++|.-....+.          |-.++-.++...  
T Consensus        15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~   94 (288)
T PF14531_consen   15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP   94 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred             EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence            345689999999999999765 678888875432   3445677777776655533          222332222221  


Q ss_pred             -------cC---C-----cEEEEEEecCCcchhhhcc---CC--CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcC
Q 047215          580 -------EQ---N-----EMILVYEYMANGTLRSHLF---GS--DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD  639 (851)
Q Consensus       580 -------~~---~-----~~~lV~Ey~~~gsL~~~L~---~~--~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrD  639 (851)
                             ..   .     ..+++|+-+ .++|.+++.   ..  ....+....++.+..|+++.+++||+   .|++|+|
T Consensus        95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVHgd  170 (288)
T PF14531_consen   95 GKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS---YGLVHGD  170 (288)
T ss_dssp             TS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEEEST
T ss_pred             CCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh---cceEecc
Confidence                   11   1     236777777 468877753   21  12234455667788999999999996   9999999


Q ss_pred             CCCCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCccccccc--------CCCchHHHHHHHHHHHHHHh
Q 047215          640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ--------QLTEKSDVYSFGVVLFEVVC  711 (851)
Q Consensus       640 lk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~t~ksDVwS~GvvL~eLlt  711 (851)
                      |||+|++++.+|.++|+||+.......    .... ...+..|.+||.....        .++.+.|.|++|+++|.|+|
T Consensus       171 i~~~nfll~~~G~v~Lg~F~~~~r~g~----~~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC  245 (288)
T PF14531_consen  171 IKPENFLLDQDGGVFLGDFSSLVRAGT----RYRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC  245 (288)
T ss_dssp             -SGGGEEE-TTS-EEE--GGGEEETTE----EEEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred             cceeeEEEcCCCCEEEcChHHHeecCc----eeec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence            999999999999999999988765221    1111 2345789999987542        58899999999999999999


Q ss_pred             CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCC
Q 047215          712 ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR  775 (851)
Q Consensus       712 G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R  775 (851)
                      ++.|+....+......                   .+ ..+. +.++.++.|+..+|+.+|.+|
T Consensus       246 ~~lPf~~~~~~~~~~~-------------------~f-~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  246 GRLPFGLSSPEADPEW-------------------DF-SRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             SS-STCCCGGGSTSGG-------------------GG-TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             ccCCCCCCCccccccc-------------------cc-hhcC-CcCHHHHHHHHHHccCCcccC
Confidence            9999986543321110                   11 1233 677889999999999999988

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.74  E-value=1.1e-17  Score=199.11  Aligned_cols=202  Identities=22%  Similarity=0.214  Sum_probs=163.9

Q ss_pred             HHHHHHHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcC---CcceeeEEEEEccC
Q 047215          505 LAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR---HRHLVSLIGFCDEQ  581 (851)
Q Consensus       505 ~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~~~~  581 (851)
                      ..+.+.....|.+.+.||+|+||+||+|...+++.+|+|.-++.+...   |--=.+++.||+   -+.|..+...+.-.
T Consensus       690 ~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~  766 (974)
T KOG1166|consen  690 NTEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQ  766 (974)
T ss_pred             cceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccC
Confidence            344555667899999999999999999998889999999988876543   222233445555   23344444444566


Q ss_pred             CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc-------CCCeEE
Q 047215          582 NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-------ENFVAK  654 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld-------~~~~~k  654 (851)
                      +.-+||+||.+.|+|.+++.  ..+-++|.-.+.++.|+++-+++||   ..+|||+||||.|+||.       ++.-++
T Consensus       767 ~~S~lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~  841 (974)
T KOG1166|consen  767 NASVLVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLY  841 (974)
T ss_pred             CcceeeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceE
Confidence            77899999999999999996  4456899999999999999999999   59999999999999993       345699


Q ss_pred             EeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCc
Q 047215          655 MSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA  714 (851)
Q Consensus       655 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~  714 (851)
                      |+|||.+-.+............++|-.+-.+|+..+++++..+|.|.+.-+++.||-|+.
T Consensus       842 lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  842 LIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             EEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence            999999876544444445677889999999999999999999999999999999999974

>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan

Probab=99.73  E-value=2.3e-18  Score=170.80  Aligned_cols=139  Identities=31%  Similarity=0.490  Sum_probs=84.2

Q ss_pred             EEEEEecCCCCCcCCCCcccccccccCCCcccccCCCcccccCcceEec-cCCCccccchhhHHHhhccCCCcccccccc
Q 047215          219 TMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAGSEIRNSSNITYA-STNDSSVAPLLVYETARTMSNTEVLEKRFN  297 (851)
Q Consensus       219 ~~~Rin~Gg~~~~~~~d~~~~r~W~~d~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~P~~vy~tA~~~~~~~~~~~~~~  297 (851)
                      .++||||||+..+    +.....|++|..|..+................ ......+.++.||||+|.+..        +
T Consensus         1 ~~~~IN~Gg~~~~----~~~g~~w~~D~~~~~g~~~y~~~~~~~~~~~~~~~~i~~t~d~~Lyqt~R~g~~--------~   68 (174)
T PF11721_consen    1 VVLRINAGGPAYT----DSSGIVWEADQYYTGGSWGYYVSSDNNGSTSSTNSSIPGTTDDPLYQTERYGPS--------S   68 (174)
T ss_dssp             EEEEEEETSSSEE----ETTTEEE-SSSSSTTSS-----------SSTTS--TTS-HHHHHTTT-----SS--------S
T ss_pred             CEEEEECCCCccc----CCCCCEEcCCCCCCCCCcccccccccccccccccccccCCCchhhhHhhcCCCC--------c
Confidence            4789999999862    34556799998875443311000000000001 112245678899999999533        4


Q ss_pred             eeeeeecCCCCceEEEEEeeeEEEec------CCeEEEEEEEcCccccCCcchhhhcCCCCceeEEEeE-eccccccee
Q 047215          298 MSWKFEVDPNFDYFVRLHFCELVYEK------ANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYF-DAVSSKIET  369 (851)
Q Consensus       298 lt~~~~vd~~~~Y~v~LhF~Ei~~~~------~~~R~FdI~in~~~~~~~~di~~~~~~~~~~~~~~~~-~~~~~~~~~  369 (851)
                      |+|.+|+.+++.|.|+|||||++...      .|+|+|||+|||++++++|||...+|+...+.++.+. ..+.++.+.
T Consensus        69 f~Y~ip~~~~G~Y~V~L~FaE~~~~~~~~~~~~G~RvFdV~v~g~~vl~~~Di~~~~G~~~~~~~~~~~~v~v~dg~L~  147 (174)
T PF11721_consen   69 FSYDIPVVPNGTYTVRLHFAELYFGASGGASGPGQRVFDVYVNGETVLKNFDIYAEAGGFNKAAVRRFFNVTVTDGTLN  147 (174)
T ss_dssp             EEEEEE--S-EEEEEEEEEE-SSS--------SSSS-EEEEETTEEEEEEE-HHHHHSSSS---EEEEEEEEEETTEEE
T ss_pred             eEEEEecCCCcEEEEEEEeccccccccccccCCCceEEEEEecceEEEeccCHHHHcCCCceEEEEEEEEEEEeCCcEE
Confidence            99999965999999999999997766      8999999999999999999999999988778888773 455666655

It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan [. This entry represents a malectin domain, and can also be found in probable receptor-like serine/threonine-protein kinases from plants [] and in proteins described as glycoside hydrolases. ; PDB: 2KR2_A 2JWP_A 2K46_A.

>PRK10345 hypothetical protein; Provisional

Probab=99.72  E-value=3.4e-17  Score=167.22  Aligned_cols=135  Identities=16%  Similarity=0.180  Sum_probs=105.3

Q ss_pred             eeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhc-----CCcceeeEEEEEccCC---c-EEEE
Q 047215          517 ESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-----RHRHLVSLIGFCDEQN---E-MILV  587 (851)
Q Consensus       517 ~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-----~HpnIv~l~g~~~~~~---~-~~lV  587 (851)
                      ..++||+|+||.||.  .......+||+.........+.+.+|+.+++++     +||||++++|+++++.   . ..+|
T Consensus         6 ~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          6 EQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             CcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            356899999999996  333333478887765455567899999999999     5799999999998763   3 3478


Q ss_pred             EEe--cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHH-HHhhcCCCCCeEEcCCCCCCeEEcC----CCeEEEeeccc
Q 047215          588 YEY--MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGL-HYLHTGAERGIIHRDVKTTNILLDE----NFVAKMSDFGL  660 (851)
Q Consensus       588 ~Ey--~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL-~yLHs~~~~~iiHrDlk~~NILld~----~~~~kl~DFGl  660 (851)
                      +||  +++|+|.+++...   .+++.  ..++.+++.++ +|||+   ++|+||||||+|||++.    +.+++|+||+.
T Consensus        84 ~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G  155 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIPVVCDNIG  155 (210)
T ss_pred             ecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence            999  6689999999543   24444  35677888777 99995   99999999999999963    34899999554


Q ss_pred             c
Q 047215          661 S  661 (851)
Q Consensus       661 a  661 (851)
                      +
T Consensus       156 ~  156 (210)
T PRK10345        156 E  156 (210)
T ss_pred             C
Confidence            4

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.72  E-value=2e-18  Score=192.52  Aligned_cols=225  Identities=24%  Similarity=0.278  Sum_probs=176.3

Q ss_pred             eeeeecceEEEEEE----EcCcceeEEeecCCCChhh--HHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEEEEEecC
Q 047215          520 MIGVGGFGKVFKGE----IEDCTLAAIKRANPQSEQG--LAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       520 ~LG~G~fG~Vykg~----~~~~~~vavK~~~~~~~~~--~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      .+|+|.||.|+..+    .+.+..+++|.........  ......|-.++..++ ||.+|++.-.++.+...+++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            37999999998753    3445666777655432211  114556888888886 9999999999999999999999999


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccc
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~  672 (851)
                      +|+|...+....  .++..........++-+++++|   +.+++|||+|++||+++.+|.+++.|||+++.....+.   
T Consensus        81 gg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~---  152 (612)
T KOG0603|consen   81 GGDLFTRLSKEV--MFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI---  152 (612)
T ss_pred             cchhhhccccCC--chHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhh---
Confidence            999998885543  4666777777788899999999   59999999999999999999999999999986332221   


Q ss_pred             ccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCC
Q 047215          673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY  752 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~  752 (851)
                         .|||..|||||+++  .....+|.||||++++||+||-.||..    +.      .         ..|.  +.....
T Consensus       153 ---~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~------~---------~~Il--~~~~~~  206 (612)
T KOG0603|consen  153 ---ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DT------M---------KRIL--KAELEM  206 (612)
T ss_pred             ---cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HH------H---------HHHh--hhccCC
Confidence               28999999999998  567889999999999999999988875    10      1         1111  112245


Q ss_pred             ChhHHHHHHHHHHHhcccCCCCCCCH
Q 047215          753 SPESLEKFGEIAEKCLDDEGKNRPTM  778 (851)
Q Consensus       753 ~~~~~~~l~~l~~~Cl~~dP~~RPt~  778 (851)
                      +.+....++.++..++..+|..|--.
T Consensus       207 p~~l~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  207 PRELSAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             chhhhHHHHHHHHHHHhhCHHHHhcc
Confidence            66777788899999999999999754

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=5.8e-17  Score=170.17  Aligned_cols=213  Identities=16%  Similarity=0.178  Sum_probs=151.3

Q ss_pred             CCcceeeEEEEEcc---------------------------CCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHH
Q 047215          567 RHRHLVSLIGFCDE---------------------------QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIG  619 (851)
Q Consensus       567 ~HpnIv~l~g~~~~---------------------------~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~  619 (851)
                      +|||||++.+.|.+                           +..+|+||.-.+. +|+++|..+.   .+.....-|+.|
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~---~s~r~~~~~laQ  349 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH---RSYRTGRVILAQ  349 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC---CchHHHHHHHHH
Confidence            59999999876532                           2357899988766 8998885543   455677778999


Q ss_pred             HHHHHHHhhcCCCCCeEEcCCCCCCeEE--cCC--CeEEEeeccccccCCCC----CccccccccccCCcccCccccccc
Q 047215          620 AARGLHYLHTGAERGIIHRDVKTTNILL--DEN--FVAKMSDFGLSKTGPSM----EHTHVSTAVKGSFGYLDPEYFWRQ  691 (851)
Q Consensus       620 ia~gL~yLHs~~~~~iiHrDlk~~NILl--d~~--~~~kl~DFGla~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~  691 (851)
                      +++|+.|||   +++|.|||+|+.||||  |++  -...|+|||++-.....    ......-..-|...-||||+....
T Consensus       350 lLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~  426 (598)
T KOG4158|consen  350 LLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV  426 (598)
T ss_pred             HHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence            999999999   6999999999999999  333  35789999997543221    111111233477789999998643


Q ss_pred             C------CCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHH
Q 047215          692 Q------LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAE  765 (851)
Q Consensus       692 ~------~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~  765 (851)
                      +      --.|+|.|+.|.+.||+++...||...... ..+..          ..++    ...+..+..++..+++++.
T Consensus       427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem-~L~~r----------~Yqe----~qLPalp~~vpp~~rqlV~  491 (598)
T KOG4158|consen  427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM-LLDTR----------TYQE----SQLPALPSRVPPVARQLVF  491 (598)
T ss_pred             CCCceeeccchhhhhhhhhhHHHHhccCCcccccchh-eechh----------hhhh----hhCCCCcccCChHHHHHHH
Confidence            2      125899999999999999999999862111 01110          0111    1112345667778999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCCC
Q 047215          766 KCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDR  801 (851)
Q Consensus       766 ~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~~  801 (851)
                      ..|+.||++|++..-+...|.--+.....|......
T Consensus       492 ~lL~r~pskRvsp~iAANvl~LsLw~~~~~vka~~~  527 (598)
T KOG4158|consen  492 DLLKRDPSKRVSPNIAANVLNLSLWRMGEDVKAMME  527 (598)
T ss_pred             HHhcCCccccCCccHHHhHHHHHHhcCchHHHHhcc
Confidence            999999999999887777777666666677654433

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.66  E-value=4.4e-16  Score=160.51  Aligned_cols=134  Identities=23%  Similarity=0.335  Sum_probs=111.6

Q ss_pred             eeeeeecceEEEEEEEcCcceeEEeecCCCCh--------hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          519 LMIGVGGFGKVFKGEIEDCTLAAIKRANPQSE--------QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +.||+|++|.||+|.. .+..+++|+......        .....+.+|+.++..++|+++.....++...+..+++|||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            4699999999999987 455677887553321        1124578899999999999998888787777888999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      +++++|.+++....     + ++..++.+++.+|.+||+   .+++|||++|.|||++ ++.++|+|||+++.
T Consensus        81 ~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         81 IEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             eCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            99999999884322     2 788999999999999994   8999999999999999 78999999999865

>smart00090 RIO RIO-like kinase

Probab=99.65  E-value=7.3e-16  Score=161.23  Aligned_cols=141  Identities=16%  Similarity=0.122  Sum_probs=110.4

Q ss_pred             cCCceeeeeeeecceEEEEEE--EcCcceeEEeecCCCChh------------------------hHHHHHHHHHHHHhc
Q 047215          513 NNFDESLMIGVGGFGKVFKGE--IEDCTLAAIKRANPQSEQ------------------------GLAEFETEIEMLSKL  566 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~Ei~~l~~l  566 (851)
                      .-|.+.+.||+|+||.||+|.  ..+++.+|+|........                        ....+..|+..+.++
T Consensus        28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L  107 (237)
T smart00090       28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL  107 (237)
T ss_pred             chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            347778899999999999998  567899999987643210                        112357899999999


Q ss_pred             CCc--ceeeEEEEEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCC-eEEcCCCCC
Q 047215          567 RHR--HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG-IIHRDVKTT  643 (851)
Q Consensus       567 ~Hp--nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~-iiHrDlk~~  643 (851)
                      .|.  .+.+++++    ...++||||+++++|...+...  ..+...+...++.|++.+|.+||+   .+ ++||||||+
T Consensus       108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Dikp~  178 (237)
T smart00090      108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYK---EGELVHGDLSEY  178 (237)
T ss_pred             HhcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCCChh
Confidence            753  34455543    2358999999998887654222  245566678999999999999995   88 999999999


Q ss_pred             CeEEcCCCeEEEeecccccc
Q 047215          644 NILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       644 NILld~~~~~kl~DFGla~~  663 (851)
                      ||+++ +++++|+|||++..
T Consensus       179 NIli~-~~~i~LiDFg~a~~  197 (237)
T smart00090      179 NILVH-DGKVVIIDVSQSVE  197 (237)
T ss_pred             hEEEE-CCCEEEEEChhhhc
Confidence            99999 88999999999875

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.64  E-value=4.2e-17  Score=178.76  Aligned_cols=173  Identities=27%  Similarity=0.407  Sum_probs=130.5

Q ss_pred             cEEEEEEecCCcchhhhccCC-CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccc
Q 047215          583 EMILVYEYMANGTLRSHLFGS-DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~-~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla  661 (851)
                      .++|.|++|...+|.++|..+ .....++...+.++.|++.|++|      ++.+|||+||.||+...+..+||.|||+.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence            578999999999999999643 34557788899999999999998      68999999999999999999999999998


Q ss_pred             ccCCCCC----ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhC-CcCCCCCCCcchhcHHHHHHHHhh
Q 047215          662 KTGPSME----HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA-RAVINPTLPKDQINLADWAMKWQK  736 (851)
Q Consensus       662 ~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG-~~p~~~~~~~~~~~l~~~~~~~~~  736 (851)
                      .......    .....+...||..||+||.+.+..|+.|+||||||++|+||+.- ...+.                  +
T Consensus       404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e------------------r  465 (516)
T KOG1033|consen  404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE------------------R  465 (516)
T ss_pred             eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH------------------H
Confidence            6544332    12234567799999999999999999999999999999999862 11111                  1


Q ss_pred             hcccccc----cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          737 QRSLKSI----IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       737 ~~~~~~i----~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ...+.++    ++|....+++.     -..|+.+++.+.|.+||++.++.-|
T Consensus       466 ~~t~~d~r~g~ip~~~~~d~p~-----e~~ll~~lls~~p~~RP~~~~~~~~  512 (516)
T KOG1033|consen  466 IATLTDIRDGIIPPEFLQDYPE-----EYTLLQQLLSPSPEERPSAIEVALH  512 (516)
T ss_pred             HHhhhhhhcCCCChHHhhcCcH-----HHHHHHHhcCCCcccCchHHHHhhh
Confidence            1111222    22222222222     2579999999999999955554333

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.64  E-value=8.7e-16  Score=156.78  Aligned_cols=130  Identities=24%  Similarity=0.339  Sum_probs=105.0

Q ss_pred             eeeeecceEEEEEEEcCcceeEEeecCCCC--------hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          520 MIGVGGFGKVFKGEIEDCTLAAIKRANPQS--------EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~~~~~vavK~~~~~~--------~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .||+|+||.||+|.+. +..+++|......        ......+.+|++++..++|+++.....++...+..++||||+
T Consensus         1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            3899999999999954 5677888754321        112356788999999999887665555555666779999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      ++++|.+.+.....         .++.+++.+|.+||+   .+++|||++|+||+++ ++.++++|||+++.
T Consensus        80 ~g~~l~~~~~~~~~---------~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        80 EGKPLKDVIEEGND---------ELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             CCccHHHHHhhcHH---------HHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            99999988743210         789999999999994   9999999999999999 88999999999876

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.64  E-value=5.3e-16  Score=182.26  Aligned_cols=136  Identities=22%  Similarity=0.269  Sum_probs=110.8

Q ss_pred             CCceeeeeeeecceEEEEEEEcCcceeEEeecCCC-------ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQ-------SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~-------~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .|...++||+|+||.||+|.+.+...++.++....       .....+.+.+|++++++++|++++....++......++
T Consensus       334 ~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~l  413 (535)
T PRK09605        334 RKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTI  413 (535)
T ss_pred             ccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEE
Confidence            34556789999999999998766544332222211       11223568899999999999999988888877778899


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      ||||+++++|.+++.          ....++.+++++|.|||+   .+++||||||+|||+ .++.++|+|||+++.
T Consensus       414 v~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        414 VMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             EEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence            999999999998873          457789999999999994   899999999999999 678999999999876

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.64  E-value=2.8e-16  Score=183.18  Aligned_cols=210  Identities=24%  Similarity=0.335  Sum_probs=145.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCc-ceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDC-TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~-~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ..+|+.+++|..|++|.||..+++.. +..|+|+ ++.+..     .+-  ++.....|.+|                  
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~li-----lRn--ilt~a~npfvv------------------  135 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNLI-----LRN--ILTFAGNPFVV------------------  135 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhcc-cccchh-----hhc--cccccCCccee------------------
Confidence            36899999999999999999987643 4556643 322111     110  22222333333                  


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC---
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM---  667 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~---  667 (851)
                         |+-...+....  +++-        +++.+++|||+   .+|+|||+||.|.+|..-|.+|+.|||+++.+.-.   
T Consensus       136 ---gDc~tllk~~g--~lPv--------dmvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at  199 (1205)
T KOG0606|consen  136 ---GDCATLLKNIG--PLPV--------DMVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT  199 (1205)
T ss_pred             ---chhhhhcccCC--CCcc--------hhhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence               45555554332  2322        12678999995   99999999999999999999999999998753211   


Q ss_pred             ----------CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh
Q 047215          668 ----------EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ  737 (851)
Q Consensus       668 ----------~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~  737 (851)
                                ......+.++||+.|+|||++..+.|...+|+|++|+|+||.+-|+.||.+..+++-...      ..  
T Consensus       200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~------vi--  271 (1205)
T KOG0606|consen  200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQ------VI--  271 (1205)
T ss_pred             hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhh------hh--
Confidence                      001112467899999999999999999999999999999999999999988766543111      00  


Q ss_pred             cccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCC
Q 047215          738 RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT  777 (851)
Q Consensus       738 ~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt  777 (851)
                            -|.....+-.+..+.++++++.++|+.+|..|--
T Consensus       272 ------sd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlg  305 (1205)
T KOG0606|consen  272 ------SDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLG  305 (1205)
T ss_pred             ------hhhccccccCcCCCHHHHHHHHHHHHhChHhhcc
Confidence                  0111111223344566899999999999999953

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.63  E-value=1.8e-15  Score=154.51  Aligned_cols=141  Identities=19%  Similarity=0.130  Sum_probs=110.2

Q ss_pred             HHHHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCCh----------------------hhHHHHHHHHHHHHh
Q 047215          508 IRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSE----------------------QGLAEFETEIEMLSK  565 (851)
Q Consensus       508 l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~----------------------~~~~~~~~Ei~~l~~  565 (851)
                      +......|...+.||+|+||.||++...++..++||++.....                      .....+..|+.++.+
T Consensus        10 ~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   89 (198)
T cd05144          10 LVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKA   89 (198)
T ss_pred             HHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHH
Confidence            3333334666788999999999999988899999997654220                      011236789999999


Q ss_pred             cCCc--ceeeEEEEEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCC
Q 047215          566 LRHR--HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT  643 (851)
Q Consensus       566 l~Hp--nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~  643 (851)
                      +.|+  .+.+.++.    ...++||||+++++|......        ....+++.+++.++.++|+   .+++||||||+
T Consensus        90 l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p~  154 (198)
T cd05144          90 LYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYK---HGIIHGDLSEF  154 (198)
T ss_pred             HHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHH---CCCCcCCCCcc
Confidence            9887  45555543    345899999999999766421        3456788999999999995   89999999999


Q ss_pred             CeEEcCCCeEEEeecccccc
Q 047215          644 NILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       644 NILld~~~~~kl~DFGla~~  663 (851)
                      ||++++++.++|+|||++..
T Consensus       155 Nill~~~~~~~liDfg~~~~  174 (198)
T cd05144         155 NILVDDDEKIYIIDWPQMVS  174 (198)
T ss_pred             cEEEcCCCcEEEEECCcccc
Confidence            99999999999999999865

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.57  E-value=3.1e-14  Score=137.32  Aligned_cols=134  Identities=19%  Similarity=0.181  Sum_probs=114.1

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCC--cceeeEEEEEccCCcEEEEEEecCCcc
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRH--RHLVSLIGFCDEQNEMILVYEYMANGT  595 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H--pnIv~l~g~~~~~~~~~lV~Ey~~~gs  595 (851)
                      .+.||+|.++.||++..++ ..+++|.......  ...+..|+.+++.++|  .++.+++++...++..++++||++++.
T Consensus         3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~   79 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET   79 (155)
T ss_pred             ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence            4679999999999999766 6678888765543  4678999999999976  599999999988889999999999877


Q ss_pred             hhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       596 L~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      +..+         +......++.+++++|.+||.....+++|+|++|+||++++.+.++++|||+++.
T Consensus        80 ~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          80 LDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             cccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            7544         4566778899999999999964445899999999999999999999999999875

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.51  E-value=6.1e-14  Score=141.59  Aligned_cols=136  Identities=20%  Similarity=0.187  Sum_probs=98.2

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCChh--hHHH----------------------HHHHHHHHHhcCCc--ce
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQ--GLAE----------------------FETEIEMLSKLRHR--HL  571 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~Ei~~l~~l~Hp--nI  571 (851)
                      .+.||+|+||.||+|...++..+|||+.......  ....                      ...|...+.++.+.  .+
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            3579999999999999888889999987653211  1111                      13566666666543  34


Q ss_pred             eeEEEEEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC
Q 047215          572 VSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF  651 (851)
Q Consensus       572 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~  651 (851)
                      .+++++    ...++||||++++.+.........  .. .+...++.+++.++.++|+  +.+++||||||+||+++ ++
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~--~~~ivH~Dl~p~Nili~-~~  151 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYR--EAGLVHGDLSEYNILVD-DG  151 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhh--ccCcCcCCCChhhEEEE-CC
Confidence            455543    245899999999654322111100  11 6678899999999999994  48999999999999999 89


Q ss_pred             eEEEeecccccc
Q 047215          652 VAKMSDFGLSKT  663 (851)
Q Consensus       652 ~~kl~DFGla~~  663 (851)
                      .++|+|||.+..
T Consensus       152 ~~~liDfg~a~~  163 (187)
T cd05119         152 KVYIIDVPQAVE  163 (187)
T ss_pred             cEEEEECccccc
Confidence            999999999875

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan

Probab=99.51  E-value=4.2e-14  Score=140.38  Aligned_cols=151  Identities=26%  Similarity=0.360  Sum_probs=87.9

Q ss_pred             ceEEecCCCCccccCCcceeccCCCCCccc-cccCC----cccccCCCCCCCCCcccccceeeeccCceeeEe-eccceE
Q 047215           24 SFLINCGTNSSVNVDGRKWVGDLASNNNVT-LSSSG----IAATTDSLSGDSIYEPLYKTARVFADGLNYTFE-IIAGNY   97 (851)
Q Consensus        24 ~~~i~cG~~~~~~~~~~~~~~D~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~t~R~f~~~~~y~~~-~~~g~~   97 (851)
                      .++||||++..++.+|++|.+|....+..+ +....    ..............+++|+|.|+-+..++|.+| +++|.|
T Consensus         2 ~~~IN~Gg~~~~~~~g~~w~~D~~~~~g~~~y~~~~~~~~~~~~~~~~i~~t~d~~Lyqt~R~g~~~f~Y~ip~~~~G~Y   81 (174)
T PF11721_consen    2 VLRINAGGPAYTDSSGIVWEADQYYTGGSWGYYVSSDNNGSTSSTNSSIPGTTDDPLYQTERYGPSSFSYDIPVVPNGTY   81 (174)
T ss_dssp             EEEEEETSSSEEETTTEEE-SSSSSTTSS-----------SSTTS--TTS-HHHHHTTT-----SSSEEEEEE--S-EEE
T ss_pred             EEEEECCCCcccCCCCCEEcCCCCCCCCCcccccccccccccccccccccCCCchhhhHhhcCCCCceEEEEecCCCcEE
Confidence            379999998888889999999963222212 11110    000111111112223599999986668999999 689999


Q ss_pred             EEEEEeccCCCCC----cccccceEEEEEcceEEeecCCCCccccccccccccCCCCCcccceEEEE-EeeccCCeEEEE
Q 047215           98 IVRLHFCPFPFED----YNVNKSSFGVVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEY-FLGVDLDKLMIE  172 (851)
Q Consensus        98 ~~R~~f~~~~~~~----~~~~~~~f~v~~~g~~~l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~~~~~~~~~~i~  172 (851)
                      .|||||....+..    -......|||.+||.++|.+||..         +.+.+.+   .++.+++ -+.++++.|.|+
T Consensus        82 ~V~L~FaE~~~~~~~~~~~~G~RvFdV~v~g~~vl~~~Di~---------~~~G~~~---~~~~~~~~~v~v~dg~L~i~  149 (174)
T PF11721_consen   82 TVRLHFAELYFGASGGASGPGQRVFDVYVNGETVLKNFDIY---------AEAGGFN---KAAVRRFFNVTVTDGTLNIQ  149 (174)
T ss_dssp             EEEEEEE-SSS--------SSSS-EEEEETTEEEEEEE-HH---------HHHSSSS------EEEEEEEEEETTEEETT
T ss_pred             EEEEEeccccccccccccCCCceEEEEEecceEEEeccCHH---------HHcCCCc---eEEEEEEEEEEEeCCcEEEE
Confidence            9999999887775    335567999999999999999963         3322211   2456666 455666799999


Q ss_pred             Eec-----------CCCcceeeeee
Q 047215          173 FIP-----------SKGSFGFINAI  186 (851)
Q Consensus       173 f~~-----------~~~~~~fi~~i  186 (851)
                      |..           ...+.|.||||
T Consensus       150 f~~~~~~~~~i~~~~~~~~p~IsaI  174 (174)
T PF11721_consen  150 FVWAGKGTLCIPFIGSYGNPLISAI  174 (174)
T ss_dssp             EEEE--SEEEEEEESSSSSSSEEEE
T ss_pred             EEecCCCcEEeeccccCCCcEEeeC
Confidence            996           34455777776

It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan [. This entry represents a malectin domain, and can also be found in probable receptor-like serine/threonine-protein kinases from plants [] and in proteins described as glycoside hydrolases. ; PDB: 2KR2_A 2JWP_A 2K46_A.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.47  E-value=5.4e-15  Score=173.27  Aligned_cols=255  Identities=24%  Similarity=0.284  Sum_probs=191.5

Q ss_pred             CCceeeeeeeecceEEEEEEEcC--cceeEEeecCCCC--hhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIED--CTLAAIKRANPQS--EQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~~--~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      .|...+.||+|+|+.|-......  ...+++|.+....  .........|..+-..+. |+|++++++.....+..++++
T Consensus        21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~  100 (601)
T KOG0590|consen   21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL  100 (601)
T ss_pred             cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence            44455669999999998776432  3345666655443  333444556888877886 999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC-eEEEeeccccccCCC-
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPS-  666 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~-~~kl~DFGla~~~~~-  666 (851)
                      +|..++++.+-+........+....-....|+..++.|+|.  ..++.||||||+|.+++..+ ..+++|||+|..... 
T Consensus       101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~  178 (601)
T KOG0590|consen  101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK  178 (601)
T ss_pred             CcccccccccccccCCccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence            99999999998843333345666777889999999999994  48999999999999999999 999999999986555 


Q ss_pred             CCcccccccccc-CCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          667 MEHTHVSTAVKG-SFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       667 ~~~~~~~~~~~g-t~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      ..........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+........ ....|             .
T Consensus       179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~-~~~~~-------------~  244 (601)
T KOG0590|consen  179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG-RYSSW-------------K  244 (601)
T ss_pred             CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc-cceee-------------c
Confidence            344444556778 9999999999874 556789999999999999999988875443321 11111             1


Q ss_pred             CccC--CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          745 DPHL--KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       745 d~~l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +...  .............+++.+++..+|..|.+.+++-.+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d  286 (601)
T KOG0590|consen  245 SNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD  286 (601)
T ss_pred             ccccccccCccccCChhhhhcccccccCCchhcccccccccc
Confidence            1110  011223344557788999999999999999998777

>PLN03150 hypothetical protein; Provisional

Probab=99.47  E-value=3e-13  Score=160.80  Aligned_cols=154  Identities=27%  Similarity=0.392  Sum_probs=109.7

Q ss_pred             eEEecCCCCcc---ccC------CcceeccCC--CCCccccccCCcccccCCCCCCCCCc--ccccceeeecc---Ccee
Q 047215           25 FLINCGTNSSV---NVD------GRKWVGDLA--SNNNVTLSSSGIAATTDSLSGDSIYE--PLYKTARVFAD---GLNY   88 (851)
Q Consensus        25 ~~i~cG~~~~~---~~~------~~~~~~D~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~t~R~f~~---~~~y   88 (851)
                      ||||||+....   +..      +|.|.+|..  .+.....+....+.++  .. .+..+  .+|+|||.+..   ..+|
T Consensus       194 ~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d~~~~~~~~~~~st~~~I~~~--~~-~~~~~P~~VyqTA~~~~~~~~~lty  270 (623)
T PLN03150        194 KRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQTFGSGSDQAISTENVIKKA--SN-APNFYPESLYQSALVSTDTQPDLSY  270 (623)
T ss_pred             EEEEecCcccccccCCCCCcccCccccCcCcccCCCcccccccccccccc--cC-CCccChHHHhhhhccccCCCCceEE
Confidence            79999976432   221      699999942  0101111112222221  12 23222  39999999965   5789


Q ss_pred             eEeec-cceEEEEEEeccCCCCCcccccceEEEEEcceEEeecCCCCccccccccccccCCCCCcccceEEEEEeeccCC
Q 047215           89 TFEII-AGNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLD  167 (851)
Q Consensus        89 ~~~~~-~g~~~~R~~f~~~~~~~~~~~~~~f~v~~~g~~~l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~  167 (851)
                      .|+|. .|.|+|||||+++...........|+|++||.+++++|+..         .. .+  ....++++++.+.++++
T Consensus       271 ~~~v~~~~~Y~VrLhFaEi~~~~~~~~~R~F~V~ing~~~~~~~di~---------~~-~g--~~~~~~~~~~~v~~~~g  338 (623)
T PLN03150        271 TMDVDPNRNYSVWLHFAEIDNSITAEGKRVFDVLINGDTAFKDVDIV---------KM-SG--ERYTALVLNKTVAVSGR  338 (623)
T ss_pred             EeecCCCCCEEEEEEEEeccCccCCCceEEEEEEECCEEeecccChh---------hh-cC--CcccceEEEeEEeecCC
Confidence            99995 68999999999997654345678899999999999999963         00 11  12458899999998877


Q ss_pred             eEEEEEecCCCcceeeeeeEEEeccc
Q 047215          168 KLMIEFIPSKGSFGFINAIEIVPVVD  193 (851)
Q Consensus       168 ~~~i~f~~~~~~~~fi~~iEl~~~~~  193 (851)
                      .+.|+|+|..++.||||||||+.+-.
T Consensus       339 ~l~isl~p~~~s~pilNaiEI~~~~~  364 (623)
T PLN03150        339 TLTIVLQPKKGTHAIINAIEVFEIIT  364 (623)
T ss_pred             eEEEEEeeCCCCcceeeeeeeeeccc
Confidence            89999999988889999999999876

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.46  E-value=3.7e-13  Score=141.15  Aligned_cols=134  Identities=18%  Similarity=0.196  Sum_probs=102.5

Q ss_pred             eeee-eecceEEEEEEEcCcceeEEeecCCCC-------------hhhHHHHHHHHHHHHhcCCcce--eeEEEEEccCC
Q 047215          519 LMIG-VGGFGKVFKGEIEDCTLAAIKRANPQS-------------EQGLAEFETEIEMLSKLRHRHL--VSLIGFCDEQN  582 (851)
Q Consensus       519 ~~LG-~G~fG~Vykg~~~~~~~vavK~~~~~~-------------~~~~~~~~~Ei~~l~~l~HpnI--v~l~g~~~~~~  582 (851)
                      ..|| .||.|+||+....+ ..+++|+.....             ......+.+|++++.+|+|+++  ++.++++..+.
T Consensus        37 ~~lg~~~g~gtv~~v~~~~-~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTPG-VNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             ceeecCCCCccEEEEEeCC-ceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            4688 89999999998764 456777664311             1223567889999999998875  67777754322


Q ss_pred             ----cEEEEEEecCC-cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEee
Q 047215          583 ----EMILVYEYMAN-GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD  657 (851)
Q Consensus       583 ----~~~lV~Ey~~~-gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~D  657 (851)
                          ..++|+|++++ .+|.+++...   +++..    .+.+++.+|.+||   +.||+||||||.|||++.++.++|+|
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LID  185 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLID  185 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEEE
Confidence                23599999997 6898887442   33333    3678999999999   49999999999999999989999999


Q ss_pred             cccccc
Q 047215          658 FGLSKT  663 (851)
Q Consensus       658 FGla~~  663 (851)
                      ||.++.
T Consensus       186 fg~~~~  191 (239)
T PRK01723        186 FDRGEL  191 (239)
T ss_pred             CCCccc
Confidence            999875

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.37  E-value=2.6e-12  Score=146.29  Aligned_cols=139  Identities=19%  Similarity=0.212  Sum_probs=100.8

Q ss_pred             eeeeeecceEEEEEEEcCcceeEEeecCCCChhhH----------------------------------------HHHHH
Q 047215          519 LMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGL----------------------------------------AEFET  558 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~~  558 (851)
                      +.||.|++|+||+|++.+|+.||||+..+......                                        -+|.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            57999999999999999999999999876532111                                        02555


Q ss_pred             HHHHHHhcC-----CcceeeEEEEEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHH-HHHHhhcCCC
Q 047215          559 EIEMLSKLR-----HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR-GLHYLHTGAE  632 (851)
Q Consensus       559 Ei~~l~~l~-----HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~-gL~yLHs~~~  632 (851)
                      |.+.+.+++     ++++.-..-+....+..+|||||+++++|.+.+..... ..   .+.+++..++. .+..+|   .
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~~~~~~~l~ql~---~  275 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAENLARSFLNQVL---R  275 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CC---CHHHHHHHHHHHHHHHHH---h
Confidence            666666652     34433222233334567999999999999887643211 11   34556666666 467888   4


Q ss_pred             CCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          633 RGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       633 ~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      .|++|+|+||.||+++++++++++|||++...
T Consensus       276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l  307 (437)
T TIGR01982       276 DGFFHADLHPGNIFVLKDGKIIALDFGIVGRL  307 (437)
T ss_pred             CCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence            89999999999999999999999999998763

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.36  E-value=3.9e-13  Score=138.83  Aligned_cols=205  Identities=24%  Similarity=0.361  Sum_probs=141.7

Q ss_pred             HHHHHhcCCcceeeEEEEEcc-----CCcEEEEEEecCCcchhhhccCCC--CCCCchhhhHHHHHHHHHHHHHhhcCCC
Q 047215          560 IEMLSKLRHRHLVSLIGFCDE-----QNEMILVYEYMANGTLRSHLFGSD--LPPLTWKQRLDACIGAARGLHYLHTGAE  632 (851)
Q Consensus       560 i~~l~~l~HpnIv~l~g~~~~-----~~~~~lV~Ey~~~gsL~~~L~~~~--~~~l~~~~~~~i~~~ia~gL~yLHs~~~  632 (851)
                      ..-|-++.|-|||+++.|+.+     ..+..++.|||..|+|..+|+...  ...+......+++-||..||.|||+ +.
T Consensus       118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~  196 (458)
T KOG1266|consen  118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CD  196 (458)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cC
Confidence            334556789999999998854     346799999999999999996532  3456777778999999999999997 77


Q ss_pred             CCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC--CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHH
Q 047215          633 RGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM--EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV  710 (851)
Q Consensus       633 ~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLl  710 (851)
                      ++|+|+++.++.|++..++-+|+.----....+..  ........-.+-++|.+||+-.....+..+|||+||+..+||.
T Consensus       197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema  276 (458)
T KOG1266|consen  197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA  276 (458)
T ss_pred             CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence            89999999999999999998888421111100000  0111112234678999999988888899999999999999998


Q ss_pred             hCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          711 CARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       711 tG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .+..-.......-   ..        +......+- .+.       ...-++++.+|++..|..||+|++++.|
T Consensus       277 ilEiq~tnseS~~---~~--------ee~ia~~i~-~le-------n~lqr~~i~kcl~~eP~~rp~ar~llfH  331 (458)
T KOG1266|consen  277 ILEIQSTNSESKV---EV--------EENIANVII-GLE-------NGLQRGSITKCLEGEPNGRPDARLLLFH  331 (458)
T ss_pred             HheeccCCCccee---eh--------hhhhhhhee-ecc-------CccccCcCcccccCCCCCCcchhhhhcC
Confidence            7753211110000   00        000111100 000       0112457899999999999999999988

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.19  E-value=2e-11  Score=137.13  Aligned_cols=250  Identities=20%  Similarity=0.216  Sum_probs=177.6

Q ss_pred             cCCceeeeeee--ecceEEEEEEE---cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcE
Q 047215          513 NNFDESLMIGV--GGFGKVFKGEI---EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       513 ~~f~~~~~LG~--G~fG~Vykg~~---~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~  584 (851)
                      ..|...+.+|.  |.+|.||.+..   .+...+|+|+-+..  .......=.+|+...+++ .|+|.++....+..++..
T Consensus       114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l  193 (524)
T KOG0601|consen  114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL  193 (524)
T ss_pred             hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence            34555677999  99999999986   34566788873322  223333335677777777 499999988889999999


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHH----HHHHhhcCCCCCeEEcCCCCCCeEEcCC-CeEEEeecc
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR----GLHYLHTGAERGIIHRDVKTTNILLDEN-FVAKMSDFG  659 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~----gL~yLHs~~~~~iiHrDlk~~NILld~~-~~~kl~DFG  659 (851)
                      ++-+|++. .+|..+.+... ..++...+..+..+...    ||.++|+   .+++|-|+||.||++..+ ...+++|||
T Consensus       194 fiqtE~~~-~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~df~  268 (524)
T KOG0601|consen  194 FIQTELCG-ESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLTDFG  268 (524)
T ss_pred             eeeecccc-chhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecCCcc
Confidence            99999886 67777765432 33566677777777777    9999996   899999999999999988 889999999


Q ss_pred             ccccCCCCCccc---cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh
Q 047215          660 LSKTGPSMEHTH---VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK  736 (851)
Q Consensus       660 la~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~  736 (851)
                      +...........   ......|...|++||..+ .-++...|+|++|.+.+|..++-..........      |    .+
T Consensus       269 ~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~------W----~~  337 (524)
T KOG0601|consen  269 LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSS------W----SQ  337 (524)
T ss_pred             eeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCC------c----cc
Confidence            987654433221   122335778899999884 467899999999999999999876554331110      1    01


Q ss_pred             hcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       737 ~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ....   .   +..++-.....++...+..+++.+|..|++.+.+..+
T Consensus       338 ~r~~---~---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l  379 (524)
T KOG0601|consen  338 LRQG---Y---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL  379 (524)
T ss_pred             cccc---c---CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence            1110   0   1111222223345558999999999999998887665

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.18  E-value=1.5e-10  Score=114.68  Aligned_cols=131  Identities=18%  Similarity=0.125  Sum_probs=95.9

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCccee-eEEEEEccCCcEEEEEEecCCcch
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLV-SLIGFCDEQNEMILVYEYMANGTL  596 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv-~l~g~~~~~~~~~lV~Ey~~~gsL  596 (851)
                      .+.|+.|.++.||+.+.. +..+++|....... ....+..|+.+++.+.+.+++ +++.+..  ...++||||+++.++
T Consensus         3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l   78 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL   78 (170)
T ss_pred             eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence            356899999999999866 56688898755432 223567899999998765554 4454433  345899999999887


Q ss_pred             hhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCC--CCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA--ERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       597 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~--~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .+..          .....++.+++++|..||+..  ..+++|+|+++.||+++ ++.++++|||.+..
T Consensus        79 ~~~~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          79 LTED----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             cccc----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            5430          112345678999999999622  22369999999999999 66899999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.15  E-value=4.1e-10  Score=129.86  Aligned_cols=144  Identities=16%  Similarity=0.141  Sum_probs=93.0

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCChhh------------------------------H--------
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSEQG------------------------------L--------  553 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~~~------------------------------~--------  553 (851)
                      .+|+. +.||+|++|+||+|++.+ |+.||||+..+.-...                              .        
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~  198 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH  198 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence            45766 689999999999999987 9999999987652110                              0        


Q ss_pred             --HHHHHHHHHHHhcC----CcceeeEEEEE-ccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHH-HHH
Q 047215          554 --AEFETEIEMLSKLR----HRHLVSLIGFC-DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR-GLH  625 (851)
Q Consensus       554 --~~~~~Ei~~l~~l~----HpnIv~l~g~~-~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~-gL~  625 (851)
                        -+|.+|+..+.+++    +.+.+.+-.++ .-.++.+|||||++|+.|.+.-.-... ..+   +..++...++ -+.
T Consensus       199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~-g~d---~~~la~~~v~~~~~  274 (537)
T PRK04750        199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAA-GTD---MKLLAERGVEVFFT  274 (537)
T ss_pred             HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhc-CCC---HHHHHHHHHHHHHH
Confidence              12445555555553    33333332222 224567899999999999774211111 111   1122222221 122


Q ss_pred             HhhcCCCCCeEEcCCCCCCeEEcCCC----eEEEeeccccccC
Q 047215          626 YLHTGAERGIIHRDVKTTNILLDENF----VAKMSDFGLSKTG  664 (851)
Q Consensus       626 yLHs~~~~~iiHrDlk~~NILld~~~----~~kl~DFGla~~~  664 (851)
                      .++   ..|++|+|+||.||+++.++    +++++|||++...
T Consensus       275 Qif---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l  314 (537)
T PRK04750        275 QVF---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL  314 (537)
T ss_pred             HHH---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence            333   48999999999999999888    9999999998753

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.09  E-value=1.1e-09  Score=124.09  Aligned_cols=167  Identities=16%  Similarity=0.191  Sum_probs=124.8

Q ss_pred             EEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcchhhhccCCCCCCCchhh
Q 047215          533 EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ  612 (851)
Q Consensus       533 ~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~  612 (851)
                      +..++.++.|...+..+........+-++.|+.++||||++++...+.++..|||+|-+.  .|..++..     +....
T Consensus        33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-----l~~~~  105 (690)
T KOG1243|consen   33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-----LGKEE  105 (690)
T ss_pred             eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-----hHHHH
Confidence            345667777777666655444556778899999999999999999999999999999874  45555522     33556


Q ss_pred             hHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccC
Q 047215          613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ  692 (851)
Q Consensus       613 ~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  692 (851)
                      ....+.||+.||.+||.  +.+++|++|....|+|+..|+.||++|.++........  ......---.|..|+.+....
T Consensus       106 v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~  181 (690)
T KOG1243|consen  106 VCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE  181 (690)
T ss_pred             HHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc
Confidence            67778999999999997  78999999999999999999999999998764322221  111111223466676553322


Q ss_pred             CCchHHHHHHHHHHHHHHhC
Q 047215          693 LTEKSDVYSFGVVLFEVVCA  712 (851)
Q Consensus       693 ~t~ksDVwS~GvvL~eLltG  712 (851)
                        -..|.|-||++++|++.|
T Consensus       182 --~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  182 --WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             --cchhhhhHHHHHHHHhCc
Confidence              346999999999999999

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.07  E-value=1.6e-09  Score=112.18  Aligned_cols=142  Identities=19%  Similarity=0.282  Sum_probs=112.1

Q ss_pred             eeeeeecceEEEEEEEcCcceeEEeecCCCCh-hhHHHHHHHHHHHHhcCC--cceeeEEEEEccCC---cEEEEEEecC
Q 047215          519 LMIGVGGFGKVFKGEIEDCTLAAIKRANPQSE-QGLAEFETEIEMLSKLRH--RHLVSLIGFCDEQN---EMILVYEYMA  592 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H--pnIv~l~g~~~~~~---~~~lV~Ey~~  592 (851)
                      +.|+.|..+.||+.+..++..+++|....... .....+..|.++++.+.+  .++.+++.++....   ..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            46899999999999987767888998665322 235678899999999975  44677888876643   6689999999


Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcC------------------------------------------
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG------------------------------------------  630 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~------------------------------------------  630 (851)
                      +.++.+.+..   ..++..++..++.++++.|..||+.                                          
T Consensus        84 G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (223)
T cd05154          84 GRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL  160 (223)
T ss_pred             CEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence            9988876532   3467778888899999999999852                                          


Q ss_pred             -----------CCCCeEEcCCCCCCeEEcC--CCeEEEeecccccc
Q 047215          631 -----------AERGIIHRDVKTTNILLDE--NFVAKMSDFGLSKT  663 (851)
Q Consensus       631 -----------~~~~iiHrDlk~~NILld~--~~~~kl~DFGla~~  663 (851)
                                 ....++|+|+++.||+++.  ++.+.|+||+.+..
T Consensus       161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                       1355799999999999998  67789999998875

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan []

Probab=98.98  E-value=2.9e-09  Score=117.69  Aligned_cols=152  Identities=28%  Similarity=0.414  Sum_probs=99.4

Q ss_pred             ceEEecCCCC--cccc---CCcceeccCCCCCccccccCCcccccCCCCCCCCCcc--cccceeeeccC-----ceeeEe
Q 047215           24 SFLINCGTNS--SVNV---DGRKWVGDLASNNNVTLSSSGIAATTDSLSGDSIYEP--LYKTARVFADG-----LNYTFE   91 (851)
Q Consensus        24 ~~~i~cG~~~--~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~t~R~f~~~-----~~y~~~   91 (851)
                      -+|+|||+..  ....   -+|.|.+...+......+....+. ... ...+..+|  +|+|||.-...     .+|.| 
T Consensus       180 ~~R~n~G~~~~~iryp~D~~dR~W~~~~~~~~~~~ist~~~i~-~~~-~~~~~~~P~~V~~TA~~~~~~s~~~nltw~~-  256 (347)
T PF12819_consen  180 VYRLNVGGSSSFIRYPDDTYDRIWQPYSSSPGWSNISTTSNIN-INS-SNNPYDAPSAVYQTARTPSNSSDPLNLTWSF-  256 (347)
T ss_pred             EEeecCCCcccccCCCCCcceeeccccccCccccccccceeee-ccc-CCccCcChHHHHHhhhcccccccceEEEecc-
Confidence            4899999876  3222   379999741111111111111111 111 22233333  99999987433     35666 


Q ss_pred             eccc-eEEEEEEeccCCCCCcccccceEEEEEcceEEeecCCCCccccccccccccCCCCCcccceEEEEEeeccCC-eE
Q 047215           92 IIAG-NYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLD-KL  169 (851)
Q Consensus        92 ~~~g-~~~~R~~f~~~~~~~~~~~~~~f~v~~~g~~~l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~  169 (851)
                      +.++ .|+||||||.+....-+.....|+|.+||.++..++++.      -+       .....++++++++.++++ .+
T Consensus       257 ~~~~~~y~v~lHFaEi~~~~~~~~~R~F~IyiN~~~~~~~~~~~------~~-------~~~~~~~~~d~~~~~~~~~~~  323 (347)
T PF12819_consen  257 VDPGFSYYVRLHFAEIQSLSPNNNQREFDIYINGQTAYSDVSPP------YL-------GADTVPYYSDYVVNVPDSGFL  323 (347)
T ss_pred             CCCCccEEEEEEEeecccccCCCCeEEEEEEECCeEccCccCcc------cc-------cCcceEeecceEEEecCCCEE
Confidence            6665 799999999998754334468999999999998877752      01       112346788999988765 78


Q ss_pred             EEEEecCCCc--ceeeeeeEEEec
Q 047215          170 MIEFIPSKGS--FGFINAIEIVPV  191 (851)
Q Consensus       170 ~i~f~~~~~~--~~fi~~iEl~~~  191 (851)
                      .|++.|+..+  -|+|||+||+.+
T Consensus       324 ~isL~~t~~S~lppiLNalEIy~v  347 (347)
T PF12819_consen  324 NISLGPTPDSTLPPILNALEIYKV  347 (347)
T ss_pred             EEEEEeCCCCCcCceeEeeeeEeC
Confidence            9999999866  599999999864

This entry represents a malectin-like domain found in a number of plant receptor kinases.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.95  E-value=5.4e-09  Score=105.18  Aligned_cols=134  Identities=17%  Similarity=0.157  Sum_probs=96.1

Q ss_pred             eeeeeecceEEEEEEEcC-------cceeEEeecCCCC----------------------hhhHHHH----HHHHHHHHh
Q 047215          519 LMIGVGGFGKVFKGEIED-------CTLAAIKRANPQS----------------------EQGLAEF----ETEIEMLSK  565 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~-------~~~vavK~~~~~~----------------------~~~~~~~----~~Ei~~l~~  565 (851)
                      ..||.|.-+.||.|...+       +..+|||+.+...                      ......+    .+|++.|++
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999997543       4678998643210                      0011223    379999999


Q ss_pred             cCC--cceeeEEEEEccCCcEEEEEEecCCcchhh-hccCCCCCCCchhhhHHHHHHHHHHHHHh-hcCCCCCeEEcCCC
Q 047215          566 LRH--RHLVSLIGFCDEQNEMILVYEYMANGTLRS-HLFGSDLPPLTWKQRLDACIGAARGLHYL-HTGAERGIIHRDVK  641 (851)
Q Consensus       566 l~H--pnIv~l~g~~~~~~~~~lV~Ey~~~gsL~~-~L~~~~~~~l~~~~~~~i~~~ia~gL~yL-Hs~~~~~iiHrDlk  641 (851)
                      +..  -++.+++++    ...+|||||+.++.+.. .|..   ..++..+...+..+++.+|..| |   +.++||+||+
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGDLs  152 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYK---ECNLVHADLS  152 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence            853  466666765    46789999998754422 2211   1244456677889999999999 6   5899999999


Q ss_pred             CCCeEEcCCCeEEEeecccccc
Q 047215          642 TTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       642 ~~NILld~~~~~kl~DFGla~~  663 (851)
                      +.|||++ ++.+.|+|||.+..
T Consensus       153 ~~NIL~~-~~~v~iIDF~qav~  173 (197)
T cd05146         153 EYNMLWH-DGKVWFIDVSQSVE  173 (197)
T ss_pred             HHHEEEE-CCcEEEEECCCcee
Confidence            9999997 46799999998765

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.93  E-value=7.2e-10  Score=124.72  Aligned_cols=248  Identities=19%  Similarity=0.191  Sum_probs=175.8

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc--CcceeEEeecCCCChhhHHH--HHHHHHHHHhc-CCcceeeEEEEEccCCcEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE--DCTLAAIKRANPQSEQGLAE--FETEIEMLSKL-RHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~--~~~~vavK~~~~~~~~~~~~--~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~  585 (851)
                      -..+|..+..||.|.|+.|++...+  ++..+++|...+.......+  -..|+.+...+ .|.++++....+......+
T Consensus       263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~  342 (524)
T KOG0601|consen  263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY  342 (524)
T ss_pred             ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence            4567888999999999999987643  56778888776653322222  23567676666 5888888887777777888


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCC-CeEEEeeccccccC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN-FVAKMSDFGLSKTG  664 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~-~~~kl~DFGla~~~  664 (851)
                      +--||++++++...+  .-...+....++++..|++.++.++|+   +.++|+|+||+||++..+ +..++.|||+....
T Consensus       343 ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~  417 (524)
T KOG0601|consen  343 IPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGCWTRL  417 (524)
T ss_pred             CchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhcccccccccc
Confidence            999999999887665  223456778889999999999999994   999999999999999775 88999999997531


Q ss_pred             CCCCccccccccccCCccc--CcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          665 PSMEHTHVSTAVKGSFGYL--DPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       665 ~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      ....     ......-++.  +|+......+-.+.|++|||.-..|.+++........        .|          ..
T Consensus       418 ~~~~-----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~--------~~----------~~  474 (524)
T KOG0601|consen  418 AFSS-----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV--------QS----------LT  474 (524)
T ss_pred             ceec-----ccccccccccccchhhccccccccccccccccccccccccCcccCcccc--------cc----------ee
Confidence            1111     1111222333  5555556678889999999999999999865322211        01          11


Q ss_pred             ccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       743 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      +....+. .. +.....+..+.+.+...++..||.+.++..|.+..
T Consensus       475 i~~~~~p-~~-~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~  518 (524)
T KOG0601|consen  475 IRSGDTP-NL-PGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY  518 (524)
T ss_pred             eeccccc-CC-CchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence            1111111 11 12226678888999999999999999888775544

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.85  E-value=2e-08  Score=97.72  Aligned_cols=130  Identities=25%  Similarity=0.337  Sum_probs=99.1

Q ss_pred             eeeeecceEEEEEEEcCcceeEEeecCCCC---h-----hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          520 MIGVGGFGKVFKGEIEDCTLAAIKRANPQS---E-----QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~~~~~vavK~~~~~~---~-----~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .+++|+-+.+|.+.+.+.. +++|.-.+..   +     -....-.+|.++|.+++--.|...+=+..+.+...|+|||.
T Consensus         3 ~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I   81 (204)
T COG3642           3 LIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI   81 (204)
T ss_pred             hhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence            5789999999999775544 4555432221   1     11234667999999987666665555666777889999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      ++-.|.+.|...         ...++..+-+-+.-||   +.+|||+||.++||++..+. +.++||||+..
T Consensus        82 ~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          82 EGELLKDALEEA---------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             CChhHHHHHHhc---------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            999999888443         3567777888889999   59999999999999998765 99999999875

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.85  E-value=1.3e-09  Score=128.44  Aligned_cols=248  Identities=20%  Similarity=0.248  Sum_probs=166.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC-cceeEEe---ecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED-CTLAAIK---RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK---~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      .+.|.+.+-+-+|.++.++.+.-.. +...++|   ....-.....+....+-.++-..+||-+++..--+......+|+
T Consensus       803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~  882 (1205)
T KOG0606|consen  803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV  882 (1205)
T ss_pred             CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence            3556666677889999988764321 1111222   11111112222333333333334567777665555567788999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      ++|..+++|...|+...  ..+..-.......+...++|||+   ..++|||++|.|+|...++..+++|||........
T Consensus       883 ~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~  957 (1205)
T KOG0606|consen  883 GHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI  957 (1205)
T ss_pred             hHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCccccccccccc
Confidence            99999999999987654  34444444445566778999995   55899999999999999999999999843210000


Q ss_pred             -----------------------------CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCC
Q 047215          668 -----------------------------EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINP  718 (851)
Q Consensus       668 -----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~  718 (851)
                                                   +.........||+.|++||...+..-...+|.|++|++++|.++|..|++.
T Consensus       958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen  958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred             cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence                                         000112346699999999999999999999999999999999999999987


Q ss_pred             CCCcchhcHHHHHHHHhhhcccccccCccC-CCCCChhHHHHHHHHHHHhcccCCCCCCCHH
Q 047215          719 TLPKDQINLADWAMKWQKQRSLKSIIDPHL-KGNYSPESLEKFGEIAEKCLDDEGKNRPTMG  779 (851)
Q Consensus       719 ~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~  779 (851)
                      ..+...               +..+..... ....+.+.....++++...+..+|.+|-.+.
T Consensus      1038 ~tpq~~---------------f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1038 ETPQQI---------------FENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             cchhhh---------------hhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence            655432               111221111 1223455667788999999999999998876

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.81  E-value=4.5e-08  Score=94.67  Aligned_cols=143  Identities=20%  Similarity=0.213  Sum_probs=101.5

Q ss_pred             eeeeeeeecceEEEEEEEcCcceeEEe-ecCCCC-------hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          517 ESLMIGVGGFGKVFKGEIEDCTLAAIK-RANPQS-------EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       517 ~~~~LG~G~fG~Vykg~~~~~~~vavK-~~~~~~-------~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ...+|-+|+-+.|+++.+.+.+. .|| ++.+.-       .-......+|+++|.+++--.|.-..=++.+...-.|+|
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~-iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAA-IIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             cceeeeccceeeEeeeccCCcee-EEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence            35578899999999999876543 444 333321       122345778999999987545544444444445567999


Q ss_pred             EecCC-cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC---eEEEeecccccc
Q 047215          589 EYMAN-GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF---VAKMSDFGLSKT  663 (851)
Q Consensus       589 Ey~~~-gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~---~~kl~DFGla~~  663 (851)
                      ||+++ .++.+++......+.........+..+-+.+.-||   ...|||+||..+||+|..++   .+.++|||++..
T Consensus        90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence            99987 47777776544333334444788889999999999   59999999999999995433   468999999865

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.78  E-value=1.6e-07  Score=103.56  Aligned_cols=166  Identities=17%  Similarity=0.223  Sum_probs=125.7

Q ss_pred             eEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEc----cCCcEEEEEEecCC-cchhhhc
Q 047215          527 GKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD----EQNEMILVYEYMAN-GTLRSHL  600 (851)
Q Consensus       527 G~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~----~~~~~~lV~Ey~~~-gsL~~~L  600 (851)
                      .+.||+.. -+|..+++|++.....+.......-+++++++.|+|+|++..++.    .+..+++||+|.|+ ++|.+.-
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~  369 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY  369 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence            56789874 578889999984433333334456788999999999999998875    34578999999986 5777765


Q ss_pred             cCCC-------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          601 FGSD-------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       601 ~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      +...             ....++..++.++.|++.||.++|+   .|+.-+-|.+++||++.+.+++|+..|........
T Consensus       370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d  446 (655)
T KOG3741|consen  370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDVLQED  446 (655)
T ss_pred             ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence            4321             2346778899999999999999996   88888999999999999999999988876543221


Q ss_pred             CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA  714 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~  714 (851)
                      ..                |-+.+   -.+-|.=.||.+++.|.||..
T Consensus       447 ~~----------------~~le~---~Qq~D~~~lG~ll~aLAt~~~  474 (655)
T KOG3741|consen  447 PT----------------EPLES---QQQNDLRDLGLLLLALATGTE  474 (655)
T ss_pred             CC----------------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence            10                11111   235788899999999999964

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.65  E-value=2.5e-07  Score=98.36  Aligned_cols=139  Identities=14%  Similarity=0.095  Sum_probs=96.9

Q ss_pred             eeeecceEEEEEEEcCcceeEEeecCCCChh-----------hHHHHHHHHHHHHhcCCc--ceeeEEEEEcc-----CC
Q 047215          521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQ-----------GLAEFETEIEMLSKLRHR--HLVSLIGFCDE-----QN  582 (851)
Q Consensus       521 LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~-----------~~~~~~~Ei~~l~~l~Hp--nIv~l~g~~~~-----~~  582 (851)
                      +-+-....|.+..++ |+.+.||+.......           ....+.+|...+.+|..-  ...+++++.+.     ..
T Consensus        30 v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~  108 (268)
T PRK15123         30 FRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATR  108 (268)
T ss_pred             EecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccc
Confidence            333333446666654 456888876543311           111478899999888533  33344555532     23


Q ss_pred             cEEEEEEecCCc-chhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-------CCeEE
Q 047215          583 EMILVYEYMANG-TLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-------NFVAK  654 (851)
Q Consensus       583 ~~~lV~Ey~~~g-sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-------~~~~k  654 (851)
                      .-++|+|++++- +|.+++......+.....+..++.+++..+.-||   ..||+|+|++++|||++.       +..+.
T Consensus       109 ~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~  185 (268)
T PRK15123        109 TSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLKLS  185 (268)
T ss_pred             eeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCceEE
Confidence            578999999986 7888874322233455677789999999999999   599999999999999975       57899


Q ss_pred             Eeecccccc
Q 047215          655 MSDFGLSKT  663 (851)
Q Consensus       655 l~DFGla~~  663 (851)
                      |+||+.++.
T Consensus       186 LIDl~r~~~  194 (268)
T PRK15123        186 VIDLHRAQI  194 (268)
T ss_pred             EEECCcccc
Confidence            999998754

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.61  E-value=3.3e-07  Score=91.92  Aligned_cols=124  Identities=20%  Similarity=0.224  Sum_probs=82.0

Q ss_pred             EEEEEEEcCcceeEEeecCCCC--------------------------hhhHHHHHHHHHHHHhcCCc--ceeeEEEEEc
Q 047215          528 KVFKGEIEDCTLAAIKRANPQS--------------------------EQGLAEFETEIEMLSKLRHR--HLVSLIGFCD  579 (851)
Q Consensus       528 ~Vykg~~~~~~~vavK~~~~~~--------------------------~~~~~~~~~Ei~~l~~l~Hp--nIv~l~g~~~  579 (851)
                      .||.|...++..+|+|......                          ........+|.+.|.++..-  ++.+++++. 
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            4888888888888998644210                          00123467899999999755  566666553 


Q ss_pred             cCCcEEEEEEecC--CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHh-hcCCCCCeEEcCCCCCCeEEcCCCeEEEe
Q 047215          580 EQNEMILVYEYMA--NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYL-HTGAERGIIHRDVKTTNILLDENFVAKMS  656 (851)
Q Consensus       580 ~~~~~~lV~Ey~~--~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yL-Hs~~~~~iiHrDlk~~NILld~~~~~kl~  656 (851)
                         ..+|||||++  +..+..+. ...   ++..+...++.+++..+..+ |   ..+|||+||.+.|||++++ .+.|+
T Consensus        80 ---~~~ivME~I~~~G~~~~~l~-~~~---~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~iI  148 (188)
T PF01163_consen   80 ---RNVIVMEYIGEDGVPLPRLK-DVD---LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYII  148 (188)
T ss_dssp             ---TTEEEEE--EETTEEGGCHH-HCG---GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE-
T ss_pred             ---CCEEEEEecCCCccchhhHH-hcc---ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEEE
Confidence               4479999998  65554433 111   22456677788888866664 5   5899999999999999988 99999


Q ss_pred             ecccccc
Q 047215          657 DFGLSKT  663 (851)
Q Consensus       657 DFGla~~  663 (851)
                      |||.+..
T Consensus       149 Df~qav~  155 (188)
T PF01163_consen  149 DFGQAVD  155 (188)
T ss_dssp             -GTTEEE
T ss_pred             ecCccee
Confidence            9998765

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.55  E-value=2.8e-06  Score=91.66  Aligned_cols=258  Identities=14%  Similarity=0.158  Sum_probs=154.8

Q ss_pred             eeeeeecceEEEEE-EEcCcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEE------ccC-CcEEEEEE
Q 047215          519 LMIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFC------DEQ-NEMILVYE  589 (851)
Q Consensus       519 ~~LG~G~fG~Vykg-~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~------~~~-~~~~lV~E  589 (851)
                      +.||+|+-+.+|-- ...+  . +.|+..........   +.+.+|... .||-+-.-+.|=      -.. ...-++|.
T Consensus        17 r~LgqGgea~ly~l~e~~d--~-VAKIYh~Pppa~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP   90 (637)
T COG4248          17 RPLGQGGEADLYTLGEVRD--Q-VAKIYHAPPPAAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP   90 (637)
T ss_pred             ccccCCccceeeecchhhc--h-hheeecCCCchHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence            46999999999853 2222  1 23433322222112   233344444 566444323221      112 22567777


Q ss_pred             ecCCcc-hhhhcc----CCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          590 YMANGT-LRSHLF----GSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       590 y~~~gs-L~~~L~----~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      .+++.. +.+++.    ....+...|...+++++.+|.+.+-||   +.|.+-+|+.++|+|+++++.+.|.|=..-...
T Consensus        91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~  167 (637)
T COG4248          91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN  167 (637)
T ss_pred             cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccceeec
Confidence            766542 233332    123456889999999999999999999   599999999999999999999999974433222


Q ss_pred             CCCCccccccccccCCcccCccccc-----ccCCCchHHHHHHHHHHHHHHhC-CcCCCCCCCcch-hcHHHHHHHHhhh
Q 047215          665 PSMEHTHVSTAVKGSFGYLDPEYFW-----RQQLTEKSDVYSFGVVLFEVVCA-RAVINPTLPKDQ-INLADWAMKWQKQ  737 (851)
Q Consensus       665 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDVwS~GvvL~eLltG-~~p~~~~~~~~~-~~l~~~~~~~~~~  737 (851)
                         ..........|...|.+||.-.     +-.-+...|.|.+||++++|+.| +.||.+...... ..-.+-   ....
T Consensus       168 ---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~---~Ia~  241 (637)
T COG4248         168 ---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET---DIAH  241 (637)
T ss_pred             ---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh---hhhc
Confidence               1222334456888999999765     34567789999999999999887 778765321100 000000   0000


Q ss_pred             cccccccCc--cC---CCCCC-hhHHHHHHHHHHHhcccC--CCCCCCHHHHHHHHHHHHHh
Q 047215          738 RSLKSIIDP--HL---KGNYS-PESLEKFGEIAEKCLDDE--GKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       738 ~~~~~i~d~--~l---~~~~~-~~~~~~l~~l~~~Cl~~d--P~~RPt~~evl~~L~~~~~~  791 (851)
                      +......+.  .+   ....+ .-.++.+..+..+|+...  +.-|||++..+..|..+.+.
T Consensus       242 g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~  303 (637)
T COG4248         242 GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQ  303 (637)
T ss_pred             ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence            111111110  00   11122 234467888888998754  46799999998888776543

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.41  E-value=1.3e-06  Score=90.18  Aligned_cols=132  Identities=22%  Similarity=0.189  Sum_probs=94.6

Q ss_pred             eeeeeeeecceEEEEEEEcCcceeEEeecCCCCh----------------------hhHHHHHHHHHHHHhcCCc--cee
Q 047215          517 ESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSE----------------------QGLAEFETEIEMLSKLRHR--HLV  572 (851)
Q Consensus       517 ~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~----------------------~~~~~~~~Ei~~l~~l~Hp--nIv  572 (851)
                      +...||.|.-+.||.|...++..++||.-+....                      -.....++|.+.|.+|.-.  .|.
T Consensus        95 iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP  174 (304)
T COG0478          95 IGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVP  174 (304)
T ss_pred             hccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCC
Confidence            3457999999999999999999999995432210                      1123467899999999654  777


Q ss_pred             eEEEEEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe
Q 047215          573 SLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV  652 (851)
Q Consensus       573 ~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~  652 (851)
                      +.+++    +...+||||.++-.|...-       ++....-.|+..|++-+.-+-   ..|+||+|+..-||+++++|.
T Consensus       175 ~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV~~dg~  240 (304)
T COG0478         175 KPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILVTEDGD  240 (304)
T ss_pred             Ccccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEEecCCC
Confidence            77766    5678999999986665432       122333334444444444333   388999999999999999999


Q ss_pred             EEEeeccccc
Q 047215          653 AKMSDFGLSK  662 (851)
Q Consensus       653 ~kl~DFGla~  662 (851)
                      +.++||--+.
T Consensus       241 ~~vIDwPQ~v  250 (304)
T COG0478         241 IVVIDWPQAV  250 (304)
T ss_pred             EEEEeCcccc
Confidence            9999996554

>PRK09902 hypothetical protein; Provisional

Probab=98.39  E-value=3e-06  Score=85.58  Aligned_cols=138  Identities=17%  Similarity=0.147  Sum_probs=105.0

Q ss_pred             eeeecceEEEEEEEcCcceeEEeecCCC---C---hhhHHHHHHHHHHHHhcCC--cceeeEEEEEc-c----CCcEEEE
Q 047215          521 IGVGGFGKVFKGEIEDCTLAAIKRANPQ---S---EQGLAEFETEIEMLSKLRH--RHLVSLIGFCD-E----QNEMILV  587 (851)
Q Consensus       521 LG~G~fG~Vykg~~~~~~~vavK~~~~~---~---~~~~~~~~~Ei~~l~~l~H--pnIv~l~g~~~-~----~~~~~lV  587 (851)
                      -|+||-+.|++-.+++. .+-+|+....   +   +.+...|.+|+..|.+|..  -.+.+++ ++. .    .-+-+||
T Consensus        26 ~~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV  103 (216)
T PRK09902         26 YRRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV  103 (216)
T ss_pred             cCCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence            36799999998777665 5778876522   1   3466789999999999953  3355555 332 1    1246899


Q ss_pred             EEecCC-cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe--EEEeecccccc
Q 047215          588 YEYMAN-GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV--AKMSDFGLSKT  663 (851)
Q Consensus       588 ~Ey~~~-gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~--~kl~DFGla~~  663 (851)
                      +|-+++ -+|.+++......+.+..++..+..+++..+.-||   +.++.|+|+.++|||++.++.  ++++||.-++.
T Consensus       104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            997764 58888886655556778888899999999999999   499999999999999986666  99999987764

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.35  E-value=1.5e-07  Score=107.69  Aligned_cols=153  Identities=21%  Similarity=0.286  Sum_probs=104.2

Q ss_pred             HHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc-----c--ccccccccCCcccCccccc
Q 047215          617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH-----T--HVSTAVKGSFGYLDPEYFW  689 (851)
Q Consensus       617 ~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~-----~--~~~~~~~gt~~y~aPE~~~  689 (851)
                      +.+++.||.|+|.  ..++||+.|.|++|.++.++..||+.|+.+........     .  ....-..-...|.|||++.
T Consensus       105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~  182 (700)
T KOG2137|consen  105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL  182 (700)
T ss_pred             hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence            3455689999996  78899999999999999999999999998754332111     0  0111122456799999999


Q ss_pred             ccCCCchHHHHHHHHHHHHHHhCCcC-CCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhc
Q 047215          690 RQQLTEKSDVYSFGVVLFEVVCARAV-INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCL  768 (851)
Q Consensus       690 ~~~~t~ksDVwS~GvvL~eLltG~~p-~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl  768 (851)
                      ....+.++|+||+||+++-+..|+.+ +........             .......+..-...++...+.++++=+.+++
T Consensus       183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~-------------~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l  249 (700)
T KOG2137|consen  183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS-------------YSFSRNLLNAGAFGYSNNLPSELRESLKKLL  249 (700)
T ss_pred             cccccccccceeeeeEEEEEecCCcchhhccCCcch-------------hhhhhcccccccccccccCcHHHHHHHHHHh
Confidence            98999999999999999999855443 322111000             0000011111111234556677888888999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 047215          769 DDEGKNRPTMGEVLWH  784 (851)
Q Consensus       769 ~~dP~~RPt~~evl~~  784 (851)
                      ..++..||++.+++..
T Consensus       250 ~~~~~~rp~~~~l~~~  265 (700)
T KOG2137|consen  250 NGDSAVRPTLDLLLSI  265 (700)
T ss_pred             cCCcccCcchhhhhcc
Confidence            9999999988777654

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.28  E-value=4e-06  Score=86.07  Aligned_cols=106  Identities=24%  Similarity=0.263  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHhcCC--cceeeEEEEEccC----CcEEEEEEecCCc-chhhhccCCCCCCCchhhhHHHHHHHHHHHH
Q 047215          553 LAEFETEIEMLSKLRH--RHLVSLIGFCDEQ----NEMILVYEYMANG-TLRSHLFGSDLPPLTWKQRLDACIGAARGLH  625 (851)
Q Consensus       553 ~~~~~~Ei~~l~~l~H--pnIv~l~g~~~~~----~~~~lV~Ey~~~g-sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~  625 (851)
                      .....+|...+.+|..  -.+.+.+++.+..    ...++|+|++++. +|.+++.....  .+......++.++++.+.
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~  132 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIA  132 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHH
Confidence            3467788888888853  3455666666543    2458999999874 79888855322  556677889999999999


Q ss_pred             HhhcCCCCCeEEcCCCCCCeEEcCCC---eEEEeecccccc
Q 047215          626 YLHTGAERGIIHRDVKTTNILLDENF---VAKMSDFGLSKT  663 (851)
Q Consensus       626 yLHs~~~~~iiHrDlk~~NILld~~~---~~kl~DFGla~~  663 (851)
                      -||   ..+|+|+|+++.|||++.+.   .+.++||+.++.
T Consensus       133 ~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  133 KLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            999   49999999999999998877   899999998765

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.20  E-value=6.2e-06  Score=94.92  Aligned_cols=144  Identities=16%  Similarity=0.216  Sum_probs=97.1

Q ss_pred             CCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhH----------------------------------------
Q 047215          514 NFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGL----------------------------------------  553 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~----------------------------------------  553 (851)
                      .|+. +.|+.++-|+||+|++.+|+.||||+..+.-....                                        
T Consensus       127 eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~E  205 (517)
T COG0661         127 EFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREE  205 (517)
T ss_pred             HcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHH
Confidence            3443 47899999999999999999999999876532211                                        


Q ss_pred             HHHHHHHHHHHhcC-----CcceeeEEEEEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHH-HHHh
Q 047215          554 AEFETEIEMLSKLR-----HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARG-LHYL  627 (851)
Q Consensus       554 ~~~~~Ei~~l~~l~-----HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~g-L~yL  627 (851)
                      -++.+|...+.+++     .|++.-..=|.+-.+...|+|||++|-.+.+...... ...+.+.   ++..++++ +..+
T Consensus       206 lDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~---ia~~~~~~f~~q~  281 (517)
T COG0661         206 LDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKE---LAELLVRAFLRQL  281 (517)
T ss_pred             hCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHH---HHHHHHHHHHHHH
Confidence            01445666565553     3444433334444567899999999998888742222 2233333   33333322 2222


Q ss_pred             hcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       628 Hs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      -   ..+++|.|..|.||+++.++++.+.|||+.....
T Consensus       282 ~---~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~  316 (517)
T COG0661         282 L---RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLD  316 (517)
T ss_pred             H---hcCccccCCCccceEEecCCcEEEEcCcceecCC
Confidence            2   3789999999999999999999999999987543

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.19  E-value=1.8e-05  Score=82.27  Aligned_cols=139  Identities=13%  Similarity=0.158  Sum_probs=84.7

Q ss_pred             eeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcc--eeeEEEEEccCCcEEEEEEecCCcc-
Q 047215          519 LMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRH--LVSLIGFCDEQNEMILVYEYMANGT-  595 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~Hpn--Iv~l~g~~~~~~~~~lV~Ey~~~gs-  595 (851)
                      ..||+|..+.||+..   +...++|......  ......+|.++++.+..-.  +.+.++++...+...+|||+++|.+ 
T Consensus         7 ~~i~~G~t~~~y~~~---~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~   81 (226)
T TIGR02172         7 TQTGEGGNGESYTHK---TGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS   81 (226)
T ss_pred             eeecCCCCcceeEec---CCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence            468999999999842   3345677765433  2345688999999986433  4677888877778899999999863 


Q ss_pred             hhhhc---------------------cCCCCCCCchhhhHH-HHH----------HHH-HHHHHhhcC-CCCCeEEcCCC
Q 047215          596 LRSHL---------------------FGSDLPPLTWKQRLD-ACI----------GAA-RGLHYLHTG-AERGIIHRDVK  641 (851)
Q Consensus       596 L~~~L---------------------~~~~~~~l~~~~~~~-i~~----------~ia-~gL~yLHs~-~~~~iiHrDlk  641 (851)
                      +...+                     |.............. +-.          .+. ....+|... ....++|+|+.
T Consensus        82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~  161 (226)
T TIGR02172        82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ  161 (226)
T ss_pred             hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence            21111                     111000111000000 000          000 012222211 13457899999


Q ss_pred             CCCeEEcCCCeEEEeecccccc
Q 047215          642 TTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       642 ~~NILld~~~~~kl~DFGla~~  663 (851)
                      |.||++++++ +.++||+.+..
T Consensus       162 ~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       162 IGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             CCcEEEcCCC-cEEEechhcCc
Confidence            9999999888 99999998765

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.03  E-value=4.4e-05  Score=79.36  Aligned_cols=143  Identities=18%  Similarity=0.166  Sum_probs=85.3

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCc--ceeeEEEEEc---cCCcEEEEEEecC
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHR--HLVSLIGFCD---EQNEMILVYEYMA  592 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~Hp--nIv~l~g~~~---~~~~~~lV~Ey~~  592 (851)
                      ++.|+.|..+.||+....+ ..+++|.....  .....+..|..+++.+...  .+.+++.++.   .....+++|++++
T Consensus         2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            3578999999999999887 57788886554  4556788899999888533  3456666442   2334799999999


Q ss_pred             Ccchhh----------------hc---cCC--CCCCCchhh---------hHHH------------HHHHHH-HHHHhhc
Q 047215          593 NGTLRS----------------HL---FGS--DLPPLTWKQ---------RLDA------------CIGAAR-GLHYLHT  629 (851)
Q Consensus       593 ~gsL~~----------------~L---~~~--~~~~l~~~~---------~~~i------------~~~ia~-gL~yLHs  629 (851)
                      +..+..                .+   +..  ...+..+..         ....            ...+.+ .+..++.
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (239)
T PF01636_consen   79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA  158 (239)
T ss_dssp             SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence            988877                11   111  111111100         0000            011111 2333332


Q ss_pred             ----CCCCCeEEcCCCCCCeEEc-CCCeEEEeecccccc
Q 047215          630 ----GAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKT  663 (851)
Q Consensus       630 ----~~~~~iiHrDlk~~NILld-~~~~~kl~DFGla~~  663 (851)
                          .....++|+|+.+.|||++ +++++.|+||+.+..
T Consensus       159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             hhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence                1356799999999999999 667778999987654

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.03  E-value=0.00012  Score=73.82  Aligned_cols=103  Identities=22%  Similarity=0.262  Sum_probs=82.9

Q ss_pred             HHHHHHHHhcCC-cceeeEEEEEccCCcEEEEEEecCCcchhhhccC-CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCC
Q 047215          557 ETEIEMLSKLRH-RHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG-SDLPPLTWKQRLDACIGAARGLHYLHTGAERG  634 (851)
Q Consensus       557 ~~Ei~~l~~l~H-pnIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~-~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~  634 (851)
                      ..|.-+++.+.+ +++.+++|+|-.    +++.||...+++...-.. .....-+|..+.+||.++++.+++|++.....
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            358889999976 699999999943    689999998766432000 11124689999999999999999999766667


Q ss_pred             eEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          635 IIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       635 iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      +...|++++|+-+++++++|++|...+..
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~  111 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFV  111 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEechhcch
Confidence            99999999999999999999999987643

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.98  E-value=7.8e-05  Score=78.60  Aligned_cols=139  Identities=17%  Similarity=0.178  Sum_probs=85.2

Q ss_pred             eeeecc-eEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEEEEEecCCcchhh
Q 047215          521 IGVGGF-GKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILVYEYMANGTLRS  598 (851)
Q Consensus       521 LG~G~f-G~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~~  598 (851)
                      |-.|.. ..||+...++ ..+.+|+.....   .....+|+++++.+. +--+.+++++...++..++|||+++|.+|..
T Consensus         6 ~~~g~~~~~v~~~~~~~-~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~   81 (244)
T cd05150           6 VTEGQSGATVYRLDGKN-PGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA   81 (244)
T ss_pred             cCCCCCcCeEEEEcCCC-CcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence            444554 7889987654 567778776543   345678999998884 4445577887776667899999999987764


Q ss_pred             hc-------------------cCCCCC--CCc--hhhhHHHHH--------------------HHHHHHHHhhc----CC
Q 047215          599 HL-------------------FGSDLP--PLT--WKQRLDACI--------------------GAARGLHYLHT----GA  631 (851)
Q Consensus       599 ~L-------------------~~~~~~--~l~--~~~~~~i~~--------------------~ia~gL~yLHs----~~  631 (851)
                      ..                   +.....  +..  .......+.                    .+...+..|-.    ..
T Consensus        82 ~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (244)
T cd05150          82 LWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEE  161 (244)
T ss_pred             hhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcC
Confidence            32                   111100  110  000000000                    01111222211    11


Q ss_pred             CCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       632 ~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      ...++|+|+.+.|||++++..+.|+||+.+..
T Consensus       162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             ceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence            35589999999999999988889999998754

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.96  E-value=8.5e-07  Score=100.24  Aligned_cols=180  Identities=19%  Similarity=0.120  Sum_probs=130.2

Q ss_pred             eeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcc-eeeEEEEEccCCcEEEEEEecCCc-chh
Q 047215          520 MIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRH-LVSLIGFCDEQNEMILVYEYMANG-TLR  597 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~Hpn-Iv~l~g~~~~~~~~~lV~Ey~~~g-sL~  597 (851)
                      .+++|++++++|.+--..+....+.+...     ....-++++|.+++||| .+..++-++.+...+++++++..+ +..
T Consensus       249 ~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~  323 (829)
T KOG0576|consen  249 NFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSA  323 (829)
T ss_pred             HHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcccc
Confidence            47899999999987444344445544432     34466899999999999 788888888888999999999887 222


Q ss_pred             hhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccc
Q 047215          598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK  677 (851)
Q Consensus       598 ~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~  677 (851)
                      .... ...-.+..-+...+++.-+++|++||+   ..-+|||    ||+..+ ...|..||+.........   ......
T Consensus       324 ~~~~-~se~~~~~~~~~~~~r~et~~l~~l~~---~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~---~~~t~~  391 (829)
T KOG0576|consen  324 LEMT-VSEIALEQYQFAYPLRKETRPLAELHS---SYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM---KPRTAI  391 (829)
T ss_pred             ccCC-hhhHhhhhhhhhhhhhhhccccccccc---ccccCcc----cccccc-cccccccccCCcccCccc---ccccCC
Confidence            2111 111123334556677778899999996   3358888    777655 678999999876543321   344567


Q ss_pred             cCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCC
Q 047215          678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVI  716 (851)
Q Consensus       678 gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~  716 (851)
                      +|+.|+|||+.....+..+.|+|+.++-..++--|-+|-
T Consensus       392 ~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr  430 (829)
T KOG0576|consen  392 GTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR  430 (829)
T ss_pred             CCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence            899999999999999999999999998777776665543

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.89  E-value=0.00012  Score=75.10  Aligned_cols=152  Identities=20%  Similarity=0.199  Sum_probs=100.3

Q ss_pred             ccCHHHHHHHhcCCceee---eeeeecceEEEEEEEcCcceeEEeecCCCChhhH------------------------H
Q 047215          502 RFTLAEIRVATNNFDESL---MIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGL------------------------A  554 (851)
Q Consensus       502 ~~~~~~l~~~t~~f~~~~---~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~------------------------~  554 (851)
                      ..++..+....++..+..   .|..|.-+.||+|.-.++..+|+|+.........                        .
T Consensus        34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~  113 (268)
T COG1718          34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA  113 (268)
T ss_pred             hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence            345555555555554444   4557888899999988888999998654321110                        1


Q ss_pred             HHHHHHHHHHhcC--CcceeeEEEEEccCCcEEEEEEecCCcc-hhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCC
Q 047215          555 EFETEIEMLSKLR--HRHLVSLIGFCDEQNEMILVYEYMANGT-LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA  631 (851)
Q Consensus       555 ~~~~Ei~~l~~l~--HpnIv~l~g~~~~~~~~~lV~Ey~~~gs-L~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~  631 (851)
                      -..+|..-|+++.  +-.+.+.+++..    -.|||||+.... -.-.|...   ++...+...+..++++.+.-|-.  
T Consensus       114 W~~kEf~NL~R~~eAGVrvP~Pi~~~~----nVLvMEfIg~~g~pAP~LkDv---~~e~~e~~~~~~~~v~~~~~l~~--  184 (268)
T COG1718         114 WARKEFRNLKRAYEAGVRVPEPIAFRN----NVLVMEFIGDDGLPAPRLKDV---PLELEEAEGLYEDVVEYMRRLYK--  184 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCceeecC----CeEEEEeccCCCCCCCCcccC---CcCchhHHHHHHHHHHHHHHHHH--
Confidence            1345777788773  555666666653    379999996541 11122111   12222456666677777777763  


Q ss_pred             CCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       632 ~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      ..++||+||..-|||+. ++.+.|+|+|-|..
T Consensus       185 ~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~  215 (268)
T COG1718         185 EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVT  215 (268)
T ss_pred             hcCcccccchhhheEEE-CCeEEEEECccccc
Confidence            47899999999999999 88999999998764

>PLN02876 acyl-CoA dehydrogenase

Probab=97.81  E-value=0.00025  Score=88.00  Aligned_cols=79  Identities=18%  Similarity=0.315  Sum_probs=57.5

Q ss_pred             eeeeeeecceEEEEEEEcCc---ceeEEeecCCCC-hhhHHHHHHHHHHHHhcC-Ccce--eeEEEEEccC---CcEEEE
Q 047215          518 SLMIGVGGFGKVFKGEIEDC---TLAAIKRANPQS-EQGLAEFETEIEMLSKLR-HRHL--VSLIGFCDEQ---NEMILV  587 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~---~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-HpnI--v~l~g~~~~~---~~~~lV  587 (851)
                      .+.++.|.+..+|+-+..++   ..+++|+..... ......+.+|.++|+.+. |+++  .+++++|.+.   +..++|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            55689999999999876654   345666654432 223457889999999995 6665  7888888664   467899


Q ss_pred             EEecCCcch
Q 047215          588 YEYMANGTL  596 (851)
Q Consensus       588 ~Ey~~~gsL  596 (851)
                      |||+++..+
T Consensus       123 ME~v~G~~~  131 (822)
T PLN02876        123 MEYLEGRIF  131 (822)
T ss_pred             EEecCCccc
Confidence            999998654

>KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms]

Probab=97.81  E-value=1.3e-05  Score=81.75  Aligned_cols=71  Identities=21%  Similarity=0.532  Sum_probs=62.5

Q ss_pred             chhhHHHhhccCCCcccccccceeeeeecCCCCceEEEEEeeeEEEecCCeEEEEEEEc-CccccCCcchhhhcCCCCce
Q 047215          276 PLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYIN-NRTAENNFDIFVQAGGKNRG  354 (851)
Q Consensus       276 P~~vy~tA~~~~~~~~~~~~~~lt~~~~vd~~~~Y~v~LhF~Ei~~~~~~~R~FdI~in-~~~~~~~~di~~~~~~~~~~  354 (851)
                      ...+|||+|....        .|.|..|.+..+.|.+.|.|||+++...++.+|||-+| ++.+.+++||+-..|+-+.+
T Consensus       107 d~ily~ter~nee--------tFgyd~pik~dgdyalvlkfaevyF~~~q~kvfdvrln~sh~vVk~ldi~~~vg~rg~A  178 (355)
T KOG3593|consen  107 DIILYQTERYNEE--------TFGYDVPIKEDGDYALVLKFAEVYFKTCQHKVFDVRLNCSHCVVKALDIFDQVGDRGKA  178 (355)
T ss_pred             hhhhhhhcccchh--------hhcccccccCCCceehhhhHHHHHHHhhhhhheeeeeccceeEEeccchhhhcCCCccc
Confidence            6779999999533        36788898888999999999999999999999999999 99999999999998855544

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.75  E-value=0.00048  Score=70.10  Aligned_cols=138  Identities=17%  Similarity=0.150  Sum_probs=90.0

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHH---------HHHHHHHHHhcCC---cceeeEEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAE---------FETEIEMLSKLRH---RHLVSLIGFC  578 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~---------~~~Ei~~l~~l~H---pnIv~l~g~~  578 (851)
                      ..++|...+++-......|.+-..++ ...++|..........+.         ..+++..+.+++-   -....++.++
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIei~~-~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~  107 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIEIDG-KKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA  107 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEEECC-cEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence            45778887777777766676666555 566888776654332222         2344554444432   2222222222


Q ss_pred             -----ccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeE
Q 047215          579 -----DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA  653 (851)
Q Consensus       579 -----~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~  653 (851)
                           .-....+|+|||++|-.|.++..      ++.    .++-.++..+.-||   +.|+.|+|..|.|+++.+++ +
T Consensus       108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH---~~G~~HGD~hpgNFlv~~~~-i  173 (229)
T PF06176_consen  108 EKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLH---KHGFYHGDPHPGNFLVSNNG-I  173 (229)
T ss_pred             eeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHH---HcCCccCCCCcCcEEEECCc-E
Confidence                 22345679999999988866531      222    24455677899999   59999999999999998654 9


Q ss_pred             EEeecccccc
Q 047215          654 KMSDFGLSKT  663 (851)
Q Consensus       654 kl~DFGla~~  663 (851)
                      +++||+..+.
T Consensus       174 ~iID~~~k~~  183 (229)
T PF06176_consen  174 RIIDTQGKRM  183 (229)
T ss_pred             EEEECccccc
Confidence            9999987654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.71  E-value=0.00014  Score=83.63  Aligned_cols=138  Identities=17%  Similarity=0.189  Sum_probs=90.1

Q ss_pred             eeeeeecceEEEEEEEcCcceeEEeecCCCChhhH-------------------------------------HHHHHHHH
Q 047215          519 LMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGL-------------------------------------AEFETEIE  561 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~-------------------------------------~~~~~Ei~  561 (851)
                      +.||.-+.|+||+|++++|+.||||+..+.-+...                                     -+|.+|.+
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~  246 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK  246 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence            46999999999999999999999998876532210                                     01445555


Q ss_pred             HHHhc----CCcc------eeeEEEEEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCC
Q 047215          562 MLSKL----RHRH------LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA  631 (851)
Q Consensus       562 ~l~~l----~Hpn------Iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~  631 (851)
                      -..++    .|-+      |.+++  ..-.....|+||||+|..+.|.-.-.. ..++...+..-+.++..-+-     .
T Consensus       247 Nae~~~~~f~~~~~~~~V~VP~Vy--~~~st~RVLtME~~~G~~i~Dl~~i~~-~gi~~~~i~~~l~~~~~~qI-----f  318 (538)
T KOG1235|consen  247 NAERFRENFKDFSLLTYVLVPKVY--WDLSTKRVLTMEYVDGIKINDLDAIDK-RGISPHDILNKLVEAYLEQI-----F  318 (538)
T ss_pred             hHHHHHHHHHhcccccceeCCeeh--hhcCcceEEEEEecCCccCCCHHHHHH-cCCCHHHHHHHHHHHHHHHH-----H
Confidence            44443    3444      22222  233457799999999998876642211 12344443333333221122     2


Q ss_pred             CCCeEEcCCCCCCeEEcC----CCeEEEeeccccccC
Q 047215          632 ERGIIHRDVKTTNILLDE----NFVAKMSDFGLSKTG  664 (851)
Q Consensus       632 ~~~iiHrDlk~~NILld~----~~~~kl~DFGla~~~  664 (851)
                      ..|++|+|-.|.||++..    ++++.+-|||+....
T Consensus       319 ~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i  355 (538)
T KOG1235|consen  319 KTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI  355 (538)
T ss_pred             hcCCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence            468999999999999983    678999999998753

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.62  E-value=0.00077  Score=68.31  Aligned_cols=128  Identities=24%  Similarity=0.292  Sum_probs=88.4

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCC----------------hhhHHHHHHHHHHHHhcC------CcceeeEE
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQS----------------EQGLAEFETEIEMLSKLR------HRHLVSLI  575 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~----------------~~~~~~~~~Ei~~l~~l~------HpnIv~l~  575 (851)
                      ...||+|+.-.||.  +.+....+||+.....                .....+..+|+.-..++.      +.+|.+++
T Consensus         6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             CcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            44799999999984  3444445777766554                223456777777776666      88999999


Q ss_pred             EEEccCCcEEEEEEecCC--c----chhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC
Q 047215          576 GFCDEQNEMILVYEYMAN--G----TLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE  649 (851)
Q Consensus       576 g~~~~~~~~~lV~Ey~~~--g----sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~  649 (851)
                      |+.+++.-.-+|+|.+..  |    +|.+++....   ++. +..+.+.+   -..||-   +..|+.+|++|.||++..
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~---~~~-~~~~~L~~---f~~~l~---~~~Iv~~dl~~~NIv~~~  153 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG---LTE-ELRQALDE---FKRYLL---DHHIVIRDLNPHNIVVQR  153 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC---ccH-HHHHHHHH---HHHHHH---HcCCeecCCCcccEEEEe
Confidence            999999999999998743  2    4677774332   444 33333333   345555   477999999999999942


Q ss_pred             ---CC-eEEEee
Q 047215          650 ---NF-VAKMSD  657 (851)
Q Consensus       650 ---~~-~~kl~D  657 (851)
                         .. .+.|+|
T Consensus       154 ~~~~~~~lvlID  165 (199)
T PF10707_consen  154 RDSGEFRLVLID  165 (199)
T ss_pred             cCCCceEEEEEe
Confidence               22 577777

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.59  E-value=0.00062  Score=71.38  Aligned_cols=139  Identities=16%  Similarity=0.153  Sum_probs=76.8

Q ss_pred             eeeeeecce-EEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCc---ceeeEEEEEccC---CcEEEEEEec
Q 047215          519 LMIGVGGFG-KVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHR---HLVSLIGFCDEQ---NEMILVYEYM  591 (851)
Q Consensus       519 ~~LG~G~fG-~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~Hp---nIv~l~g~~~~~---~~~~lV~Ey~  591 (851)
                      +.|+.|+.. .||+..    ..+++|.....  .....+.+|.++|..+...   -+.+.++.+...   ...+++|+++
T Consensus         3 ~~~~~gG~~n~vy~~~----~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i   76 (235)
T cd05155           3 EPVDSGGTDNATFRLG----DDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL   76 (235)
T ss_pred             eeccCCCcccceEEcC----CceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence            457777766 488742    24566664432  2345788999999888532   344445544332   2348899999


Q ss_pred             CCcchhhhc------------------cCCCCCC--C-------------chhhhH--HHH-------HHHHHH-HH-Hh
Q 047215          592 ANGTLRSHL------------------FGSDLPP--L-------------TWKQRL--DAC-------IGAARG-LH-YL  627 (851)
Q Consensus       592 ~~gsL~~~L------------------~~~~~~~--l-------------~~~~~~--~i~-------~~ia~g-L~-yL  627 (851)
                      +|.++.+..                  |.-....  .             .|....  .+.       .+.+.. +. ++
T Consensus        77 ~G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  156 (235)
T cd05155          77 EGETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRHNFLRGGDLAVRDAETREAIEALEGVIDVDAARALWEAAL  156 (235)
T ss_pred             cCCCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCccccCCCChhHhhHHHHHHHHHcccccChHHHHHHHHHHh
Confidence            997764331                  1110000  0             011000  000       011111 11 11


Q ss_pred             hc--CCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          628 HT--GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       628 Hs--~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      +.  .....++|+|+.+.|||++++...-|+||+.+..
T Consensus       157 ~~~~~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~  194 (235)
T cd05155         157 RAPWWGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV  194 (235)
T ss_pred             cccccCCceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence            11  0234589999999999999876677999998765

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK10593 hypothetical protein; Provisional

Probab=97.43  E-value=0.0019  Score=70.20  Aligned_cols=77  Identities=13%  Similarity=0.043  Sum_probs=56.2

Q ss_pred             eeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCC---cceeeEEEEEcc---CCcEEEEEEe
Q 047215          517 ESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRH---RHLVSLIGFCDE---QNEMILVYEY  590 (851)
Q Consensus       517 ~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H---pnIv~l~g~~~~---~~~~~lV~Ey  590 (851)
                      ..+.||.|..+.||+-...+++ +.+|..+...  ....|..|.+.|+.|.-   -.+.+++++|..   .+..+||||+
T Consensus        18 ~~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~   94 (297)
T PRK10593         18 RVECISEQPYAALWALYDSQGN-PMPLMARSFS--TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER   94 (297)
T ss_pred             eeeecCCccceeEEEEEcCCCC-EEEEEecccc--cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence            3557999999999998766554 4556533211  23578899999998853   367788888754   4678999999


Q ss_pred             cCCcch
Q 047215          591 MANGTL  596 (851)
Q Consensus       591 ~~~gsL  596 (851)
                      ++++++
T Consensus        95 i~G~~~  100 (297)
T PRK10593         95 LRGVSV  100 (297)
T ss_pred             cCCEec
Confidence            998765

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.33  E-value=0.00076  Score=81.98  Aligned_cols=198  Identities=22%  Similarity=0.224  Sum_probs=133.9

Q ss_pred             HHHHHHHHHHHHhcCCcceeeEEEEEccCCcE----EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 047215          553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM----ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLH  628 (851)
Q Consensus       553 ~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~----~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH  628 (851)
                      .....-|+..+..+.|+|++.++.|-.++...    .+..|++..-++..++...  ...+....+....++.+||.|+|
T Consensus       226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v--~~i~~~~~r~~~~~~~~GL~~~h  303 (1351)
T KOG1035|consen  226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV--GSIPLETLRILHQKLLEGLAYLH  303 (1351)
T ss_pred             HHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc--cccCHHHHHHHHHHHhhhHHHHH
Confidence            34455688888999999999999997554333    3445677777777777443  45677888888999999999999


Q ss_pred             cCCCCCeEEcCCCCC---CeEEcCCCeEEEe--eccccccCCCCCccccccccccCCcccCcccccccCCCch--HHHHH
Q 047215          629 TGAERGIIHRDVKTT---NILLDENFVAKMS--DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEK--SDVYS  701 (851)
Q Consensus       629 s~~~~~iiHrDlk~~---NILld~~~~~kl~--DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k--sDVwS  701 (851)
                      +   ....|.-+..+   +-..+.++.+.++  ||+..+..+......   ...-+..+.+||......++.+  .|+|+
T Consensus       304 ~---~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~---~~~~~~~~~~~e~~~~~~~~~~r~~dL~~  377 (1351)
T KOG1035|consen  304 S---LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF---SDLLAEIRNADEDLKENTAKKSRLTDLWC  377 (1351)
T ss_pred             H---hccceeEEecccccccccCccceeecchhhhcccccCCCcccch---hhcCccccccccccccccchhhhhhHHHH
Confidence            6   44445444444   4444566777777  888877654433221   1223456788887766555444  79999


Q ss_pred             HHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHH
Q 047215          702 FGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEV  781 (851)
Q Consensus       702 ~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev  781 (851)
                      +|..+..+..|..+.....                      .+.+-+.    ........+...+|+..++++|++..++
T Consensus       378 lgll~~~~~~~~~i~~~~~----------------------~~~~~l~----~~~~~~~~d~~~~~~~~~~~~Rl~~~~l  431 (1351)
T KOG1035|consen  378 LGLLLLQLSQGEDISEKSA----------------------VPVSLLD----VLSTSELLDALPKCLDEDSEERLSALEL  431 (1351)
T ss_pred             HHHHHhhhhhcCccccccc----------------------chhhhhc----cccchhhhhhhhhhcchhhhhccchhhh
Confidence            9999999998864322110                      0000010    0111146788999999999999999999


Q ss_pred             HHH
Q 047215          782 LWH  784 (851)
Q Consensus       782 l~~  784 (851)
                      +.|
T Consensus       432 l~~  434 (1351)
T KOG1035|consen  432 LTH  434 (1351)
T ss_pred             hhc
Confidence            999

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.30  E-value=0.0013  Score=69.85  Aligned_cols=137  Identities=16%  Similarity=0.140  Sum_probs=77.3

Q ss_pred             eeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcce-eeEEEEEccCCcEEEEEEecCCcchhhh
Q 047215          521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHL-VSLIGFCDEQNEMILVYEYMANGTLRSH  599 (851)
Q Consensus       521 LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnI-v~l~g~~~~~~~~~lV~Ey~~~gsL~~~  599 (851)
                      +..|-...+|+... ++..+++|..........-+..+|.++++.+....+ .++++.+.    -++||||+++..+...
T Consensus         4 ~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~~   78 (256)
T TIGR02721         4 LSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITLD   78 (256)
T ss_pred             CCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcccccc
Confidence            45677788998873 445667776544322211245789999998864333 34444432    3699999998765431


Q ss_pred             -----------------ccCCC--CCCCchhhhH-HHH---------HHHHHHHHHhhc-----CCCCCeEEcCCCCCCe
Q 047215          600 -----------------LFGSD--LPPLTWKQRL-DAC---------IGAARGLHYLHT-----GAERGIIHRDVKTTNI  645 (851)
Q Consensus       600 -----------------L~~~~--~~~l~~~~~~-~i~---------~~ia~gL~yLHs-----~~~~~iiHrDlk~~NI  645 (851)
                                       ||...  ..+++....+ ...         ..+...+..+-.     .....++|+|+.+.||
T Consensus        79 ~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Ni  158 (256)
T TIGR02721        79 QFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNL  158 (256)
T ss_pred             cccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcE
Confidence                             11111  1111111111 100         011111222211     1134689999999999


Q ss_pred             EEcCCCeEEEeecccccc
Q 047215          646 LLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       646 Lld~~~~~kl~DFGla~~  663 (851)
                      ++++++ +.|+||..+..
T Consensus       159 l~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       159 VVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             EEeCCC-CEEEeccccCc
Confidence            999876 78999998765

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.28  E-value=0.0028  Score=63.85  Aligned_cols=125  Identities=27%  Similarity=0.378  Sum_probs=88.9

Q ss_pred             cCCceeeeeeeecc-eEEEEEEEcCcceeEEeecCC---CCh------------------hhHHHHHHHHHHHHhcC---
Q 047215          513 NNFDESLMIGVGGF-GKVFKGEIEDCTLAAIKRANP---QSE------------------QGLAEFETEIEMLSKLR---  567 (851)
Q Consensus       513 ~~f~~~~~LG~G~f-G~Vykg~~~~~~~vavK~~~~---~~~------------------~~~~~~~~Ei~~l~~l~---  567 (851)
                      .+++..+.||.|.- |.|||.++.+. .+|+|....   ...                  .-...|..|.+...+|+   
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~g~-~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEIDGR-IYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEECCe-EEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            78888999999999 99999998765 789998221   110                  11235888999988885   


Q ss_pred             Ccce--eeEEEEEccC------------------CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHh
Q 047215          568 HRHL--VSLIGFCDEQ------------------NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYL  627 (851)
Q Consensus       568 HpnI--v~l~g~~~~~------------------~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yL  627 (851)
                      +.++  |+++||..-.                  ....||.||++...           .++    .+-+.++.+-|..+
T Consensus       116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~----~~~~~~~~~dl~~~  180 (207)
T PF13095_consen  116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQ----IRDIPQMLRDLKIL  180 (207)
T ss_pred             ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccc----hhHHHHHHHHHHHH
Confidence            4566  9999997211                  12357777775422           122    23345666778889


Q ss_pred             hcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccc
Q 047215          628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       628 Hs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla  661 (851)
                      |   +.+|+-+|+|+.|..     .-||+|||.+
T Consensus       181 ~---k~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  181 H---KLGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             H---HCCeeeccCcccccc-----CCEEEecccC
Confidence            9   599999999999986     4589999864

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.27  E-value=0.0099  Score=66.77  Aligned_cols=75  Identities=19%  Similarity=0.180  Sum_probs=53.9

Q ss_pred             eeeeeecceEEEEEEEcCc-ceeEEeecCCCC-------hhhHHHHHHHHHHHHhcC---CcceeeEEEEEccCCcEEEE
Q 047215          519 LMIGVGGFGKVFKGEIEDC-TLAAIKRANPQS-------EQGLAEFETEIEMLSKLR---HRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~~-~~vavK~~~~~~-------~~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~~~~~~~~lV  587 (851)
                      +.||-|.+..||+....++ +.++||...+..       +...+.+..|.+.|+.+.   ..++.+++.+..  ...++|
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~--~~~~lV  109 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE--ELAVTV  109 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC--CCCEEE
Confidence            4689999999999998877 478899754221       224556778888888863   245667777743  457899


Q ss_pred             EEecCCcc
Q 047215          588 YEYMANGT  595 (851)
Q Consensus       588 ~Ey~~~gs  595 (851)
                      |||+++..
T Consensus       110 ME~L~~~~  117 (401)
T PRK09550        110 MEDLSDHK  117 (401)
T ss_pred             EecCCCcc
Confidence            99998643

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.27  E-value=0.0029  Score=66.11  Aligned_cols=140  Identities=18%  Similarity=0.202  Sum_probs=80.7

Q ss_pred             eeeeeecceEEEEEEEcC--cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcce-eeEEEEEccCCcEEEEEEecCCcc
Q 047215          519 LMIGVGGFGKVFKGEIED--CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHL-VSLIGFCDEQNEMILVYEYMANGT  595 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~--~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnI-v~l~g~~~~~~~~~lV~Ey~~~gs  595 (851)
                      +.|..|-...+|+....+  +..+++|........ ..+-.+|+.+++.+...++ .++++.+..    .++|||+++.+
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~~----~~l~e~i~G~~   78 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQN----GLIYEFIPGRT   78 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeCC----cEEEEeeCCCc
Confidence            457778888999988664  566778866543222 2233578999998854333 344444332    48999999876


Q ss_pred             hhhh-------c----------cCCCC---------CCC-chhhhHHH-------------------------HHHHHHH
Q 047215          596 LRSH-------L----------FGSDL---------PPL-TWKQRLDA-------------------------CIGAARG  623 (851)
Q Consensus       596 L~~~-------L----------~~~~~---------~~l-~~~~~~~i-------------------------~~~ia~g  623 (851)
                      +...       +          |....         ... .|..+..+                         +.+.+..
T Consensus        79 l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  158 (235)
T cd05157          79 LEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISW  158 (235)
T ss_pred             CCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHH
Confidence            5321       0          11110         011 11111111                         1111111


Q ss_pred             H-HHhhc-CCCCCeEEcCCCCCCeEEcC-CCeEEEeecccccc
Q 047215          624 L-HYLHT-GAERGIIHRDVKTTNILLDE-NFVAKMSDFGLSKT  663 (851)
Q Consensus       624 L-~yLHs-~~~~~iiHrDlk~~NILld~-~~~~kl~DFGla~~  663 (851)
                      | ..+.. .....++|+|+.+.|||+++ +..+.++||..+..
T Consensus       159 l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~  201 (235)
T cd05157         159 LKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY  201 (235)
T ss_pred             HHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence            1 11111 12356999999999999997 57899999988765

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.21  E-value=0.0015  Score=63.73  Aligned_cols=127  Identities=21%  Similarity=0.250  Sum_probs=83.7

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcchh
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR  597 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~  597 (851)
                      .+.|++|.+|.||+|.+.++ .+|+|+....++  ...+..|.++|..+.--++.+=+-.+..   -.+.|||..|-.|.
T Consensus        27 ~~~L~KG~~s~Vyl~~~~~~-~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~yg~---~~i~me~i~G~~L~  100 (201)
T COG2112          27 EKELAKGTTSVVYLGEWRGG-EVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFYGE---DFIRMEYIDGRPLG  100 (201)
T ss_pred             hhhhhcccccEEEEeeccCc-eEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEech---hhhhhhhhcCcchh
Confidence            45799999999999998876 567776654433  4578899999999987666544333322   23559999987876


Q ss_pred             hhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCC-C-CCeEEcCCCeEEEeecccccc
Q 047215          598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVK-T-TNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       598 ~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk-~-~NILld~~~~~kl~DFGla~~  663 (851)
                      +.-...     +.+++.+    +++.---|.   ..||-|+.|. | +||++.+ ..+.|+||.-|..
T Consensus       101 ~~~~~~-----~rk~l~~----vlE~a~~LD---~~GI~H~El~~~~k~vlv~~-~~~~iIDFd~At~  155 (201)
T COG2112         101 KLEIGG-----DRKHLLR----VLEKAYKLD---RLGIEHGELSRPWKNVLVND-RDVYIIDFDSATF  155 (201)
T ss_pred             hhhhcc-----cHHHHHH----HHHHHHHHH---HhccchhhhcCCceeEEecC-CcEEEEEccchhh
Confidence            654221     2233333    333322222   4678888887 4 4555544 4999999998874

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.13  E-value=0.0039  Score=67.65  Aligned_cols=142  Identities=19%  Similarity=0.181  Sum_probs=85.1

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcc--eeeEEEE------EccCCcEEEEEE
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRH--LVSLIGF------CDEQNEMILVYE  589 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~Hpn--Iv~l~g~------~~~~~~~~lV~E  589 (851)
                      .+.|..|....+|+...+++ .+++|+....   .......|++++..+.+.+  +.+++..      ...++..++|++
T Consensus        19 i~~i~~G~~n~~y~v~~~~~-~~vLr~~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~   94 (296)
T cd05153          19 FEGISAGIENTNYFVTTDSG-RYVLTLFEKV---SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE   94 (296)
T ss_pred             eecccCccccceEEEEeCCC-cEEEEEcCCC---ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence            45677787789999876555 5677876542   2345677888888885332  4454442      123456789999


Q ss_pred             ecCCcchhh----hc----------cC--CC--C-----CCCchhhhH----------HHHHHHHHHHHHhhc----CCC
Q 047215          590 YMANGTLRS----HL----------FG--SD--L-----PPLTWKQRL----------DACIGAARGLHYLHT----GAE  632 (851)
Q Consensus       590 y~~~gsL~~----~L----------~~--~~--~-----~~l~~~~~~----------~i~~~ia~gL~yLHs----~~~  632 (851)
                      |++|..+..    .+          |.  ..  .     ....|....          .....+...+.++..    ...
T Consensus        95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~  174 (296)
T cd05153          95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP  174 (296)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence            999876532    00          10  00  0     011222111          011112333444432    124


Q ss_pred             CCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          633 RGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       633 ~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .+++|+|+.|.|||++++..+.|.||+.+..
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            5799999999999999988789999998754

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=96.79  E-value=0.0088  Score=65.18  Aligned_cols=140  Identities=24%  Similarity=0.293  Sum_probs=82.6

Q ss_pred             eeeeeecceEEEEEEEcC-------cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcce-eeEEEEEccCCcEEEEEEe
Q 047215          519 LMIGVGGFGKVFKGEIED-------CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHL-VSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~-------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnI-v~l~g~~~~~~~~~lV~Ey  590 (851)
                      +.|..|-...+|+....+       +..+++|+..... ....+..+|.+++..+...++ .++++++..    .+|+||
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~   78 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEF   78 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhe
Confidence            345666677899887655       4667778755433 223455788888888853333 355555542    368999


Q ss_pred             cCCcchhhh-c----------------cCCCCC---------CCchhhhHH--------------------------HHH
Q 047215          591 MANGTLRSH-L----------------FGSDLP---------PLTWKQRLD--------------------------ACI  618 (851)
Q Consensus       591 ~~~gsL~~~-L----------------~~~~~~---------~l~~~~~~~--------------------------i~~  618 (851)
                      ++|..+... +                |.....         +.-|..+..                          +..
T Consensus        79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (302)
T cd05156          79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE  158 (302)
T ss_pred             eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence            998776431 1                111111         011111100                          111


Q ss_pred             HHHHHHHHhhc------CCCCCeEEcCCCCCCeEEcCC----CeEEEeecccccc
Q 047215          619 GAARGLHYLHT------GAERGIIHRDVKTTNILLDEN----FVAKMSDFGLSKT  663 (851)
Q Consensus       619 ~ia~gL~yLHs------~~~~~iiHrDlk~~NILld~~----~~~kl~DFGla~~  663 (851)
                      .+..-+..|..      .....++|+|+.+.|||++++    +.++++||..+..
T Consensus       159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            22222334431      135679999999999999874    8899999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PRK05231 homoserine kinase; Provisional

Probab=96.67  E-value=0.024  Score=62.32  Aligned_cols=141  Identities=16%  Similarity=0.199  Sum_probs=77.0

Q ss_pred             eeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcc--eeeEEE------EEccCCcEEEEEEe
Q 047215          519 LMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRH--LVSLIG------FCDEQNEMILVYEY  590 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~Hpn--Iv~l~g------~~~~~~~~~lV~Ey  590 (851)
                      +.|+.|....+|+...+++ .+++|+......   .....|+.++..|...+  +.+.+.      +....+..++++||
T Consensus        28 ~~l~~G~~n~~y~v~t~~g-~~vLK~~~~~~~---~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~  103 (319)
T PRK05231         28 KGIAEGIENSNFFLTTTQG-EYVLTLFERLTA---EDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTF  103 (319)
T ss_pred             chhccccccceEEEEeCCC-cEEEEEeccCCh---HHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEe
Confidence            4566777788999886666 467787652222   33344556665553211  233332      11234567899999


Q ss_pred             cCCcchhh-----------hc---cCC--C-------CCCC-chhhhHHHH------------HH-HHHHHHHhhc----
Q 047215          591 MANGTLRS-----------HL---FGS--D-------LPPL-TWKQRLDAC------------IG-AARGLHYLHT----  629 (851)
Q Consensus       591 ~~~gsL~~-----------~L---~~~--~-------~~~l-~~~~~~~i~------------~~-ia~gL~yLHs----  629 (851)
                      ++|..+..           .|   |..  .       ...+ .|.+...-.            .+ +...+..+..    
T Consensus       104 l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  183 (319)
T PRK05231        104 LEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWP  183 (319)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhccccc
Confidence            99875421           01   110  0       0011 122111111            11 1112223321    


Q ss_pred             CCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       630 ~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      ....++||+|+.+.|||++.+...-|+||+.+..
T Consensus       184 ~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        184 ALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             cCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence            1346899999999999999776678999998764

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.50  E-value=0.04  Score=59.87  Aligned_cols=122  Identities=18%  Similarity=0.248  Sum_probs=78.7

Q ss_pred             cceeEEeecCC--CChhhHHHHHHHHHHHHhcCC--cceeeEEEEEccCC--cEEEEEEecCCcchhhhccCCCCCCCch
Q 047215          537 CTLAAIKRANP--QSEQGLAEFETEIEMLSKLRH--RHLVSLIGFCDEQN--EMILVYEYMANGTLRSHLFGSDLPPLTW  610 (851)
Q Consensus       537 ~~~vavK~~~~--~~~~~~~~~~~Ei~~l~~l~H--pnIv~l~g~~~~~~--~~~lV~Ey~~~gsL~~~L~~~~~~~l~~  610 (851)
                      ++..++. ...  ..........+|..+|+.+.-  .-+...+++|..+.  ..+.||+|+++..+.+.+.....     
T Consensus        48 ~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~-----  121 (321)
T COG3173          48 GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESL-----  121 (321)
T ss_pred             CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCcccc-----
Confidence            4455555 221  233445566788888888743  33456678887666  77999999998655444322110     


Q ss_pred             hhhHHHH-HHHHHHHHHhhc-------------------------------------------------------CCCCC
Q 047215          611 KQRLDAC-IGAARGLHYLHT-------------------------------------------------------GAERG  634 (851)
Q Consensus       611 ~~~~~i~-~~ia~gL~yLHs-------------------------------------------------------~~~~~  634 (851)
                      .  .+.+ ..+++.|.-||+                                                       .....
T Consensus       122 ~--~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~~~~  199 (321)
T COG3173         122 G--RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAGPPV  199 (321)
T ss_pred             h--HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCCCce
Confidence            1  1122 244555555553                                                       12456


Q ss_pred             eEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       635 iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ++|+|+.+.|++++++..+=|.||+++....+
T Consensus       200 lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP  231 (321)
T COG3173         200 LVHGDYRPGNLIIDPGRPTGVLDWELATLGDP  231 (321)
T ss_pred             eeeCCcccCCEEEeCCCeeEEEeccccccCCc
Confidence            99999999999999888899999999987543

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=96.46  E-value=0.041  Score=60.12  Aligned_cols=143  Identities=15%  Similarity=0.146  Sum_probs=82.9

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcc--eeeEEEEE------ccCCcEEEEEE
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRH--LVSLIGFC------DEQNEMILVYE  589 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~Hpn--Iv~l~g~~------~~~~~~~lV~E  589 (851)
                      .+.++.|....+|+....+++ +++|+.....  .......|++++..|....  +.+++...      ...+..++++|
T Consensus        27 i~~~~~G~~n~~y~v~t~~~~-~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e  103 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTTDVGR-YILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVE  103 (307)
T ss_pred             ccccCCccccceEEEEeCCCc-EEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEE
Confidence            456777777899988766554 5677654422  1234556777777774322  34444322      23456789999


Q ss_pred             ecCCcchhhh--------------ccC--CC--CC------CCchhhhHH------------HHHHHHHHHHHhhc----
Q 047215          590 YMANGTLRSH--------------LFG--SD--LP------PLTWKQRLD------------ACIGAARGLHYLHT----  629 (851)
Q Consensus       590 y~~~gsL~~~--------------L~~--~~--~~------~l~~~~~~~------------i~~~ia~gL~yLHs----  629 (851)
                      |++|..+...              +|.  ..  ..      .-.|.....            ....+...++++..    
T Consensus       104 ~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~  183 (307)
T TIGR00938       104 FLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPR  183 (307)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhh
Confidence            9988654211              111  00  00      011211110            01122334555532    


Q ss_pred             CCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       630 ~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      ....+++|+|+.+.||++++++.+.|+||+.+..
T Consensus       184 ~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~  217 (307)
T TIGR00938       184 DLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT  217 (307)
T ss_pred             cCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence            2357899999999999999888778999998754

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=96.34  E-value=0.0053  Score=65.27  Aligned_cols=132  Identities=18%  Similarity=0.126  Sum_probs=88.9

Q ss_pred             ceeeeeeeecceEEEEEEEcCcceeEEeecCCCC-----------------hh-----hHHHHHHHHHHHHhcC-C-cce
Q 047215          516 DESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQS-----------------EQ-----GLAEFETEIEMLSKLR-H-RHL  571 (851)
Q Consensus       516 ~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~-----------------~~-----~~~~~~~Ei~~l~~l~-H-pnI  571 (851)
                      ...+.||-|.-+.+|.+-..+|++.++|.-....                 ..     ..-...+|...|+.|. | --|
T Consensus        95 svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfpV  174 (465)
T KOG2268|consen   95 SVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFPV  174 (465)
T ss_pred             hhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCCC
Confidence            4456899999999999999888888877432110                 00     1123556888888884 3 234


Q ss_pred             eeEEEEEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC
Q 047215          572 VSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF  651 (851)
Q Consensus       572 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~  651 (851)
                      .+.+++    +..++|||++.+-.|...-+-.+     ..++   .-.+..-+.-|.   ++|+||+|..-=||+++++.
T Consensus       175 PkpiD~----~RH~Vvmelv~g~Pl~~v~~v~d-----~~~l---y~~lm~~Iv~la---~~GlIHgDFNEFNimv~dd~  239 (465)
T KOG2268|consen  175 PKPIDH----NRHCVVMELVDGYPLRQVRHVED-----PPTL---YDDLMGLIVRLA---NHGLIHGDFNEFNIMVKDDD  239 (465)
T ss_pred             CCcccc----cceeeHHHhhcccceeeeeecCC-----hHHH---HHHHHHHHHHHH---HcCceecccchheeEEecCC
Confidence            455554    46789999998877765532222     2222   222333333444   58999999999999999999


Q ss_pred             eEEEeeccccc
Q 047215          652 VAKMSDFGLSK  662 (851)
Q Consensus       652 ~~kl~DFGla~  662 (851)
                      .++++||--..
T Consensus       240 ~i~vIDFPQmv  250 (465)
T KOG2268|consen  240 KIVVIDFPQMV  250 (465)
T ss_pred             CEEEeechHhh
Confidence            99999996543

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=96.19  E-value=0.055  Score=58.15  Aligned_cols=31  Identities=26%  Similarity=0.441  Sum_probs=26.0

Q ss_pred             CCeEEcCCCCCCeEEcCCCe-EEEeecccccc
Q 047215          633 RGIIHRDVKTTNILLDENFV-AKMSDFGLSKT  663 (851)
Q Consensus       633 ~~iiHrDlk~~NILld~~~~-~kl~DFGla~~  663 (851)
                      ..++|+|+++.|||++++++ .-|.||+.+..
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            34899999999999997554 56999998876

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=96.10  E-value=0.032  Score=60.13  Aligned_cols=75  Identities=20%  Similarity=0.299  Sum_probs=47.9

Q ss_pred             ceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcC---CcceeeEEEEEccCCcEEEEEEecC
Q 047215          516 DESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR---HRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       516 ~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      +..+.|+-|....+|+.. .+++.+.||...   ......|..|.+-|+.|.   --.+.+.+++...++..+||+||++
T Consensus        20 ~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~   95 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLD-TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLE   95 (288)
T ss_dssp             -EEEEE--SSSSEEEEEE-TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE---
T ss_pred             eeeEecCCCChhheEEEE-CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeec
Confidence            345678888899999877 566677888766   233356888999998883   3457788888877777799999998


Q ss_pred             Cc
Q 047215          593 NG  594 (851)
Q Consensus       593 ~g  594 (851)
                      .+
T Consensus        96 ~~   97 (288)
T PF03881_consen   96 MG   97 (288)
T ss_dssp             --
T ss_pred             CC
Confidence            77

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PLN02236 choline kinase

Probab=96.03  E-value=0.054  Score=60.18  Aligned_cols=139  Identities=17%  Similarity=0.205  Sum_probs=79.6

Q ss_pred             eeeeecceEEEEEEEcC-----cceeEEeecCCCChhhHHHHHHHHHHHHhcCCccee-eEEEEEccCCcEEEEEEecCC
Q 047215          520 MIGVGGFGKVFKGEIED-----CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLV-SLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~~-----~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv-~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      .|-.|-.-.+|+....+     +..+++|.......... +-.+|..+++.+..-++. ++++.+..+    .|+||+++
T Consensus        43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~i-dR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~g  117 (344)
T PLN02236         43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFF-DRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIHA  117 (344)
T ss_pred             EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeee-chHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeCC
Confidence            34446677888877532     24567777655443322 237799999988544443 455655432    58999987


Q ss_pred             cchhhh-----------------ccCCCC----CCCchhhhHHHHHH-----------------HHHHHHH----hhc-C
Q 047215          594 GTLRSH-----------------LFGSDL----PPLTWKQRLDACIG-----------------AARGLHY----LHT-G  630 (851)
Q Consensus       594 gsL~~~-----------------L~~~~~----~~l~~~~~~~i~~~-----------------ia~gL~y----LHs-~  630 (851)
                      .+|...                 +|....    ....|.++.+...+                 +...+..    +.. .
T Consensus       118 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~  197 (344)
T PLN02236        118 RTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDD  197 (344)
T ss_pred             CCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccC
Confidence            666421                 111110    01123322222211                 1111111    221 1


Q ss_pred             CCCCeEEcCCCCCCeEEcC-CCeEEEeecccccc
Q 047215          631 AERGIIHRDVKTTNILLDE-NFVAKMSDFGLSKT  663 (851)
Q Consensus       631 ~~~~iiHrDlk~~NILld~-~~~~kl~DFGla~~  663 (851)
                      ....++|+|+++.|||+++ ++.++++||..+..
T Consensus       198 ~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        198 QEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             CCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence            2456899999999999976 47899999988764

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=95.57  E-value=0.0028  Score=78.77  Aligned_cols=159  Identities=16%  Similarity=0.037  Sum_probs=110.1

Q ss_pred             HHHHHHHHHhcCCcceeeEEEEE--ccCCcEEEEEEecCCcchhhhccCCC--CCCCchhhhHHHHHHHHHHHHHhhcCC
Q 047215          556 FETEIEMLSKLRHRHLVSLIGFC--DEQNEMILVYEYMANGTLRSHLFGSD--LPPLTWKQRLDACIGAARGLHYLHTGA  631 (851)
Q Consensus       556 ~~~Ei~~l~~l~HpnIv~l~g~~--~~~~~~~lV~Ey~~~gsL~~~L~~~~--~~~l~~~~~~~i~~~ia~gL~yLHs~~  631 (851)
                      ...|...++...|+++.....-.  .+..+.+..++|+..|.+.+.|-+..  .+++...-+...-.+......-+|+..
T Consensus      1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred             hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence            44455556667898887665544  34567799999999999999874432  233333333322233244444445322


Q ss_pred             --CCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHH
Q 047215          632 --ERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV  709 (851)
Q Consensus       632 --~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eL  709 (851)
                        ..-.+|+++|+.|.+|..+.++|+.++|+.+...+.  ........+++-|+.|+......++.++|+|..|+.++++
T Consensus      1356 nlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~--~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~r 1433 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPV--LSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLR 1433 (2724)
T ss_pred             cCCccchhhhhhhhccceecCCcccccccccccccCch--HhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence              234789999999999999999999999999842221  1123344577789999999999999999999999999998


Q ss_pred             HhCCcCC
Q 047215          710 VCARAVI  716 (851)
Q Consensus       710 ltG~~p~  716 (851)
                      --|..++
T Consensus      1434 s~~n~~f 1440 (2724)
T KOG1826|consen 1434 SDGNAYF 1440 (2724)
T ss_pred             hcccHHH
Confidence            7665443

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=94.86  E-value=0.17  Score=55.12  Aligned_cols=140  Identities=18%  Similarity=0.157  Sum_probs=92.2

Q ss_pred             ceeeeeeeecceEEEEEEEcCcceeEEeecCCC-----Ch--------------------h-hHHHHHHHHHHHHhcCCc
Q 047215          516 DESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQ-----SE--------------------Q-GLAEFETEIEMLSKLRHR  569 (851)
Q Consensus       516 ~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~-----~~--------------------~-~~~~~~~Ei~~l~~l~Hp  569 (851)
                      ++..+|..|.-+.||.+.-.+|..+|||+.+-.     .+                    . -.--...|++-|.+|+..
T Consensus       147 ~inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a  226 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA  226 (520)
T ss_pred             ecccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            345678999999999999999999999975421     00                    0 011244688888888654


Q ss_pred             ceeeEEEEEccCCcEEEEEEecCCcc-hhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc
Q 047215          570 HLVSLIGFCDEQNEMILVYEYMANGT-LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD  648 (851)
Q Consensus       570 nIv~l~g~~~~~~~~~lV~Ey~~~gs-L~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld  648 (851)
                      .|...--...  ....|||+|+.... -.-.|..   ..++...+..+-.+++.-|.-|..  ..++||.||.--|+|+-
T Consensus       227 GIP~PePIlL--k~hVLVM~FlGrdgw~aPkLKd---~~ls~~ka~~~Y~~~v~~MR~lY~--~c~LVHADLSEfN~Lyh  299 (520)
T KOG2270|consen  227 GIPCPEPILL--KNHVLVMEFLGRDGWAAPKLKD---ASLSTSKARELYQQCVRIMRRLYQ--KCRLVHADLSEFNLLYH  299 (520)
T ss_pred             CCCCCCceee--ecceEeeeeccCCCCcCccccc---ccCChHHHHHHHHHHHHHHHHHHH--HhceeccchhhhhheEE
Confidence            4332211111  23479999986422 2222322   235555666677777777777775  67899999999999984


Q ss_pred             CCCeEEEeecccccc
Q 047215          649 ENFVAKMSDFGLSKT  663 (851)
Q Consensus       649 ~~~~~kl~DFGla~~  663 (851)
                       +|.+.|+|-+-+..
T Consensus       300 -dG~lyiIDVSQSVE  313 (520)
T KOG2270|consen  300 -DGKLYIIDVSQSVE  313 (520)
T ss_pred             -CCEEEEEEcccccc
Confidence             56899999876643

>PLN02756 S-methyl-5-thioribose kinase

Probab=94.82  E-value=0.37  Score=54.23  Aligned_cols=73  Identities=16%  Similarity=0.116  Sum_probs=49.4

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCCh-------hhHHHHHHHHHHHHhcC---CcceeeEEEEEccCCcEEEE
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSE-------QGLAEFETEIEMLSKLR---HRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~-------~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~~~~~~~~lV  587 (851)
                      .+.||-|....||+.... +..++||+..+...       .....-..|.+.|+.+.   ..++.+++.+|.  +..+++
T Consensus        37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlv  113 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIG  113 (418)
T ss_pred             EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEE
Confidence            456899999999998764 34578887652211       12333344567776653   347888999987  446889


Q ss_pred             EEecCC
Q 047215          588 YEYMAN  593 (851)
Q Consensus       588 ~Ey~~~  593 (851)
                      ||++++
T Consensus       114 ME~L~~  119 (418)
T PLN02756        114 MRYLEP  119 (418)
T ss_pred             EeecCC
Confidence            999977

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=94.56  E-value=0.11  Score=56.45  Aligned_cols=103  Identities=17%  Similarity=0.164  Sum_probs=69.2

Q ss_pred             CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccc
Q 047215          582 NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla  661 (851)
                      ...|++|++. +++|. .+     ....|++.+.++++.+.-++-|..  +.+.-|||+...||||+ +|.+-|+||-++
T Consensus       299 ~y~yl~~kdh-gt~is-~i-----k~~~~~e~lsff~s~~sil~~lek--kf~fehrnlt~~niLId-~GnvtLIDfkls  368 (488)
T COG5072         299 LYLYLHFKDH-GTPIS-II-----KADRSEEELSFFWSCISILDILEK--KFPFEHRNLTLDNILID-EGNVTLIDFKLS  368 (488)
T ss_pred             eEEEEEEecC-Cceee-ee-----ecccHHHHHHHHHHHHHHHhhhhh--cCCcccccccccceeee-cCceEEEEeeee
Confidence            3446666654 33442 22     335689999999999888888875  77899999999999999 999999999999


Q ss_pred             ccCCCCCccccccccccCCcccCcccccccCCCchHHHHHH
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSF  702 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~  702 (851)
                      |.......       ..-...-.|-.+.+.. +.+-+||-+
T Consensus       369 Rl~~~q~~-------isy~rldhp~lF~G~d-d~QFeIYrl  401 (488)
T COG5072         369 RLSYSQGI-------ISYNRLDHPDLFNGVD-DYQFEIYRL  401 (488)
T ss_pred             ecccCCce-------eeccccCchhhhcCcc-ceeeeHHHH
Confidence            96333211       1112233454554333 556666653

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=94.53  E-value=0.29  Score=54.08  Aligned_cols=79  Identities=24%  Similarity=0.269  Sum_probs=49.0

Q ss_pred             eeeeecceEEEEEEEcCc-ceeEEeecCCC-------ChhhHHHHHHHHHHHHhcC--Cccee-eEEEEEccCCcEEEEE
Q 047215          520 MIGVGGFGKVFKGEIEDC-TLAAIKRANPQ-------SEQGLAEFETEIEMLSKLR--HRHLV-SLIGFCDEQNEMILVY  588 (851)
Q Consensus       520 ~LG~G~fG~Vykg~~~~~-~~vavK~~~~~-------~~~~~~~~~~Ei~~l~~l~--HpnIv-~l~g~~~~~~~~~lV~  588 (851)
                      .||-|....||++...++ +.++||...+.       -+.......-|.+.|+...  -|..| +++.+  ++....+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence            478899999999997654 46888864321       1333445566777777663  35444 44433  334557999


Q ss_pred             EecCCc-chhhhc
Q 047215          589 EYMANG-TLRSHL  600 (851)
Q Consensus       589 Ey~~~g-sL~~~L  600 (851)
                      |+++.. .|+..|
T Consensus        80 EdL~~~~ilR~~L   92 (370)
T TIGR01767        80 EDLSHHKIARKGL   92 (370)
T ss_pred             hhCccchHHHHHH
Confidence            998553 343433

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=94.47  E-value=0.35  Score=52.83  Aligned_cols=32  Identities=16%  Similarity=0.235  Sum_probs=28.9

Q ss_pred             CCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       632 ~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      ..+++|+|+.+.|||+++++.+.++||..+..
T Consensus       195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~  226 (309)
T TIGR02904       195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASF  226 (309)
T ss_pred             ceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence            45799999999999999999999999988765

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=94.47  E-value=0.35  Score=53.17  Aligned_cols=136  Identities=24%  Similarity=0.273  Sum_probs=80.0

Q ss_pred             cceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcC---Ccc---eeeEEE----EEccCCcEEEEEEecCCc
Q 047215          525 GFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR---HRH---LVSLIG----FCDEQNEMILVYEYMANG  594 (851)
Q Consensus       525 ~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~---Hpn---Iv~l~g----~~~~~~~~~lV~Ey~~~g  594 (851)
                      .-..||+....++.. ++|.....  ....+...|+..|..|.   .+=   |..+=|    ....+...+-+++|++|.
T Consensus        37 ~eN~~f~~~~~~g~~-iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~  113 (331)
T COG2334          37 EENSNFRVQTEDGRY-ILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGR  113 (331)
T ss_pred             ccCceEEEEecCCCe-EEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCCc
Confidence            456788888888777 77776654  33456667888887773   222   222222    112223788999999998


Q ss_pred             chhh-hc--------------c----C------CCCCCCchhh-------------hHHHHHHHHHHHHHhhcC----CC
Q 047215          595 TLRS-HL--------------F----G------SDLPPLTWKQ-------------RLDACIGAARGLHYLHTG----AE  632 (851)
Q Consensus       595 sL~~-~L--------------~----~------~~~~~l~~~~-------------~~~i~~~ia~gL~yLHs~----~~  632 (851)
                      .+.. .-              +    +      .......|..             ......++...+..+++.    ..
T Consensus       114 ~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp  193 (331)
T COG2334         114 PLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLP  193 (331)
T ss_pred             CcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhCC
Confidence            8773 11              0    0      0011233430             111222333334444321    12


Q ss_pred             CC---eEEcCCCCCCeEEcCCCe-EEEeecccccc
Q 047215          633 RG---IIHRDVKTTNILLDENFV-AKMSDFGLSKT  663 (851)
Q Consensus       633 ~~---iiHrDlk~~NILld~~~~-~kl~DFGla~~  663 (851)
                      ..   +||+|+.+.||+++.+.. +.+.||+-+..
T Consensus       194 ~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~  228 (331)
T COG2334         194 ALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAGY  228 (331)
T ss_pred             cccceeeecCCCccceeEcCCCCeeeEEEcccccc
Confidence            22   999999999999998874 89999998764

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=94.22  E-value=0.051  Score=39.11  Aligned_cols=20  Identities=15%  Similarity=0.302  Sum_probs=8.6

Q ss_pred             CcceEeeeehhhHHHHHHHH
Q 047215          420 NKWILLVGIGAGIASVVVLA  439 (851)
Q Consensus       420 ~~~~~~i~i~~~i~~vvll~  439 (851)
                      ++....+++++++.++++++
T Consensus         7 ~~~~vaIa~~VvVPV~vI~~   26 (40)
T PF08693_consen    7 NSNTVAIAVGVVVPVGVIII   26 (40)
T ss_pred             CCceEEEEEEEEechHHHHH
Confidence            34444444444444433333

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=94.19  E-value=0.33  Score=52.92  Aligned_cols=31  Identities=32%  Similarity=0.433  Sum_probs=26.6

Q ss_pred             CCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       632 ~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      ..+++|+|+.+.||+++. +.+.|+||+.+..
T Consensus       186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~  216 (313)
T TIGR02906       186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYCTI  216 (313)
T ss_pred             cCceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence            467999999999999987 5788999997654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=94.15  E-value=0.035  Score=62.57  Aligned_cols=47  Identities=21%  Similarity=0.334  Sum_probs=35.8

Q ss_pred             HHHHHHHHHHhcCCcceeeEEEEEccC-CcEEEEEEecCCcchhhhccC
Q 047215          555 EFETEIEMLSKLRHRHLVSLIGFCDEQ-NEMILVYEYMANGTLRSHLFG  602 (851)
Q Consensus       555 ~~~~Ei~~l~~l~HpnIv~l~g~~~~~-~~~~lV~Ey~~~gsL~~~L~~  602 (851)
                      .......+++.+.|+|+...+.+.... ....+|+|++. .+|.+.+..
T Consensus        28 ~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~-~Sled~~~~   75 (725)
T KOG1093|consen   28 QILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYT-MSLEDILKT   75 (725)
T ss_pred             HHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhc-cchHHHHHh
Confidence            345567788999999999999988544 34688899884 488887743

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=94.11  E-value=0.19  Score=51.64  Aligned_cols=31  Identities=26%  Similarity=0.360  Sum_probs=22.0

Q ss_pred             CCeEEcCCCCCCeEE-cCCCeEEEeecccccc
Q 047215          633 RGIIHRDVKTTNILL-DENFVAKMSDFGLSKT  663 (851)
Q Consensus       633 ~~iiHrDlk~~NILl-d~~~~~kl~DFGla~~  663 (851)
                      ..++|.|+.+.|||+ +.++.++++||..+..
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            457899999999999 8899999999988754

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	851
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		5e-91
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-90
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		4e-51
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		3e-50
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-35
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-35
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		9e-35
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		1e-32
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		5e-22
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		6e-22
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		6e-22
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		4e-21
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		5e-21
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		5e-21
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-19
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		2e-19
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-19
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		2e-19
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		2e-19
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		2e-19
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		2e-19
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		2e-19
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		2e-19
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		2e-19
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		2e-19
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		2e-19
3b2t_A	311	Structure Of Phosphotransferase Length = 311		2e-19
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		2e-19
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-19
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-19
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		3e-19
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-19
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-19
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		3e-19
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-19
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		3e-19
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		4e-19
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		4e-19
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		4e-19
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		5e-19
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		5e-19
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		6e-19
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		6e-19
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		6e-19
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		6e-19
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		7e-19
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		7e-19
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		7e-19
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		7e-19
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		7e-19
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		8e-19
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		8e-19
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		8e-19
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-19
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		1e-18
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		1e-18
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-18
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		1e-18
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		2e-18
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-18
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		2e-18
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		2e-18
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-18
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-18
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		3e-18
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		4e-18
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		5e-18
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		9e-18
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		9e-18
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-17
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		1e-17
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		1e-17
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		3e-17
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		4e-17
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		5e-17
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		6e-17
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		6e-17
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		7e-17
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		7e-17
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		7e-17
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		7e-17
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		7e-17
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-17
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		8e-17
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		9e-17
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		9e-17
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		9e-17
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		9e-17
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		1e-16
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		1e-16
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		1e-16
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		1e-16
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		1e-16
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		1e-16
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		1e-16
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		2e-16
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-16
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		2e-16
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		2e-16
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		2e-16
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		2e-16
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		2e-16
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		2e-16
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		2e-16
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		2e-16
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		2e-16
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		2e-16
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-16
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		2e-16
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		2e-16
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		2e-16
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		2e-16
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		2e-16
4h58_A	275	Braf In Complex With Compound 3 Length = 275		2e-16
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		3e-16
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		3e-16
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		3e-16
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		3e-16
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		3e-16
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		3e-16
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		3e-16
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		3e-16
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		3e-16
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		3e-16
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		3e-16
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		3e-16
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		4e-16
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		4e-16
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		4e-16
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		4e-16
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		4e-16
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		5e-16
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		5e-16
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		5e-16
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		6e-16
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		6e-16
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		6e-16
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		6e-16
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-16
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		8e-16
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		9e-16
1fvr_A	327	Tie2 Kinase Domain Length = 327		1e-15
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-15
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		1e-15
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		3e-15
3a4o_X	286	Lyn Kinase Domain Length = 286		3e-15
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		3e-15
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		5e-15
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		6e-15
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		6e-15
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		6e-15
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		6e-15
2pl0_A	289	Lck Bound To Imatinib Length = 289		7e-15
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		8e-15
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		1e-14
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		1e-14
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		1e-14
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		1e-14
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-14
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		1e-14
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		1e-14
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		1e-14
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		1e-14
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-14
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-14
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-14
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		2e-14
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		2e-14
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		2e-14
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		3e-14
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		3e-14
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		3e-14
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		3e-14
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		3e-14
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		5e-14
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		5e-14
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		5e-14
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		6e-14
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		7e-14
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		9e-14
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		9e-14
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		9e-14
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		9e-14
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		1e-13
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		1e-13
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		1e-13
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		2e-13
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		2e-13
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		2e-13
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-13
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		2e-13
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		3e-13
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		4e-13
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		4e-13
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		4e-13
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		4e-13
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		4e-13
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		5e-13
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-13
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		5e-13
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		5e-13
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		5e-13
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		5e-13
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		6e-13
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		6e-13
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		6e-13
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		6e-13
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-13
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		6e-13
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		7e-13
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-13
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		7e-13
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		7e-13
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-13
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		7e-13
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		8e-13
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		9e-13
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		9e-13
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		1e-12
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		1e-12
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		1e-12
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		1e-12
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		1e-12
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		1e-12
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		1e-12
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-12
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-12
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-12
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		2e-12
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-12
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-12
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-12
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-12
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-12
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		2e-12
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-12
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-12
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		2e-12
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-12
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		2e-12
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		2e-12
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-12
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-12
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		2e-12
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		3e-12
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		3e-12
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		3e-12
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		3e-12
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		3e-12
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		3e-12
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		3e-12
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		3e-12
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		3e-12
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		4e-12
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		4e-12
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		4e-12
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-12
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		4e-12
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		5e-12
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		5e-12
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		5e-12
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		5e-12
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		5e-12
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		5e-12
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		5e-12
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		5e-12
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		5e-12
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		5e-12
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		5e-12
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		6e-12
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		6e-12
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		6e-12
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		6e-12
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		6e-12
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		7e-12
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		7e-12
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		7e-12
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		7e-12
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		7e-12
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		8e-12
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		8e-12
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		9e-12
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		9e-12
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		9e-12
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		9e-12
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		9e-12
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		9e-12
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-11
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		1e-11
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		1e-11
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-11
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-11
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-11
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-11
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-11
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		1e-11
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		1e-11
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		1e-11
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		2e-11
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-11
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-11
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		2e-11
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-11
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-11
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		2e-11
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-11
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		2e-11
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-11
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		3e-11
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		3e-11
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		3e-11
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		3e-11
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		3e-11
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		3e-11
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		3e-11
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-11
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		4e-11
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		4e-11
3g51_A	325	Structural Diversity Of The Active Conformation Of		4e-11
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		4e-11
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		4e-11
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		4e-11
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		4e-11
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		4e-11
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		4e-11
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		4e-11
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		4e-11
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		4e-11
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		4e-11
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		4e-11
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		4e-11
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		5e-11
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		5e-11
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		5e-11
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		5e-11
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		5e-11
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		5e-11
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		5e-11
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		5e-11
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		5e-11
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		5e-11
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		5e-11
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		5e-11
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		5e-11
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		5e-11
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-11
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		5e-11
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		6e-11
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		6e-11
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		6e-11
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		6e-11
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		6e-11
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		6e-11
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		6e-11
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		6e-11
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		6e-11
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		7e-11
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		7e-11
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		7e-11
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		7e-11
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		7e-11
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		7e-11
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		7e-11
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		8e-11
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		8e-11
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		8e-11
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		9e-11
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		9e-11
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		9e-11
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		9e-11
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-10
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		1e-10
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		1e-10
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		1e-10
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		1e-10
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-10
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		1e-10
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		1e-10
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		1e-10
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		1e-10
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		1e-10
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		1e-10
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		1e-10
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		1e-10
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		1e-10
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		1e-10
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		1e-10
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		1e-10
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		1e-10
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		1e-10
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		1e-10
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-10
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		1e-10
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		1e-10
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		1e-10
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-10
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-10
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		2e-10
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		2e-10
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		2e-10
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		2e-10
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		2e-10
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		2e-10
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		2e-10
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		2e-10
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		2e-10
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		2e-10
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		3e-10
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		3e-10
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		3e-10
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		3e-10
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-10
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		3e-10
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		4e-10
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		4e-10
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		4e-10
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		5e-10
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		5e-10
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		5e-10
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		5e-10
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		5e-10
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		5e-10
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		5e-10
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		5e-10
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		5e-10
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		6e-10
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		6e-10
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		6e-10
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		6e-10
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		6e-10
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		6e-10
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		6e-10
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		6e-10
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		6e-10
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		7e-10
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		7e-10
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		7e-10
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		8e-10
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		9e-10
4fl2_A	636	Structural And Biophysical Characterization Of The		9e-10
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		9e-10
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		9e-10
4fl3_A	635	Structural And Biophysical Characterization Of The		9e-10
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		9e-10
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		9e-10
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		1e-09
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		1e-09
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		1e-09
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		1e-09
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		1e-09
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		1e-09
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		1e-09
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		1e-09
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		1e-09
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-09
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		1e-09
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		1e-09
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		1e-09
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		2e-09
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		2e-09
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		2e-09
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		2e-09
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-09
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-09
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-09
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-09
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		2e-09
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-09
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		2e-09
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		3e-09
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		3e-09
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		3e-09
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		3e-09
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		3e-09
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-09
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		3e-09
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-09
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		3e-09
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		3e-09
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		3e-09
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		3e-09
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		3e-09
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		3e-09
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		3e-09
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		3e-09
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		4e-09
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-09
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		4e-09
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		4e-09
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		4e-09
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		4e-09
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		4e-09
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		4e-09
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		4e-09
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		5e-09
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		5e-09
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		5e-09
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-09
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		6e-09
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		6e-09
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		6e-09
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		6e-09
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		6e-09
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-09
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		6e-09
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		7e-09
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		7e-09
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-09
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		7e-09
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-09
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		7e-09
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		7e-09
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		8e-09
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		8e-09
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		9e-09
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		9e-09
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		9e-09
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		9e-09
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		1e-08
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		1e-08
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		1e-08
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-08
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		1e-08
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		1e-08
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		1e-08
4fie_A	423	Full-Length Human Pak4 Length = 423		1e-08
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-08
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-08
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		1e-08
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		1e-08
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		1e-08
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		1e-08
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		2e-08
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-08
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-08
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		2e-08
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		2e-08
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		2e-08
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-08
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		2e-08
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		2e-08
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-08
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		2e-08
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		2e-08
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-08
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-08
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		3e-08
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		3e-08
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-08
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		3e-08
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-08
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		3e-08
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		3e-08
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		3e-08
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		3e-08
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		3e-08
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		3e-08
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-08
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		3e-08
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		3e-08
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		3e-08
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		3e-08
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-08
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		3e-08
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		3e-08
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-08
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		3e-08
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		3e-08
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		3e-08
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		4e-08
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		4e-08
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		4e-08
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		4e-08
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		4e-08
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		5e-08
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-08
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-08
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		5e-08
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		5e-08
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		5e-08
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		6e-08
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		6e-08
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		6e-08
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		7e-08
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		7e-08
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		7e-08
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		7e-08
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		7e-08
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		7e-08
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-08
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		7e-08
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		7e-08
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		8e-08
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		8e-08
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		8e-08
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		8e-08
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		8e-08
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		8e-08
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		8e-08
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		8e-08
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		8e-08
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		8e-08
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		8e-08
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		8e-08
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		9e-08
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		9e-08
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		9e-08
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		9e-08
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		9e-08
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		9e-08
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		9e-08
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		9e-08
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		9e-08
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		9e-08
3hec_A	348	P38 In Complex With Imatinib Length = 348		9e-08
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		9e-08
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		9e-08
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		9e-08
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		9e-08
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		9e-08
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		9e-08
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		9e-08
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		9e-08
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		9e-08
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		9e-08
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		9e-08
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		1e-07
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		1e-07
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		1e-07
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		1e-07
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-07
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		1e-07
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		1e-07
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		1e-07
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-07
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		1e-07
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-07
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		1e-07
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-07
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-07
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-07
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-07
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		1e-07
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		1e-07
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		1e-07
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		1e-07
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		1e-07
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		1e-07
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-07
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-07
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		1e-07
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		1e-07
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		1e-07
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		1e-07
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		1e-07
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		1e-07
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		1e-07
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-07
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-07
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		1e-07
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		1e-07
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		1e-07
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		1e-07
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		1e-07
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		1e-07
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		1e-07
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		1e-07
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		1e-07
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		1e-07
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		1e-07
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		1e-07
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		1e-07
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		1e-07
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		1e-07
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		1e-07
3kk8_A	284	Camkii Substrate Complex A Length = 284		1e-07
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		1e-07
3kk9_A	282	Camkii Substrate Complex B Length = 282		1e-07
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		1e-07
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		2e-07
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		2e-07
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		2e-07
2oza_B	366	Structure Of P38alpha Complex Length = 366		2e-07
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-07
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		2e-07
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		2e-07
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		2e-07
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-07
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-07
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		2e-07
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		2e-07
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		2e-07
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		2e-07
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-07
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		2e-07
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		2e-07
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		2e-07
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-07
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-07
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		2e-07
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		3e-07
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		3e-07
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		3e-07
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		3e-07
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		3e-07
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		3e-07
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		3e-07
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		3e-07
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		3e-07
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		4e-07
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		4e-07
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		4e-07
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		4e-07
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		4e-07
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		4e-07
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		4e-07
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		4e-07
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		4e-07
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		4e-07
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-07
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		4e-07
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-07
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		5e-07
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		5e-07
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		5e-07
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		5e-07
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		6e-07
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		6e-07
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		6e-07
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		7e-07
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		7e-07
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		7e-07
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		7e-07
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		7e-07
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		7e-07
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		7e-07
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		7e-07
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		7e-07
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		7e-07
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		8e-07
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		8e-07
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		8e-07
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		8e-07
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		9e-07
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		9e-07
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		9e-07
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		9e-07
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		1e-06
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-06
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		1e-06
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		1e-06
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-06
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		1e-06
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		1e-06
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		1e-06
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		1e-06
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		1e-06
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		1e-06
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		1e-06
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		1e-06
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		1e-06
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		1e-06
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		1e-06
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-06
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		1e-06
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-06
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		1e-06
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		1e-06
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-06
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		2e-06
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-06
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		2e-06
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		2e-06
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-06
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		2e-06
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		2e-06
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		3e-06
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		3e-06
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		3e-06
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		3e-06
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		3e-06
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		3e-06
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		3e-06
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		3e-06
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		4e-06
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		4e-06
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		4e-06
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		4e-06
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		4e-06
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		4e-06
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		4e-06
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		4e-06
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		4e-06
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		4e-06
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		5e-06
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		5e-06
2oza_A	356	Structure Of P38alpha Complex Length = 356		5e-06
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		5e-06
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		5e-06
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		5e-06
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		5e-06
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		5e-06
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		6e-06
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		7e-06
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		7e-06
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		7e-06
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		7e-06
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		8e-06
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		8e-06
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		9e-06
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		9e-06
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		9e-06
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		9e-06
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		9e-06
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		9e-06
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		9e-06
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		9e-06
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		9e-06
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		9e-06
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		1e-05
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-05
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		1e-05
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		1e-05
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		1e-05
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		1e-05
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		1e-05
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		1e-05
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		1e-05
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		1e-05
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		1e-05
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		1e-05
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		1e-05
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		1e-05
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		1e-05
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		1e-05
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		1e-05
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		1e-05
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		1e-05
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		2e-05
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		2e-05
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		2e-05
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		2e-05
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		2e-05
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		2e-05
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		2e-05
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		2e-05
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		2e-05
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		2e-05
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-05
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		2e-05
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-05
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		2e-05
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		2e-05
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		3e-05
3soa_A	444	Full-Length Human Camkii Length = 444		3e-05
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		3e-05
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		3e-05
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		3e-05
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		4e-05
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		4e-05
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		4e-05
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		4e-05
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		4e-05
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		4e-05
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		4e-05
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		4e-05
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		4e-05
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		5e-05
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		5e-05
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		5e-05
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		5e-05
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		5e-05
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		5e-05
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		5e-05
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		5e-05
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		5e-05
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		5e-05
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		5e-05
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		6e-05
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		6e-05
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		6e-05
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		6e-05
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		7e-05
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		7e-05
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		7e-05
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		7e-05
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		7e-05
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		7e-05
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		8e-05
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		8e-05
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		8e-05
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		9e-05
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		9e-05
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		9e-05
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		9e-05
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		9e-05
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		1e-04
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		1e-04
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		1e-04
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		1e-04
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		1e-04
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		1e-04
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		1e-04
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		1e-04
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		2e-04
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		2e-04
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		2e-04
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		2e-04
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		2e-04
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-04
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		2e-04
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		2e-04
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		2e-04
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		2e-04
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		2e-04
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		2e-04
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		2e-04
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		2e-04
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		2e-04
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		2e-04
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		2e-04
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		2e-04
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-04
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		2e-04
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		2e-04
4ae9_A	343	Structure And Function Of The Human Sperm-specific		2e-04
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-04
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		2e-04
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		2e-04
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-04
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		2e-04
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		2e-04
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-04
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		2e-04
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		2e-04
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		3e-04
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		3e-04
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		3e-04
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		3e-04
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		3e-04
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		3e-04
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		3e-04
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		3e-04
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		4e-04
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-04
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		4e-04
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		4e-04
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		4e-04
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		4e-04
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		4e-04
4ae6_A	343	Structure And Function Of The Human Sperm-specific		4e-04
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		4e-04
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		4e-04
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-04
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		4e-04
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		4e-04
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		4e-04
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		4e-04
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-04
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		4e-04
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		4e-04
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		4e-04
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		4e-04
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		4e-04
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		4e-04
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		4e-04
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		4e-04
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		4e-04
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		4e-04
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		4e-04
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		5e-04
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		5e-04
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		5e-04
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		5e-04
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		5e-04
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		5e-04
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		5e-04
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		5e-04
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		5e-04
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		5e-04
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		5e-04
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		5e-04
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		5e-04
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		5e-04
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		5e-04
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		5e-04
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		6e-04
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		8e-04
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		9e-04

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score =  332 bits (851), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 166/295 (56%), Positives = 211/295 (71%), Gaps = 5/295 (1%)
Query: 502 RFTLAEIRVATNNFDESLMXXXXXXXXXXXXXXXDCTLAAIKRANPQSEQGLAEFETEIE 561
           R  L ++  ATNNFD   +               D    A+KR  P+S QG+ EFETEIE
Sbjct: 28  RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 562 MLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLP--PLTWKQRLDACIG 619
            LS  RH HLVSLIGFCDE+NEMIL+Y+YM NG L+ HL+GSDLP   ++W+QRL+ CIG
Sbjct: 88  TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 620 AARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGS 679
           AARGLHYLHT   R IIHRDVK+ NILLDENFV K++DFG+SK G  ++ TH+   VKG+
Sbjct: 148 AARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 680 FGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS 739
            GY+DPEYF + +LTEKSDVYSFGVVLFEV+CAR+ I  +LP++ +NLA+WA++      
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 740 LKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEA 794
           L+ I+DP+L     PESL KFG+ A KCL    ++RP+MG+VLW LEY L+L E+
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score =  330 bits (847), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 166/295 (56%), Positives = 210/295 (71%), Gaps = 5/295 (1%)
Query: 502 RFTLAEIRVATNNFDESLMXXXXXXXXXXXXXXXDCTLAAIKRANPQSEQGLAEFETEIE 561
           R  L ++  ATNNFD   +               D    A+KR  P+S QG+ EFETEIE
Sbjct: 28  RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 562 MLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLP--PLTWKQRLDACIG 619
            LS  RH HLVSLIGFCDE+NEMIL+Y+YM NG L+ HL+GSDLP   ++W+QRL+ CIG
Sbjct: 88  TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 620 AARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGS 679
           AARGLHYLHT   R IIHRDVK+ NILLDENFV K++DFG+SK G  +  TH+   VKG+
Sbjct: 148 AARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 680 FGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS 739
            GY+DPEYF + +LTEKSDVYSFGVVLFEV+CAR+ I  +LP++ +NLA+WA++      
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 740 LKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEA 794
           L+ I+DP+L     PESL KFG+ A KCL    ++RP+MG+VLW LEY L+L E+
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  199 bits (507), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 113/291 (38%), Positives = 164/291 (56%), Gaps = 6/291 (2%)
Query: 501 KRFTLAEIRVATNNFDESLMXXXXXXXXXXXXXXXDCTLAAIKRANPQSEQG-LAEFETE 559
           KRF+L E++VA++NF    +               D TL A+KR   +  QG   +F+TE
Sbjct: 26  KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 560 IEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLF--GSDLPPLTWKQRLDAC 617
           +EM+S   HR+L+ L GFC    E +LVY YMANG++ S L       PPL W +R    
Sbjct: 86  VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           +G+ARGL YLH   +  IIHRDVK  NILLDE F A + DFGL+K     +  HV  AV+
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDXHVXXAVR 204
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPT--LPKDQINLADWAMKWQ 735
           G+ G++ PEY    + +EK+DV+ +GV+L E++  +   +       D + L DW     
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 264
Query: 736 KQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
           K++ L++++D  L+GNY  E +E+  ++A  C       RP M EV+  LE
Sbjct: 265 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  197 bits (500), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 6/291 (2%)
Query: 501 KRFTLAEIRVATNNFDESLMXXXXXXXXXXXXXXXDCTLAAIKRANPQSEQG-LAEFETE 559
           KRF+L E++VA++NF    +               D  L A+KR   +  QG   +F+TE
Sbjct: 18  KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 560 IEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLF--GSDLPPLTWKQRLDAC 617
           +EM+S   HR+L+ L GFC    E +LVY YMANG++ S L       PPL W +R    
Sbjct: 78  VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           +G+ARGL YLH   +  IIHRDVK  NILLDE F A + DFGL+K     +  HV  AV+
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDXHVXXAVR 196
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPT--LPKDQINLADWAMKWQ 735
           G  G++ PEY    + +EK+DV+ +GV+L E++  +   +       D + L DW     
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256
Query: 736 KQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
           K++ L++++D  L+GNY  E +E+  ++A  C       RP M EV+  LE
Sbjct: 257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  148 bits (373), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 157/294 (53%), Gaps = 16/294 (5%)
Query: 503 FTLAEIRVATNNFDESLMXXXXXXXX-----XXXXXXXDCTLAAIKR----ANPQSEQGL 553
           F+  E++  TNNFDE  +                    + T  A+K+     +  +E+  
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 554 AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSD-LPPLTWKQ 612
            +F+ EI++++K +H +LV L+GF  + +++ LVY YM NG+L   L   D  PPL+W  
Sbjct: 75  QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
           R     GAA G+++LH   E   IHRD+K+ NILLDE F AK+SDFGL++       T +
Sbjct: 135 RCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
            + + G+  Y+ PE   R ++T KSD+YSFGVVL E++     ++    + Q+ L     
Sbjct: 192 XSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEH-REPQLLLDIKEE 249
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
              ++++++  ID  +  +    S+E    +A +CL ++   RP + +V   L+
Sbjct: 250 IEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  147 bits (372), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 156/294 (53%), Gaps = 16/294 (5%)
Query: 503 FTLAEIRVATNNFDESLMXXXXXXXX-----XXXXXXXDCTLAAIKR----ANPQSEQGL 553
           F+  E++  TNNFDE  +                    + T  A+K+     +  +E+  
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 554 AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSD-LPPLTWKQ 612
            +F+ EI++++K +H +LV L+GF  + +++ LVY YM NG+L   L   D  PPL+W  
Sbjct: 75  QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
           R     GAA G+++LH   E   IHRD+K+ NILLDE F AK+SDFGL++       T +
Sbjct: 135 RCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
              + G+  Y+ PE   R ++T KSD+YSFGVVL E++     ++    + Q+ L     
Sbjct: 192 XXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEH-REPQLLLDIKEE 249
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
              ++++++  ID  +  +    S+E    +A +CL ++   RP + +V   L+
Sbjct: 250 IEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score =  145 bits (366), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 155/294 (52%), Gaps = 16/294 (5%)
Query: 503 FTLAEIRVATNNFDESLMXXXXXXXX-----XXXXXXXDCTLAAIKR----ANPQSEQGL 553
           F+  E++  TNNFDE  +                    + T  A+K+     +  +E+  
Sbjct: 9   FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 554 AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSD-LPPLTWKQ 612
            +F+ EI++++K +H +LV L+GF  + +++ LVY YM NG+L   L   D  PPL+W  
Sbjct: 69  QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
           R     GAA G+++LH   E   IHRD+K+ NILLDE F AK+SDFGL++         +
Sbjct: 129 RCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
              + G+  Y+ PE   R ++T KSD+YSFGVVL E++     ++    + Q+ L     
Sbjct: 186 XXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEH-REPQLLLDIKEE 243
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
              ++++++  ID  +  +    S+E    +A +CL ++   RP + +V   L+
Sbjct: 244 IEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score =  138 bits (347), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 152/294 (51%), Gaps = 16/294 (5%)
Query: 503 FTLAEIRVATNNFDESLMXXXXXXXX-----XXXXXXXDCTLAAIKR----ANPQSEQGL 553
           F+  E++  TNNFDE  +                    + T  A+K+     +  +E+  
Sbjct: 6   FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 554 AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSD-LPPLTWKQ 612
            +F+ EI++ +K +H +LV L+GF  + +++ LVY Y  NG+L   L   D  PPL+W  
Sbjct: 66  QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
           R     GAA G+++LH   E   IHRD+K+ NILLDE F AK+SDFGL++          
Sbjct: 126 RCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
            + + G+  Y  PE   R ++T KSD+YSFGVVL E++     ++    + Q+ L     
Sbjct: 183 XSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEH-REPQLLLDIKEE 240
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
              ++++++  ID     +    S+E    +A +CL ++   RP + +V   L+
Sbjct: 241 IEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score =  103 bits (256), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 142/291 (48%), Gaps = 34/291 (11%)
Query: 541 AIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           AIK+   +SE+    F  E+  LS++ H ++V L G C   N + LV EY   G+L + L
Sbjct: 36  AIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC--LNPVCLVMEYAEGGSLYNVL 91
Query: 601 FGSD-LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN-FVAKMSDF 658
            G++ LP  T    +  C+  ++G+ YLH+   + +IHRD+K  N+LL     V K+ DF
Sbjct: 92  HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDF 151
Query: 659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINP 718
           G   T   ++ TH+ T  KGS  ++ PE F     +EK DV+S+G++L+EV+  R     
Sbjct: 152 G---TACDIQ-THM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK---- 202
Query: 719 TLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTM 778
             P D+I    + + W      +    P L  N  P+ +E    +  +C   +   RP+M
Sbjct: 203 --PFDEIGGPAFRIMWAVHNGTR----PPLIKNL-PKPIES---LMTRCWSKDPSQRPSM 252
Query: 779 GEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEFAEREAEDGQDAPTTD 829
            E++  + ++++    +    D    +    +L        EDG+  P  D
Sbjct: 253 EEIVKIMTHLMR----YFPGADEPLQYPCQHSLP-----PGEDGRVEPYVD 294

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score =  103 bits (256), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 34/292 (11%)
Query: 540 AAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSH 599
            AIK+   +SE+    F  E+  LS++ H ++V L G C   N + LV EY   G+L + 
Sbjct: 34  VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC--LNPVCLVMEYAEGGSLYNV 89
Query: 600 LFGSD-LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN-FVAKMSD 657
           L G++ LP  T    +  C+  ++G+ YLH+   + +IHRD+K  N+LL     V K+ D
Sbjct: 90  LHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 149
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FG   T   ++ TH+ T  KGS  ++ PE F     +EK DV+S+G++L+EV+  R    
Sbjct: 150 FG---TACDIQ-THM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK--- 201
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
              P D+I    + + W      +    P L  N  P+ +E    +  +C   +   RP+
Sbjct: 202 ---PFDEIGGPAFRIMWAVHNGTR----PPLIKNL-PKPIES---LMTRCWSKDPSQRPS 250
Query: 778 MGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEFAEREAEDGQDAPTTD 829
           M E++  + ++++    +    D    +    +L        EDG+  P  D
Sbjct: 251 MEEIVKIMTHLMR----YFPGADEPLQYPCQHSLP-----PGEDGRVEPYVD 293

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score =  103 bits (256), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  L A+K     S+    +F  E E+L+ L+H H+V   G C E + +I+V+EYM +G 
Sbjct: 42  DKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGD 101
Query: 596 L----RSH-----LFGSDLPP--LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTN 644
           L    R+H     L     PP  LT  Q L      A G+ YL   A +  +HRD+ T N
Sbjct: 102 LNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRN 158
Query: 645 ILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGV 704
            L+ EN + K+ DFG+S+   S ++  V         ++ PE    ++ T +SDV+S GV
Sbjct: 159 CLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGV 218
Query: 705 VLFEV 709
           VL+E+
Sbjct: 219 VLWEI 223

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score =  100 bits (249), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 96/187 (51%), Gaps = 16/187 (8%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  L A+K     SE    +F+ E E+L+ L+H+H+V   G C E   +++V+EYM +G 
Sbjct: 70  DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 129
Query: 596 L----RSH-------LFGSDLPP--LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
           L    RSH         G D+ P  L   Q L      A G+ YL   A    +HRD+ T
Sbjct: 130 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLAT 186
Query: 643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSF 702
            N L+ +  V K+ DFG+S+   S ++  V         ++ PE    ++ T +SDV+SF
Sbjct: 187 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSF 246
Query: 703 GVVLFEV 709
           GVVL+E+
Sbjct: 247 GVVLWEI 253

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score =  100 bits (248), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 96/187 (51%), Gaps = 16/187 (8%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  L A+K     SE    +F+ E E+L+ L+H+H+V   G C E   +++V+EYM +G 
Sbjct: 41  DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 100
Query: 596 L----RSH-------LFGSDLPP--LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
           L    RSH         G D+ P  L   Q L      A G+ YL   A    +HRD+ T
Sbjct: 101 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLAT 157
Query: 643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSF 702
            N L+ +  V K+ DFG+S+   S ++  V         ++ PE    ++ T +SDV+SF
Sbjct: 158 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSF 217
Query: 703 GVVLFEV 709
           GVVL+E+
Sbjct: 218 GVVLWEI 224

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score =  100 bits (248), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 96/187 (51%), Gaps = 16/187 (8%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  L A+K     SE    +F+ E E+L+ L+H+H+V   G C E   +++V+EYM +G 
Sbjct: 47  DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 106
Query: 596 L----RSH-------LFGSDLPP--LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
           L    RSH         G D+ P  L   Q L      A G+ YL   A    +HRD+ T
Sbjct: 107 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLAT 163
Query: 643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSF 702
            N L+ +  V K+ DFG+S+   S ++  V         ++ PE    ++ T +SDV+SF
Sbjct: 164 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSF 223
Query: 703 GVVLFEV 709
           GVVL+E+
Sbjct: 224 GVVLWEI 230

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 109/203 (53%), Gaps = 18/203 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T+A     +  +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G L
Sbjct: 69  TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNL 128
Query: 597 RSHLFGSDLP--------------PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
           R +L     P               +T+K  +      ARG+ YL   A +  IHRD+  
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSF 702
            N+L+ EN V K++DFGL++   ++++   +T  +    ++ PE  + +  T +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 703 GVVLFEVVCARAVINPTLPKDQI 725
           GV+++E+        P +P +++
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEEL 268

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 23/247 (9%)
Query: 540 AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYMANGTLR 597
            A+K  N  ++ G +++F TE  ++    H +++SL+G C   +   ++V  YM +G LR
Sbjct: 80  CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 139
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +      P T K  +   +  A+G+ YL   A +  +HRD+   N +LDE F  K++D
Sbjct: 140 NFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 195
Query: 658 FGLSKTGPSMEH--THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           FGL++     E+   H  T  K    ++  E    Q+ T KSDV+SFGV+L+E++   A 
Sbjct: 196 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                P   +N  D  +   + R L       L+  Y P+ L    E+  KC   + + R
Sbjct: 256 -----PYPDVNTFDITVYLLQGRRL-------LQPEYCPDPLY---EVMLKCWHPKAEMR 300
Query: 776 PTMGEVL 782
           P+  E++
Sbjct: 301 PSFSELV 307

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 109/203 (53%), Gaps = 18/203 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T+A     +  +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G L
Sbjct: 69  TVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 597 RSHLFGSDLP--------------PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
           R +L     P               +T+K  +      ARG+ YL   A +  IHRD+  
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSF 702
            N+L+ EN V K++DFGL++   ++++   +T  +    ++ PE  + +  T +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 703 GVVLFEVVCARAVINPTLPKDQI 725
           GV+++E+        P +P +++
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEEL 268

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 23/247 (9%)
Query: 540 AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYMANGTLR 597
            A+K  N  ++ G +++F TE  ++    H +++SL+G C   +   ++V  YM +G LR
Sbjct: 79  CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 138
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +      P T K  +   +  A+G+ YL   A +  +HRD+   N +LDE F  K++D
Sbjct: 139 NFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 194
Query: 658 FGLSKTGPSMEH--THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           FGL++     E+   H  T  K    ++  E    Q+ T KSDV+SFGV+L+E++   A 
Sbjct: 195 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                P   +N  D  +   + R L       L+  Y P+ L    E+  KC   + + R
Sbjct: 255 -----PYPDVNTFDITVYLLQGRRL-------LQPEYCPDPLY---EVMLKCWHPKAEMR 299
Query: 776 PTMGEVL 782
           P+  E++
Sbjct: 300 PSFSELV 306

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 23/247 (9%)
Query: 540 AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYMANGTLR 597
            A+K  N  ++ G +++F TE  ++    H +++SL+G C   +   ++V  YM +G LR
Sbjct: 53  CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 112
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +      P T K  +   +  A+G+ YL   A +  +HRD+   N +LDE F  K++D
Sbjct: 113 NFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 168
Query: 658 FGLSKTGPSMEH--THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           FGL++     E+   H  T  K    ++  E    Q+ T KSDV+SFGV+L+E++   A 
Sbjct: 169 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                P   +N  D  +   + R L       L+  Y P+ L    E+  KC   + + R
Sbjct: 229 -----PYPDVNTFDITVYLLQGRRL-------LQPEYCPDPLY---EVMLKCWHPKAEMR 273
Query: 776 PTMGEVL 782
           P+  E++
Sbjct: 274 PSFSELV 280

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 23/247 (9%)
Query: 540 AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYMANGTLR 597
            A+K  N  ++ G +++F TE  ++    H +++SL+G C   +   ++V  YM +G LR
Sbjct: 58  CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 117
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +      P T K  +   +  A+G+ YL   A +  +HRD+   N +LDE F  K++D
Sbjct: 118 NFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 173
Query: 658 FGLSKTGPSMEH--THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           FGL++     E+   H  T  K    ++  E    Q+ T KSDV+SFGV+L+E++   A 
Sbjct: 174 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                P   +N  D  +   + R L       L+  Y P+ L    E+  KC   + + R
Sbjct: 234 -----PYPDVNTFDITVYLLQGRRL-------LQPEYCPDPLY---EVMLKCWHPKAEMR 278
Query: 776 PTMGEVL 782
           P+  E++
Sbjct: 279 PSFSELV 285

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 109/203 (53%), Gaps = 18/203 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T+A     +  +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G L
Sbjct: 61  TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 120
Query: 597 RSHLFGSDLP--------------PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
           R +L     P               +T+K  +      ARG+ YL   A +  IHRD+  
Sbjct: 121 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 177
Query: 643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSF 702
            N+L+ EN V K++DFGL++   ++++   +T  +    ++ PE  + +  T +SDV+SF
Sbjct: 178 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 237
Query: 703 GVVLFEVVCARAVINPTLPKDQI 725
           GV+++E+        P +P +++
Sbjct: 238 GVLMWEIFTLGGSPYPGIPVEEL 260

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 23/247 (9%)
Query: 540 AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYMANGTLR 597
            A+K  N  ++ G +++F TE  ++    H +++SL+G C   +   ++V  YM +G LR
Sbjct: 59  CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 118
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +      P T K  +   +  A+G+ YL   A +  +HRD+   N +LDE F  K++D
Sbjct: 119 NFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 174
Query: 658 FGLSKTGPSMEH--THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           FGL++     E+   H  T  K    ++  E    Q+ T KSDV+SFGV+L+E++   A 
Sbjct: 175 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                P   +N  D  +   + R L       L+  Y P+ L    E+  KC   + + R
Sbjct: 235 -----PYPDVNTFDITVYLLQGRRL-------LQPEYCPDPLY---EVMLKCWHPKAEMR 279
Query: 776 PTMGEVL 782
           P+  E++
Sbjct: 280 PSFSELV 286

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 23/247 (9%)
Query: 540 AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYMANGTLR 597
            A+K  N  ++ G +++F TE  ++    H +++SL+G C   +   ++V  YM +G LR
Sbjct: 61  CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 120
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +      P T K  +   +  A+G+ YL   A +  +HRD+   N +LDE F  K++D
Sbjct: 121 NFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 658 FGLSKTGPSMEH--THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           FGL++     E+   H  T  K    ++  E    Q+ T KSDV+SFGV+L+E++   A 
Sbjct: 177 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                P   +N  D  +   + R L       L+  Y P+ L    E+  KC   + + R
Sbjct: 237 -----PYPDVNTFDITVYLLQGRRL-------LQPEYCPDPLY---EVMLKCWHPKAEMR 281
Query: 776 PTMGEVL 782
           P+  E++
Sbjct: 282 PSFSELV 288

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 23/247 (9%)
Query: 540 AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYMANGTLR 597
            A+K  N  ++ G +++F TE  ++    H +++SL+G C   +   ++V  YM +G LR
Sbjct: 60  CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 119
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +      P T K  +   +  A+G+ YL   A +  +HRD+   N +LDE F  K++D
Sbjct: 120 NFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 175
Query: 658 FGLSKTGPSMEH--THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           FGL++     E+   H  T  K    ++  E    Q+ T KSDV+SFGV+L+E++   A 
Sbjct: 176 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                P   +N  D  +   + R L       L+  Y P+ L    E+  KC   + + R
Sbjct: 236 -----PYPDVNTFDITVYLLQGRRL-------LQPEYCPDPLY---EVMLKCWHPKAEMR 280
Query: 776 PTMGEVL 782
           P+  E++
Sbjct: 281 PSFSELV 287

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 23/247 (9%)
Query: 540 AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYMANGTLR 597
            A+K  N  ++ G +++F TE  ++    H +++SL+G C   +   ++V  YM +G LR
Sbjct: 61  CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 120
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +      P T K  +   +  A+G+ YL   A +  +HRD+   N +LDE F  K++D
Sbjct: 121 NFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 658 FGLSKTGPSMEH--THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           FGL++     E+   H  T  K    ++  E    Q+ T KSDV+SFGV+L+E++   A 
Sbjct: 177 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                P   +N  D  +   + R L       L+  Y P+ L    E+  KC   + + R
Sbjct: 237 -----PYPDVNTFDITVYLLQGRRL-------LQPEYCPDPLY---EVMLKCWHPKAEMR 281
Query: 776 PTMGEVL 782
           P+  E++
Sbjct: 282 PSFSELV 288

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 109/203 (53%), Gaps = 18/203 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T+A     +  +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G L
Sbjct: 58  TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 117
Query: 597 RSHLFGSDLP--------------PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
           R +L     P               +T+K  +      ARG+ YL   A +  IHRD+  
Sbjct: 118 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 174
Query: 643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSF 702
            N+L+ EN V K++DFGL++   ++++   +T  +    ++ PE  + +  T +SDV+SF
Sbjct: 175 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 234
Query: 703 GVVLFEVVCARAVINPTLPKDQI 725
           GV+++E+        P +P +++
Sbjct: 235 GVLMWEIFTLGGSPYPGIPVEEL 257

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 109/203 (53%), Gaps = 18/203 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T+A     +  +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G L
Sbjct: 56  TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 115
Query: 597 RSHLFGSDLP--------------PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
           R +L     P               +T+K  +      ARG+ YL   A +  IHRD+  
Sbjct: 116 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTA 172
Query: 643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSF 702
            N+L+ EN V K++DFGL++   ++++   +T  +    ++ PE  + +  T +SDV+SF
Sbjct: 173 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 232
Query: 703 GVVLFEVVCARAVINPTLPKDQI 725
           GV+++E+        P +P +++
Sbjct: 233 GVLMWEIFTLGGSPYPGIPVEEL 255

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 23/247 (9%)
Query: 540 AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYMANGTLR 597
            A+K  N  ++ G +++F TE  ++    H +++SL+G C   +   ++V  YM +G LR
Sbjct: 56  CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 115
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +      P T K  +   +  A+G+ YL   A +  +HRD+   N +LDE F  K++D
Sbjct: 116 NFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 171
Query: 658 FGLSKTGPSMEH--THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           FGL++     E+   H  T  K    ++  E    Q+ T KSDV+SFGV+L+E++   A 
Sbjct: 172 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                P   +N  D  +   + R L       L+  Y P+ L    E+  KC   + + R
Sbjct: 232 -----PYPDVNTFDITVYLLQGRRL-------LQPEYCPDPLY---EVMLKCWHPKAEMR 276
Query: 776 PTMGEVL 782
           P+  E++
Sbjct: 277 PSFSELV 283

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 34/261 (13%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  +  +    P  +Q L  F+ E+ +L K RH +++  +G+   + ++ +V ++    +
Sbjct: 36  DVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSS 93
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           L  HL  S+      K+ +D     ARG+ YLH    + IIHRD+K+ NI L E+   K+
Sbjct: 94  LYHHLHASETK-FEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKI 149
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCA 712
            DFGL+        +H    + GS  ++ PE    Q     + +SDVY+FG+VL+E++  
Sbjct: 150 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 209
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPE-------SLEKFGEIAE 765
           +      LP   IN  D             II+   +G+ SP+         ++   +  
Sbjct: 210 Q------LPYSNINNRD------------QIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA 251
Query: 766 KCLDDEGKNRPTMGEVLWHLE 786
           +CL  +   RP+   +L  +E
Sbjct: 252 ECLKKKRDERPSFPRILAEIE 272

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 109/203 (53%), Gaps = 18/203 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T+A     +  +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G L
Sbjct: 69  TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 597 RSHLFGSDLP--------------PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
           R +L     P               +T+K  +      ARG+ YL   A +  IHRD+  
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSF 702
            N+L+ EN V K++DFGL++   ++++   +T  +    ++ PE  + +  T +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 703 GVVLFEVVCARAVINPTLPKDQI 725
           GV+++E+        P +P +++
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEEL 268

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 109/203 (53%), Gaps = 18/203 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T+A     +  +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G L
Sbjct: 115 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 174
Query: 597 RSHLFGSDLP--------------PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
           R +L     P               +T+K  +      ARG+ YL   A +  IHRD+  
Sbjct: 175 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 231
Query: 643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSF 702
            N+L+ EN V K++DFGL++   ++++   +T  +    ++ PE  + +  T +SDV+SF
Sbjct: 232 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 291
Query: 703 GVVLFEVVCARAVINPTLPKDQI 725
           GV+++E+        P +P +++
Sbjct: 292 GVLMWEIFTLGGSPYPGIPVEEL 314

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T+A     +  +E+ L++  +E+EM+  + +H++++ L+G C +   + ++ EY + G L
Sbjct: 69  TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNL 128
Query: 597 RSHLFGSDLP--------------PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
           R +L     P               +T+K  +      ARG+ YL   A +  IHRD+  
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSF 702
            N+L+ EN V K++DFGL++   ++++   +T  +    ++ PE  + +  T +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 703 GVVLFEVVCARAVINPTLPKDQI 725
           GV+++E+        P +P +++
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEEL 268

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 34/261 (13%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  +  +    P  +Q L  F+ E+ +L K RH +++  +G+   + ++ +V ++    +
Sbjct: 48  DVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSS 105
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           L  HL  S+      K+ +D     ARG+ YLH    + IIHRD+K+ NI L E+   K+
Sbjct: 106 LYHHLHASETK-FEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKI 161
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCA 712
            DFGL+        +H    + GS  ++ PE    Q     + +SDVY+FG+VL+E++  
Sbjct: 162 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 221
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPE-------SLEKFGEIAE 765
           +      LP   IN  D             II+   +G+ SP+         ++   +  
Sbjct: 222 Q------LPYSNINNRD------------QIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA 263
Query: 766 KCLDDEGKNRPTMGEVLWHLE 786
           +CL  +   RP+   +L  +E
Sbjct: 264 ECLKKKRDERPSFPRILAEIE 284

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T+A     +  +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G L
Sbjct: 69  TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 597 RSHLFGSDLP--------------PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
           R +L     P               +T+K  +      ARG+ YL   A +  IHRD+  
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSF 702
            N+L+ EN V K++DFGL++   +++    +T  +    ++ PE  + +  T +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 703 GVVLFEVVCARAVINPTLPKDQI 725
           GV+++E+        P +P +++
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEEL 268

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 109/203 (53%), Gaps = 18/203 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T+A     +  +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G L
Sbjct: 69  TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 597 RSHLFGSDLP--------------PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
           R +L     P               +T+K  +      ARG+ YL   A +  IHRD+  
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSF 702
            N+L+ EN V +++DFGL++   ++++   +T  +    ++ PE  + +  T +SDV+SF
Sbjct: 186 RNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 703 GVVLFEVVCARAVINPTLPKDQI 725
           GV+++E+        P +P +++
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEEL 268

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T+A     +  +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G L
Sbjct: 69  TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 597 RSHLFGSDLP--------------PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
           R +L     P               +T+K  +      ARG+ YL   A +  IHRD+  
Sbjct: 129 REYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSF 702
            N+L+ EN V K++DFGL++   +++    +T  +    ++ PE  + +  T +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 703 GVVLFEVVCARAVINPTLPKDQI 725
           GV+++E+        P +P +++
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEEL 268

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 88/156 (56%), Gaps = 4/156 (2%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDL-PPLTWKQR 613
           EF  E+ ++ +LRH ++V  +G   +   + +V EY++ G+L   L  S     L  ++R
Sbjct: 80  EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRR 139
Query: 614 LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS 673
           L      A+G++YLH      I+HRD+K+ N+L+D+ +  K+ DFGLS+   S      S
Sbjct: 140 LSMAYDVAKGMNYLHN-RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASX--FLXS 196
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
               G+  ++ PE    +   EKSDVYSFGV+L+E+
Sbjct: 197 KXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 121/247 (48%), Gaps = 23/247 (9%)
Query: 540 AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYMANGTLR 597
            A+K  N  ++ G +++F TE  ++    H +++SL+G C   +   ++V  YM +G LR
Sbjct: 60  CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 119
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +      P T K  +   +  A+G+ YL   A +  +HRD+   N +LDE F  K++D
Sbjct: 120 NFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 175
Query: 658 FGLSKTGPSMEH--THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           FGL++     E    H  T  K    ++  E    Q+ T KSDV+SFGV+L+E++   A 
Sbjct: 176 FGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                P   +N  D  +   + R L       L+  Y P+ L    E+  KC   + + R
Sbjct: 236 -----PYPDVNTFDITVYLLQGRRL-------LQPEYCPDPLY---EVMLKCWHPKAEMR 280
Query: 776 PTMGEVL 782
           P+  E++
Sbjct: 281 PSFSELV 287

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 90/156 (57%), Gaps = 4/156 (2%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDL-PPLTWKQR 613
           EF  E+ ++ +LRH ++V  +G   +   + +V EY++ G+L   L  S     L  ++R
Sbjct: 80  EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRR 139
Query: 614 LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS 673
           L      A+G++YLH      I+HR++K+ N+L+D+ +  K+ DFGLS+   S   +  S
Sbjct: 140 LSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS 198
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
            A  G+  ++ PE    +   EKSDVYSFGV+L+E+
Sbjct: 199 AA--GTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 92/172 (53%), Gaps = 10/172 (5%)
Query: 540 AAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
            AIK  R    SE+   +F  E E++ KL H  LV L G C EQ  + LV+E+M +G L 
Sbjct: 34  VAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 90
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
            +L  +       +  L  C+    G+ YL    E  +IHRD+   N L+ EN V K+SD
Sbjct: 91  DYL-RTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSD 146
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           FG+++     ++T  ST  K    +  PE F   + + KSDV+SFGV+++EV
Sbjct: 147 FGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 34/261 (13%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  +  +    P  +Q L  F+ E+ +L K RH +++  +G+     ++ +V ++    +
Sbjct: 48  DVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYSTAP-QLAIVTQWCEGSS 105
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           L  HL  S+      K+ +D     ARG+ YLH    + IIHRD+K+ NI L E+   K+
Sbjct: 106 LYHHLHASETK-FEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKI 161
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCA 712
            DFGL+        +H    + GS  ++ PE    Q     + +SDVY+FG+VL+E++  
Sbjct: 162 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 221
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPE-------SLEKFGEIAE 765
           +      LP   IN  D             II+   +G+ SP+         ++   +  
Sbjct: 222 Q------LPYSNINNRD------------QIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA 263
Query: 766 KCLDDEGKNRPTMGEVLWHLE 786
           +CL  +   RP+   +L  +E
Sbjct: 264 ECLKKKRDERPSFPRILAEIE 284

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 93.2 bits (230), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 17/188 (9%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  L A+K     +     +F+ E E+L+ L+H H+V   G C + + +I+V+EYM +G 
Sbjct: 44  DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGD 103
Query: 596 L----RSH----LFGSDLPP------LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVK 641
           L    R+H    +   D  P      L   Q L      A G+ YL   A +  +HRD+ 
Sbjct: 104 LNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLA 160
Query: 642 TTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYS 701
           T N L+  N + K+ DFG+S+   S ++  V         ++ PE    ++ T +SDV+S
Sbjct: 161 TRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS 220
Query: 702 FGVVLFEV 709
           FGV+L+E+
Sbjct: 221 FGVILWEI 228

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 93.2 bits (230), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 23/247 (9%)
Query: 540 AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYMANGTLR 597
            A+K  N  ++ G +++F TE  ++    H +++SL+G C   +   ++V  YM +G LR
Sbjct: 120 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 179
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +      P T K  +   +  A+G+ +L   A +  +HRD+   N +LDE F  K++D
Sbjct: 180 NFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 235
Query: 658 FGLSKT--GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           FGL++       +  H  T  K    ++  E    Q+ T KSDV+SFGV+L+E++   A 
Sbjct: 236 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                P   +N  D  +   + R L       L+  Y P+ L    E+  KC   + + R
Sbjct: 296 -----PYPDVNTFDITVYLLQGRRL-------LQPEYCPDPLY---EVMLKCWHPKAEMR 340
Query: 776 PTMGEVL 782
           P+  E++
Sbjct: 341 PSFSELV 347

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 91/172 (52%), Gaps = 10/172 (5%)
Query: 540 AAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
            AIK  R    SE+   E   E E++ KL H  LV L G C EQ  + LV+E+M +G L 
Sbjct: 32  VAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 88
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
            +L  +       +  L  C+    G+ YL    E  +IHRD+   N L+ EN V K+SD
Sbjct: 89  DYL-RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSD 144
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           FG+++     ++T  ST  K    +  PE F   + + KSDV+SFGV+++EV
Sbjct: 145 FGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 195

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 23/247 (9%)
Query: 540 AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYMANGTLR 597
            A+K  N  ++ G +++F TE  ++    H +++SL+G C   +   ++V  YM +G LR
Sbjct: 62  CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 121
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +      P T K  +   +  A+G+ +L   A +  +HRD+   N +LDE F  K++D
Sbjct: 122 NFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 658 FGLSK--TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           FGL++       +  H  T  K    ++  E    Q+ T KSDV+SFGV+L+E++   A 
Sbjct: 178 FGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                P   +N  D  +   + R L       L+  Y P+ L    E+  KC   + + R
Sbjct: 238 -----PYPDVNTFDITVYLLQGRRL-------LQPEYCPDPLY---EVMLKCWHPKAEMR 282
Query: 776 PTMGEVL 782
           P+  E++
Sbjct: 283 PSFSELV 289

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 23/247 (9%)
Query: 540 AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYMANGTLR 597
            A+K  N  ++ G +++F TE  ++    H +++SL+G C   +   ++V  YM +G LR
Sbjct: 62  CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 121
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +      P T K  +   +  A+G+ +L   A +  +HRD+   N +LDE F  K++D
Sbjct: 122 NFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 658 FGLSKT--GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           FGL++       +  H  T  K    ++  E    Q+ T KSDV+SFGV+L+E++   A 
Sbjct: 178 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                P   +N  D  +   + R L       L+  Y P+ L    E+  KC   + + R
Sbjct: 238 -----PYPDVNTFDITVYLLQGRRL-------LQPEYCPDPLY---EVMLKCWHPKAEMR 282
Query: 776 PTMGEVL 782
           P+  E++
Sbjct: 283 PSFSELV 289

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 23/247 (9%)
Query: 540 AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYMANGTLR 597
            A+K  N  ++ G +++F TE  ++    H +++SL+G C   +   ++V  YM +G LR
Sbjct: 59  CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 118
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +      P T K  +   +  A+G+ +L   A +  +HRD+   N +LDE F  K++D
Sbjct: 119 NFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 174
Query: 658 FGLSKT--GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           FGL++       +  H  T  K    ++  E    Q+ T KSDV+SFGV+L+E++   A 
Sbjct: 175 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                P   +N  D  +   + R L       L+  Y P+ L    E+  KC   + + R
Sbjct: 235 -----PYPDVNTFDITVYLLQGRRL-------LQPEYCPDPLY---EVMLKCWHPKAEMR 279
Query: 776 PTMGEVL 782
           P+  E++
Sbjct: 280 PSFSELV 286

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 92/172 (53%), Gaps = 10/172 (5%)
Query: 540 AAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
            AIK  R    SE+   +F  E E++ KL H  LV L G C EQ  + LV+E+M +G L 
Sbjct: 37  VAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
            +L  +       +  L  C+    G+ YL    E  +IHRD+   N L+ EN V K+SD
Sbjct: 94  DYL-RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSD 149
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           FG+++     ++T  ST  K    +  PE F   + + KSDV+SFGV+++EV
Sbjct: 150 FGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 200

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 23/247 (9%)
Query: 540 AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYMANGTLR 597
            A+K  N  ++ G +++F TE  ++    H +++SL+G C   +   ++V  YM +G LR
Sbjct: 61  CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 120
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +      P T K  +   +  A+G+ +L   A +  +HRD+   N +LDE F  K++D
Sbjct: 121 NFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 658 FGLSKT--GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           FGL++       +  H  T  K    ++  E    Q+ T KSDV+SFGV+L+E++   A 
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                P   +N  D  +   + R L       L+  Y P+ L    E+  KC   + + R
Sbjct: 237 -----PYPDVNTFDITVYLLQGRRL-------LQPEYCPDPLY---EVMLKCWHPKAEMR 281
Query: 776 PTMGEVL 782
           P+  E++
Sbjct: 282 PSFSELV 288

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 92/172 (53%), Gaps = 10/172 (5%)
Query: 540 AAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
            AIK  R    SE+   +F  E E++ KL H  LV L G C EQ  + LV+E+M +G L 
Sbjct: 34  VAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 90
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
            +L  +       +  L  C+    G+ YL    E  +IHRD+   N L+ EN V K+SD
Sbjct: 91  DYL-RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSD 146
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           FG+++     ++T  ST  K    +  PE F   + + KSDV+SFGV+++EV
Sbjct: 147 FGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 92.8 bits (229), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 104/192 (54%), Gaps = 18/192 (9%)
Query: 549 SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP 607
           +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G LR +L   + P 
Sbjct: 73  TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPG 132
Query: 608 LTW--------------KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA 653
           L +              K  +      ARG+ YL   A +  IHRD+   N+L+ E+ V 
Sbjct: 133 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVM 189
Query: 654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           K++DFGL++    +++   +T  +    ++ PE  + +  T +SDV+SFGV+L+E+    
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 714 AVINPTLPKDQI 725
               P +P +++
Sbjct: 250 GSPYPGVPVEEL 261

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 92.8 bits (229), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 23/247 (9%)
Query: 540 AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYMANGTLR 597
            A+K  N  ++ G +++F TE  ++    H +++SL+G C   +   ++V  YM +G LR
Sbjct: 66  CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 125
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +      P T K  +   +  A+G+ +L   A +  +HRD+   N +LDE F  K++D
Sbjct: 126 NFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 181
Query: 658 FGLSKT--GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           FGL++       +  H  T  K    ++  E    Q+ T KSDV+SFGV+L+E++   A 
Sbjct: 182 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                P   +N  D  +   + R L       L+  Y P+ L    E+  KC   + + R
Sbjct: 242 -----PYPDVNTFDITVYLLQGRRL-------LQPEYCPDPLY---EVMLKCWHPKAEMR 286
Query: 776 PTMGEVL 782
           P+  E++
Sbjct: 287 PSFSELV 293

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 92.8 bits (229), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 23/247 (9%)
Query: 540 AAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYEYMANGTLR 597
            A+K  N  ++ G +++F TE  ++    H +++SL+G C   +   ++V  YM +G LR
Sbjct: 61  CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 120
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +      P T K  +   +  A+G+ +L   A +  +HRD+   N +LDE F  K++D
Sbjct: 121 NFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 658 FGLSKT--GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           FGL++       +  H  T  K    ++  E    Q+ T KSDV+SFGV+L+E++   A 
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                P   +N  D  +   + R L       L+  Y P+ L    E+  KC   + + R
Sbjct: 237 -----PYPDVNTFDITVYLLQGRRL-------LQPEYCPDPLY---EVMLKCWHPKAEMR 281
Query: 776 PTMGEVL 782
           P+  E++
Sbjct: 282 PSFSELV 288

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 92.4 bits (228), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T+A     +  +E+ L++  +E+EM+  + +H+++++L+G C +   + ++  Y + G L
Sbjct: 69  TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNL 128
Query: 597 RSHLFGSDLP--------------PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
           R +L     P               +T+K  +      ARG+ YL   A +  IHRD+  
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSF 702
            N+L+ EN V K++DFGL++   ++++   +T  +    ++ PE  + +  T +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 703 GVVLFEVVCARAVINPTLPKDQI 725
           GV+++E+        P +P +++
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEEL 268

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 5/155 (3%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +F  E E++ KL H  LV L G C EQ  + LV+E+M +G L  +L  +       +  L
Sbjct: 68  DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLL 126
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
             C+    G+ YL    E  +IHRD+   N L+ EN V K+SDFG+++     ++T  ST
Sbjct: 127 GMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-ST 182
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
             K    +  PE F   + + KSDV+SFGV+++EV
Sbjct: 183 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 217

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 103/192 (53%), Gaps = 18/192 (9%)
Query: 549 SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP 607
           +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G LR +L     P 
Sbjct: 114 TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 173
Query: 608 LTW--------------KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA 653
           L +              K  +      ARG+ YL   A +  IHRD+   N+L+ E+ V 
Sbjct: 174 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVM 230
Query: 654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           K++DFGL++    +++   +T  +    ++ PE  + +  T +SDV+SFGV+L+E+    
Sbjct: 231 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 290
Query: 714 AVINPTLPKDQI 725
               P +P +++
Sbjct: 291 GSPYPGVPVEEL 302

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T+A     +  +E+ L++  +E+EM+  + +H+++++L+G C +   + ++  Y + G L
Sbjct: 69  TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNL 128
Query: 597 RSHLFGSDLP--------------PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
           R +L     P               +T+K  +      ARG+ YL   A +  IHRD+  
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSF 702
            N+L+ EN V K++DFGL++   ++++   +T  +    ++ PE  + +  T +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 703 GVVLFEVVCARAVINPTLPKDQI 725
           GV+++E+        P +P +++
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEEL 268

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 103/192 (53%), Gaps = 18/192 (9%)
Query: 549 SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP 607
           +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G LR +L     P 
Sbjct: 65  TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 124
Query: 608 LTW--------------KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA 653
           L +              K  +      ARG+ YL   A +  IHRD+   N+L+ E+ V 
Sbjct: 125 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVM 181
Query: 654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           K++DFGL++    +++   +T  +    ++ PE  + +  T +SDV+SFGV+L+E+    
Sbjct: 182 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 241
Query: 714 AVINPTLPKDQI 725
               P +P +++
Sbjct: 242 GSPYPGVPVEEL 253

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 103/192 (53%), Gaps = 18/192 (9%)
Query: 549 SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP 607
           +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G LR +L     P 
Sbjct: 62  TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 121
Query: 608 LTW--------------KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA 653
           L +              K  +      ARG+ YL   A +  IHRD+   N+L+ E+ V 
Sbjct: 122 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVM 178
Query: 654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           K++DFGL++    +++   +T  +    ++ PE  + +  T +SDV+SFGV+L+E+    
Sbjct: 179 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 238
Query: 714 AVINPTLPKDQI 725
               P +P +++
Sbjct: 239 GSPYPGVPVEEL 250

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 103/192 (53%), Gaps = 18/192 (9%)
Query: 549 SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP 607
           +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G LR +L     P 
Sbjct: 66  TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 125
Query: 608 LTW--------------KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA 653
           L +              K  +      ARG+ YL   A +  IHRD+   N+L+ E+ V 
Sbjct: 126 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVM 182
Query: 654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           K++DFGL++    +++   +T  +    ++ PE  + +  T +SDV+SFGV+L+E+    
Sbjct: 183 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 242
Query: 714 AVINPTLPKDQI 725
               P +P +++
Sbjct: 243 GSPYPGVPVEEL 254

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 103/192 (53%), Gaps = 18/192 (9%)
Query: 549 SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP 607
           +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G LR +L     P 
Sbjct: 73  TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 608 LTW--------------KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA 653
           L +              K  +      ARG+ YL   A +  IHRD+   N+L+ E+ V 
Sbjct: 133 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVM 189
Query: 654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           K++DFGL++    +++   +T  +    ++ PE  + +  T +SDV+SFGV+L+E+    
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 714 AVINPTLPKDQI 725
               P +P +++
Sbjct: 250 GSPYPGVPVEEL 261

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 103/192 (53%), Gaps = 18/192 (9%)
Query: 549 SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP 607
           +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G LR +L     P 
Sbjct: 58  TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 117
Query: 608 LTW--------------KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA 653
           L +              K  +      ARG+ YL   A +  IHRD+   N+L+ E+ V 
Sbjct: 118 LEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVM 174
Query: 654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           K++DFGL++    +++   +T  +    ++ PE  + +  T +SDV+SFGV+L+E+    
Sbjct: 175 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 234
Query: 714 AVINPTLPKDQI 725
               P +P +++
Sbjct: 235 GSPYPGVPVEEL 246

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 103/192 (53%), Gaps = 18/192 (9%)
Query: 549 SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP 607
           +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G LR +L     P 
Sbjct: 73  TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 608 LTW--------------KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA 653
           L +              K  +      ARG+ YL   A +  IHRD+   N+L+ E+ V 
Sbjct: 133 LEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVM 189
Query: 654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           K++DFGL++    +++   +T  +    ++ PE  + +  T +SDV+SFGV+L+E+    
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 714 AVINPTLPKDQI 725
               P +P +++
Sbjct: 250 GSPYPGVPVEEL 261

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 97/180 (53%), Gaps = 23/180 (12%)
Query: 544 RANPQSE--QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLF 601
           R +P  +  Q +     E ++ + L+H ++++L G C ++  + LV E+   G L   L 
Sbjct: 39  RHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS 98
Query: 602 GSDLPP---LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE--------N 650
           G  +PP   + W  ++      ARG++YLH  A   IIHRD+K++NIL+ +        N
Sbjct: 99  GKRIPPDILVNWAVQI------ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSN 152
Query: 651 FVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
            + K++DFGL++      H     +  G++ ++ PE       ++ SDV+S+GV+L+E++
Sbjct: 153 KILKITDFGLAREW----HRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELL 208

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 91/172 (52%), Gaps = 10/172 (5%)
Query: 540 AAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
            AIK  R    SE+   +F  E E++ KL H  LV L G C EQ  + LV E+M +G L 
Sbjct: 35  VAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
            +L  +       +  L  C+    G+ YL    E  +IHRD+   N L+ EN V K+SD
Sbjct: 92  DYL-RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSD 147
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           FG+++     ++T  ST  K    +  PE F   + + KSDV+SFGV+++EV
Sbjct: 148 FGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 198

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 102/192 (53%), Gaps = 18/192 (9%)
Query: 549 SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP 607
           +E+ L++  +E+EM+  + +H+++++L+G C +   + ++ EY + G LR +L     P 
Sbjct: 73  TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 608 LTW--------------KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA 653
           L +              K  +      ARG+ YL   A +  IHRD+   N+L+ E+ V 
Sbjct: 133 LEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVM 189
Query: 654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           K++DFGL++    ++    +T  +    ++ PE  + +  T +SDV+SFGV+L+E+    
Sbjct: 190 KIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 714 AVINPTLPKDQI 725
               P +P +++
Sbjct: 250 GSPYPGVPVEEL 261

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 90.1 bits (222), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 26/195 (13%)
Query: 538 TLAAIKRANPQSEQGL-AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T+ A+K    ++   + A+F+ E  ++++  + ++V L+G C     M L++EYMA G L
Sbjct: 78  TMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL 137
Query: 597 RSHLFG-----------SDL-----------PPLTWKQRLDACIGAARGLHYLHTGAERG 634
              L             SDL           PPL+  ++L      A G+ YL   +ER 
Sbjct: 138 NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL---SERK 194
Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
            +HRD+ T N L+ EN V K++DFGLS+   S ++            ++ PE  +  + T
Sbjct: 195 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYT 254
Query: 695 EKSDVYSFGVVLFEV 709
            +SDV+++GVVL+E+
Sbjct: 255 TESDVWAYGVVLWEI 269

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 89.4 bits (220), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 108/240 (45%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM+ G+L 
Sbjct: 209 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLL 266
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 267 DFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 323
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T      K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 324 FGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   E + RPT
Sbjct: 383 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 427

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 108/240 (45%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM+ G+L 
Sbjct: 209 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLL 266
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 267 DFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 323
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T      K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 324 FGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   E + RPT
Sbjct: 383 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 427

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 21/241 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM+ G+L 
Sbjct: 292 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLL 349
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 350 DFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 406
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T      K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 407 FGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 465
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   E + RPT
Sbjct: 466 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 510
Query: 778 M 778
Sbjct: 511 F 511

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM+ G+L 
Sbjct: 36  TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLL 93
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 94  DFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 150
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T    A K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 151 FGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 209
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   E + RPT
Sbjct: 210 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 254

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 108/240 (45%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM+ G+L 
Sbjct: 209 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVGEYMSKGSLL 266
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 267 DFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 323
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T      K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 324 FGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   E + RPT
Sbjct: 383 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 427

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 108/240 (45%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM+ G+L 
Sbjct: 33  TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEP-IXIVTEYMSKGSLL 90
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 91  DFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 147
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E T    A K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 148 FGLARLIEDNEXTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 206
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   E + RPT
Sbjct: 207 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 251

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 108/240 (45%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM  G+L 
Sbjct: 40  TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLL 97
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 98  DFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 154
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T    A K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 155 FGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 213
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   E + RPT
Sbjct: 214 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 258

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM+ G+L 
Sbjct: 34  TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLL 91
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 92  DFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 148
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T    A K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 149 FGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 207
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   + + RPT
Sbjct: 208 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 252

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 86.7 bits (213), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM+ G+L 
Sbjct: 32  TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLL 89
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 90  DFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 146
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T    A K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 147 FGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 205
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   + + RPT
Sbjct: 206 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 250

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM+ G+L 
Sbjct: 43  TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLL 100
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 101 DFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T    A K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 158 FGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   + + RPT
Sbjct: 217 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 86.3 bits (212), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 118/256 (46%), Gaps = 24/256 (9%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  +  +K  +P  EQ  A F  E+ +L K RH +++  +G+  + N + +V ++    +
Sbjct: 60  DVAVKILKVVDPTPEQFQA-FRNEVAVLRKTRHVNILLFMGYMTKDN-LAIVTQWCEGSS 117
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           L  HL   +       Q +D     A+G+ YLH    + IIHRD+K+ NI L E    K+
Sbjct: 118 LYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKI 173
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCA 712
            DFGL+        +       GS  ++ PE    Q     + +SDVYS+G+VL+E++  
Sbjct: 174 GDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS--PESLEKFGEIAEKCLDD 770
                  LP   IN  D  + +   R   S   P L   Y   P+++++   +   C+  
Sbjct: 234 E------LPYSHINNRDQII-FMVGRGYAS---PDLSKLYKNCPKAMKR---LVADCVKK 280
Query: 771 EGKNRPTMGEVLWHLE 786
             + RP   ++L  +E
Sbjct: 281 VKEERPLFPQILSSIE 296

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 86.3 bits (212), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F  E  ++ +  H +++ L G   +   +++V EYM NG+L S L   D    
Sbjct: 57  TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQF 115
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSM 667
           T  Q +    G A G+ YL   ++ G +HRD+   NIL++ N V K+SDFGLS+      
Sbjct: 116 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 172
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E  + +   K    +  PE    ++ T  SDV+S+G+VL+EV+
Sbjct: 173 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 86.3 bits (212), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F  E  ++ +  H +++ L G   +   +++V EYM NG+L S L   D    
Sbjct: 74  TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQF 132
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSM 667
           T  Q +    G A G+ YL   ++ G +HRD+   NIL++ N V K+SDFGLS+      
Sbjct: 133 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 189
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E  + +   K    +  PE    ++ T  SDV+S+G+VL+EV+
Sbjct: 190 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 232

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 86.3 bits (212), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM+ G+L 
Sbjct: 43  TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVCEYMSKGSLL 100
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 101 DFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T    A K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 158 FGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   + + RPT
Sbjct: 217 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 86.3 bits (212), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM+ G+L 
Sbjct: 43  TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLL 100
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 101 DFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T    A K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 158 FGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   + + RPT
Sbjct: 217 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 86.3 bits (212), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F  E  ++ +  H +++ L G   +   +++V EYM NG+L S L   D    
Sbjct: 86  TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQF 144
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSM 667
           T  Q +    G A G+ YL   ++ G +HRD+   NIL++ N V K+SDFGLS+      
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E  + +   K    +  PE    ++ T  SDV+S+G+VL+EV+
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 85.9 bits (211), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 108/240 (45%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM+ G L 
Sbjct: 43  TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVMEYMSKGCLL 100
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 101 DFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T    A K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 158 FGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   + + RPT
Sbjct: 217 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 85.9 bits (211), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 107/240 (44%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM+ G+L 
Sbjct: 210 TRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLL 267
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 268 DFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 324
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL +     E+T      K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 325 FGLGRLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 383
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   + + RPT
Sbjct: 384 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 428

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 85.9 bits (211), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F  E  ++ +  H +++ L G   +   +++V EYM NG+L S L   D    
Sbjct: 86  TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQF 144
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSM 667
           T  Q +    G A G+ YL   ++ G +HRD+   NIL++ N V K+SDFGLS+      
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E  + +   K    +  PE    ++ T  SDV+S+G+VL+EV+
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 85.9 bits (211), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F  E  ++ +  H +++ L G   +   +++V EYM NG+L S L   D    
Sbjct: 86  TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQF 144
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSM 667
           T  Q +    G A G+ YL   ++ G +HRD+   NIL++ N V K+SDFGLS+      
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E  + +   K    +  PE    ++ T  SDV+S+G+VL+EV+
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 85.9 bits (211), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F  E  ++ +  H +++ L G   +   +++V EYM NG+L S L   D    
Sbjct: 86  TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQF 144
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSM 667
           T  Q +    G A G+ YL   ++ G +HRD+   NIL++ N V K+SDFGLS+      
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E  + +   K    +  PE    ++ T  SDV+S+G+VL+EV+
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 107/240 (44%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM  G+L 
Sbjct: 40  TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLL 97
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 98  DFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 154
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E T    A K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 155 FGLARLIEDNEWTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 213
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   E + RPT
Sbjct: 214 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 258

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F  E  ++ +  H +++ L G   +   +++V EYM NG+L S L   D    
Sbjct: 84  TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQF 142
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSM 667
           T  Q +    G A G+ YL   ++ G +HRD+   NIL++ N V K+SDFGLS+      
Sbjct: 143 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 199
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E  + +   K    +  PE    ++ T  SDV+S+G+VL+EV+
Sbjct: 200 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 242

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F  E  ++ +  H +++ L G   +   +++V EYM NG+L S L   D    
Sbjct: 86  TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQF 144
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSM 667
           T  Q +    G A G+ YL   ++ G +HRD+   NIL++ N V K+SDFGLS+      
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E  + +   K    +  PE    ++ T  SDV+S+G+VL+EV+
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 108/240 (45%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM+ G L 
Sbjct: 43  TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGCLL 100
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 101 DFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T    A K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 158 FGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   + + RPT
Sbjct: 217 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 108/240 (45%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM+ G+L 
Sbjct: 43  TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLL 100
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 101 DFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E T    A K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 158 FGLARLIEDNEXTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   + + RPT
Sbjct: 217 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ K+RH  LV L     E+  + +V EYM+ G+L 
Sbjct: 43  TRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLL 100
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD++  NIL+ EN V K++D
Sbjct: 101 DFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T    A K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 158 FGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   + + RPT
Sbjct: 217 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 114/243 (46%), Gaps = 33/243 (13%)
Query: 556 FETEIEMLSKLRHRHLVSLIG-FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           F  E  ++++LRH +LV L+G   +E+  + +V EYMA G+L  +L       L     L
Sbjct: 61  FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 120
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
              +     + YL        +HRD+   N+L+ E+ VAK+SDFGL+K   S + T    
Sbjct: 121 KFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG--- 174
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
             K    +  PE    ++ + KSDV+SFG++L+E+     V  P +P             
Sbjct: 175 --KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP------------- 219
Query: 735 QKQRSLKSIIDPHLKGNYSPESLE----KFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                LK ++ P ++  Y  ++ +       E+ + C   +   RP+  ++   LE++ +
Sbjct: 220 -----LKDVV-PRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI-K 272
Query: 791 LHE 793
            HE
Sbjct: 273 THE 275

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 114/243 (46%), Gaps = 33/243 (13%)
Query: 556 FETEIEMLSKLRHRHLVSLIG-FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           F  E  ++++LRH +LV L+G   +E+  + +V EYMA G+L  +L       L     L
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 292
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
              +     + YL        +HRD+   N+L+ E+ VAK+SDFGL+K   S + T    
Sbjct: 293 KFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG--- 346
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
             K    +  PE    ++ + KSDV+SFG++L+E+     V  P +P             
Sbjct: 347 --KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP------------- 391
Query: 735 QKQRSLKSIIDPHLKGNYSPESLE----KFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                LK ++ P ++  Y  ++ +       ++ + C   +   RPT  ++   LE++ +
Sbjct: 392 -----LKDVV-PRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI-R 444
Query: 791 LHE 793
            HE
Sbjct: 445 THE 447

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 108/240 (45%), Gaps = 21/240 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +    A F  E +++ KLRH  LV L     E+  + +V EYM+ G+L 
Sbjct: 43  TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLL 100
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L G     L   Q +D     A G+ Y+        +HRD+   NIL+ EN V K++D
Sbjct: 101 DFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVCKVAD 157
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T    A K    +  PE     + T KSDV+SFG++L E+     V  
Sbjct: 158 FGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
           P +    +N           R +   ++   +    PE  E   ++  +C   + + RPT
Sbjct: 217 PGM----VN-----------REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILVYEYMANGTL 596
           + A+K+    +E+ L +FE EIE+L  L+H ++V   G C    +  + L+ EY+  G+L
Sbjct: 48  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 107
Query: 597 RSHLFGSDLPPLTWKQRLDACI------GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
           R +L          K+R+D            +G+ YL T   +  IHRD+ T NIL++  
Sbjct: 108 RDYL-------QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 157
Query: 651 FVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              K+ DFGL+K  P   E   V    +    +  PE     + +  SDV+SFGVVL+E+
Sbjct: 158 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 217

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILVYEYMANGTL 596
           + A+K+    +E+ L +FE EIE+L  L+H ++V   G C    +  + L+ EY+  G+L
Sbjct: 41  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 597 RSHLFGSDLPPLTWKQRLDACI------GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
           R +L          K+R+D            +G+ YL T   +  IHRD+ T NIL++  
Sbjct: 101 RDYL-------QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 150
Query: 651 FVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              K+ DFGL+K  P   E   V    +    +  PE     + +  SDV+SFGVVL+E+
Sbjct: 151 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILVYEYMANGTL 596
           + A+K+    +E+ L +FE EIE+L  L+H ++V   G C    +  + L+ EY+  G+L
Sbjct: 72  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 131
Query: 597 RSHLFGSDLPPLTWKQRLDACI------GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
           R +L          K+R+D            +G+ YL T   +  IHRD+ T NIL++  
Sbjct: 132 RDYL-------QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 181
Query: 651 FVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              K+ DFGL+K  P   E   V    +    +  PE     + +  SDV+SFGVVL+E+
Sbjct: 182 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILVYEYMANGTL 596
           + A+K+    +E+ L +FE EIE+L  L+H ++V   G C    +  + L+ EY+  G+L
Sbjct: 40  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 99
Query: 597 RSHLFGSDLPPLTWKQRLDACI------GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
           R +L          K+R+D            +G+ YL T   +  IHRD+ T NIL++  
Sbjct: 100 RDYL-------QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 149
Query: 651 FVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              K+ DFGL+K  P   E   V    +    +  PE     + +  SDV+SFGVVL+E+
Sbjct: 150 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 209

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILVYEYMANGTL 596
           + A+K+    +E+ L +FE EIE+L  L+H ++V   G C    +  + L+ EY+  G+L
Sbjct: 44  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 597 RSHLFGSDLPPLTWKQRLDACI------GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
           R +L          K+R+D            +G+ YL T   +  IHRD+ T NIL++  
Sbjct: 104 RDYL-------QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 153
Query: 651 FVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              K+ DFGL+K  P   E   V    +    +  PE     + +  SDV+SFGVVL+E+
Sbjct: 154 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILVYEYMANGTL 596
           + A+K+    +E+ L +FE EIE+L  L+H ++V   G C    +  + L+ EY+  G+L
Sbjct: 41  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 597 RSHLFGSDLPPLTWKQRLDACI------GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
           R +L          K+R+D            +G+ YL T   +  IHRD+ T NIL++  
Sbjct: 101 RDYL-------QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 150
Query: 651 FVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              K+ DFGL+K  P   E   V    +    +  PE     + +  SDV+SFGVVL+E+
Sbjct: 151 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILVYEYMANGTL 596
           + A+K+    +E+ L +FE EIE+L  L+H ++V   G C    +  + L+ EY+  G+L
Sbjct: 46  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 105
Query: 597 RSHLFGSDLPPLTWKQRLDACI------GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
           R +L          K+R+D            +G+ YL T   +  IHRD+ T NIL++  
Sbjct: 106 RDYL-------QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 155
Query: 651 FVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              K+ DFGL+K  P   E   V    +    +  PE     + +  SDV+SFGVVL+E+
Sbjct: 156 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 215

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILVYEYMANGTL 596
           + A+K+    +E+ L +FE EIE+L  L+H ++V   G C    +  + L+ EY+  G+L
Sbjct: 39  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 98
Query: 597 RSHLFGSDLPPLTWKQRLDACI------GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
           R +L          K+R+D            +G+ YL T   +  IHRD+ T NIL++  
Sbjct: 99  RDYL-------QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 148
Query: 651 FVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              K+ DFGL+K  P   E   V    +    +  PE     + +  SDV+SFGVVL+E+
Sbjct: 149 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 208

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILVYEYMANGTL 596
           + A+K+    +E+ L +FE EIE+L  L+H ++V   G C    +  + L+ EY+  G+L
Sbjct: 47  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 106
Query: 597 RSHLFGSDLPPLTWKQRLDACI------GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
           R +L          K+R+D            +G+ YL T   +  IHRD+ T NIL++  
Sbjct: 107 RDYL-------QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 156
Query: 651 FVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              K+ DFGL+K  P   E   V    +    +  PE     + +  SDV+SFGVVL+E+
Sbjct: 157 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 216

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILVYEYMANGTL 596
           + A+K+    +E+ L +FE EIE+L  L+H ++V   G C    +  + L+ EY+  G+L
Sbjct: 45  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 104
Query: 597 RSHLFGSDLPPLTWKQRLDACI------GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
           R +L          K+R+D            +G+ YL T   +  IHRD+ T NIL++  
Sbjct: 105 RDYL-------QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 154
Query: 651 FVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              K+ DFGL+K  P   E   V    +    +  PE     + +  SDV+SFGVVL+E+
Sbjct: 155 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F  E  ++ +  H +++ L G   +   +++V EYM NG+L S L   D    
Sbjct: 86  TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQF 144
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSM 667
           T  Q +    G A G+ YL   ++ G +HRD+   NIL++ N V K+SDFGL++      
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDP 201
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E  + +   K    +  PE    ++ T  SDV+S+G+VL+EV+
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 7/174 (4%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILVYEYMANGTL 596
           + A+K+    +E+ L +FE EIE+L  L+H ++V   G C    +  + L+ EY+  G+L
Sbjct: 44  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMS 656
           R +L  +    +   + L       +G+ YL T   +  IHRD+ T NIL++     K+ 
Sbjct: 104 RDYL-QAHAERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIG 159
Query: 657 DFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           DFGL+K  P   E   V    +    +  PE     + +  SDV+SFGVVL+E+
Sbjct: 160 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILVYEYMANGTL 596
           + A+K+    +E+ L +FE EIE+L  L+H ++V   G C    +  + L+ EY+  G+L
Sbjct: 59  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 597 RSHLFGSDLPPLTWKQRLDACI------GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
           R +L          K+R+D            +G+ YL T   +  IHRD+ T NIL++  
Sbjct: 119 RDYL-------QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 168
Query: 651 FVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              K+ DFGL+K  P   E   V    +    +  PE     + +  SDV+SFGVVL+E+
Sbjct: 169 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 9/167 (5%)
Query: 556 FETEIEMLSKLRHRHLVSLIG-FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           F  E  ++++LRH +LV L+G   +E+  + +V EYMA G+L  +L       L     L
Sbjct: 46  FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 105
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
              +     + YL        +HRD+   N+L+ E+ VAK+SDFGL+K   S + T    
Sbjct: 106 KFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG--- 159
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP 721
             K    +  PE    ++ + KSDV+SFG++L+E+     V  P +P
Sbjct: 160 --KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILVYEYMANGTL 596
           + A+K+    +E+ L +FE EIE+L  L+H ++V   G C    +  + L+ EY+  G+L
Sbjct: 59  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 597 RSHLFGSDLPPLTWKQRLDACI------GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
           R +L          K+R+D            +G+ YL T   +  IHRD+ T NIL++  
Sbjct: 119 RDYL-------QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 168
Query: 651 FVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              K+ DFGL+K  P   E   V    +    +  PE     + +  SDV+SFGVVL+E+
Sbjct: 169 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           EF  E +++  L H  LV L G C +Q  + ++ EYMANG L ++L        T +Q L
Sbjct: 65  EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLL 123
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
           + C      + YL +   +  +HRD+   N L+++  V K+SDFGLS+     E+T  S 
Sbjct: 124 EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SV 179
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
             K    +  PE     + + KSD+++FGV+++E+
Sbjct: 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 20/256 (7%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  +  +    P  +Q L  F+ E+ +L K RH +++  +G+   + ++ +V ++    +
Sbjct: 32  DVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSS 89
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           L  HL   +       + +D     A+G+ YLH    + IIHRD+K+ NI L E+   K+
Sbjct: 90  LYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKI 145
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCA 712
            DFGL+        +H    + GS  ++ PE    Q     + +SDVY+FG+VL+E++  
Sbjct: 146 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEG 772
           +      LP   IN  D  + +   R   S     ++ N  P+++++   +  +CL  + 
Sbjct: 206 Q------LPYSNINNRDQII-FMVGRGYLSPDLSKVRSN-CPKAMKR---LMAECLKKKR 254
Query: 773 KNRPTMGEVLWHLEYV 788
             RP   ++L  +E +
Sbjct: 255 DERPLFPQILASIELL 270

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           EF  E +++  L H  LV L G C +Q  + ++ EYMANG L ++L        T +Q L
Sbjct: 49  EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLL 107
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
           + C      + YL +   +  +HRD+   N L+++  V K+SDFGLS+     E+T  S 
Sbjct: 108 EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SV 163
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
             K    +  PE     + + KSD+++FGV+++E+
Sbjct: 164 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 198

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 20/256 (7%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  +  +    P  +Q L  F+ E+ +L K RH +++  +G+   + ++ +V ++    +
Sbjct: 37  DVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSS 94
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           L  HL   +       + +D     A+G+ YLH    + IIHRD+K+ NI L E+   K+
Sbjct: 95  LYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKI 150
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCA 712
            DFGL+        +H    + GS  ++ PE    Q     + +SDVY+FG+VL+E++  
Sbjct: 151 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEG 772
           +      LP   IN  D  + +   R   S     ++ N  P+++++   +  +CL  + 
Sbjct: 211 Q------LPYSNINNRDQII-FMVGRGYLSPDLSKVRSN-CPKAMKR---LMAECLKKKR 259
Query: 773 KNRPTMGEVLWHLEYV 788
             RP   ++L  +E +
Sbjct: 260 DERPLFPQILASIELL 275

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 20/256 (7%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  +  +    P  +Q L  F+ E+ +L K RH +++  +G+   + ++ +V ++    +
Sbjct: 34  DVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSS 91
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           L  HL   +       + +D     A+G+ YLH    + IIHRD+K+ NI L E+   K+
Sbjct: 92  LYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKI 147
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCA 712
            DFGL+        +H    + GS  ++ PE    Q     + +SDVY+FG+VL+E++  
Sbjct: 148 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 207
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEG 772
           +      LP   IN  D  + +   R   S     ++ N  P+++++   +  +CL  + 
Sbjct: 208 Q------LPYSNINNRDQII-FMVGRGYLSPDLSKVRSN-CPKAMKR---LMAECLKKKR 256
Query: 773 KNRPTMGEVLWHLEYV 788
             RP   ++L  +E +
Sbjct: 257 DERPLFPQILASIELL 272

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           EF  E +++  L H  LV L G C +Q  + ++ EYMANG L ++L        T +Q L
Sbjct: 50  EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLL 108
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
           + C      + YL +   +  +HRD+   N L+++  V K+SDFGLS+     E+T  S 
Sbjct: 109 EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SV 164
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
             K    +  PE     + + KSD+++FGV+++E+
Sbjct: 165 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT----LRSHLFGSDLPPLTW 610
           EF  E + + KL H  LV   G C ++  + +V EY++NG     LRSH  G  L P   
Sbjct: 49  EFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSH--GKGLEP--- 103
Query: 611 KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT 670
            Q L+ C     G+ +L +      IHRD+   N L+D +   K+SDFG+++    ++  
Sbjct: 104 SQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRY--VLDDQ 158
Query: 671 HVSTA-VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
           +VS+   K    +  PE F   + + KSDV++FG++++EV          +P D    ++
Sbjct: 159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSL-----GKMPYDLYTNSE 213
Query: 730 WAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
             +K  +   L     PHL  +          +I   C  +  + RPT  ++L  +E
Sbjct: 214 VVLKVSQGHRL---YRPHLASD-------TIYQIMYSCWHELPEKRPTFQQLLSSIE 260

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILVYEYMANGTL 596
           + A+K+    +E+ L +FE EIE+L  L+H ++V   G C    +  + L+ EY+  G+L
Sbjct: 41  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 597 RSHLFGSDLPPLTWKQRLDACI------GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
           R +L          K+R+D            +G+ YL T   +  IHRD+ T NIL++  
Sbjct: 101 RDYL-------QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 150
Query: 651 FVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              K+ DFGL+K  P   E   V    +    +  PE     + +  SDV+SFGVVL+E+
Sbjct: 151 NRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           EF  E +++  L H  LV L G C +Q  + ++ EYMANG L ++L        T +Q L
Sbjct: 56  EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLL 114
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
           + C      + YL +   +  +HRD+   N L+++  V K+SDFGLS+     E+T  S 
Sbjct: 115 EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SV 170
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
             K    +  PE     + + KSD+++FGV+++E+
Sbjct: 171 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 205

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  +  +    P  +Q L  F+ E+ +L K RH +++  +G+   + ++ +V ++    +
Sbjct: 59  DVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSS 116
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           L  HL   +       + +D     A+G+ YLH    + IIHRD+K+ NI L E+   K+
Sbjct: 117 LYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKI 172
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCA 712
            DFGL+        +H    + GS  ++ PE    Q     + +SDVY+FG+VL+E++  
Sbjct: 173 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 232
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEG 772
           +      LP   IN  D  + +   R   S     ++ N  P+++++   +AE CL  + 
Sbjct: 233 Q------LPYSNINNRDQII-FMVGRGYLSPDLSKVRSN-CPKAMKRL--MAE-CLKKKR 281
Query: 773 KNRPTMGEVLWHLEYV 788
             RP   ++L  +E +
Sbjct: 282 DERPLFPQILASIELL 297

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 20/256 (7%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  +  +    P  +Q L  F+ E+ +L K RH +++  +G+   + ++ +V ++    +
Sbjct: 37  DVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSS 94
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           L  HL   +       + +D     A+G+ YLH    + IIHRD+K+ NI L E+   K+
Sbjct: 95  LYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKI 150
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCA 712
            DFGL+        +H    + GS  ++ PE    Q     + +SDVY+FG+VL+E++  
Sbjct: 151 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEG 772
           +      LP   IN  D  + +   R   S     ++ N  P+++++   +  +CL  + 
Sbjct: 211 Q------LPYSNINNRDQII-FMVGRGYLSPDLSKVRSN-CPKAMKR---LMAECLKKKR 259
Query: 773 KNRPTMGEVLWHLEYV 788
             RP   ++L  +E +
Sbjct: 260 DERPLFPQILASIELL 275

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  +  +    P  +Q L  F+ E+ +L K RH +++  +G+   + ++ +V ++    +
Sbjct: 60  DVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSS 117
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           L  HL   +       + +D     A+G+ YLH    + IIHRD+K+ NI L E+   K+
Sbjct: 118 LYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKI 173
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCA 712
            DFGL+        +H    + GS  ++ PE    Q     + +SDVY+FG+VL+E++  
Sbjct: 174 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEG 772
           +      LP   IN  D  + +   R   S     ++ N  P+++++   +AE CL  + 
Sbjct: 234 Q------LPYSNINNRDQII-FMVGRGYLSPDLSKVRSN-CPKAMKRL--MAE-CLKKKR 282
Query: 773 KNRPTMGEVLWHLEYV 788
             RP   ++L  +E +
Sbjct: 283 DERPLFPQILASIELL 298

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 5/163 (3%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F  E  ++ +  H +++ L G   +   +++V EYM NG+L S L   D    
Sbjct: 86  TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQF 144
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSM 667
           T  Q +    G A G+ YL   ++ G +HRD+   NIL++ N V K+SDFGL +      
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E  + +   K    +  PE    ++ T  SDV+S+G+VL+EV+
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           EF  E +++  L H  LV L G C +Q  + ++ EYMANG L ++L        T +Q L
Sbjct: 45  EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLL 103
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
           + C      + YL +   +  +HRD+   N L+++  V K+SDFGLS+     E+T  S 
Sbjct: 104 EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SV 159
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
             K    +  PE     + + KSD+++FGV+++E+
Sbjct: 160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 194

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 20/256 (7%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  +  +    P  +Q L  F+ E+ +L K RH +++  +G+   + ++ +V ++    +
Sbjct: 32  DVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSS 89
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           L  HL   +       + +D     A+G+ YLH    + IIHRD+K+ NI L E+   K+
Sbjct: 90  LYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKI 145
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCA 712
            DFGL+        +H    + GS  ++ PE    Q     + +SDVY+FG+VL+E++  
Sbjct: 146 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEG 772
           +      LP   IN  D  + +   R   S     ++ N  P+++++   +  +CL  + 
Sbjct: 206 Q------LPYSNINNRDQII-FMVGRGYLSPDLSKVRSN-CPKAMKR---LMAECLKKKR 254
Query: 773 KNRPTMGEVLWHLEYV 788
             RP   ++L  +E +
Sbjct: 255 DERPLFPQILASIELL 270

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           EF  E +++  L H  LV L G C +Q  + ++ EYMANG L ++L        T +Q L
Sbjct: 50  EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLL 108
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
           + C      + YL +   +  +HRD+   N L+++  V K+SDFGLS+     E+T  S 
Sbjct: 109 EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SR 164
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
             K    +  PE     + + KSD+++FGV+++E+
Sbjct: 165 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 19/180 (10%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILVYEYMANGTL 596
           + A+K+    +E+ L +FE EIE+L  L+H ++V   G C    +  + L+ EY+  G+L
Sbjct: 42  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 101
Query: 597 RSHLFGSDLPPLTWKQRLDACI------GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
           R +L          K+R+D            +G+ YL T   +  IHR++ T NIL++  
Sbjct: 102 RDYL-------QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRNLATRNILVENE 151
Query: 651 FVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              K+ DFGL+K  P   E+  V    +    +  PE     + +  SDV+SFGVVL+E+
Sbjct: 152 NRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 211

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 122/256 (47%), Gaps = 20/256 (7%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  +  +    P  +Q L  F+ E+ +L K RH +++  +G+     ++ +V ++    +
Sbjct: 32  DVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYSTAP-QLAIVTQWCEGSS 89
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           L  HL   +       + +D     A+G+ YLH    + IIHRD+K+ NI L E+   K+
Sbjct: 90  LYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKI 145
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCA 712
            DFGL+        +H    + GS  ++ PE    Q     + +SDVY+FG+VL+E++  
Sbjct: 146 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEG 772
           +      LP   IN  D  + +   R   S     ++ N  P+++++   +  +CL  + 
Sbjct: 206 Q------LPYSNINNRDQII-FMVGRGYLSPDLSKVRSN-CPKAMKR---LMAECLKKKR 254
Query: 773 KNRPTMGEVLWHLEYV 788
             RP   ++L  +E +
Sbjct: 255 DERPLFPQILASIELL 270

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 5/155 (3%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           EF  E +++  L H  LV L G C +Q  + ++ EYMANG L ++L        T +Q L
Sbjct: 65  EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLL 123
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
           + C      + YL +   +  +HRD+   N L+++  V K+SDFGLS+     E T  S 
Sbjct: 124 EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETS-SV 179
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
             K    +  PE     + + KSD+++FGV+++E+
Sbjct: 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 83.6 bits (205), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  +  +    P  +Q L  F+ E+ +L K RH +++  +G+   + ++ +V ++    +
Sbjct: 60  DVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSS 117
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           L  HL   +       + +D     A+G+ YLH    + IIHRD+K+ NI L E+   K+
Sbjct: 118 LYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKI 173
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCA 712
            DFGL+        +H    + GS  ++ PE    Q     + +SDVY+FG+VL+E++  
Sbjct: 174 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEG 772
           +      LP   IN  D  + +   R   S     ++ N  P+++++   +AE CL  + 
Sbjct: 234 Q------LPYSNINNRDQII-FMVGRGYLSPDLSKVRSN-CPKAMKRL--MAE-CLKKKR 282
Query: 773 KNRPTMGEVLWHLEYV 788
             RP   ++L  +E +
Sbjct: 283 DERPLFPQILASIELL 298

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 83.6 bits (205), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILVYEYMANGTL 596
           + A+K+    +E+ L +FE EIE+L  L+H ++V   G C    +  + L+ E++  G+L
Sbjct: 44  VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSL 103
Query: 597 RSHLFGSDLPPLTWKQRLDACI------GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
           R +L          K+R+D            +G+ YL T   +  IHRD+ T NIL++  
Sbjct: 104 REYL-------QKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 153
Query: 651 FVAKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              K+ DFGL+K  P   E   V    +    +  PE     + +  SDV+SFGVVL+E+
Sbjct: 154 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 83.6 bits (205), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 20/256 (7%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  +  +    P  +Q L  F+ E+ +L K RH +++  +G+   + ++ +V ++    +
Sbjct: 52  DVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSS 109
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           L  HL   +       + +D     A+G+ YLH    + IIHRD+K+ NI L E+   K+
Sbjct: 110 LYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKI 165
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCA 712
            DFGL+        +H    + GS  ++ PE    Q     + +SDVY+FG+VL+E++  
Sbjct: 166 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 225
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEG 772
           +      LP   IN  D  + +   R   S     ++ N  P+++++   +  +CL  + 
Sbjct: 226 Q------LPYSNINNRDQII-FMVGRGYLSPDLSKVRSN-CPKAMKR---LMAECLKKKR 274
Query: 773 KNRPTMGEVLWHLEYV 788
             RP   ++L  +E +
Sbjct: 275 DERPLFPQILASIELL 290

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 5/163 (3%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F  E  ++ +  H +++ L G   +   M+++ EYM NG L   L   D    
Sbjct: 86  TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKD-GEF 144
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSM 667
           +  Q +    G A G+ YL   A    +HRD+   NIL++ N V K+SDFGLS+      
Sbjct: 145 SVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 201
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E T+ ++  K    +  PE    ++ T  SDV+SFG+V++EV+
Sbjct: 202 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVM 244

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 5/163 (3%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F  E  ++ +  H ++V L G       +++V E+M NG L + L   D    
Sbjct: 84  TEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHD-GQF 142
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSM 667
           T  Q +    G A G+ YL   A+ G +HRD+   NIL++ N V K+SDFGLS+      
Sbjct: 143 TVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDP 199
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E  + +T  K    +  PE    ++ T  SDV+S+G+V++EV+
Sbjct: 200 EAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 242

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 9/167 (5%)
Query: 556 FETEIEMLSKLRHRHLVSLIG-FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           F  E  ++++LRH +LV L+G   +E+  + +V EYMA G+L  +L       L     L
Sbjct: 52  FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 111
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
              +     + YL        +HRD+   N+L+ E+ VAK+SDFGL+K   S + T    
Sbjct: 112 KFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG--- 165
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP 721
             K    +  PE       + KSDV+SFG++L+E+     V  P +P
Sbjct: 166 --KLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIP 210

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 5/163 (3%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F  E  ++ +  H +++ L G   +   +++V E M NG+L S L   D    
Sbjct: 57  TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQF 115
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSM 667
           T  Q +    G A G+ YL   ++ G +HRD+   NIL++ N V K+SDFGLS+      
Sbjct: 116 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 172
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E  + +   K    +  PE    ++ T  SDV+S+G+VL+EV+
Sbjct: 173 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 5/163 (3%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F  E  ++ +  H +++ L G   +   +++V E M NG+L S L   D    
Sbjct: 86  TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQF 144
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSM 667
           T  Q +    G A G+ YL   ++ G +HRD+   NIL++ N V K+SDFGLS+      
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E  + +   K    +  PE    ++ T  SDV+S+G+VL+EV+
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 5/163 (3%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F  E  ++ +  H +++ L G   +   +++V E M NG+L S L   D    
Sbjct: 86  TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQF 144
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSM 667
           T  Q +    G A G+ YL   ++ G +HRD+   NIL++ N V K+SDFGLS+      
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E  + +   K    +  PE    ++ T  SDV+S+G+VL+EV+
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 32/192 (16%)
Query: 540 AAIKRANP-QSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL- 596
           AAIKR     S+    +F  E+E+L KL  H ++++L+G C+ +  + L  EY  +G L 
Sbjct: 45  AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 104
Query: 597 ----RSHLFGSD---------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
               +S +  +D            L+ +Q L      ARG+ YL   +++  IHRD+   
Sbjct: 105 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAAR 161
Query: 644 NILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL-----TEKSD 698
           NIL+ EN+VAK++DFGLS+             VK + G L   +   + L     T  SD
Sbjct: 162 NILVGENYVAKIADFGLSRGQ--------EVYVKKTMGRLPVRWMAIESLNYSVYTTNSD 213
Query: 699 VYSFGVVLFEVV 710
           V+S+GV+L+E+V
Sbjct: 214 VWSYGVLLWEIV 225

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 32/192 (16%)
Query: 540 AAIKRANP-QSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL- 596
           AAIKR     S+    +F  E+E+L KL  H ++++L+G C+ +  + L  EY  +G L 
Sbjct: 55  AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 114
Query: 597 ----RSHLFGSD---------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
               +S +  +D            L+ +Q L      ARG+ YL   +++  IHRD+   
Sbjct: 115 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAAR 171
Query: 644 NILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL-----TEKSD 698
           NIL+ EN+VAK++DFGLS+             VK + G L   +   + L     T  SD
Sbjct: 172 NILVGENYVAKIADFGLSRGQ--------EVYVKKTMGRLPVRWMAIESLNYSVYTTNSD 223
Query: 699 VYSFGVVLFEVV 710
           V+S+GV+L+E+V
Sbjct: 224 VWSYGVLLWEIV 235

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 548 QSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP 607
           + E+ L  FE E+   S+L H+++VS+I   +E +   LV EY+   TL  ++      P
Sbjct: 50  EKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG--P 107
Query: 608 LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM 667
           L+    ++       G+ + H   +  I+HRD+K  NIL+D N   K+ DFG++K     
Sbjct: 108 LSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
             T  +  V G+  Y  PE    +   E +D+YS G+VL+E++      N
Sbjct: 165 SLTQ-TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F  E  ++ +  H +++ L G   +   +++V EYM NG+L + L  +D    
Sbjct: 63  TEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKND-GQF 121
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSM 667
           T  Q +    G + G+ YL   ++ G +HRD+   NIL++ N V K+SDFGLS+      
Sbjct: 122 TVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 178
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E  + +   K    +  PE    ++ T  SDV+S+G+V++EVV
Sbjct: 179 EAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVV 221

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F +E  ++ +  H +++ L G        ++V EYM NG+L + L   D    
Sbjct: 90  TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQF 148
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT---GP 665
           T  Q +    G   G+ YL   ++ G +HRD+   N+L+D N V K+SDFGLS+     P
Sbjct: 149 TIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205
Query: 666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
              +T  +T  K    +  PE    +  +  SDV+SFGVV++EV+ 
Sbjct: 206 DAAYT--TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 5/181 (2%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  A+K   P +   +  F  E  ++  L+H  LV L      +  + ++ EYMA G+L 
Sbjct: 38  TKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLL 96
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L   +   +   + +D     A G+ Y+     +  IHRD++  N+L+ E+ + K++D
Sbjct: 97  DFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIAD 153
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T    A K    +  PE       T KSDV+SFG++L+E+V    +  
Sbjct: 154 FGLARVIEDNEYTAREGA-KFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPY 212
Query: 718 P 718
           P
Sbjct: 213 P 213

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 32/192 (16%)
Query: 540 AAIKRANP-QSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL- 596
           AAIKR     S+    +F  E+E+L KL  H ++++L+G C+ +  + L  EY  +G L 
Sbjct: 52  AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 111
Query: 597 ----RSHLFGSD---------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
               +S +  +D            L+ +Q L      ARG+ YL   +++  IHR++   
Sbjct: 112 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAAR 168
Query: 644 NILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL-----TEKSD 698
           NIL+ EN+VAK++DFGLS+             VK + G L   +   + L     T  SD
Sbjct: 169 NILVGENYVAKIADFGLSRGQ--------EVYVKKTMGRLPVRWMAIESLNYSVYTTNSD 220
Query: 699 VYSFGVVLFEVV 710
           V+S+GV+L+E+V
Sbjct: 221 VWSYGVLLWEIV 232

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 5/170 (2%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           F  E  ++ +L+H+ LV L      Q  + ++ EYM NG+L   L       LT  + LD
Sbjct: 50  FLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 108
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
                A G+ ++    ER  IHRD++  NIL+ +    K++DFGL++     E+T    A
Sbjct: 109 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 165
Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
            K    +  PE       T KSDV+SFG++L E+V    +  P +   ++
Sbjct: 166 -KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 214

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F +E  ++ +  H +++ L G        ++V EYM NG+L + L   D    
Sbjct: 90  TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQF 148
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT---GP 665
           T  Q +    G   G+ YL   ++ G +HRD+   N+L+D N V K+SDFGLS+     P
Sbjct: 149 TIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205
Query: 666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
               T  +T  K    +  PE    +  +  SDV+SFGVV++EV+ 
Sbjct: 206 DAAXT--TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 24/224 (10%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           F  E  ++ +L+H+ LV L      Q  + ++ EYM NG+L   L       LT  + LD
Sbjct: 55  FLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
                A G+ ++    ER  IHRD++  NIL+ +    K++DFGL++     E+T    A
Sbjct: 114 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 170
Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI--NLADWAMK 733
            K    +  PE       T KSDV+SFG++L E+V    +  P +   ++  NL      
Sbjct: 171 -KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL------ 223
Query: 734 WQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
              +R  + +     + +  PE L +   +   C  +  ++RPT
Sbjct: 224 ---ERGYRMV-----RPDNCPEELYQLMRL---CWKERPEDRPT 256

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 5/170 (2%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           F  E  ++ +L+H+ LV L      Q  + ++ EYM NG+L   L       LT  + LD
Sbjct: 60  FLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 118
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
                A G+ ++    ER  IHRD++  NIL+ +    K++DFGL++     E+T    A
Sbjct: 119 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 175
Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
            K    +  PE       T KSDV+SFG++L E+V    +  P +   ++
Sbjct: 176 -KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 224

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 5/170 (2%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           F  E  ++ +L+H+ LV L      Q  + ++ EYM NG+L   L       LT  + LD
Sbjct: 61  FLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
                A G+ ++    ER  IHRD++  NIL+ +    K++DFGL++     E+T    A
Sbjct: 120 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 176
Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
            K    +  PE       T KSDV+SFG++L E+V    +  P +   ++
Sbjct: 177 -KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 5/170 (2%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           F  E  ++ +L+H+ LV L      Q  + ++ EYM NG+L   L       LT  + LD
Sbjct: 65  FLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 123
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
                A G+ ++    ER  IHRD++  NIL+ +    K++DFGL++     E+T    A
Sbjct: 124 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 180
Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
            K    +  PE       T KSDV+SFG++L E+V    +  P +   ++
Sbjct: 181 -KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 229

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           F  E  ++ +L+H+ LV L      Q  + ++ EYM NG+L   L       LT  + LD
Sbjct: 55  FLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
                A G+ ++    ER  IHRD++  NIL+ +    K++DFGL++     E T    A
Sbjct: 114 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGA 170
Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
            K    +  PE       T KSDV+SFG++L E+V    +  P +   ++
Sbjct: 171 -KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 111/241 (46%), Gaps = 23/241 (9%)
Query: 545 ANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHLFG 602
             PQ   G   ++ EI++L  L H H++   G C++Q E  + LV EY+  G+LR +L  
Sbjct: 55  CGPQHRSG---WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR 111
Query: 603 SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK 662
             +      Q L        G+ YLH+   +  IHR++   N+LLD + + K+ DFGL+K
Sbjct: 112 HSI---GLAQLLLFAQQICEGMAYLHS---QHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
Query: 663 TGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV--CARAVINPT 719
             P   E+  V         +  PE     +    SDV+SFGV L+E++  C  +   PT
Sbjct: 166 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT 225
Query: 720 LPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEI---AEKCLDDEGKNRP 776
              + I +A      Q Q ++  + +   +G   P   +   E+    + C + E   RP
Sbjct: 226 KFLELIGIA------QGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRP 279
Query: 777 T 777
           T
Sbjct: 280 T 280

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           F  E  ++ +L+H+ LV L      Q  + ++ EYM NG+L   L       LT  + LD
Sbjct: 56  FLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 114
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
                A G+ ++    ER  IHRD++  NIL+ +    K++DFGL++     E T    A
Sbjct: 115 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 171
Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
            K    +  PE       T KSDV+SFG++L E+V    +  P +   ++
Sbjct: 172 -KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 220

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           F  E  ++ +L+H+ LV L      Q  + ++ EYM NG+L   L       LT  + LD
Sbjct: 55  FLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
                A G+ ++    ER  IHRD++  NIL+ +    K++DFGL++     E T    A
Sbjct: 114 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 170
Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
            K    +  PE       T KSDV+SFG++L E+V    +  P +   ++
Sbjct: 171 -KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           F  E  ++ +L+H+ LV L      Q  + ++ EYM NG+L   L       LT  + LD
Sbjct: 64  FLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 122
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
                A G+ ++    ER  IHRD++  NIL+ +    K++DFGL++     E T    A
Sbjct: 123 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 179
Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
            K    +  PE       T KSDV+SFG++L E+V    +  P +   ++
Sbjct: 180 -KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 228

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           F  E  ++ +L+H+ LV L      Q  + ++ EYM NG+L   L       LT  + LD
Sbjct: 63  FLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 121
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
                A G+ ++    ER  IHRD++  NIL+ +    K++DFGL++     E T    A
Sbjct: 122 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 178
Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
            K    +  PE       T KSDV+SFG++L E+V    +  P +   ++
Sbjct: 179 -KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 227

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 36/247 (14%)
Query: 551 QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTW 610
           +   EF+ E+ ++S L H ++V L G       M++  E++  G L   L      P+ W
Sbjct: 65  EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLL-DKAHPIKW 121
Query: 611 KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL---LDEN--FVAKMSDFGLSKTGP 665
             +L   +  A G+ Y+       I+HRD+++ NI    LDEN    AK++DFGLS+   
Sbjct: 122 SVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--- 177
Query: 666 SMEHTHVSTAVKGSFGYLDPEYFWRQQ--LTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
             +  H  + + G+F ++ PE    ++   TEK+D YSF ++L+ ++          P D
Sbjct: 178 --QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG------PFD 229
Query: 724 QINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLW 783
           + +       + K + +  I +  L+     +   +   + E C   + K RP       
Sbjct: 230 EYS-------YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRP------- 275
Query: 784 HLEYVLQ 790
           H  Y+++
Sbjct: 276 HFSYIVK 282

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           F  E  ++ +L+H+ LV L      Q  + ++ EYM NG+L   L       LT  + LD
Sbjct: 57  FLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 115
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
                A G+ ++    ER  IHRD++  NIL+ +    K++DFGL++     E T    A
Sbjct: 116 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 172
Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
            K    +  PE       T KSDV+SFG++L E+V    +  P +   ++
Sbjct: 173 -KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 221

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 90/165 (54%), Gaps = 7/165 (4%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F +E  ++ +  H +++ L G   +   ++++ E+M NG+L S L  +D    
Sbjct: 74  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND-GQF 132
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK--TGPS 666
           T  Q +    G A G+ YL   A+   +HRD+   NIL++ N V K+SDFGLS+     +
Sbjct: 133 TVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 189
Query: 667 MEHTHVST-AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
            + T+ S    K    +  PE    ++ T  SDV+S+G+V++EV+
Sbjct: 190 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 234

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 23/241 (9%)
Query: 545 ANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHLFG 602
             PQ   G   ++ EI++L  L H H++   G C++Q E  + LV EY+  G+LR +L  
Sbjct: 55  CGPQHRSG---WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR 111
Query: 603 SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK 662
             +      Q L        G+ YLH    +  IHR++   N+LLD + + K+ DFGL+K
Sbjct: 112 HSI---GLAQLLLFAQQICEGMAYLHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
Query: 663 TGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV--CARAVINPT 719
             P   E+  V         +  PE     +    SDV+SFGV L+E++  C  +   PT
Sbjct: 166 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT 225
Query: 720 LPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEI---AEKCLDDEGKNRP 776
              + I +A      Q Q ++  + +   +G   P   +   E+    + C + E   RP
Sbjct: 226 KFLELIGIA------QGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRP 279
Query: 777 T 777
           T
Sbjct: 280 T 280

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           F  E  ++ +L+H+ LV L      Q  + ++ EYM NG+L   L       LT  + LD
Sbjct: 55  FLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
                A G+ ++    ER  IHRD++  NIL+ +    K++DFGL++     E T    A
Sbjct: 114 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 170
Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
            K    +  PE       T KSDV+SFG++L E+V    +  P +   ++
Sbjct: 171 -KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           F  E  ++ +L+H+ LV L      Q  + ++ EYM NG+L   L       LT  + LD
Sbjct: 61  FLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
                A G+ ++    ER  IHRD++  NIL+ +    K++DFGL++     E T    A
Sbjct: 120 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 176
Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
            K    +  PE       T KSDV+SFG++L E+V    +  P +   ++
Sbjct: 177 -KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   EF +E  ++ +  H +++ L G       ++++ E+M NG L S L  +D    
Sbjct: 55  TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLND-GQF 113
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK--TGPS 666
           T  Q +    G A G+ YL   AE   +HRD+   NIL++ N V K+SDFGLS+     S
Sbjct: 114 TVIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS 170
Query: 667 MEHTHVST-AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
            + T+ S+   K    +  PE    ++ T  SD +S+G+V++EV+
Sbjct: 171 SDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 215

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 33/258 (12%)
Query: 550 EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLT 609
           E+    F  E++++  L H +++  IG   +   +  + EY+  GTLR  +   D     
Sbjct: 48  EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMD-SQYP 106
Query: 610 WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS------KT 663
           W QR+      A G+ YLH+     IIHRD+ + N L+ EN    ++DFGL+      KT
Sbjct: 107 WSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163
Query: 664 GP------SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
            P                V G+  ++ PE    +   EK DV+SFG+VL E++  R   +
Sbjct: 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
Query: 718 PT-LPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRP 776
           P  LP+      D+ +      +++  +D +   N  P     F  I  +C D + + RP
Sbjct: 223 PDYLPRTM----DFGL------NVRGFLDRYCPPNCPPS----FFPITVRCCDLDPEKRP 268
Query: 777 TMGEVLWHLEYVLQLHEA 794
           +  ++   LE  L++H A
Sbjct: 269 SFVKLEHWLE-TLRMHLA 285

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 5/170 (2%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           F  E  ++ +L+H+ LV L      Q  + ++ EYM NG+L   L       LT  + LD
Sbjct: 51  FLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 109
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
                A G+ ++    ER  IHR+++  NIL+ +    K++DFGL++     E+T    A
Sbjct: 110 MAAQIAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 166
Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
            K    +  PE       T KSDV+SFG++L E+V    +  P +   ++
Sbjct: 167 -KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 215

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   EF +E  ++ +  H +++ L G       ++++ E+M NG L S L  +D    
Sbjct: 57  TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLND-GQF 115
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
           T  Q +    G A G+ YL   AE   +HRD+   NIL++ N V K+SDFGLS+    +E
Sbjct: 116 TVIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRF---LE 169
Query: 669 HTHVSTAVKGSFG------YLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
                     S G      +  PE    ++ T  SD +S+G+V++EV+
Sbjct: 170 ENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 217

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 5/183 (2%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           + T  A+K   P +   +  F  E  ++  L+H  LV L     ++  + ++ E+MA G+
Sbjct: 35  NSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGS 93
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           L   L   +   +   + +D     A G+ Y+     +  IHRD++  N+L+ E+ + K+
Sbjct: 94  LLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKI 150
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           +DFGL++     E+T    A K    +  PE       T KS+V+SFG++L+E+V    +
Sbjct: 151 ADFGLARVIEDNEYTAREGA-KFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKI 209
Query: 716 INP 718
             P
Sbjct: 210 PYP 212

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 8/175 (4%)
Query: 540 AAIKRANPQSE-QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ--NEMILVYEYMANGTL 596
            A+K   P+S    +A+ + EIE+L  L H ++V   G C E   N + L+ E++ +G+L
Sbjct: 53  VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSL 112
Query: 597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMS 656
           + +L   +   +  KQ+L   +   +G+ YL     R  +HRD+   N+L++     K+ 
Sbjct: 113 KEYL-PKNKNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIG 168
Query: 657 DFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           DFGL+K   +  E   V         +  PE   + +    SDV+SFGV L E++
Sbjct: 169 DFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 8/175 (4%)
Query: 540 AAIKRANPQSE-QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ--NEMILVYEYMANGTL 596
            A+K   P+S    +A+ + EIE+L  L H ++V   G C E   N + L+ E++ +G+L
Sbjct: 41  VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSL 100
Query: 597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMS 656
           + +L   +   +  KQ+L   +   +G+ YL     R  +HRD+   N+L++     K+ 
Sbjct: 101 KEYL-PKNKNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIG 156
Query: 657 DFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           DFGL+K   +  E   V         +  PE   + +    SDV+SFGV L E++
Sbjct: 157 DFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 108/241 (44%), Gaps = 23/241 (9%)
Query: 545 ANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN--EMILVYEYMANGTLRSHLFG 602
           A PQ   G   ++ EI++L  L H H++   G C++     + LV EY+  G+LR +L  
Sbjct: 72  AGPQHRSG---WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR 128
Query: 603 SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK 662
             +      Q L        G+ YLH    +  IHRD+   N+LLD + + K+ DFGL+K
Sbjct: 129 HSI---GLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
Query: 663 TGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV--CARAVINPT 719
             P   E   V         +  PE     +    SDV+SFGV L+E++  C  +   PT
Sbjct: 183 AVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT 242
Query: 720 LPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEI---AEKCLDDEGKNRP 776
              + I +A      Q Q ++  + +   +G   P   +   E+    + C + E   RP
Sbjct: 243 KFLELIGIA------QGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRP 296
Query: 777 T 777
           T
Sbjct: 297 T 297

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +F +E  ++ +  H +++ L G   +   ++++ EYM NG+L + L  +D    T  Q +
Sbjct: 76  DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKND-GRFTVIQLV 134
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVS 673
               G   G+ YL   ++   +HRD+   NIL++ N V K+SDFG+S+      E  + +
Sbjct: 135 GMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 191
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
              K    +  PE    ++ T  SDV+S+G+V++EV+
Sbjct: 192 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 228

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +F +E  ++ +  H +++ L G   +   ++++ EYM NG+L + L  +D    T  Q +
Sbjct: 55  DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKND-GRFTVIQLV 113
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVS 673
               G   G+ YL   ++   +HRD+   NIL++ N V K+SDFG+S+      E  + +
Sbjct: 114 GMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 170
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
              K    +  PE    ++ T  SDV+S+G+V++EV+
Sbjct: 171 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 207

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +F +E  ++ +  H +++ L G   +   ++++ EYM NG+L + L  +D    T  Q +
Sbjct: 61  DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKND-GRFTVIQLV 119
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVS 673
               G   G+ YL   ++   +HRD+   NIL++ N V K+SDFG+S+      E  + +
Sbjct: 120 GMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 176
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
              K    +  PE    ++ T  SDV+S+G+V++EV+
Sbjct: 177 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 213

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 36/247 (14%)
Query: 551 QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTW 610
           +   EF+ E+ ++S L H ++V L G       M++  E++  G L   L      P+ W
Sbjct: 65  EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLL-DKAHPIKW 121
Query: 611 KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL---LDEN--FVAKMSDFGLSKTGP 665
             +L   +  A G+ Y+       I+HRD+++ NI    LDEN    AK++DFG S+   
Sbjct: 122 SVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--- 177
Query: 666 SMEHTHVSTAVKGSFGYLDPEYFWRQQ--LTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
             +  H  + + G+F ++ PE    ++   TEK+D YSF ++L+ ++          P D
Sbjct: 178 --QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG------PFD 229
Query: 724 QINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLW 783
           + +       + K + +  I +  L+     +   +   + E C   + K RP       
Sbjct: 230 EYS-------YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRP------- 275
Query: 784 HLEYVLQ 790
           H  Y+++
Sbjct: 276 HFSYIVK 282

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 36/247 (14%)
Query: 551 QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTW 610
           +   EF+ E+ ++S L H ++V L G       M++  E++  G L   L      P+ W
Sbjct: 65  EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLL-DKAHPIKW 121
Query: 611 KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL---LDEN--FVAKMSDFGLSKTGP 665
             +L   +  A G+ Y+       I+HRD+++ NI    LDEN    AK++DF LS+   
Sbjct: 122 SVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--- 177
Query: 666 SMEHTHVSTAVKGSFGYLDPEYFWRQQ--LTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
             +  H  + + G+F ++ PE    ++   TEK+D YSF ++L+ ++          P D
Sbjct: 178 --QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG------PFD 229
Query: 724 QINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLW 783
           + +       + K + +  I +  L+     +   +   + E C   + K RP       
Sbjct: 230 EYS-------YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRP------- 275
Query: 784 HLEYVLQ 790
           H  Y+++
Sbjct: 276 HFSYIVK 282

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 84/179 (46%), Gaps = 32/179 (17%)
Query: 545 ANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHLFG 602
             PQ   G   ++ EIE+L  L H H+V   G C++Q E  + LV EY+  G+LR +L  
Sbjct: 50  CGPQLRSG---WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-- 104
Query: 603 SDLPPLTWKQRLDACIGAAR----------GLHYLHTGAERGIIHRDVKTTNILLDENFV 652
                         C+G A+          G+ YLH    +  IHR +   N+LLD + +
Sbjct: 105 -----------PRHCVGLAQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDRL 150
Query: 653 AKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
            K+ DFGL+K  P   E+  V         +  PE     +    SDV+SFGV L+E++
Sbjct: 151 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 84/179 (46%), Gaps = 32/179 (17%)
Query: 545 ANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHLFG 602
             PQ   G   ++ EIE+L  L H H+V   G C++Q E  + LV EY+  G+LR +L  
Sbjct: 49  CGPQLRSG---WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-- 103
Query: 603 SDLPPLTWKQRLDACIGAAR----------GLHYLHTGAERGIIHRDVKTTNILLDENFV 652
                         C+G A+          G+ YLH    +  IHR +   N+LLD + +
Sbjct: 104 -----------PRHCVGLAQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDRL 149
Query: 653 AKMSDFGLSKTGPS-MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
            K+ DFGL+K  P   E+  V         +  PE     +    SDV+SFGV L+E++
Sbjct: 150 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 20/166 (12%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEM----ILVYEYMANGTLRS--HLFGSDLPPLT 609
           F  E +  + L H  +V++    + +        +V EY+   TLR   H  G    P+T
Sbjct: 59  FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG----PMT 114
Query: 610 WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK----TGP 665
            K+ ++    A + L++ H   + GIIHRDVK  NIL+      K+ DFG+++    +G 
Sbjct: 115 PKRAIEVIADACQALNFSH---QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGN 171
Query: 666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           S+  T    AV G+  YL PE      +  +SDVYS G VL+EV+ 
Sbjct: 172 SVXQT---AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 89/165 (53%), Gaps = 7/165 (4%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F +E  ++ +  H +++ L G   +   ++++ E+M NG+L S L  +D    
Sbjct: 48  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND-GQF 106
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK--TGPS 666
           T  Q +    G A G+ YL   A+   +HR +   NIL++ N V K+SDFGLS+     +
Sbjct: 107 TVIQLVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDT 163
Query: 667 MEHTHVST-AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
            + T+ S    K    +  PE    ++ T  SDV+S+G+V++EV+
Sbjct: 164 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 208

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  AIK   P +      F  E +++ KL+H  LV L     E+  + +V EYM  G+L 
Sbjct: 34  TKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYAVVSEE-PIYIVTEYMNKGSLL 91
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L   +   L     +D     A G+ Y+        IHRD+++ NIL+    + K++D
Sbjct: 92  DFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGNGLICKIAD 148
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E T    A K    +  PE     + T KSDV+SFG++L E+V    V  
Sbjct: 149 FGLARLIEDNEXTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPY 207
Query: 718 PTL 720
           P +
Sbjct: 208 PGM 210

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           EF  E  ++ +++H +LV L+G C  +    +V EYM  G L  +L   +   +T    L
Sbjct: 74  EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLL 133
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 +  + YL    ++  IHRD+   N L+ EN V K++DFGLS+      +T    
Sbjct: 134 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYT-AHA 189
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
             K    +  PE       + KSDV++FGV+L+E+        P +   Q+
Sbjct: 190 GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 240

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 20/166 (12%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEM----ILVYEYMANGTLRS--HLFGSDLPPLT 609
           F  E +  + L H  +V++    + +        +V EY+   TLR   H  G    P+T
Sbjct: 59  FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG----PMT 114
Query: 610 WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK----TGP 665
            K+ ++    A + L++ H   + GIIHRDVK  NI++      K+ DFG+++    +G 
Sbjct: 115 PKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           S+  T    AV G+  YL PE      +  +SDVYS G VL+EV+ 
Sbjct: 172 SVTQT---AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 20/166 (12%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEM----ILVYEYMANGTLRS--HLFGSDLPPLT 609
           F  E +  + L H  +V++    + +        +V EY+   TLR   H  G    P+T
Sbjct: 59  FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG----PMT 114
Query: 610 WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK----TGP 665
            K+ ++    A + L++ H   + GIIHRDVK  NI++      K+ DFG+++    +G 
Sbjct: 115 PKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           S+  T    AV G+  YL PE      +  +SDVYS G VL+EV+ 
Sbjct: 172 SVTQT---AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 20/166 (12%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEM----ILVYEYMANGTLRS--HLFGSDLPPLT 609
           F  E +  + L H  +V++    + +        +V EY+   TLR   H  G    P+T
Sbjct: 59  FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG----PMT 114
Query: 610 WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK----TGP 665
            K+ ++    A + L++ H   + GIIHRDVK  NI++      K+ DFG+++    +G 
Sbjct: 115 PKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           S+  T    AV G+  YL PE      +  +SDVYS G VL+EV+ 
Sbjct: 172 SVTQT---AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 20/166 (12%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEM----ILVYEYMANGTLRS--HLFGSDLPPLT 609
           F  E +  + L H  +V++    + +        +V EY+   TLR   H  G    P+T
Sbjct: 59  FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG----PMT 114
Query: 610 WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK----TGP 665
            K+ ++    A + L++ H   + GIIHRDVK  NI++      K+ DFG+++    +G 
Sbjct: 115 PKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           S+  T    AV G+  YL PE      +  +SDVYS G VL+EV+ 
Sbjct: 172 SVTQT---AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 6/188 (3%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  A+K   P S   +  F  E  ++  L+H  LV L     ++  + ++ E+MA G+L 
Sbjct: 40  TKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLL 97
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L   +       + +D     A G+ ++    +R  IHRD++  NIL+  + V K++D
Sbjct: 98  DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIAD 154
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T    A K    +  PE       T KSDV+SFG++L E+V    +  
Sbjct: 155 FGLARVIEDNEYTAREGA-KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 213
Query: 718 PTLPKDQI 725
           P +   ++
Sbjct: 214 PGMSNPEV 221

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 6/188 (3%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  A+K   P S   +  F  E  ++  L+H  LV L     ++  + ++ E+MA G+L 
Sbjct: 213 TKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLL 270
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L   +       + +D     A G+ ++    +R  IHRD++  NIL+  + V K++D
Sbjct: 271 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIAD 327
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++     E+T    A K    +  PE       T KSDV+SFG++L E+V    +  
Sbjct: 328 FGLARVIEDNEYTAREGA-KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 386
Query: 718 PTLPKDQI 725
           P +   ++
Sbjct: 387 PGMSNPEV 394

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEM----ILVYEYMANGTLRS--HLFGSDLPPLT 609
           F  E +  + L H  +V++    + +        +V EY+   TLR   H  G    P+T
Sbjct: 76  FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG----PMT 131
Query: 610 WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK----TGP 665
            K+ ++    A + L++ H   + GIIHRDVK  NI++      K+ DFG+++    +G 
Sbjct: 132 PKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 188
Query: 666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           S+  T    AV G+  YL PE      +  +SDVYS G VL+EV+
Sbjct: 189 SVTQT---AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 230

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   ++   
Sbjct: 53  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+      +T  
Sbjct: 113 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-A 168
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 222
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 223 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGS----- 603
           S   L +  +E  +L ++ H H++ L G C +   ++L+ EY   G+LR  L  S     
Sbjct: 66  SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 604 -----------------DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL 646
                            D   LT    +      ++G+ YL   AE  ++HRD+   NIL
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNIL 182
Query: 647 LDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
           + E    K+SDFGLS+     +     +  +    ++  E  +    T +SDV+SFGV+L
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 707 FEVVCARAVINPTLPKDQI 725
           +E+V       P +P +++
Sbjct: 243 WEIVTLGGNPYPGIPPERL 261

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   ++   
Sbjct: 53  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+      +T  
Sbjct: 113 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-A 168
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 222
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 223 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   ++   
Sbjct: 53  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+      +T  
Sbjct: 113 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-A 168
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 222
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 223 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   ++   
Sbjct: 58  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 117
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+      +T  
Sbjct: 118 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-A 173
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 227
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 228 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   ++   
Sbjct: 53  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+      +T  
Sbjct: 113 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-A 168
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 222
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 223 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   ++   
Sbjct: 51  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV 110
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+       T  
Sbjct: 111 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT-A 166
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 167 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY------ 220
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 221 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   +    
Sbjct: 54  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 113
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+      +T  
Sbjct: 114 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAP 170
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
           + A K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 171 AGA-KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 223
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 224 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 272

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   +    
Sbjct: 58  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV 117
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+      +T  
Sbjct: 118 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-A 173
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 227
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 228 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 32/260 (12%)
Query: 537 CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI-LVYEYMANGT 595
           C + ++ R      Q +  F  E  ++  L H ++++LIG       +  ++  YM +G 
Sbjct: 52  CAIKSLSRIT--EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGD 109
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           L   +      P T K  +   +  ARG+ YL   AE+  +HRD+   N +LDE+F  K+
Sbjct: 110 LLQFIRSPQRNP-TVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKV 165
Query: 656 SDFGLSKTGPSME------HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           +DFGL++     E      H H    VK    +   E     + T KSDV+SFGV+L+E+
Sbjct: 166 ADFGLARDILDREYYSVQQHRHARLPVK----WTALESLQTYRFTTKSDVWSFGVLLWEL 221
Query: 710 VCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLD 769
           +   A      P   I+  D      + R L        +  Y P+SL    ++ ++C +
Sbjct: 222 LTRGAP-----PYRHIDPFDLTHFLAQGRRLP-------QPEYCPDSLY---QVMQQCWE 266
Query: 770 DEGKNRPTMGEVLWHLEYVL 789
            +   RPT   ++  +E ++
Sbjct: 267 ADPAVRPTFRVLVGEVEQIV 286

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGS----- 603
           S   L +  +E  +L ++ H H++ L G C +   ++L+ EY   G+LR  L  S     
Sbjct: 66  SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 604 -----------------DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL 646
                            D   LT    +      ++G+ YL   AE  ++HRD+   NIL
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNIL 182
Query: 647 LDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
           + E    K+SDFGLS+     +     +  +    ++  E  +    T +SDV+SFGV+L
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 707 FEVVCARAVINPTLPKDQI 725
           +E+V       P +P +++
Sbjct: 243 WEIVTLGGNPYPGIPPERL 261

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 55  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 112
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS   T +S 
Sbjct: 113 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS- 168
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 169 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  L
Sbjct: 71  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYL 123
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
            +HL G+DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 124 VTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 180
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 181 XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 240
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 241 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   +    
Sbjct: 58  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 117
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+      +T  
Sbjct: 118 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-A 173
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 227
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 228 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   +    
Sbjct: 57  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 116
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+      +T  
Sbjct: 117 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-A 172
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 173 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 226
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 227 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   +    
Sbjct: 55  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 114
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+      +T  
Sbjct: 115 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAP 171
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
           + A K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 172 AGA-KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 224
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 225 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 273

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   +    
Sbjct: 53  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 112
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+      +T  
Sbjct: 113 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-A 168
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 222
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 223 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   +    
Sbjct: 58  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 117
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+      +T  
Sbjct: 118 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-A 173
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 227
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 228 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 23/240 (9%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   ++   
Sbjct: 51  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 110
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK--TGPSMEHT 670
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+  TG +    
Sbjct: 111 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFT-- 165
Query: 671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADW 730
                 K    +  PE     + + KSDV++FGV+L+E+        P +   Q+     
Sbjct: 166 -AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY---- 220
Query: 731 AMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                       +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 221 -----------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   +    
Sbjct: 66  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 125
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+      +T  
Sbjct: 126 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-A 181
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 182 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 235
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 236 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 284

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   ++   
Sbjct: 260 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 319
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHR++   N L+ EN + K++DFGLS+      +T  
Sbjct: 320 LLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT-A 375
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------- 428
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 429 --------YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 23/240 (9%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   ++   
Sbjct: 51  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 110
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK--TGPSMEHT 670
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+  TG +    
Sbjct: 111 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT---X 164
Query: 671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADW 730
                 K    +  PE     + + KSDV++FGV+L+E+        P +   Q+     
Sbjct: 165 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY---- 220
Query: 731 AMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                       +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 221 -----------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGS----- 603
           S   L +  +E  +L ++ H H++ L G C +   ++L+ EY   G+LR  L  S     
Sbjct: 66  SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 604 -----------------DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL 646
                            D   LT    +      ++G+ YL   AE  ++HRD+   NIL
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNIL 182
Query: 647 LDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
           + E    K+SDFGLS+     +     +  +    ++  E  +    T +SDV+SFGV+L
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 707 FEVVCARAVINPTLPKDQI 725
           +E+V       P +P +++
Sbjct: 243 WEIVTLGGNPYPGIPPERL 261

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   +    
Sbjct: 55  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 114
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+      +T  
Sbjct: 115 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-A 170
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 171 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 224
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 225 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 273

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 72.8 bits (177), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   +    
Sbjct: 55  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 114
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+      +T  
Sbjct: 115 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-A 170
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 171 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 224
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 225 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 273

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 58  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTA 115
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL  N   K++DFG S   PS       T
Sbjct: 116 TYITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR----RT 168
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
            + G+  YL PE    +   EK D++S GV+ +E +  
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 4/157 (2%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   +    
Sbjct: 53  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 112
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+      +T  
Sbjct: 113 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-A 168
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
               K    +  PE     + + KSDV++FGV+L+E+
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 16/188 (8%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           T  A+K   P S   +  F  E  ++  L+H  LV L     ++  + ++ E+MA G+L 
Sbjct: 207 TKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLL 264
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
             L   +       + +D     A G+ ++    +R  IHRD++  NIL+  + V K++D
Sbjct: 265 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIAD 321
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
           FGL++ G            K    +  PE       T KSDV+SFG++L E+V    +  
Sbjct: 322 FGLARVG-----------AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 370
Query: 718 PTLPKDQI 725
           P +   ++
Sbjct: 371 PGMSNPEV 378

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 54  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS   T +  
Sbjct: 112 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC- 167
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 168 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 9/198 (4%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA 616
           + E+++  +L+H  ++ L  + ++ N + LV E   NG +  +L  + + P +  +    
Sbjct: 59  QNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL-KNRVKPFSENEARHF 117
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
                 G+ YLH+    GI+HRD+  +N+LL  N   K++DFGL+ T   M H    T  
Sbjct: 118 MHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLA-TQLKMPHEKHYTLC 173
Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN---LADWAMK 733
            G+  Y+ PE   R     +SDV+S G + + ++  R   +    K+ +N   LAD+ M 
Sbjct: 174 -GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP 232
Query: 734 WQKQRSLKSIIDPHLKGN 751
                  K +I   L+ N
Sbjct: 233 SFLSIEAKDLIHQLLRRN 250

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 80  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 137
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS   T +  
Sbjct: 138 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC- 193
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 194 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   +    
Sbjct: 58  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 117
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+       T  
Sbjct: 118 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT-A 173
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 227
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 228 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   +    
Sbjct: 54  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV 113
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHRD+   N L+ EN + K++DFGLS+       T  
Sbjct: 114 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT-A 169
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 170 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 223
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 224 ---------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 272

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 71  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 128
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS   T +  
Sbjct: 129 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC- 184
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 185 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 55  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 112
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS   T +  
Sbjct: 113 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC- 168
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 169 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 54  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS   T +  
Sbjct: 112 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC- 167
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 168 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           + EF  E  ++ +++H +LV L+G C  +    ++ E+M  G L  +L   +   +    
Sbjct: 299 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 358
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L      +  + YL    ++  IHR++   N L+ EN + K++DFGLS+      +T  
Sbjct: 359 LLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT-A 414
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM 732
               K    +  PE     + + KSDV++FGV+L+E+        P +   Q+       
Sbjct: 415 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------- 467
Query: 733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                     +++   +        EK  E+   C      +RP+  E+    E + Q
Sbjct: 468 --------YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 517

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 54  QLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS        
Sbjct: 112 TYITELANALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RA 164
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           A+ G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 165 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 54  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS   T +  
Sbjct: 112 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC- 167
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 168 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 54  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS   T +  
Sbjct: 112 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC- 167
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 168 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 59  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 116
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS   T +  
Sbjct: 117 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC- 172
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 173 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 12/161 (7%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL--------RSHLFGSDLPPL 608
           +E++++S L +H ++V+L+G C     ++++ EY   G L         + L   D  PL
Sbjct: 90  SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 149
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L      A+G+ +L   A +  IHRDV   N+LL    VAK+ DFGL++   +  
Sbjct: 150 ELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 206
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           +  V    +    ++ PE  +    T +SDV+S+G++L+E+
Sbjct: 207 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 59  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 116
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS   T +  
Sbjct: 117 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC- 172
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 173 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 57  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 114
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS   T +  
Sbjct: 115 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC- 170
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 171 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 5/190 (2%)
Query: 536 DCTLAAIKRANPQSEQGL-AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANG 594
           D TL A+K         L A+F  E  +L +  H ++V LIG C ++  + +V E +  G
Sbjct: 138 DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197
Query: 595 TLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAK 654
              + L  ++   L  K  L     AA G+ YL +   +  IHRD+   N L+ E  V K
Sbjct: 198 DFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLK 253
Query: 655 MSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA 714
           +SDFG+S+      +       +    +  PE     + + +SDV+SFG++L+E     A
Sbjct: 254 ISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGA 313
Query: 715 VINPTLPKDQ 724
              P L   Q
Sbjct: 314 SPYPNLSNQQ 323

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 57  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 114
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS        
Sbjct: 115 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----A 167
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           A+ G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 168 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 54  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS   T +  
Sbjct: 112 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC- 167
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 168 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 12/161 (7%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL--------RSHLFGSDLPPL 608
           +E++++S L +H ++V+L+G C     ++++ EY   G L         + L   D  PL
Sbjct: 98  SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 157
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L      A+G+ +L   A +  IHRDV   N+LL    VAK+ DFGL++   +  
Sbjct: 158 ELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 214
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           +  V    +    ++ PE  +    T +SDV+S+G++L+E+
Sbjct: 215 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 59  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 116
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS   T +  
Sbjct: 117 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC- 172
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 173 ---GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 58  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 115
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS   T +  
Sbjct: 116 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC- 171
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 172 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 13/194 (6%)
Query: 536 DCTLAAIKRANPQSEQGL-AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANG 594
           D TL A+K         L A+F  E  +L +  H ++V LIG C ++  + +V E +  G
Sbjct: 138 DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197
Query: 595 TLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAK 654
              + L  ++   L  K  L     AA G+ YL +   +  IHRD+   N L+ E  V K
Sbjct: 198 DFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLK 253
Query: 655 MSDFGLSKTGPSMEHTHVSTAVKG----SFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           +SDFG+S+     E   V  A  G       +  PE     + + +SDV+SFG++L+E  
Sbjct: 254 ISDFGMSRE----EADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETF 309
Query: 711 CARAVINPTLPKDQ 724
              A   P L   Q
Sbjct: 310 SLGASPYPNLSNQQ 323

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 17/163 (10%)
Query: 554 AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPP 607
            EF  E  +++ + H HLV L+G C     + LV + M +G L  ++       GS L  
Sbjct: 85  VEFMDEALIMASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQL-- 141
Query: 608 LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM 667
                 L+ C+  A+G+ YL    ER ++HRD+   N+L+      K++DFGL++     
Sbjct: 142 -----LLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 193
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E  + +   K    ++  E    ++ T +SDV+S+GV ++E++
Sbjct: 194 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 236

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGS------------- 603
           +E++M+++L  H ++V+L+G C     + L++EY   G L ++L                
Sbjct: 97  SELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYEN 156
Query: 604 --------DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
                   DL  LT++  L      A+G+ +L     +  +HRD+   N+L+    V K+
Sbjct: 157 QKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKI 213
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
            DFGL++   S  +  V    +    ++ PE  +    T KSDV+S+G++L+E+      
Sbjct: 214 CDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN 273
Query: 716 INPTLPKD 723
             P +P D
Sbjct: 274 PYPGIPVD 281

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 53  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 110
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS   T +  
Sbjct: 111 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC- 166
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 167 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 54  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS        
Sbjct: 112 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RA 164
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           A+ G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 165 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   G +   L    L     ++  
Sbjct: 59  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTA 116
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS   T +  
Sbjct: 117 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC- 172
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 173 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 51  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 108
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS       T
Sbjct: 109 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RT 161
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
            + G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 162 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 57  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 114
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS   T +  
Sbjct: 115 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC- 170
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 171 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 17/163 (10%)
Query: 554 AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPP 607
            EF  E  +++ + H HLV L+G C     + LV + M +G L  ++       GS L  
Sbjct: 62  VEFMDEALIMASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQL-- 118
Query: 608 LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM 667
                 L+ C+  A+G+ YL    ER ++HRD+   N+L+      K++DFGL++     
Sbjct: 119 -----LLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 170
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           E  + +   K    ++  E    ++ T +SDV+S+GV ++E++
Sbjct: 171 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 213

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 37/259 (14%)
Query: 538 TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  A+K  N   S +   EF  E  ++      H+V L+G   +    ++V E MA+G L
Sbjct: 48  TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 107
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L             PP T ++ +      A G+ YL+    +  +HRD+   N ++ 
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVA 164
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKG--SFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
            +F  K+ DFG+++     E  +     KG     ++ PE       T  SD++SFGVVL
Sbjct: 165 HDFTVKIGDFGMTRD--IYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
Query: 707 FEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY--SPESL-EKFGEI 763
           +E+          L  +Q+              LK ++D    G Y   P++  E+  ++
Sbjct: 223 WEITSLAEQPYQGLSNEQV--------------LKFVMD----GGYLDQPDNCPERVTDL 264
Query: 764 AEKCLDDEGKNRPTMGEVL 782
              C     K RPT  E++
Sbjct: 265 MRMCWQFNPKMRPTFLEIV 283

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 102/250 (40%), Gaps = 26/250 (10%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP- 607
           SEQ   +F  E  ++SKL H+++V  IG   +     ++ E MA G L+S L  +   P 
Sbjct: 88  SEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 147
Query: 608 ----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGL 660
               L     L      A G  YL    E   IHRD+   N LL       VAK+ DFG+
Sbjct: 148 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL 720
           ++      +            ++ PE F     T K+D +SFGV+L+E+     +  P+ 
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 263
Query: 721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGE 780
            K    + ++     +    K+   P  +             I  +C   + ++RP    
Sbjct: 264 -KSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAI 309
Query: 781 VLWHLEYVLQ 790
           +L  +EY  Q
Sbjct: 310 ILERIEYCTQ 319

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 102/250 (40%), Gaps = 26/250 (10%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP- 607
           SEQ   +F  E  ++SKL H+++V  IG   +     ++ E MA G L+S L  +   P 
Sbjct: 74  SEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 608 ----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGL 660
               L     L      A G  YL    E   IHRD+   N LL       VAK+ DFG+
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL 720
           ++      +            ++ PE F     T K+D +SFGV+L+E+     +  P+ 
Sbjct: 191 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 249
Query: 721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGE 780
            K    + ++     +    K+   P  +             I  +C   + ++RP    
Sbjct: 250 -KSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAI 295
Query: 781 VLWHLEYVLQ 790
           +L  +EY  Q
Sbjct: 296 ILERIEYCTQ 305

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 110/262 (41%), Gaps = 43/262 (16%)
Query: 538 TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  A+K  N   S +   EF  E  ++      H+V L+G   +    ++V E MA+G L
Sbjct: 48  TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 107
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L             PP T ++ +      A G+ YL+    +  +HRD+   N ++ 
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVA 164
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLD-----PEYFWRQQLTEKSDVYSFG 703
            +F  K+ DFG+++     +        KG  G L      PE       T  SD++SFG
Sbjct: 165 HDFTVKIGDFGMTR-----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 704 VVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY--SPESL-EKF 760
           VVL+E+          L  +Q+              LK ++D    G Y   P++  E+ 
Sbjct: 220 VVLWEITSLAEQPYQGLSNEQV--------------LKFVMD----GGYLDQPDNCPERV 261
Query: 761 GEIAEKCLDDEGKNRPTMGEVL 782
            ++   C     K RPT  E++
Sbjct: 262 TDLMRMCWQFNPKMRPTFLEIV 283

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 37/259 (14%)
Query: 538 TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  A+K  N   S +   EF  E  ++      H+V L+G   +    ++V E MA+G L
Sbjct: 48  TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 107
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L             PP T ++ +      A G+ YL+    +  +HRD+   N ++ 
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVA 164
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKG--SFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
            +F  K+ DFG+++     E  +     KG     ++ PE       T  SD++SFGVVL
Sbjct: 165 HDFTVKIGDFGMTRD--IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
Query: 707 FEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY--SPESL-EKFGEI 763
           +E+          L  +Q+              LK ++D    G Y   P++  E+  ++
Sbjct: 223 WEITSLAEQPYQGLSNEQV--------------LKFVMD----GGYLDQPDNCPERVTDL 264
Query: 764 AEKCLDDEGKNRPTMGEVL 782
              C     K RPT  E++
Sbjct: 265 MRMCWQFNPKMRPTFLEIV 283

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 58  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTA 115
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL  N   K++DFG S   PS        
Sbjct: 116 TYITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR----RD 168
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
            + G+  YL PE    +   EK D++S GV+ +E +  
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG--SDLPPLTWKQRLD 615
            E ++L+K+  R +VSL    + + ++ LV   M  G +R H++    D P     + + 
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS---KTGPSMEHTHV 672
                  GL +LH   +R II+RD+K  N+LLD++   ++SD GL+   K G +    + 
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA 714
            T      G++ PE    ++     D ++ GV L+E++ AR 
Sbjct: 351 GTP-----GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG--SDLPPLTWKQRLD 615
            E ++L+K+  R +VSL    + + ++ LV   M  G +R H++    D P     + + 
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS---KTGPSMEHTHV 672
                  GL +LH   +R II+RD+K  N+LLD++   ++SD GL+   K G +    + 
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA 714
            T      G++ PE    ++     D ++ GV L+E++ AR 
Sbjct: 351 GTP-----GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG--SDLPPLTWKQRLD 615
            E ++L+K+  R +VSL    + + ++ LV   M  G +R H++    D P     + + 
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS---KTGPSMEHTHV 672
                  GL +LH   +R II+RD+K  N+LLD++   ++SD GL+   K G +    + 
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA 714
            T      G++ PE    ++     D ++ GV L+E++ AR 
Sbjct: 351 GTP-----GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 80  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 137
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS     +  
Sbjct: 138 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC- 193
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 194 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 113/264 (42%), Gaps = 52/264 (19%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSD-LPPLTWKQRLD 615
           ETEIE+L KL H  ++ +  F D ++  I V E M  G L   + G+  L   T K    
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHV 672
             + A + LH      E GIIHRD+K  N+LL   +E+ + K++DFG SK    +  T +
Sbjct: 261 QMLLAVQYLH------ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSL 311
Query: 673 STAVKGSFGYLDPEYFWR---QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
              + G+  YL PE              D +S GV+LF  +C       +  + Q++L D
Sbjct: 312 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF--ICLSGYPPFSEHRTQVSLKD 369
Query: 730 WAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLD-------DEGKNRPTMGEVL 782
                              K N+ PE    + E++EK LD        + K R T  E L
Sbjct: 370 QITSG--------------KYNFIPEV---WAEVSEKALDLVKKLLVVDPKARFTTEEAL 412
Query: 783 WHLEYVLQLHEAWMRTDDRQNSFS 806
            H          W++ +D +  F 
Sbjct: 413 RH---------PWLQDEDMKRKFQ 427

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 113/264 (42%), Gaps = 52/264 (19%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSD-LPPLTWKQRLD 615
           ETEIE+L KL H  ++ +  F D ++  I V E M  G L   + G+  L   T K    
Sbjct: 63  ETEIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHV 672
             + A + LH      E GIIHRD+K  N+LL   +E+ + K++DFG SK    +  T +
Sbjct: 122 QMLLAVQYLH------ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSL 172
Query: 673 STAVKGSFGYLDPEYFWR---QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
              + G+  YL PE              D +S GV+LF  +C       +  + Q++L D
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF--ICLSGYPPFSEHRTQVSLKD 230
Query: 730 WAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLD-------DEGKNRPTMGEVL 782
                              K N+ PE    + E++EK LD        + K R T  E L
Sbjct: 231 QITSG--------------KYNFIPEV---WAEVSEKALDLVKKLLVVDPKARFTTEEAL 273
Query: 783 WHLEYVLQLHEAWMRTDDRQNSFS 806
            H          W++ +D +  F 
Sbjct: 274 RH---------PWLQDEDMKRKFQ 288

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 110/262 (41%), Gaps = 43/262 (16%)
Query: 538 TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  A+K  N   S +   EF  E  ++      H+V L+G   +    ++V E MA+G L
Sbjct: 45  TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 104
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L             PP T ++ +      A G+ YL+    +  +HRD+   N ++ 
Sbjct: 105 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVA 161
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLD-----PEYFWRQQLTEKSDVYSFG 703
            +F  K+ DFG+++     +        KG  G L      PE       T  SD++SFG
Sbjct: 162 HDFTVKIGDFGMTR-----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 216
Query: 704 VVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY--SPESL-EKF 760
           VVL+E+          L  +Q+              LK ++D    G Y   P++  E+ 
Sbjct: 217 VVLWEITSLAEQPYQGLSNEQV--------------LKFVMD----GGYLDQPDNCPERV 258
Query: 761 GEIAEKCLDDEGKNRPTMGEVL 782
            ++   C     K RPT  E++
Sbjct: 259 TDLMRMCWQFNPKMRPTFLEIV 280

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 113/264 (42%), Gaps = 52/264 (19%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSD-LPPLTWKQRLD 615
           ETEIE+L KL H  ++ +  F D ++  I V E M  G L   + G+  L   T K    
Sbjct: 63  ETEIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHV 672
             + A + LH      E GIIHRD+K  N+LL   +E+ + K++DFG SK    +  T +
Sbjct: 122 QMLLAVQYLH------ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSL 172
Query: 673 STAVKGSFGYLDPEYFWR---QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
              + G+  YL PE              D +S GV+LF  +C       +  + Q++L D
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF--ICLSGYPPFSEHRTQVSLKD 230
Query: 730 WAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLD-------DEGKNRPTMGEVL 782
                              K N+ PE    + E++EK LD        + K R T  E L
Sbjct: 231 QITSG--------------KYNFIPEV---WAEVSEKALDLVKKLLVVDPKARFTTEEAL 273
Query: 783 WHLEYVLQLHEAWMRTDDRQNSFS 806
            H          W++ +D +  F 
Sbjct: 274 RH---------PWLQDEDMKRKFQ 288

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 113/263 (42%), Gaps = 52/263 (19%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSD-LPPLTWKQRLD 615
           ETEIE+L KL H  ++ +  F D ++  I V E M  G L   + G+  L   T K    
Sbjct: 69  ETEIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHV 672
             + A + LH      E GIIHRD+K  N+LL   +E+ + K++DFG SK    +  T +
Sbjct: 128 QMLLAVQYLH------ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSL 178
Query: 673 STAVKGSFGYLDPEYFWR---QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
              + G+  YL PE              D +S GV+LF  +C       +  + Q++L D
Sbjct: 179 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF--ICLSGYPPFSEHRTQVSLKD 236
Query: 730 WAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLD-------DEGKNRPTMGEVL 782
                              K N+ PE    + E++EK LD        + K R T  E L
Sbjct: 237 QITSG--------------KYNFIPEV---WAEVSEKALDLVKKLLVVDPKARFTTEEAL 279
Query: 783 WHLEYVLQLHEAWMRTDDRQNSF 805
            H          W++ +D +  F
Sbjct: 280 RH---------PWLQDEDMKRKF 293

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 113/264 (42%), Gaps = 52/264 (19%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSD-LPPLTWKQRLD 615
           ETEIE+L KL H  ++ +  F D ++  I V E M  G L   + G+  L   T K    
Sbjct: 63  ETEIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHV 672
             + A + LH      E GIIHRD+K  N+LL   +E+ + K++DFG SK    +  T +
Sbjct: 122 QMLLAVQYLH------ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSL 172
Query: 673 STAVKGSFGYLDPEYFWR---QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
              + G+  YL PE              D +S GV+LF  +C       +  + Q++L D
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF--ICLSGYPPFSEHRTQVSLKD 230
Query: 730 WAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLD-------DEGKNRPTMGEVL 782
                              K N+ PE    + E++EK LD        + K R T  E L
Sbjct: 231 QITSG--------------KYNFIPEV---WAEVSEKALDLVKKLLVVDPKARFTTEEAL 273
Query: 783 WHLEYVLQLHEAWMRTDDRQNSFS 806
            H          W++ +D +  F 
Sbjct: 274 RH---------PWLQDEDMKRKFQ 288

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG--SDLPPLTWKQRLD 615
            E ++L+K+  R +VSL    + + ++ LV   M  G +R H++    D P     + + 
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS---KTGPSMEHTHV 672
                  GL +LH   +R II+RD+K  N+LLD++   ++SD GL+   K G +    + 
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA 714
            T      G++ PE    ++     D ++ GV L+E++ AR 
Sbjct: 351 GTP-----GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 113/264 (42%), Gaps = 52/264 (19%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSD-LPPLTWKQRLD 615
           ETEIE+L KL H  ++ +  F D ++  I V E M  G L   + G+  L   T K    
Sbjct: 62  ETEIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHV 672
             + A + LH      E GIIHRD+K  N+LL   +E+ + K++DFG SK    +  T +
Sbjct: 121 QMLLAVQYLH------ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSL 171
Query: 673 STAVKGSFGYLDPEYFWR---QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
              + G+  YL PE              D +S GV+LF  +C       +  + Q++L D
Sbjct: 172 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF--ICLSGYPPFSEHRTQVSLKD 229
Query: 730 WAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLD-------DEGKNRPTMGEVL 782
                              K N+ PE    + E++EK LD        + K R T  E L
Sbjct: 230 QITSG--------------KYNFIPEV---WAEVSEKALDLVKKLLVVDPKARFTTEEAL 272
Query: 783 WHLEYVLQLHEAWMRTDDRQNSFS 806
            H          W++ +D +  F 
Sbjct: 273 RH---------PWLQDEDMKRKFQ 287

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 56  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 113
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS     +  
Sbjct: 114 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC- 169
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 170 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 113/264 (42%), Gaps = 52/264 (19%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSD-LPPLTWKQRLD 615
           ETEIE+L KL H  ++ +  F D ++  I V E M  G L   + G+  L   T K    
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHV 672
             + A + LH      E GIIHRD+K  N+LL   +E+ + K++DFG SK    +  T +
Sbjct: 247 QMLLAVQYLH------ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSL 297
Query: 673 STAVKGSFGYLDPEYFWR---QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
              + G+  YL PE              D +S GV+LF  +C       +  + Q++L D
Sbjct: 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF--ICLSGYPPFSEHRTQVSLKD 355
Query: 730 WAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLD-------DEGKNRPTMGEVL 782
                              K N+ PE    + E++EK LD        + K R T  E L
Sbjct: 356 QITSG--------------KYNFIPEV---WAEVSEKALDLVKKLLVVDPKARFTTEEAL 398
Query: 783 WHLEYVLQLHEAWMRTDDRQNSFS 806
            H          W++ +D +  F 
Sbjct: 399 RH---------PWLQDEDMKRKFQ 413

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 37/259 (14%)
Query: 538 TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  A+K  N   S +   EF  E  ++      H+V L+G   +    ++V E MA+G L
Sbjct: 47  TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 106
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L             PP T ++ +      A G+ YL+    +  +HRD+   N ++ 
Sbjct: 107 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVA 163
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKG--SFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
            +F  K+ DFG+++     E  +     KG     ++ PE       T  SD++SFGVVL
Sbjct: 164 HDFTVKIGDFGMTRD--IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 221
Query: 707 FEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY--SPESL-EKFGEI 763
           +E+          L  +Q+              LK ++D    G Y   P++  E+  ++
Sbjct: 222 WEITSLAEQPYQGLSNEQV--------------LKFVMD----GGYLDQPDNCPERVTDL 263
Query: 764 AEKCLDDEGKNRPTMGEVL 782
              C     K RPT  E++
Sbjct: 264 MRMCWQFNPKMRPTFLEIV 282

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 25/252 (9%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
            LAA K    +SE+ L ++  EIE+L+   H ++V L+G      ++ ++ E+   G + 
Sbjct: 45  ALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVD 104
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +   D   LT  Q    C      L++LH+   + IIHRD+K  N+L+      +++D
Sbjct: 105 AIMLELDR-GLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLAD 160
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTE-----KSDVYSFGVVLFEVVCA 712
           FG+S    +++      +  G+  ++ PE    + + +     K+D++S G+ L E+   
Sbjct: 161 FGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM--- 215
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEG 772
            A I P  P  ++N     +K  K        DP      S  S+E F +  +  LD   
Sbjct: 216 -AQIEP--PHHELNPMRVLLKIAKS-------DPPTLLTPSKWSVE-FRDFLKIALDKNP 264
Query: 773 KNRPTMGEVLWH 784
           + RP+  ++L H
Sbjct: 265 ETRPSAAQLLEH 276

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 25/251 (9%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
           LAA K    +SE+ L ++  EIE+L+   H ++V L+G      ++ ++ E+   G + +
Sbjct: 38  LAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDA 97
Query: 599 HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF 658
            +   D   LT  Q    C      L++LH+   + IIHRD+K  N+L+      +++DF
Sbjct: 98  IMLELDR-GLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADF 153
Query: 659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTE-----KSDVYSFGVVLFEVVCAR 713
           G+S    +++      +  G+  ++ PE    + + +     K+D++S G+ L E+    
Sbjct: 154 GVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM---- 207
Query: 714 AVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGK 773
           A I P  P  ++N     +K  K        DP      S  S+E F +  +  LD   +
Sbjct: 208 AQIEP--PHHELNPMRVLLKIAKS-------DPPTLLTPSKWSVE-FRDFLKIALDKNPE 257
Query: 774 NRPTMGEVLWH 784
            RP+  ++L H
Sbjct: 258 TRPSAAQLLEH 268

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 56  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 113
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K+++FG S   PS   T +  
Sbjct: 114 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC- 169
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 170 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 54  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS     +  
Sbjct: 112 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC- 167
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 168 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   G +   L    L     ++  
Sbjct: 59  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTA 116
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS        
Sbjct: 117 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----X 169
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
            + G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 170 XLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 12/178 (6%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           D  +  +K+   +++    E   E +++ +L + ++V LIG C +   ++LV E    G 
Sbjct: 39  DVAIKVLKQGTEKADT--EEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGP 95
Query: 596 LRSHLFGS--DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA 653
           L   L G   ++P     + L      + G+ YL    E+  +HRD+   N+LL     A
Sbjct: 96  LHKFLVGKREEIPVSNVAELLHQ---VSMGMKYLE---EKNFVHRDLAARNVLLVNRHYA 149
Query: 654 KMSDFGLSKT-GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           K+SDFGLSK  G    +    +A K    +  PE    ++ + +SDV+S+GV ++E +
Sbjct: 150 KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL 207

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 25/252 (9%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
            LAA K  + +SE+ L ++  EI++L+   H ++V L+     +N + ++ E+ A G + 
Sbjct: 63  VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 122
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +   +  PLT  Q    C      L+YLH   +  IIHRD+K  NIL   +   K++D
Sbjct: 123 AVMLELER-PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLAD 178
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTE-----KSDVYSFGVVLFEVVCA 712
           FG+S    +        +  G+  ++ PE    +   +     K+DV+S G+ L E+   
Sbjct: 179 FGVS--AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM--- 233
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEG 772
            A I P  P  ++N     +K  K        +P      S  S   F +  +KCL+   
Sbjct: 234 -AEIEP--PHHELNPMRVLLKIAKS-------EPPTLAQPSRWS-SNFKDFLKKCLEKNV 282
Query: 773 KNRPTMGEVLWH 784
             R T  ++L H
Sbjct: 283 DARWTTSQLLQH 294

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 69.3 bits (168), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 26/250 (10%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP- 607
           SEQ   +F  E  ++SK  H+++V  IG   +     ++ E MA G L+S L  +   P 
Sbjct: 88  SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 147
Query: 608 ----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGL 660
               L     L      A G  YL    E   IHRD+   N LL       VAK+ DFG+
Sbjct: 148 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL 720
           ++      +            ++ PE F     T K+D +SFGV+L+E+     +  P+ 
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 263
Query: 721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGE 780
            K    + ++     +    K+   P  +             I  +C   + ++RP    
Sbjct: 264 -KSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAI 309
Query: 781 VLWHLEYVLQ 790
           +L  +EY  Q
Sbjct: 310 ILERIEYCTQ 319

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 69.3 bits (168), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 57  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 114
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS     +  
Sbjct: 115 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC- 170
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 171 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 69.3 bits (168), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 55  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 112
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS     +  
Sbjct: 113 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC- 168
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 169 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 69.3 bits (168), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 57  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 114
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K+++FG S   PS   T +  
Sbjct: 115 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC- 170
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 171 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 69.3 bits (168), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 22/186 (11%)
Query: 538 TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  A+K  N   S +   EF  E  ++      H+V L+G   +    ++V E MA+G L
Sbjct: 48  TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 107
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L             PP T ++ +      A G+ YL+    +  +HRD+   N ++ 
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVA 164
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLD-----PEYFWRQQLTEKSDVYSFG 703
            +F  K+ DFG+++     +        KG  G L      PE       T  SD++SFG
Sbjct: 165 HDFTVKIGDFGMTR-----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 704 VVLFEV 709
           VVL+E+
Sbjct: 220 VVLWEI 225

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 69.3 bits (168), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 26/250 (10%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP- 607
           SEQ   +F  E  ++SK  H+++V  IG   +     ++ E MA G L+S L  +   P 
Sbjct: 88  SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPS 147
Query: 608 ----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGL 660
               L     L      A G  YL    E   IHRD+   N LL       VAK+ DFG+
Sbjct: 148 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL 720
           ++      +            ++ PE F     T K+D +SFGV+L+E+     +  P+ 
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 263
Query: 721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGE 780
            K    + ++     +    K+   P  +             I  +C   + ++RP    
Sbjct: 264 -KSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAI 309
Query: 781 VLWHLEYVLQ 790
           +L  +EY  Q
Sbjct: 310 ILERIEYCTQ 319

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 25/252 (9%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
            LAA K  + +SE+ L ++  EI++L+   H ++V L+     +N + ++ E+ A G + 
Sbjct: 63  VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 122
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +   +  PLT  Q    C      L+YLH   +  IIHRD+K  NIL   +   K++D
Sbjct: 123 AVMLELER-PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLAD 178
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTE-----KSDVYSFGVVLFEVVCA 712
           FG+S    +        +  G+  ++ PE    +   +     K+DV+S G+ L E+   
Sbjct: 179 FGVS--AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM--- 233
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEG 772
            A I P  P  ++N     +K  K        +P      S  S   F +  +KCL+   
Sbjct: 234 -AEIEP--PHHELNPMRVLLKIAKS-------EPPTLAQPSRWS-SNFKDFLKKCLEKNV 282
Query: 773 KNRPTMGEVLWH 784
             R T  ++L H
Sbjct: 283 DARWTTSQLLQH 294

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++  
Sbjct: 57  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 114
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H+   + +IHRD+K  N+LL      K++DFG S   PS     +  
Sbjct: 115 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC- 170
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
              G+  YL PE    +   EK D++S GV+ +E +  +
Sbjct: 171 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 26/250 (10%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP- 607
           SEQ   +F  E  ++SK  H+++V  IG   +     ++ E MA G L+S L  +   P 
Sbjct: 65  SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 124
Query: 608 ----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGL 660
               L     L      A G  YL    E   IHRD+   N LL       VAK+ DFG+
Sbjct: 125 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 181
Query: 661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL 720
           ++      +            ++ PE F     T K+D +SFGV+L+E+     +  P+ 
Sbjct: 182 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 240
Query: 721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGE 780
            K    + ++     +    K+   P  +             I  +C   + ++RP    
Sbjct: 241 -KSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAI 286
Query: 781 VLWHLEYVLQ 790
           +L  +EY  Q
Sbjct: 287 ILERIEYCTQ 296

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 26/250 (10%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP- 607
           SEQ   +F  E  ++SK  H+++V  IG   +     ++ E MA G L+S L  +   P 
Sbjct: 74  SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 608 ----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGL 660
               L     L      A G  YL    E   IHRD+   N LL       VAK+ DFG+
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL 720
           ++      +            ++ PE F     T K+D +SFGV+L+E+     +  P+ 
Sbjct: 191 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 249
Query: 721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGE 780
            K    + ++     +    K+   P  +             I  +C   + ++RP    
Sbjct: 250 -KSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAI 295
Query: 781 VLWHLEYVLQ 790
           +L  +EY  Q
Sbjct: 296 ILERIEYCTQ 305

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 57/273 (20%)
Query: 541 AIKRANPQSEQ-GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL--- 596
           AIKR N +  Q  + E   EI+ +S+  H ++VS       ++E+ LV + ++ G++   
Sbjct: 39  AIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDI 98
Query: 597 ----------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL 646
                     +S +          ++ L+       GL YLH   + G IHRDVK  NIL
Sbjct: 99  IKHIVAKGEHKSGVLDESTIATILREVLE-------GLEYLH---KNGQIHRDVKAGNIL 148
Query: 647 LDENFVAKMSDFGLS---KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTE-KSDVYSF 702
           L E+   +++DFG+S    TG  +    V     G+  ++ PE   + +  + K+D++SF
Sbjct: 149 LGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSF 208
Query: 703 GVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII------DPHLK-GNYSPE 755
           G+   E                  LA  A  + K   +K ++       P L+ G    E
Sbjct: 209 GITAIE------------------LATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKE 250
Query: 756 SLEKFGEIAEK----CLDDEGKNRPTMGEVLWH 784
            L+K+G+   K    CL  + + RPT  E+L H
Sbjct: 251 MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 283

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 26/250 (10%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP- 607
           SEQ   +F  E  ++SK  H+++V  IG   +     ++ E MA G L+S L  +   P 
Sbjct: 73  SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPS 132
Query: 608 ----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGL 660
               L     L      A G  YL    E   IHRD+   N LL       VAK+ DFG+
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL 720
           ++      +            ++ PE F     T K+D +SFGV+L+E+     +  P+ 
Sbjct: 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 248
Query: 721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGE 780
            K    + ++     +    K+   P  +             I  +C   + ++RP    
Sbjct: 249 -KSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAI 294
Query: 781 VLWHLEYVLQ 790
           +L  +EY  Q
Sbjct: 295 ILERIEYCTQ 304

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 26/250 (10%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP- 607
           SEQ   +F  E  ++SK  H+++V  IG   +     ++ E MA G L+S L  +   P 
Sbjct: 80  SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 139
Query: 608 ----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGL 660
               L     L      A G  YL    E   IHRD+   N LL       VAK+ DFG+
Sbjct: 140 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 196
Query: 661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL 720
           ++      +            ++ PE F     T K+D +SFGV+L+E+     +  P+ 
Sbjct: 197 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 255
Query: 721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGE 780
            K    + ++     +    K+   P  +             I  +C   + ++RP    
Sbjct: 256 -KSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAI 301
Query: 781 VLWHLEYVLQ 790
           +L  +EY  Q
Sbjct: 302 ILERIEYCTQ 311

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 43/266 (16%)
Query: 541 AIKRANPQSEQ-GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL--- 596
           AIKR N +  Q  + E   EI+ +S+  H ++VS       ++E+ LV + ++ G++   
Sbjct: 44  AIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDI 103
Query: 597 ----------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL 646
                     +S +          ++ L+       GL YLH   + G IHRDVK  NIL
Sbjct: 104 IKHIVAKGEHKSGVLDESTIATILREVLE-------GLEYLH---KNGQIHRDVKAGNIL 153
Query: 647 LDENFVAKMSDFGLS---KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTE-KSDVYSF 702
           L E+   +++DFG+S    TG  +    V     G+  ++ PE   + +  + K+D++SF
Sbjct: 154 LGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSF 213
Query: 703 GVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGE 762
           G+   E+    A  +   P   + L           +L++       G    E L+K+G+
Sbjct: 214 GITAIELATGAAPYHKYPPMKVLML-----------TLQNDPPSLETGVQDKEMLKKYGK 262
Query: 763 IAEK----CLDDEGKNRPTMGEVLWH 784
              K    CL  + + RPT  E+L H
Sbjct: 263 SFRKMISLCLQKDPEKRPTAAELLRH 288

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 113/252 (44%), Gaps = 25/252 (9%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
            LAA K  + +SE+ L ++  EI++L+   H ++V L+     +N + ++ E+ A G + 
Sbjct: 63  VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 122
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           + +   +  PLT  Q    C      L+YLH   +  IIHRD+K  NIL   +   K++D
Sbjct: 123 AVMLELER-PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLAD 178
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTE-----KSDVYSFGVVLFEVVCA 712
           FG+S    +           G+  ++ PE    +   +     K+DV+S G+ L E+   
Sbjct: 179 FGVS--AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM--- 233
Query: 713 RAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEG 772
            A I P  P  ++N     +K  K         P L       S   F +  +KCL+   
Sbjct: 234 -AEIEP--PHHELNPMRVLLKIAKSEP------PTLAQPSRWSS--NFKDFLKKCLEKNV 282
Query: 773 KNRPTMGEVLWH 784
             R T  ++L H
Sbjct: 283 DARWTTSQLLQH 294

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 26/250 (10%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP- 607
           SEQ   +F  E  ++SK  H+++V  IG   +     ++ E MA G L+S L  +   P 
Sbjct: 73  SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 132
Query: 608 ----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGL 660
               L     L      A G  YL    E   IHRD+   N LL       VAK+ DFG+
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL 720
           ++      +            ++ PE F     T K+D +SFGV+L+E+     +  P+ 
Sbjct: 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 248
Query: 721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGE 780
            K    + ++     +    K+   P  +             I  +C   + ++RP    
Sbjct: 249 -KSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAI 294
Query: 781 VLWHLEYVLQ 790
           +L  +EY  Q
Sbjct: 295 ILERIEYCTQ 304

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 26/250 (10%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP- 607
           SEQ   +F  E  ++SK  H+++V  IG   +     ++ E MA G L+S L  +   P 
Sbjct: 74  SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 608 ----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGL 660
               L     L      A G  YL    E   IHRD+   N LL       VAK+ DFG+
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL 720
           ++      +            ++ PE F     T K+D +SFGV+L+E+     +  P+ 
Sbjct: 191 AQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 249
Query: 721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGE 780
            K    + ++     +    K+   P  +             I  +C   + ++RP    
Sbjct: 250 -KSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAI 295
Query: 781 VLWHLEYVLQ 790
           +L  +EY  Q
Sbjct: 296 ILERIEYCTQ 305

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 26/250 (10%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP- 607
           SEQ   +F  E  ++SK  H+++V  IG   +     ++ E MA G L+S L  +   P 
Sbjct: 90  SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 149
Query: 608 ----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGL 660
               L     L      A G  YL    E   IHRD+   N LL       VAK+ DFG+
Sbjct: 150 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 206
Query: 661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL 720
           ++      +            ++ PE F     T K+D +SFGV+L+E+     +  P+ 
Sbjct: 207 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 265
Query: 721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGE 780
            K    + ++     +    K+   P  +             I  +C   + ++RP    
Sbjct: 266 -KSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAI 311
Query: 781 VLWHLEYVLQ 790
           +L  +EY  Q
Sbjct: 312 ILERIEYCTQ 321

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 26/250 (10%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP- 607
           SEQ   +F  E  ++SK  H+++V  IG   +     ++ E MA G L+S L  +   P 
Sbjct: 91  SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 150
Query: 608 ----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGL 660
               L     L      A G  YL    E   IHRD+   N LL       VAK+ DFG+
Sbjct: 151 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 207
Query: 661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL 720
           ++      +            ++ PE F     T K+D +SFGV+L+E+     +  P+ 
Sbjct: 208 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 266
Query: 721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGE 780
            K    + ++     +    K+   P  +             I  +C   + ++RP    
Sbjct: 267 -KSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAI 312
Query: 781 VLWHLEYVLQ 790
           +L  +EY  Q
Sbjct: 313 ILERIEYCTQ 322

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 26/250 (10%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP- 607
           SEQ   +F  E  ++SK  H+++V  IG   +     ++ E MA G L+S L  +   P 
Sbjct: 114 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 173
Query: 608 ----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGL 660
               L     L      A G  YL    E   IHRD+   N LL       VAK+ DFG+
Sbjct: 174 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 230
Query: 661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL 720
           ++      +            ++ PE F     T K+D +SFGV+L+E+     +  P+ 
Sbjct: 231 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 289
Query: 721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGE 780
            K    + ++     +    K+   P  +             I  +C   + ++RP    
Sbjct: 290 -KSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAI 335
Query: 781 VLWHLEYVLQ 790
           +L  +EY  Q
Sbjct: 336 ILERIEYCTQ 345

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 29/245 (11%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQN-EMILVYEYMANGTLRSHLFG--SDLPP------ 607
           +E+++L  +  H ++V+L+G C +    ++++ E+   G L ++L    ++  P      
Sbjct: 79  SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK 138
Query: 608 --LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP 665
             LT +  +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL++   
Sbjct: 139 DFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIY 195
Query: 666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
                      +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P +  D+ 
Sbjct: 196 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 254
Query: 726 NLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL 785
                    +  R LK           +PE  +   +    C   E   RPT  E++ HL
Sbjct: 255 ---------EFXRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 301
Query: 786 EYVLQ 790
             +LQ
Sbjct: 302 GNLLQ 306

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 26/250 (10%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP- 607
           SEQ   +F  E  ++SK  H+++V  IG   +     ++ E MA G L+S L  +   P 
Sbjct: 100 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 159
Query: 608 ----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGL 660
               L     L      A G  YL    E   IHRD+   N LL       VAK+ DFG+
Sbjct: 160 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 216
Query: 661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL 720
           ++      +            ++ PE F     T K+D +SFGV+L+E+     +  P+ 
Sbjct: 217 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 275
Query: 721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGE 780
            K    + ++     +    K+   P  +             I  +C   + ++RP    
Sbjct: 276 -KSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAI 321
Query: 781 VLWHLEYVLQ 790
           +L  +EY  Q
Sbjct: 322 ILERIEYCTQ 331

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
           L  IK++    +  L   E EI +L K++H ++V+L    +      LV + ++ G L  
Sbjct: 39  LKCIKKSPAFRDSSL---ENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFD 95
Query: 599 HLFGSDL-----PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DEN 650
            +    +       L  +Q L A       + YLH   E GI+HRD+K  N+L    +EN
Sbjct: 96  RILERGVYTEKDASLVIQQVLSA-------VKYLH---ENGIVHRDLKPENLLYLTPEEN 145
Query: 651 FVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
               ++DFGLSK    ME   + +   G+ GY+ PE   ++  ++  D +S GV+ + ++
Sbjct: 146 SKIMITDFGLSK----MEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILL 201
Query: 711 C 711
           C
Sbjct: 202 C 202

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 554 AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQR 613
              E EI  L  LRH H++ L      ++E+I+V EY  N  L  ++   D       +R
Sbjct: 58  GRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARR 116
Query: 614 LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS 673
               I +A  + Y H      I+HRD+K  N+LLDE+   K++DFGLS     M   +  
Sbjct: 117 FFQQIISA--VEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI---MTDGNFL 168
Query: 674 TAVKGSFGYLDPEYF-WRQQLTEKSDVYSFGVVLFEVVCAR 713
               GS  Y  PE    +     + DV+S GV+L+ ++C R
Sbjct: 169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 209

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 51  IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 111 HQLMA--GVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 217
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLAL 240

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 554 AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQR 613
              E EI  L  LRH H++ L      ++E+I+V EY  N  L  ++   D       +R
Sbjct: 59  GRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARR 117
Query: 614 LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS 673
               I +A  + Y H      I+HRD+K  N+LLDE+   K++DFGLS     M   +  
Sbjct: 118 FFQQIISA--VEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI---MTDGNFL 169
Query: 674 TAVKGSFGYLDPEYF-WRQQLTEKSDVYSFGVVLFEVVCAR 713
               GS  Y  PE    +     + DV+S GV+L+ ++C R
Sbjct: 170 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 210

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 52  IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 112 HQLMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 167 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 218
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLAL 241

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 554 AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQR 613
              E EI  L  LRH H++ L      ++E+I+V EY  N  L  ++   D       +R
Sbjct: 53  GRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARR 111
Query: 614 LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS 673
               I +A  + Y H      I+HRD+K  N+LLDE+   K++DFGLS     M   +  
Sbjct: 112 FFQQIISA--VEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI---MTDGNFL 163
Query: 674 TAVKGSFGYLDPEYF-WRQQLTEKSDVYSFGVVLFEVVCAR 713
               GS  Y  PE    +     + DV+S GV+L+ ++C R
Sbjct: 164 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 204

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 554 AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQR 613
              E EI  L  LRH H++ L      ++E+I+V EY  N  L  ++   D       +R
Sbjct: 49  GRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARR 107
Query: 614 LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS 673
               I +A  + Y H      I+HRD+K  N+LLDE+   K++DFGLS     M   +  
Sbjct: 108 FFQQIISA--VEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI---MTDGNFL 159
Query: 674 TAVKGSFGYLDPEYF-WRQQLTEKSDVYSFGVVLFEVVCAR 713
               GS  Y  PE    +     + DV+S GV+L+ ++C R
Sbjct: 160 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 200

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 28/168 (16%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL---RSHLFGSD-----LP 606
           +F+ E+++++ +++ + ++  G     +E+ ++YEYM N ++     + F  D       
Sbjct: 89  DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 607 PLTWKQRLDACI--GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG 664
           P+    ++  CI         Y+H   E+ I HRDVK +NIL+D+N   K+SDFG S   
Sbjct: 149 PI----QVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGES--- 199
Query: 665 PSMEHTHVSTAVKGSFG---YLDPEYFWRQQLTE--KSDVYSFGVVLF 707
                  V   +KGS G   ++ PE+F  +      K D++S G+ L+
Sbjct: 200 ----EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLY 243

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 110/252 (43%), Gaps = 29/252 (11%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM-----ILVYEYMANGTLRSHLFGS 603
           S++ + EF +E   +    H +++ L+G C E +       +++  +M  G L ++L  S
Sbjct: 76  SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYS 135
Query: 604 DLPP----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG 659
            L      +  +  L   +  A G+ YL   + R  +HRD+   N +L ++    ++DFG
Sbjct: 136 RLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFG 192
Query: 660 LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPT 719
           LSK   S ++       K    ++  E    +  T KSDV++FGV ++E+        P 
Sbjct: 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPG 252
Query: 720 LPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPE-SLEKFGEIAEKCLDDEGKNRPTM 778
           +   +  + D+ +   + +               PE  L++  EI   C   +  +RPT 
Sbjct: 253 VQNHE--MYDYLLHGHRLK--------------QPEDCLDELYEIMYSCWRTDPLDRPTF 296
Query: 779 GEVLWHLEYVLQ 790
             +   LE +L+
Sbjct: 297 SVLRLQLEKLLE 308

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL-------FGSDLPPLT 609
           +E++++S L +H ++V+L+G C     ++++ EY   G L + L        G  L P  
Sbjct: 83  SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQ 142
Query: 610 WKQRLDACIG--------------AARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
             + LD   G               A+G+ +L   A +  IHRDV   N+LL    VAK+
Sbjct: 143 DPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKI 199
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
            DFGL++   +  +  V    +    ++ PE  +    T +SDV+S+G++L+E+
Sbjct: 200 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 253

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 51  IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 111 HQLMA--GVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 217
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLAL 240

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 31/247 (12%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQN-EMILVYEYMANGTLRSHLFG--SDLPP------ 607
           +E+++L  +  H ++V+L+G C +    ++++ E+   G L ++L    ++  P      
Sbjct: 81  SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDL 140
Query: 608 ----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT 663
               LT +  +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL++ 
Sbjct: 141 YKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
                        +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P +  D
Sbjct: 198 IXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257
Query: 724 QINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLW 783
           +          +  R LK           +PE  +   +    C   E   RPT  E++ 
Sbjct: 258 E----------EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELVE 303
Query: 784 HLEYVLQ 790
           HL  +LQ
Sbjct: 304 HLGNLLQ 310

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 23/165 (13%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL----FGSDLPPLTW- 610
            E EI +L K++H ++V+L    +  N + LV + ++ G L   +    F ++    T  
Sbjct: 67  IENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLI 126
Query: 611 KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSM 667
           +Q LDA       ++YLH     GI+HRD+K  N+L    DE     +SDFGLSK    M
Sbjct: 127 RQVLDA-------VYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK----M 172
Query: 668 E-HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           E    V +   G+ GY+ PE   ++  ++  D +S GV+ + ++C
Sbjct: 173 EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 217

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 21/182 (11%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG--FCDEQNEMILVYEYMANGT 595
            L A+K+          +F+ EI++L  L    +V   G  +   + E+ LV EY+ +G 
Sbjct: 37  ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGC 96
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHY---LHTGAE----RGIIHRDVKTTNILLD 648
           LR  L           QR  A + A+R L Y   +  G E    R  +HRD+   NIL++
Sbjct: 97  LRDFL-----------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE 145
Query: 649 ENFVAKMSDFGLSKTGP-SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
                K++DFGL+K  P   +   V    +    +  PE       + +SDV+SFGVVL+
Sbjct: 146 SEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 205
Query: 708 EV 709
           E+
Sbjct: 206 EL 207

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------------FGSD 604
           +E++++S L +H ++V+L+G C     ++++ EY   G L + L            F   
Sbjct: 98  SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 605 LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG 664
              L+ +  L      A+G+ +L   A +  IHRDV   N+LL    VAK+ DFGL++  
Sbjct: 158 NSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 214
Query: 665 PSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
            +  +  V    +    ++ PE  +    T +SDV+S+G++L+E+
Sbjct: 215 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 84/156 (53%), Gaps = 7/156 (4%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA 616
           + E ++L ++ H  +V L      + ++ L+ +++  G L + L    +   T +     
Sbjct: 74  KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFY 131
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
               A  L +LH+    GII+RD+K  NILLDE    K++DFGLSK   S++H   + + 
Sbjct: 132 LAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSF 186
Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
            G+  Y+ PE   R+  T+ +D +SFGV++FE++  
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 18/167 (10%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTW------ 610
           +E++++S L +H ++V+L+G C     ++++ EY   G L + L     P L +      
Sbjct: 98  SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSH 157
Query: 611 --------KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK 662
                   +  L      A+G+ +L   A +  IHRDV   N+LL    VAK+ DFGL++
Sbjct: 158 NPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 214
Query: 663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              +  +  V    +    ++ PE  +    T +SDV+S+G++L+E+
Sbjct: 215 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 261

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 111 HQLMA--GVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 217
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLAL 240

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 111 HQLMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 217
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLAL 240

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI + + L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 52  IKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 112 HQLMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 218
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLAL 241

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 538 TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  A+K  N   S +   EF  E  ++      H+V L+G   +    ++V E MA+G L
Sbjct: 49  TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 108
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L             PP T ++ +      A G+ YL+    +  +HR++   N ++ 
Sbjct: 109 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVA 165
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKG--SFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
            +F  K+ DFG+++     E  +     KG     ++ PE       T  SD++SFGVVL
Sbjct: 166 HDFTVKIGDFGMTRD--IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 223
Query: 707 FEV 709
           +E+
Sbjct: 224 WEI 226

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 22/186 (11%)
Query: 538 TLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  AIK  N   S +   EF  E  ++ +    H+V L+G   +    +++ E M  G L
Sbjct: 50  TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 109
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L            L P +  + +      A G+ YL+       +HRD+   N ++ 
Sbjct: 110 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVA 166
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG-----YLDPEYFWRQQLTEKSDVYSFG 703
           E+F  K+ DFG+++     +        KG  G     ++ PE       T  SDV+SFG
Sbjct: 167 EDFTVKIGDFGMTR-----DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 221
Query: 704 VVLFEV 709
           VVL+E+
Sbjct: 222 VVLWEI 227

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 24/228 (10%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA 616
           + EI +LS+    ++    G   +  ++ ++ EY+  G+    L   +  PL   Q    
Sbjct: 73  QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATI 129
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
                +GL YLH+  +   IHRD+K  N+LL E+   K++DFG++  G   +        
Sbjct: 130 LREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTF 184
Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK 736
            G+  ++ PE   +     K+D++S G+   E+           P  +++         K
Sbjct: 185 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP------PHSELHPMKVLFLIPK 238
Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                    P L+GNYS    +   E  E CL+ E   RPT  E+L H
Sbjct: 239 NNP------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLKH 276

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 22/186 (11%)
Query: 538 TLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  AIK  N   S +   EF  E  ++ +    H+V L+G   +    +++ E M  G L
Sbjct: 41  TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 100
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L            L P +  + +      A G+ YL+       +HRD+   N ++ 
Sbjct: 101 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVA 157
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG-----YLDPEYFWRQQLTEKSDVYSFG 703
           E+F  K+ DFG+++     +        KG  G     ++ PE       T  SDV+SFG
Sbjct: 158 EDFTVKIGDFGMTR-----DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 212
Query: 704 VVLFEV 709
           VVL+E+
Sbjct: 213 VVLWEI 218

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 13/165 (7%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA 616
           + E ++L ++ H  +V L      + ++ L+ +++  G L + L  S     T +     
Sbjct: 75  KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFY 132
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
               A  L +LH+    GII+RD+K  NILLDE    K++DFGLSK   S++H   + + 
Sbjct: 133 LAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSF 187
Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP 721
            G+  Y+ PE   R+  T+ +D +SFGV++FE++        TLP
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG------TLP 226

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 13/165 (7%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA 616
           + E ++L ++ H  +V L      + ++ L+ +++  G L + L  S     T +     
Sbjct: 74  KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFY 131
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
               A  L +LH+    GII+RD+K  NILLDE    K++DFGLSK   S++H   + + 
Sbjct: 132 LAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSF 186
Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP 721
            G+  Y+ PE   R+  T+ +D +SFGV++FE++        TLP
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG------TLP 225

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 538 TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  A+K  N   S +   EF  E  ++      H+V L+G   +    ++V E MA+G L
Sbjct: 48  TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 107
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L             PP T ++ +      A G+ YL+    +  +HR++   N ++ 
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVA 164
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKG--SFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
            +F  K+ DFG+++     E  +     KG     ++ PE       T  SD++SFGVVL
Sbjct: 165 HDFTVKIGDFGMTRD--IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
Query: 707 FEV 709
           +E+
Sbjct: 223 WEI 225

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 111 HQLMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 217
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLAL 240

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 52  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 112 HQLMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 218
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLAL 241

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 29/245 (11%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQN-EMILVYEYMANGTLRSHLFG--SDLPP------ 607
           +E+++L  +  H ++V+L+G C +    ++++ E+   G L ++L    ++  P      
Sbjct: 79  SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK 138
Query: 608 --LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP 665
             LT +  +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL++   
Sbjct: 139 DFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIY 195
Query: 666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
                      +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P +  D+ 
Sbjct: 196 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 254
Query: 726 NLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL 785
                    +  R LK           +PE  +   +    C   E   RPT  E++ HL
Sbjct: 255 ---------EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 301
Query: 786 EYVLQ 790
             +LQ
Sbjct: 302 GNLLQ 306

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 16/183 (8%)
Query: 538 TLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  AIK  N   S +   EF  E  ++ +    H+V L+G   +    +++ E M  G L
Sbjct: 46  TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 105
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L            L P +  + +      A G+ YL+       +HRD+   N ++ 
Sbjct: 106 KSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVA 162
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKG--SFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
           E+F  K+ DFG+++     E  +     KG     ++ PE       T  SDV+SFGVVL
Sbjct: 163 EDFTVKIGDFGMTRD--IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 220
Query: 707 FEV 709
           +E+
Sbjct: 221 WEI 223

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 16/183 (8%)
Query: 538 TLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  AIK  N   S +   EF  E  ++ +    H+V L+G   +    +++ E M  G L
Sbjct: 49  TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 108
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L            L P +  + +      A G+ YL+       +HRD+   N ++ 
Sbjct: 109 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVA 165
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKG--SFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
           E+F  K+ DFG+++     E  +     KG     ++ PE       T  SDV+SFGVVL
Sbjct: 166 EDFTVKIGDFGMTRD--IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 223
Query: 707 FEV 709
           +E+
Sbjct: 224 WEI 226

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 52  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 112 HQLMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 218
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLAL 241

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 52  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 112 HQLMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 218
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLAL 241

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 84/156 (53%), Gaps = 7/156 (4%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA 616
           + E ++L+ + H  +V L      + ++ L+ +++  G L + L  S     T +     
Sbjct: 78  KMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFY 135
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
               A GL +LH+    GII+RD+K  NILLDE    K++DFGLSK   +++H   + + 
Sbjct: 136 LAELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE--AIDHEKKAYSF 190
Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
            G+  Y+ PE   RQ  +  +D +S+GV++FE++  
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 52  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 112 HQLMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 218
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLAL 241

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 16/183 (8%)
Query: 538 TLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  AIK  N   S +   EF  E  ++ +    H+V L+G   +    +++ E M  G L
Sbjct: 50  TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 109
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L            L P +  + +      A G+ YL+       +HRD+   N ++ 
Sbjct: 110 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVA 166
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKG--SFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
           E+F  K+ DFG+++     E  +     KG     ++ PE       T  SDV+SFGVVL
Sbjct: 167 EDFTVKIGDFGMTRD--IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 224
Query: 707 FEV 709
           +E+
Sbjct: 225 WEI 227

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 16/183 (8%)
Query: 538 TLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  AIK  N   S +   EF  E  ++ +    H+V L+G   +    +++ E M  G L
Sbjct: 47  TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 106
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L            L P +  + +      A G+ YL+       +HRD+   N ++ 
Sbjct: 107 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVA 163
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKG--SFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
           E+F  K+ DFG+++     E  +     KG     ++ PE       T  SDV+SFGVVL
Sbjct: 164 EDFTVKIGDFGMTRD--IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 221
Query: 707 FEV 709
           +E+
Sbjct: 222 WEI 224

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 111 HQLMA--GVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSXQEY 217
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLAL 240

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 16/183 (8%)
Query: 538 TLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  AIK  N   S +   EF  E  ++ +    H+V L+G   +    +++ E M  G L
Sbjct: 43  TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 102
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L            L P +  + +      A G+ YL+       +HRD+   N ++ 
Sbjct: 103 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVA 159
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKG--SFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
           E+F  K+ DFG+++     E  +     KG     ++ PE       T  SDV+SFGVVL
Sbjct: 160 EDFTVKIGDFGMTRD--IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 217
Query: 707 FEV 709
           +E+
Sbjct: 218 WEI 220

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 16/183 (8%)
Query: 538 TLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  AIK  N   S +   EF  E  ++ +    H+V L+G   +    +++ E M  G L
Sbjct: 78  TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 137
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L            L P +  + +      A G+ YL+       +HRD+   N ++ 
Sbjct: 138 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVA 194
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKG--SFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
           E+F  K+ DFG+++     E  +     KG     ++ PE       T  SDV+SFGVVL
Sbjct: 195 EDFTVKIGDFGMTRD--IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 252
Query: 707 FEV 709
           +E+
Sbjct: 253 WEI 255

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 32/248 (12%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQN-EMILVYEYMANGTLRSHLFG--SDLPP------ 607
           +E+++L  +  H ++V+L+G C +    ++++ E+   G L ++L    ++  P      
Sbjct: 80  SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPED 139
Query: 608 -----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK 662
                LT +  +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL++
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPK 722
                         +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P +  
Sbjct: 197 DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
Query: 723 DQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
           D+          +  R LK           +PE  +   +    C   E   RPT  E++
Sbjct: 257 DE----------EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELV 302
Query: 783 WHLEYVLQ 790
            HL  +LQ
Sbjct: 303 EHLGNLLQ 310

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 33/249 (13%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQN-EMILVYEYMANGTLRSHLFG--SDLPP------ 607
           +E+++L  +  H ++V+L+G C +    ++++ E+   G L ++L    ++  P      
Sbjct: 70  SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 608 ------LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS 661
                 LT +  +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL+
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 186
Query: 662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP 721
           +              +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P + 
Sbjct: 187 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 246
Query: 722 KDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEV 781
            D+          +  R LK           +PE  +   +    C   E   RPT  E+
Sbjct: 247 IDE----------EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSEL 292
Query: 782 LWHLEYVLQ 790
           + HL  +LQ
Sbjct: 293 VEHLGNLLQ 301

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 111 HQLMA--GVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 217
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLAL 240

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 16/183 (8%)
Query: 538 TLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  AIK  N   S +   EF  E  ++ +    H+V L+G   +    +++ E M  G L
Sbjct: 56  TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 115
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L            L P +  + +      A G+ YL+       +HRD+   N ++ 
Sbjct: 116 KSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVA 172
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKG--SFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
           E+F  K+ DFG+++     E  +     KG     ++ PE       T  SDV+SFGVVL
Sbjct: 173 EDFTVKIGDFGMTRD--IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 230
Query: 707 FEV 709
           +E+
Sbjct: 231 WEI 233

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 16/183 (8%)
Query: 538 TLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  AIK  N   S +   EF  E  ++ +    H+V L+G   +    +++ E M  G L
Sbjct: 56  TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 115
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L            L P +  + +      A G+ YL+       +HRD+   N ++ 
Sbjct: 116 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVA 172
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKG--SFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
           E+F  K+ DFG+++     E  +     KG     ++ PE       T  SDV+SFGVVL
Sbjct: 173 EDFTVKIGDFGMTRD--IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 230
Query: 707 FEV 709
           +E+
Sbjct: 231 WEI 233

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 111 HQLMA--GVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 217
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLAL 240

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 111 HQLMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 217
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLAL 240

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 16/183 (8%)
Query: 538 TLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  AIK  N   S +   EF  E  ++ +    H+V L+G   +    +++ E M  G L
Sbjct: 49  TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 108
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L            L P +  + +      A G+ YL+       +HRD+   N ++ 
Sbjct: 109 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVA 165
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKG--SFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
           E+F  K+ DFG+++     E  +     KG     ++ PE       T  SDV+SFGVVL
Sbjct: 166 EDFTVKIGDFGMTRD--IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 223
Query: 707 FEV 709
           +E+
Sbjct: 224 WEI 226

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 50  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 109
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 110 HQLMA--GVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 164
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 165 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 216
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 217 SDWKEKKTYLNPWKKIDSAPLAL 239

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 111 HQLMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 217
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLAL 240

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 10/151 (6%)
Query: 562 MLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA 621
           MLS + H  ++ + G   +  ++ ++ +Y+  G L S L  S   P    +   A +  A
Sbjct: 59  MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA 118
Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG 681
             L YLH+   + II+RD+K  NILLD+N   K++DFG +K  P      V+  + G+  
Sbjct: 119 --LEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPD 168
Query: 682 YLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           Y+ PE    +   +  D +SFG++++E++  
Sbjct: 169 YIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 111 HQLMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 217
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLAL 240

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 111 HQLMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 217
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLAL 240

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 52  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 112 HQLMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 218
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLAL 241

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 24/228 (10%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA 616
           + EI +LS+    ++    G   +  ++ ++ EY+  G+    L   +  PL   Q    
Sbjct: 53  QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATI 109
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
                +GL YLH+  +   IHRD+K  N+LL E+   K++DFG++  G   +        
Sbjct: 110 LREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTF 164
Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK 736
            G+  ++ PE   +     K+D++S G+   E+           P  +++         K
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP------PHSELHPMKVLFLIPK 218
Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                    P L+GNYS    +   E  E CL+ E   RPT  E+L H
Sbjct: 219 NNP------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLKH 256

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 33/249 (13%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQN-EMILVYEYMANGTLRSHLFG--SDLPP------ 607
           +E+++L  +  H ++V+L+G C +    ++++ E+   G L ++L    ++  P      
Sbjct: 70  SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 608 ------LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS 661
                 LT +  +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL+
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 186
Query: 662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP 721
           +              +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P + 
Sbjct: 187 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 246
Query: 722 KDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEV 781
            D+          +  R LK           +PE  +   +    C   E   RPT  E+
Sbjct: 247 IDE----------EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSEL 292
Query: 782 LWHLEYVLQ 790
           + HL  +LQ
Sbjct: 293 VEHLGNLLQ 301

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
            + EI +   L H ++V   G   E N   L  EY + G L   +      P    QR  
Sbjct: 52  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             + A  G+ YLH     GI HRD+K  N+LLDE    K+SDFGL+          +   
Sbjct: 112 HQLMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 676 VKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           + G+  Y+ PE   R++   E  DV+S G+VL       A++   LP DQ   +D   ++
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQP--SDSCQEY 218
Query: 735 QKQRSLKSIIDPHLKGNYSPESL 757
              +  K+ ++P  K + +P +L
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLAL 241

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 33/249 (13%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQN-EMILVYEYMANGTLRSHLFG--SDLPP------ 607
           +E+++L  +  H ++V+L+G C +    ++++ E+   G L ++L    ++  P      
Sbjct: 79  SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 138
Query: 608 ------LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS 661
                 LT +  +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL+
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
Query: 662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP 721
           +              +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P + 
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255
Query: 722 KDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEV 781
            D+          +  R LK           +PE  +   +    C   E   RPT  E+
Sbjct: 256 IDE----------EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSEL 301
Query: 782 LWHLEYVLQ 790
           + HL  +LQ
Sbjct: 302 VEHLGNLLQ 310

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 540 AAIKRANPQSEQGL---AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
            A+K  N Q  + L    +   EI+ L   RH H++ L       +++ +V EY++ G L
Sbjct: 44  VAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGEL 103
Query: 597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMS 656
             ++  +        +RL   I +  G+ Y H      ++HRD+K  N+LLD +  AK++
Sbjct: 104 FDYICKNGRLDEKESRRLFQQILS--GVDYCHRHM---VVHRDLKPENVLLDAHMNAKIA 158
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF-WRQQLTEKSDVYSFGVVLFEVVCARAV 715
           DFGLS      E    S    GS  Y  PE    R     + D++S GV+L+ ++C    
Sbjct: 159 DFGLSNMMSDGEFLRXSC---GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCG--- 212
Query: 716 INPTLPKD 723
              TLP D
Sbjct: 213 ---TLPFD 217

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   EIE+ S LRH +++ +  +  ++  + L+ E+   G L   L            R 
Sbjct: 61  QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--------QKHGRF 112
Query: 615 DACIGA------ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
           D    A      A  LHY H   ER +IHRD+K  N+L+      K++DFG S   PS+ 
Sbjct: 113 DEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 169
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
              +     G+  YL PE    +   EK D++  GV+ +E +  
Sbjct: 170 RRXMC----GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 24/228 (10%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA 616
           + EI +LS+    ++    G   +  ++ ++ EY+  G+    L   +  PL   Q    
Sbjct: 53  QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATI 109
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
                +GL YLH+  +   IHRD+K  N+LL E+   K++DFG++  G   +        
Sbjct: 110 LREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXF 164
Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK 736
            G+  ++ PE   +     K+D++S G+   E+           P  +++         K
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP------PHSELHPMKVLFLIPK 218
Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                    P L+GNYS    +   E  E CL+ E   RPT  E+L H
Sbjct: 219 NNP------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLKH 256

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 50/231 (21%), Positives = 100/231 (43%), Gaps = 27/231 (11%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           E   E+ +L+ ++H ++V      +E   + +V +Y   G L   +           Q L
Sbjct: 69  ESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQIL 128
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
           D  +     L ++H   +R I+HRD+K+ NI L ++   ++ DFG+++   S     ++ 
Sbjct: 129 DWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST--VELAR 183
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
           A  G+  YL PE    +    KSD+++ G VL+E+   +                     
Sbjct: 184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG--------------- 228
Query: 735 QKQRSLKSIIDPHLKGNYSPESLE---KFGEIAEKCLDDEGKNRPTMGEVL 782
               S+K+++   + G++ P SL        +  +      ++RP++  +L
Sbjct: 229 ----SMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSIL 275

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGS--DLPPLTWKQ 612
           E   E +++ +L + ++V LIG C +   ++LV E    G L   L G   ++P     +
Sbjct: 382 EMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAE 440
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTH 671
            L      + G+ YL    E+  +HR++   N+LL     AK+SDFGLSK  G    +  
Sbjct: 441 LLHQ---VSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494
Query: 672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             +A K    +  PE    ++ + +SDV+S+GV ++E +
Sbjct: 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL 533

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   EIE+ S LRH +++ +  +  ++  + L+ E+   G L   L            R 
Sbjct: 60  QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG--------RF 111
Query: 615 DACIGA------ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
           D    A      A  LHY H   ER +IHRD+K  N+L+      K++DFG S   PS+ 
Sbjct: 112 DEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
              +     G+  YL PE    +   EK D++  GV+ +E +  
Sbjct: 169 RRXMC----GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 49  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 101
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 102 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 158
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 159 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 218
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +   +Q  L  II+
Sbjct: 219 MLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIIN 255

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 24/228 (10%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA 616
           + EI +LS+    ++    G   +  ++ ++ EY+  G+    L   +  PL   Q    
Sbjct: 68  QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATI 124
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
                +GL YLH+  +   IHRD+K  N+LL E+   K++DFG++  G   +        
Sbjct: 125 LREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXF 179
Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK 736
            G+  ++ PE   +     K+D++S G+   E+           P  +++         K
Sbjct: 180 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP------PHSELHPMKVLFLIPK 233
Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                    P L+GNYS    +   E  E CL+ E   RPT  E+L H
Sbjct: 234 NNP------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLKH 271

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 19/181 (10%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG--FCDEQNEMILVYEYMANGT 595
            L A+K+          +F+ EI++L  L    +V   G  +   +  + LV EY+ +G 
Sbjct: 40  ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 99
Query: 596 LRSHLFGSDLPPLTWKQRLDAC------IGAARGLHYLHTGAERGIIHRDVKTTNILLDE 649
           LR  L          + RLDA           +G+ YL     R  +HRD+   NIL++ 
Sbjct: 100 LRDFL-------QRHRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVES 149
Query: 650 NFVAKMSDFGLSKTGP-SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
               K++DFGL+K  P   ++  V    +    +  PE       + +SDV+SFGVVL+E
Sbjct: 150 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 209
Query: 709 V 709
           +
Sbjct: 210 L 210

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 33/249 (13%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQN-EMILVYEYMANGTLRSHLFG--SDLPP------ 607
           +E+++L  +  H ++V+L+G C +    ++++ E+   G L ++L    ++  P      
Sbjct: 116 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 175
Query: 608 ------LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS 661
                 LT +  +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL+
Sbjct: 176 DLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 232
Query: 662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP 721
           +              +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P + 
Sbjct: 233 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 292
Query: 722 KDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEV 781
            D+          +  R LK           +PE  +   +    C   E   RPT  E+
Sbjct: 293 IDE----------EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSEL 338
Query: 782 LWHLEYVLQ 790
           + HL  +LQ
Sbjct: 339 VEHLGNLLQ 347

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 19/181 (10%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG--FCDEQNEMILVYEYMANGT 595
            L A+K+          +F+ EI++L  L    +V   G  +   +  + LV EY+ +G 
Sbjct: 41  ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 100
Query: 596 LRSHLFGSDLPPLTWKQRLDAC------IGAARGLHYLHTGAERGIIHRDVKTTNILLDE 649
           LR  L          + RLDA           +G+ YL     R  +HRD+   NIL++ 
Sbjct: 101 LRDFL-------QRHRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVES 150
Query: 650 NFVAKMSDFGLSKTGP-SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
               K++DFGL+K  P   ++  V    +    +  PE       + +SDV+SFGVVL+E
Sbjct: 151 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 210
Query: 709 V 709
           +
Sbjct: 211 L 211

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 18/188 (9%)
Query: 540 AAIKRANPQSEQGL---AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
            A+K  N Q  + L    + + EI+ L   RH H++ L        +  +V EY++ G L
Sbjct: 39  VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMS 656
             ++           +RL   I +A  + Y H      ++HRD+K  N+LLD +  AK++
Sbjct: 99  FDYICKHGRVEEMEARRLFQQILSA--VDYCH---RHMVVHRDLKPENVLLDAHMNAKIA 153
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF-WRQQLTEKSDVYSFGVVLFEVVCARAV 715
           DFGLS      E    S    GS  Y  PE    R     + D++S GV+L+ ++C    
Sbjct: 154 DFGLSNMMSDGEFLRTSC---GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG--- 207
Query: 716 INPTLPKD 723
              TLP D
Sbjct: 208 ---TLPFD 212

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 53  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 105
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 106 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 162
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 163 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 222
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 223 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 259

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 59  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 111
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 112 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 168
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 169 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 228
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 229 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 265

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 51  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 103
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 104 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 160
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 161 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 221 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 257

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 33/249 (13%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQN-EMILVYEYMANGTLRSHLFG--SDLPP------ 607
           +E+++L  +  H ++V+L+G C +    ++++ E+   G L ++L    ++  P      
Sbjct: 79  SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 138
Query: 608 ------LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS 661
                 LT +  +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL+
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
Query: 662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP 721
           +              +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P + 
Sbjct: 196 RDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255
Query: 722 KDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEV 781
            D+          +  R LK           +PE  +   +    C   E   RPT  E+
Sbjct: 256 IDE----------EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSEL 301
Query: 782 LWHLEYVLQ 790
           + HL  +LQ
Sbjct: 302 VEHLGNLLQ 310

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 56  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 108
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 109 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 165
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 166 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 225
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 226 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 262

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 57  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 109
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 110 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 166
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 167 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 226
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 227 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 263

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 48  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 100
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 101 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 157
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 158 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 217
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 218 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 254

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 55  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 107
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 108 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 164
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 225 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 19/181 (10%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG--FCDEQNEMILVYEYMANGT 595
            L A+K+          +F+ EI++L  L    +V   G  +   +  + LV EY+ +G 
Sbjct: 53  ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 112
Query: 596 LRSHLFGSDLPPLTWKQRLDAC------IGAARGLHYLHTGAERGIIHRDVKTTNILLDE 649
           LR  L          + RLDA           +G+ YL     R  +HRD+   NIL++ 
Sbjct: 113 LRDFL-------QRHRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVES 162
Query: 650 NFVAKMSDFGLSKTGP-SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
               K++DFGL+K  P   ++  V    +    +  PE       + +SDV+SFGVVL+E
Sbjct: 163 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 222
Query: 709 V 709
           +
Sbjct: 223 L 223

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 33/249 (13%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQN-EMILVYEYMANGTLRSHLFG--SDLPP------ 607
           +E+++L  +  H ++V+L+G C +    ++++ E+   G L ++L    ++  P      
Sbjct: 81  SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPE 140
Query: 608 ------LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS 661
                 LT +  +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL+
Sbjct: 141 DLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 197
Query: 662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP 721
           +              +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P + 
Sbjct: 198 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 257
Query: 722 KDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEV 781
            D+          +  R LK           +PE  +   +    C   E   RPT  E+
Sbjct: 258 IDE----------EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSEL 303
Query: 782 LWHLEYVLQ 790
           + HL  +LQ
Sbjct: 304 VEHLGNLLQ 312

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 49  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 101
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 102 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 158
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 159 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 218
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 219 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 255

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 51  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 103
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 104 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 160
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 161 XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 221 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 257

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 55  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 107
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 108 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 164
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 165 XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 225 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 51  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 103
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 104 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 160
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 161 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 221 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 257

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 540 AAIKRA-NPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
            AIK   N  S+    +F  E   + +  H H+V LIG   E N + ++ E    G LRS
Sbjct: 41  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 99
Query: 599 HL----FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAK 654
            L    F  DL  L     +      +  L YL +   +  +HRD+   N+L+  N   K
Sbjct: 100 FLQVRKFSLDLASL-----ILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVK 151
Query: 655 MSDFGLSKTGPSMEHTHVSTAVKGSF--GYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           + DFGLS+    ME +    A KG     ++ PE    ++ T  SDV+ FGV ++E++
Sbjct: 152 LGDFGLSRY---MEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 16/179 (8%)
Query: 539 LAAIKRANPQSEQGL-AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           L AIK    ++ +G     E EI +L K++H ++V+L    +    + L+ + ++ G L 
Sbjct: 45  LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL---LDENFVAK 654
             +            RL         + YLH   + GI+HRD+K  N+L   LDE+    
Sbjct: 105 DRIVEKGFYTERDASRL--IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 655 MSDFGLSKTGPSMEH--THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           +SDFGLSK    ME   + +STA  G+ GY+ PE   ++  ++  D +S GV+ + ++C
Sbjct: 160 ISDFGLSK----MEDPGSVLSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 33/249 (13%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQN-EMILVYEYMANGTLRSHLFG--SDLPP------ 607
           +E+++L  +  H ++V+L+G C +    ++++ E+   G L ++L    ++  P      
Sbjct: 70  SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 608 ------LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS 661
                 LT +  +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL+
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 186
Query: 662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP 721
           +              +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P + 
Sbjct: 187 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 246
Query: 722 KDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEV 781
            D+          +  R LK           +PE  +   +    C   E   RPT  E+
Sbjct: 247 IDE----------EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSEL 292
Query: 782 LWHLEYVLQ 790
           + HL  +LQ
Sbjct: 293 VEHLGNLLQ 301

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 86/166 (51%), Gaps = 18/166 (10%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTL------RSHLFGSDLPPL-- 608
           +E++++S L +H ++V+L+G C     ++++ EY   G L      +S +  +D P    
Sbjct: 98  SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD-PAFAI 156
Query: 609 -----TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT 663
                + +  L      A+G+ +L   A +  IHRDV   N+LL    VAK+ DFGL++ 
Sbjct: 157 ANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
             +  +  V    +    ++ PE  +    T +SDV+S+G++L+E+
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 71  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 123
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 124 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 180
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 181 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 240
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 241 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 16/183 (8%)
Query: 538 TLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  AIK  N   S +   EF  E  ++ +    H+V L+G   +    +++ E M  G L
Sbjct: 43  TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 102
Query: 597 RSHLFG--------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           +S+L            L P +  + +      A G+ YL+       +HRD+   N  + 
Sbjct: 103 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVA 159
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKG--SFGYLDPEYFWRQQLTEKSDVYSFGVVL 706
           E+F  K+ DFG+++     E  +     KG     ++ PE       T  SDV+SFGVVL
Sbjct: 160 EDFTVKIGDFGMTRD--IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 217
Query: 707 FEV 709
           +E+
Sbjct: 218 WEI 220

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 33/249 (13%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQN-EMILVYEYMANGTLRSHLFG--SDLPP------ 607
           +E+++L  +  H ++V+L+G C +    ++++ E+   G L ++L    ++  P      
Sbjct: 70  SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 608 ------LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS 661
                 LT +  +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL+
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 186
Query: 662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP 721
           +              +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P + 
Sbjct: 187 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 246
Query: 722 KDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEV 781
            D+          +  R LK           +PE  +   +    C   E   RPT  E+
Sbjct: 247 IDE----------EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSEL 292
Query: 782 LWHLEYVLQ 790
           + HL  +LQ
Sbjct: 293 VEHLGNLLQ 301

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 33/249 (13%)
Query: 558 TEIEMLSKL-RHRHLVSLIGFCDEQN-EMILVYEYMANGTLRSHLFG--SDLPP------ 607
           +E+++L  +  H ++V+L+G C +    ++++ E+   G L ++L    ++  P      
Sbjct: 79  SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 138
Query: 608 ------LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS 661
                 LT +  +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL+
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
Query: 662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP 721
           +              +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P + 
Sbjct: 196 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255
Query: 722 KDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEV 781
            D+          +  R LK           +PE  +   +    C   E   RPT  E+
Sbjct: 256 IDE----------EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSEL 301
Query: 782 LWHLEYVLQ 790
           + HL  +LQ
Sbjct: 302 VEHLGNLLQ 310

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 51  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 103
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 104 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 160
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 161 XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 221 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIIN 257

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 16/180 (8%)
Query: 539 LAAIKRANPQSEQGL-AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           L AIK    ++ +G     E EI +L K++H ++V+L    +    + L+ + ++ G L 
Sbjct: 45  LVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL---LDENFVAK 654
             +            RL         + YLH   + GI+HRD+K  N+L   LDE+    
Sbjct: 105 DRIVEKGFYTERDASRL--IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 655 MSDFGLSKTGPSMEH--THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           +SDFGLSK    ME   + +STA  G+ GY+ PE   ++  ++  D +S GV+ + ++C 
Sbjct: 160 ISDFGLSK----MEDPGSVLSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 16/179 (8%)
Query: 539 LAAIKRANPQSEQGL-AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           L AIK    ++ +G     E EI +L K++H ++V+L    +    + L+ + ++ G L 
Sbjct: 45  LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL---LDENFVAK 654
             +            RL         + YLH   + GI+HRD+K  N+L   LDE+    
Sbjct: 105 DRIVEKGFYTERDASRL--IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 655 MSDFGLSKTGPSMEH--THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           +SDFGLSK    ME   + +STA  G+ GY+ PE   ++  ++  D +S GV+ + ++C
Sbjct: 160 ISDFGLSK----MEDPGSVLSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 51  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 103
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 104 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 160
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 161 XDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 221 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIIN 257

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 16/180 (8%)
Query: 539 LAAIKRANPQSEQGL-AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           L AIK    ++ +G     E EI +L K++H ++V+L    +    + L+ + ++ G L 
Sbjct: 45  LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL---LDENFVAK 654
             +            RL         + YLH   + GI+HRD+K  N+L   LDE+    
Sbjct: 105 DRIVEKGFYTERDASRL--IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 655 MSDFGLSKTGPSMEH--THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           +SDFGLSK    ME   + +STA  G+ GY+ PE   ++  ++  D +S GV+ + ++C 
Sbjct: 160 ISDFGLSK----MEDPGSVLSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 568 HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYL 627
           H  LV L      ++ +  V EY+  G L  H+      P    +   A I  A  L+YL
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYL 169
Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY 687
           H   ERGII+RD+K  N+LLD     K++D+G+ K G  +     ++   G+  Y+ PE 
Sbjct: 170 H---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSTFCGTPNYIAPEI 224
Query: 688 FWRQQLTEKSDVYSFGVVLFEVVCARA 714
              +      D ++ GV++FE++  R+
Sbjct: 225 LRGEDYGFSVDWWALGVLMFEMMAGRS 251

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 55  VAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 107
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 108 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 164
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 165 XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 225 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 55  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 107
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 108 VQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 164
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 225 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 568 HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYL 627
           H  LV L      ++ +  V EY+  G L  H+      P    +   A I  A  L+YL
Sbjct: 80  HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYL 137
Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY 687
           H   ERGII+RD+K  N+LLD     K++D+G+ K G  +     ++   G+  Y+ PE 
Sbjct: 138 H---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSXFCGTPNYIAPEI 192
Query: 688 FWRQQLTEKSDVYSFGVVLFEVVCARA 714
              +      D ++ GV++FE++  R+
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGRS 219

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AI++ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 55  VAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 107
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 108 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 164
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 225 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 568 HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYL 627
           H  LV L      ++ +  V EY+  G L  H+      P    +   A I  A  L+YL
Sbjct: 69  HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYL 126
Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY 687
           H   ERGII+RD+K  N+LLD     K++D+G+ K G  +     ++   G+  Y+ PE 
Sbjct: 127 H---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSXFCGTPNYIAPEI 181
Query: 688 FWRQQLTEKSDVYSFGVVLFEVVCARA 714
              +      D ++ GV++FE++  R+
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGRS 208

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 538 TLAAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           T  AIK+ +P   Q   +    EI++L + RH    ++IG  D      L  E M +  +
Sbjct: 69  TRVAIKKISPFEHQTYCQRTLREIQILLRFRHE---NVIGIRDILRASTL--EAMRDVYI 123
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q+L     C       RGL Y+H+     ++HRD+K +N+L++  
Sbjct: 124 VQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLINTT 180
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 181 CDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 240
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 241 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 18/188 (9%)
Query: 540 AAIKRANPQSEQGL---AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
            A+K  N Q  + L    + + EI+ L   RH H++ L        +  +V EY++ G L
Sbjct: 39  VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMS 656
             ++           +RL   I +A  + Y H      ++HRD+K  N+LLD +  AK++
Sbjct: 99  FDYICKHGRVEEMEARRLFQQILSA--VDYCH---RHMVVHRDLKPENVLLDAHMNAKIA 153
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF-WRQQLTEKSDVYSFGVVLFEVVCARAV 715
           DFGLS      E    S    GS  Y  PE    R     + D++S GV+L+ ++C    
Sbjct: 154 DFGLSNMMSDGEFLRDSC---GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG--- 207
Query: 716 INPTLPKD 723
              TLP D
Sbjct: 208 ---TLPFD 212

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 568 HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYL 627
           H  LV L      ++ +  V EY+  G L  H+      P    +   A I  A  L+YL
Sbjct: 65  HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYL 122
Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY 687
           H   ERGII+RD+K  N+LLD     K++D+G+ K G  +     ++   G+  Y+ PE 
Sbjct: 123 H---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSXFCGTPNYIAPEI 177
Query: 688 FWRQQLTEKSDVYSFGVVLFEVVCARA 714
              +      D ++ GV++FE++  R+
Sbjct: 178 LRGEDYGFSVDWWALGVLMFEMMAGRS 204

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L   RH +++ +       N++I     E M +  +
Sbjct: 53  VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI-------NDIIRAPTIEQMKDVYI 105
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 106 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 162
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 163 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 222
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 223 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 259

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 563 LSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLF---GSDLPPLTWKQRLDACIG 619
           +  L H H+V L+G C   + + LV +Y+  G+L  H+    G+  P L     L+  + 
Sbjct: 87  IGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLL----LNWGVQ 141
Query: 620 AARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGS 679
            A+G++YL    E G++HR++   N+LL      +++DFG++   P  +   + +  K  
Sbjct: 142 IAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 198
Query: 680 FGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             ++  E     + T +SDV+S+GV ++E++
Sbjct: 199 IKWMALESIHFGKYTHQSDVWSYGVTVWELM 229

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 540 AAIKRA-NPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
            AIK   N  S+    +F  E   + +  H H+V LIG   E N + ++ E    G LRS
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 479
Query: 599 HL----FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAK 654
            L    F  DL  L            +  L YL +   +  +HRD+   N+L+  N   K
Sbjct: 480 FLQVRKFSLDLASLIL-----YAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVK 531
Query: 655 MSDFGLSKTGPSMEHTHVSTAVKGSF--GYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           + DFGLS+    ME +    A KG     ++ PE    ++ T  SDV+ FGV ++E++
Sbjct: 532 LGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 563 LSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLF---GSDLPPLTWKQRLDACIG 619
           +  L H H+V L+G C   + + LV +Y+  G+L  H+    G+  P L     L+  + 
Sbjct: 69  IGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLL----LNWGVQ 123
Query: 620 AARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGS 679
            A+G++YL    E G++HR++   N+LL      +++DFG++   P  +   + +  K  
Sbjct: 124 IAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 180
Query: 680 FGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             ++  E     + T +SDV+S+GV ++E++
Sbjct: 181 IKWMALESIHFGKYTHQSDVWSYGVTVWELM 211

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           E   E  ++ +L + ++V +IG C+ ++ M LV E    G L  +L  +    +  K  +
Sbjct: 58  ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNR--HVKDKNII 114
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH-VS 673
           +     + G+ YL    E   +HRD+   N+LL     AK+SDFGLSK   + E+ +   
Sbjct: 115 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQ 171
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
           T  K    +  PE     + + KSDV+SFGV+++E
Sbjct: 172 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 79/184 (42%), Gaps = 41/184 (22%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEM------ILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           EI+++ KL H ++VS     D   ++      +L  EY   G LR +L            
Sbjct: 63  EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL-----------N 111
Query: 613 RLDACIGAARG------------LHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSD 657
           + + C G   G            L YLH   E  IIHRD+K  NI+L    +  + K+ D
Sbjct: 112 QFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIID 168
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
            G +K    ++   + T   G+  YL PE   +++ T   D +SFG + FE +       
Sbjct: 169 LGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG---FR 222
Query: 718 PTLP 721
           P LP
Sbjct: 223 PFLP 226

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 540 AAIKRA-NPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
            AIK   N  S+    +F  E   + +  H H+V LIG   E N + ++ E    G LRS
Sbjct: 69  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 127
Query: 599 HL----FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAK 654
            L    +  DL  L     +      +  L YL +   +  +HRD+   N+L+  N   K
Sbjct: 128 FLQVRKYSLDLASL-----ILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVK 179
Query: 655 MSDFGLSKTGPSMEHTHVSTAVKGSF--GYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           + DFGLS+    ME +    A KG     ++ PE    ++ T  SDV+ FGV ++E++
Sbjct: 180 LGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 79/184 (42%), Gaps = 41/184 (22%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEM------ILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           EI+++ KL H ++VS     D   ++      +L  EY   G LR +L            
Sbjct: 62  EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL-----------N 110
Query: 613 RLDACIGAARG------------LHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSD 657
           + + C G   G            L YLH   E  IIHRD+K  NI+L    +  + K+ D
Sbjct: 111 QFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIID 167
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVIN 717
            G +K    ++   + T   G+  YL PE   +++ T   D +SFG + FE +       
Sbjct: 168 LGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG---FR 221
Query: 718 PTLP 721
           P LP
Sbjct: 222 PFLP 225

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 540 AAIKRA-NPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
            AIK   N  S+    +F  E   + +  H H+V LIG   E N + ++ E    G LRS
Sbjct: 46  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 104
Query: 599 HL----FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAK 654
            L    +  DL  L     +      +  L YL +   +  +HRD+   N+L+  N   K
Sbjct: 105 FLQVRKYSLDLASL-----ILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVK 156
Query: 655 MSDFGLSKTGPSMEHTHVSTAVKGSF--GYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           + DFGLS+    ME +    A KG     ++ PE    ++ T  SDV+ FGV ++E++
Sbjct: 157 LGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 55  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 107
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 108 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 164
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT        +  Y  PE     +  T+  D++S G +L E
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 225 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L + RH +++ +       N++I     E M +  +
Sbjct: 56  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-------NDIIRAPTIEQMKDVYI 108
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 109 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 165
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT        +  Y  PE     +  T+  D++S G +L E
Sbjct: 166 CDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 225
Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           ++  R +       DQ+N     +    Q  L  II+
Sbjct: 226 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 262

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           E   E  ++ +L + ++V +IG C+ ++ M LV E    G L  +L  +    +  K  +
Sbjct: 58  ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNR--HVKDKNII 114
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH-VS 673
           +     + G+ YL    E   +HRD+   N+LL     AK+SDFGLSK   + E+ +   
Sbjct: 115 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 171
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
           T  K    +  PE     + + KSDV+SFGV+++E
Sbjct: 172 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 540 AAIKRA-NPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
            AIK   N  S+    +F  E   + +  H H+V LIG   E N + ++ E    G LRS
Sbjct: 41  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 99
Query: 599 HL----FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAK 654
            L    +  DL  L     +      +  L YL +   +  +HRD+   N+L+  N   K
Sbjct: 100 FLQVRKYSLDLASL-----ILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVK 151
Query: 655 MSDFGLSKTGPSMEHTHVSTAVKGSF--GYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           + DFGLS+    ME +    A KG     ++ PE    ++ T  SDV+ FGV ++E++
Sbjct: 152 LGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 540 AAIKRA-NPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
            AIK   N  S+    +F  E   + +  H H+V LIG   E N + ++ E    G LRS
Sbjct: 41  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 99
Query: 599 HL----FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAK 654
            L    +  DL  L     +      +  L YL +   +  +HRD+   N+L+  N   K
Sbjct: 100 FLQVRKYSLDLASL-----ILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVK 151
Query: 655 MSDFGLSKTGPSMEHTHVSTAVKGSF--GYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           + DFGLS+    ME +    A KG     ++ PE    ++ T  SDV+ FGV ++E++
Sbjct: 152 LGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           E   E  ++ +L + ++V +IG C+ ++ M LV E    G L  +L  +    +  K  +
Sbjct: 74  ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNR--HVKDKNII 130
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH-VS 673
           +     + G+ YL    E   +HRD+   N+LL     AK+SDFGLSK   + E+ +   
Sbjct: 131 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
           T  K    +  PE     + + KSDV+SFGV+++E
Sbjct: 188 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           E   E  ++ +L + ++V +IG C+ ++ M LV E    G L  +L  +    +  K  +
Sbjct: 74  ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNR--HVKDKNII 130
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH-VS 673
           +     + G+ YL    E   +HRD+   N+LL     AK+SDFGLSK   + E+ +   
Sbjct: 131 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
           T  K    +  PE     + + KSDV+SFGV+++E
Sbjct: 188 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 540 AAIKRA-NPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
            AIK   N  S+    +F  E   + +  H H+V LIG   E N + ++ E    G LRS
Sbjct: 44  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 102
Query: 599 HL----FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAK 654
            L    +  DL  L     +      +  L YL +   +  +HRD+   N+L+  N   K
Sbjct: 103 FLQVRKYSLDLASL-----ILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVK 154
Query: 655 MSDFGLSKTGPSMEHTHVSTAVKGSF--GYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           + DFGLS+    ME +    A KG     ++ PE    ++ T  SDV+ FGV ++E++
Sbjct: 155 LGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 540 AAIKRA-NPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
            AIK   N  S+    +F  E   + +  H H+V LIG   E N + ++ E    G LRS
Sbjct: 43  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 101
Query: 599 HL----FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAK 654
            L    +  DL  L     +      +  L YL +   +  +HRD+   N+L+  N   K
Sbjct: 102 FLQVRKYSLDLASL-----ILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVK 153
Query: 655 MSDFGLSKTGPSMEHTHVSTAVKGSF--GYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           + DFGLS+    ME +    A KG     ++ PE    ++ T  SDV+ FGV ++E++
Sbjct: 154 LGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 540 AAIKRA-NPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
            AIK   N  S+    +F  E   + +  H H+V LIG   E N + ++ E    G LRS
Sbjct: 38  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 96
Query: 599 HL----FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAK 654
            L    +  DL  L     +      +  L YL +   +  +HRD+   N+L+  N   K
Sbjct: 97  FLQVRKYSLDLASL-----ILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVK 148
Query: 655 MSDFGLSKTGPSMEHTHVSTAVKGSF--GYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           + DFGLS+    ME +    A KG     ++ PE    ++ T  SDV+ FGV ++E++
Sbjct: 149 LGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           E   E  ++ +L + ++V +IG C+ ++ M LV E    G L  +L  +    +  K  +
Sbjct: 52  ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNR--HVKDKNII 108
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH-VS 673
           +     + G+ YL    E   +HRD+   N+LL     AK+SDFGLSK   + E+ +   
Sbjct: 109 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 165
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
           T  K    +  PE     + + KSDV+SFGV+++E
Sbjct: 166 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 200

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           E   E  ++ +L + ++V +IG C+ ++ M LV E    G L  +L  +    +  K  +
Sbjct: 54  ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNR--HVKDKNII 110
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH-VS 673
           +     + G+ YL    E   +HRD+   N+LL     AK+SDFGLSK   + E+ +   
Sbjct: 111 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
           T  K    +  PE     + + KSDV+SFGV+++E
Sbjct: 168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 202

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           E   E  ++ +L + ++V +IG C+ ++ M LV E    G L  +L  +    +  K  +
Sbjct: 72  ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNR--HVKDKNII 128
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH-VS 673
           +     + G+ YL    E   +HRD+   N+LL     AK+SDFGLSK   + E+ +   
Sbjct: 129 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 185
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
           T  K    +  PE     + + KSDV+SFGV+++E
Sbjct: 186 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 220

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           E   E  ++ +L + ++V +IG C+ ++ M LV E    G L  +L  +    +  K  +
Sbjct: 64  ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNR--HVKDKNII 120
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH-VS 673
           +     + G+ YL    E   +HRD+   N+LL     AK+SDFGLSK   + E+ +   
Sbjct: 121 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 177
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
           T  K    +  PE     + + KSDV+SFGV+++E
Sbjct: 178 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 212

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 7/156 (4%)
Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           TE  +L   RH  L +L       + +  V EY   G L  HL    +      +   A 
Sbjct: 54  TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           I +A  L YLH+   R +++RD+K  N++LD++   K++DFGL K G S   T  +    
Sbjct: 114 IVSA--LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-- 166
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           G+  YL PE           D +  GVV++E++C R
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 109/259 (42%), Gaps = 35/259 (13%)
Query: 539 LAAIKR---ANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           + AIK+   +  QS +   +   E+  L KLRH + +   G    ++   LV EY     
Sbjct: 81  VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSA 140
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
             S L      PL   +      GA +GL YLH+     +IHRDVK  NILL E  + K+
Sbjct: 141 --SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKL 195
Query: 656 SDFG-LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ---QLTEKSDVYSFGVVLFEVVC 711
            DFG  S   P       +    G+  ++ PE        Q   K DV+S G+   E+  
Sbjct: 196 GDFGSASIMAP-------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL-- 246
Query: 712 ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDE 771
             A   P L       A + +   +  +L+S       G++S    E F    + CL   
Sbjct: 247 --AERKPPLFNMNAMSALYHIAQNESPALQS-------GHWS----EYFRNFVDSCLQKI 293
Query: 772 GKNRPTMGEVLWHLEYVLQ 790
            ++RPT  EVL    +VL+
Sbjct: 294 PQDRPT-SEVLLKHRFVLR 311

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 41/268 (15%)
Query: 540 AAIKRANPQSEQGLAEFE---TEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGT 595
            A+K   P +   L E E   +E+++LS L  H ++V+L+G C      +++ EY   G 
Sbjct: 56  VAVKMLKPSAH--LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 113
Query: 596 L-------RSHLFGSDLPPLTWKQRLDA---------CIGAARGLHYLHTGAERGIIHRD 639
           L       R     S   P   +    A             A+G+ +L   A +  IHRD
Sbjct: 114 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRD 170
Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDV 699
           +   NILL    + K+ DFGL++   +  +  V    +    ++ PE  +    T +SDV
Sbjct: 171 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDV 230
Query: 700 YSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPE-SLE 758
           +S+G+ L+E+    +   P +P D      + M  +  R L            SPE +  
Sbjct: 231 WSYGIFLWELFSLGSSPYPGMPVDS---KFYKMIKEGFRML------------SPEHAPA 275
Query: 759 KFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
           +  +I + C D +   RPT  +++  +E
Sbjct: 276 EMYDIMKTCWDADPLKRPTFKQIVQLIE 303

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           TEI +L +L H +++ L    +   E+ LV E +  G L   +        + +   DA 
Sbjct: 97  TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY--YSERDAADAV 154
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVST 674
                 + YLH   E GI+HRD+K  N+L      +   K++DFGLSK    +EH  +  
Sbjct: 155 KQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI---VEHQVLMK 208
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
            V G+ GY  PE         + D++S G++ + ++C
Sbjct: 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLC 245

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 7/156 (4%)
Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           TE  +L   RH  L +L       + +  V EY   G L  HL    +      +   A 
Sbjct: 57  TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 116
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           I +A  L YLH+   R +++RD+K  N++LD++   K++DFGL K G S   T  +    
Sbjct: 117 IVSA--LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-- 169
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           G+  YL PE           D +  GVV++E++C R
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           E   E  ++ +L + ++V +IG C+ ++ M LV E    G L  +L  +    +  K  +
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNII 473
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH-VS 673
           +     + G+ YL    E   +HRD+   N+LL     AK+SDFGLSK   + E+ +   
Sbjct: 474 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 530
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           T  K    +  PE     + + KSDV+SFGV+++E 
Sbjct: 531 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 566

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 109/259 (42%), Gaps = 35/259 (13%)
Query: 539 LAAIKR---ANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           + AIK+   +  QS +   +   E+  L KLRH + +   G    ++   LV EY     
Sbjct: 42  VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSA 101
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
             S L      PL   +      GA +GL YLH+     +IHRDVK  NILL E  + K+
Sbjct: 102 --SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKL 156
Query: 656 SDFG-LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ---QLTEKSDVYSFGVVLFEVVC 711
            DFG  S   P       +    G+  ++ PE        Q   K DV+S G+   E+  
Sbjct: 157 GDFGSASIMAP-------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL-- 207
Query: 712 ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDE 771
             A   P L       A + +   +  +L+S       G++S    E F    + CL   
Sbjct: 208 --AERKPPLFNMNAMSALYHIAQNESPALQS-------GHWS----EYFRNFVDSCLQKI 254
Query: 772 GKNRPTMGEVLWHLEYVLQ 790
            ++RPT  EVL    +VL+
Sbjct: 255 PQDRPT-SEVLLKHRFVLR 272

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 28/234 (11%)
Query: 554 AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL--FGSD---LPPL 608
           A+   EI++L +L H +++       E NE+ +V E    G L   +  F      +P  
Sbjct: 77  ADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPER 136
Query: 609 T-WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM 667
           T WK  +  C      L ++H+   R ++HRD+K  N+ +    V K+ D GL +   S 
Sbjct: 137 TVWKYFVQLC----SALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS- 188
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
             T  + ++ G+  Y+ PE         KSD++S G +L+E+    A +      D++NL
Sbjct: 189 -KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM----AALQSPFYGDKMNL 243
Query: 728 ADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEV 781
                K      ++    P L  ++  E L    ++   C++ + + RP +  V
Sbjct: 244 YSLCKK------IEQCDYPPLPSDHYSEELR---QLVNMCINPDPEKRPDVTYV 288

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           E   E  ++ +L + ++V +IG C+ ++ M LV E    G L  +L  +    +  K  +
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNII 472
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH-VS 673
           +     + G+ YL    E   +HRD+   N+LL     AK+SDFGLSK   + E+ +   
Sbjct: 473 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           T  K    +  PE     + + KSDV+SFGV+++E 
Sbjct: 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 565

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 7/156 (4%)
Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           TE  +L   RH  L +L       + +  V EY   G L  HL    +      +   A 
Sbjct: 54  TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           I +A  L YLH+   R +++RD+K  N++LD++   K++DFGL K G S   T  +    
Sbjct: 114 IVSA--LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-- 166
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           G+  YL PE           D +  GVV++E++C R
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMIL--VYEYMANGTL 596
            AIK+ +P   Q   +    EI++L   RH +++ +       N++I     E M +  +
Sbjct: 53  VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI-------NDIIRAPTIEQMKDVYI 105
Query: 597 RSHLFGSDLPPLTWKQRLD---ACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
              L  +DL  L   Q L     C       RGL Y+H+     ++HRD+K +N+LL+  
Sbjct: 106 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 162
Query: 651 FVAKMSDFGLSKTG-PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFE 708
              K+ DFGL++   P  +HT   T    +  Y  PE     +  T+  D++S G +L E
Sbjct: 163 SDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 222
Query: 709 VVCARAVINPTLPKDQIN 726
           ++  R +       DQ+N
Sbjct: 223 MLSNRPIFPGKHYLDQLN 240

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 82  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEI 141
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    ++ V 
Sbjct: 142 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV- 195
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           G+  Y+ PE    +  ++ SD+++ G +++++V  
Sbjct: 196 GTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILV-YEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           E +++S+L H   V L  FC + +E +     Y  NG L  ++        T  +   A 
Sbjct: 87  ERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 145
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAV 676
           I +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    +  V
Sbjct: 146 IVSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 200
Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
            G+  Y+ PE    +   + SD+++ G +++++V
Sbjct: 201 -GTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 233

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 41/268 (15%)
Query: 540 AAIKRANPQSEQGLAEFE---TEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGT 595
            A+K   P +   L E E   +E+++LS L  H ++V+L+G C      +++ EY   G 
Sbjct: 79  VAVKMLKPSAH--LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 136
Query: 596 L-------RSHLFGSDLPPLTWKQRLDA---------CIGAARGLHYLHTGAERGIIHRD 639
           L       R     S   P   +    A             A+G+ +L   A +  IHRD
Sbjct: 137 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRD 193
Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDV 699
           +   NILL    + K+ DFGL++   +  +  V    +    ++ PE  +    T +SDV
Sbjct: 194 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDV 253
Query: 700 YSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPE-SLE 758
           +S+G+ L+E+    +   P +P D      + M  +  R L            SPE +  
Sbjct: 254 WSYGIFLWELFSLGSSPYPGMPVDS---KFYKMIKEGFRML------------SPEHAPA 298
Query: 759 KFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
           +  +I + C D +   RPT  +++  +E
Sbjct: 299 EMYDIMKTCWDADPLKRPTFKQIVQLIE 326

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 5/153 (3%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 80  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K          + A  G
Sbjct: 140 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 679 SFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           +  Y+ PE    +   + SD+++ G +++++V 
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 41/268 (15%)
Query: 540 AAIKRANPQSEQGLAEFE---TEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGT 595
            A+K   P +   L E E   +E+++LS L  H ++V+L+G C      +++ EY   G 
Sbjct: 74  VAVKMLKPSAH--LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 131
Query: 596 L-------RSHLFGSDLPPLTWKQRLDA---------CIGAARGLHYLHTGAERGIIHRD 639
           L       R     S   P   +    A             A+G+ +L   A +  IHRD
Sbjct: 132 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRD 188
Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDV 699
           +   NILL    + K+ DFGL++   +  +  V    +    ++ PE  +    T +SDV
Sbjct: 189 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDV 248
Query: 700 YSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPE-SLE 758
           +S+G+ L+E+    +   P +P D      + M  +  R L            SPE +  
Sbjct: 249 WSYGIFLWELFSLGSSPYPGMPVDS---KFYKMIKEGFRML------------SPEHAPA 293
Query: 759 KFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
           +  +I + C D +   RPT  +++  +E
Sbjct: 294 EMYDIMKTCWDADPLKRPTFKQIVQLIE 321

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 7/156 (4%)
Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           TE  +L   RH  L +L       + +  V EY   G L  HL    +      +   A 
Sbjct: 59  TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 118
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           I +A  L YLH+   R +++RD+K  N++LD++   K++DFGL K G S   T       
Sbjct: 119 IVSA--LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFC 171
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           G+  YL PE           D +  GVV++E++C R
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 41/268 (15%)
Query: 540 AAIKRANPQSEQGLAEFE---TEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGT 595
            A+K   P +   L E E   +E+++LS L  H ++V+L+G C      +++ EY   G 
Sbjct: 72  VAVKMLKPSAH--LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 129
Query: 596 L-------RSHLFGSDLPPLTWKQRLDA---------CIGAARGLHYLHTGAERGIIHRD 639
           L       R     S   P   +    A             A+G+ +L   A +  IHRD
Sbjct: 130 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRD 186
Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDV 699
           +   NILL    + K+ DFGL++   +  +  V    +    ++ PE  +    T +SDV
Sbjct: 187 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDV 246
Query: 700 YSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPE-SLE 758
           +S+G+ L+E+    +   P +P D      + M  +  R L            SPE +  
Sbjct: 247 WSYGIFLWELFSLGSSPYPGMPVDS---KFYKMIKEGFRML------------SPEHAPA 291
Query: 759 KFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
           +  +I + C D +   RPT  +++  +E
Sbjct: 292 EMYDIMKTCWDADPLKRPTFKQIVQLIE 319

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 7/156 (4%)
Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           TE  +L   RH  L +L       + +  V EY   G L  HL    +      +   A 
Sbjct: 54  TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           I +A  L YLH+   R +++RD+K  N++LD++   K++DFGL K G S   T       
Sbjct: 114 IVSA--LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFC 166
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           G+  YL PE           D +  GVV++E++C R
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 27/182 (14%)
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           +   + L +LH+  +  +IHRDVK +N+L++     KM DFG+S     +  +   T   
Sbjct: 160 VSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGY---LVDSVAKTIDA 214
Query: 678 GSFGYLDPEY----FWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMK 733
           G   Y+ PE       ++  + KSD++S G+ + E+   R       P D      W   
Sbjct: 215 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR------FPYDS-----WGTP 263
Query: 734 WQKQRSLKSIIDPHLKGN-YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH 792
           +Q+ + +     P L  + +S E    F +   +CL    K RPT  E++ H  +   LH
Sbjct: 264 FQQLKQVVEEPSPQLPADKFSAE----FVDFTSQCLKKNSKERPTYPELMQHPFFT--LH 317
Query: 793 EA 794
           E+
Sbjct: 318 ES 319

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 540 AAIKRA-NPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
            AIK   N  S+    +F  E   + +  H H+V LIG   E N + ++ E    G LRS
Sbjct: 41  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 99
Query: 599 HL----FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAK 654
            L    F  DL  L     +      +  L YL +   +  +HRD+   N+L+      K
Sbjct: 100 FLQVRKFSLDLASL-----ILYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVK 151
Query: 655 MSDFGLSKTGPSMEHTHVSTAVKGSF--GYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           + DFGLS+    ME +    A KG     ++ PE    ++ T  SDV+ FGV ++E++
Sbjct: 152 LGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 41/268 (15%)
Query: 540 AAIKRANPQSEQGLAEFE---TEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGT 595
            A+K   P +   L E E   +E+++LS L  H ++V+L+G C      +++ EY   G 
Sbjct: 79  VAVKMLKPSAH--LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 136
Query: 596 L-------RSHLFGSDLPPLTWKQRLDA---------CIGAARGLHYLHTGAERGIIHRD 639
           L       R     S   P   +    A             A+G+ +L   A +  IHRD
Sbjct: 137 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRD 193
Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDV 699
           +   NILL    + K+ DFGL++   +  +  V    +    ++ PE  +    T +SDV
Sbjct: 194 LAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDV 253
Query: 700 YSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPE-SLE 758
           +S+G+ L+E+    +   P +P D      + M  +  R L            SPE +  
Sbjct: 254 WSYGIFLWELFSLGSSPYPGMPVDS---KFYKMIKEGFRML------------SPEHAPA 298
Query: 759 KFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
           +  +I + C D +   RPT  +++  +E
Sbjct: 299 EMYDIMKTCWDADPLKRPTFKQIVQLIE 326

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 7/156 (4%)
Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           TE  +L   RH  L +L       + +  V EY   G L  HL    +      +   A 
Sbjct: 54  TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           I +A  L YLH+   R +++RD+K  N++LD++   K++DFGL K G S   T       
Sbjct: 114 IVSA--LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFC 166
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           G+  YL PE           D +  GVV++E++C R
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 7/156 (4%)
Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           TE  +L   RH  L +L       + +  V EY   G L  HL    +      +   A 
Sbjct: 54  TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           I +A  L YLH+   R +++RD+K  N++LD++   K++DFGL K G S   T       
Sbjct: 114 IVSA--LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFC 166
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           G+  YL PE           D +  GVV++E++C R
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 115/247 (46%), Gaps = 26/247 (10%)
Query: 540 AAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSH 599
            AI++ N Q +        EI ++ + ++ ++V+ +      +E+ +V EY+A G+L   
Sbjct: 48  VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 107
Query: 600 LFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG 659
           +  +    +   Q    C    + L +LH+     +IHRD+K+ NILL  +   K++DFG
Sbjct: 108 VTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFG 161
Query: 660 L-SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINP 718
             ++  P  E +  ST V G+  ++ PE   R+    K D++S G++  E++       P
Sbjct: 162 FCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP---P 215
Query: 719 TLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEK-FGEIAEKCLDDEGKNRPT 777
            L ++ +            R+L  I         +PE L   F +   +CLD + + R +
Sbjct: 216 YLNENPL------------RALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGS 263
Query: 778 MGEVLWH 784
             E+L H
Sbjct: 264 AKELLQH 270

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 83  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 142
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    ++ V 
Sbjct: 143 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV- 196
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           G+  Y+ PE    +   + SD+++ G +++++V  
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           TE  +L   RH  L +L       + +  V EY   G L  HL    +      +   A 
Sbjct: 197 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 256
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           I +A  L YLH+  E+ +++RD+K  N++LD++   K++DFGL K G  ++         
Sbjct: 257 IVSA--LDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG--IKDGATMKTFC 310
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           G+  YL PE           D +  GVV++E++C R
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           TE  +L   RH  L +L       + +  V EY   G L  HL    +      +   A 
Sbjct: 200 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 259
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           I +A  L YLH+  E+ +++RD+K  N++LD++   K++DFGL K G  ++         
Sbjct: 260 IVSA--LDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG--IKDGATMKTFC 313
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           G+  YL PE           D +  GVV++E++C R
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 40/250 (16%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS-HLFGSDLPPLTWKQRLDAC 617
           EI++L +LRH +LV+L+  C ++    LV+E++ +  L    LF + L     ++ L   
Sbjct: 74  EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI 133
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           I    G+ + H+     IIHRD+K  NIL+ ++ V K+ DFG ++T  +    +      
Sbjct: 134 IN---GIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV-- 185
Query: 678 GSFGYLDPEYFWRQQLTEKS-DVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK 736
            +  Y  PE         K+ DV++ G ++ E+        P  P D    +D    +  
Sbjct: 186 ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG----EPLFPGD----SDIDQLYHI 237
Query: 737 QRSLKSII---------DPHLKGNYSPESLE---------KFGEI----AEKCLDDEGKN 774
              L ++I         +P   G   PE  E         K  E+    A+KCL  +   
Sbjct: 238 MMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDK 297
Query: 775 RPTMGEVLWH 784
           RP   E+L H
Sbjct: 298 RPFCAELLHH 307

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 608 LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM 667
           LT +  +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL++     
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
                    +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P +  D+   
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--- 301
Query: 728 ADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY 787
                  +  R LK           +PE  +   +    C   E   RPT  E++ HL  
Sbjct: 302 -------EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGN 350
Query: 788 VLQ 790
           +LQ
Sbjct: 351 LLQ 353

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 540 AAIKRA-NPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
            AIK   N  S+    +F  E   + +  H H+V LIG   E N + ++ E    G LRS
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 479
Query: 599 HL----FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAK 654
            L    F  DL  L            +  L YL +   +  +HRD+   N+L+      K
Sbjct: 480 FLQVRKFSLDLASLIL-----YAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVK 531
Query: 655 MSDFGLSKTGPSMEHTHVSTAVKGSF--GYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           + DFGLS+    ME +    A KG     ++ PE    ++ T  SDV+ FGV ++E++
Sbjct: 532 LGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 608 LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM 667
           LT +  +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL++     
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
                    +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P +  D+   
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--- 303
Query: 728 ADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY 787
                  +  R LK           +PE  +   +    C   E   RPT  E++ HL  
Sbjct: 304 -------EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGN 352
Query: 788 VLQ 790
           +LQ
Sbjct: 353 LLQ 355

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 608 LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM 667
           LT +  +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL++     
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
                    +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P +  D+   
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--- 308
Query: 728 ADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY 787
                  +  R LK           +PE  +   +    C   E   RPT  E++ HL  
Sbjct: 309 -------EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGN 357
Query: 788 VLQ 790
           +LQ
Sbjct: 358 LLQ 360

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 608 LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM 667
           LT +  +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL++     
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
                    +    ++ PE  + +  T +SDV+SFGV+L+E+    A   P +  D+   
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--- 310
Query: 728 ADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY 787
                  +  R LK           +PE  +   +    C   E   RPT  E++ HL  
Sbjct: 311 -------EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGN 359
Query: 788 VLQ 790
           +LQ
Sbjct: 360 LLQ 362

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 82  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    +  V 
Sbjct: 142 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 195
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           G+  Y+ PE    +   + SD+++ G +++++V  
Sbjct: 196 GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 82  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    +  V 
Sbjct: 142 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 195
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           G+  Y+ PE    +   + SD+++ G +++++V  
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 83  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 142
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    +  V 
Sbjct: 143 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 196
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           G+  Y+ PE    +   + SD+++ G +++++V  
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 82  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    +  V 
Sbjct: 142 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 195
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           G+  Y+ PE    +   + SD+++ G +++++V  
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 85  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 144
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    +  V 
Sbjct: 145 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 198
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           G+  Y+ PE    +   + SD+++ G +++++V  
Sbjct: 199 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 79  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 138
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    ++ V 
Sbjct: 139 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV- 192
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           G+  Y+ PE    +   + SD+++ G +++++V  
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 80  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    +  V 
Sbjct: 140 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 193
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           G+  Y+ PE    +   + SD+++ G +++++V  
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           TE  +L   RH  L +L       + +  V EY   G L  HL    +      +   A 
Sbjct: 58  TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 117
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           I +A  L YLH+  E+ +++RD+K  N++LD++   K++DFGL K G  ++         
Sbjct: 118 IVSA--LDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG--IKDGATMKXFC 171
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           G+  YL PE           D +  GVV++E++C R
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 80  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    +  V 
Sbjct: 140 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 193
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           G+  Y+ PE    +   + SD+++ G +++++V  
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 82  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    +  V 
Sbjct: 142 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 195
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           G+  Y+ PE    +   + SD+++ G +++++V  
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           TE  +L   RH  L +L       + +  V EY   G L  HL    +      +   A 
Sbjct: 59  TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 118
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           I +A  L YLH+  E+ +++RD+K  N++LD++   K++DFGL K G  ++         
Sbjct: 119 IVSA--LDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG--IKDGATMKXFC 172
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           G+  YL PE           D +  GVV++E++C R
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 9/140 (6%)
Query: 577 FCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
           FC  Q +  +  V EY+  G L  H+       L+      A I    GL +LH+   +G
Sbjct: 84  FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI--ILGLQFLHS---KG 138
Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
           I++RD+K  NILLD++   K++DFG+ K   +M     +    G+  Y+ PE    Q+  
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCKE--NMLGDAKTNXFCGTPDYIAPEILLGQKYN 196
Query: 695 EKSDVYSFGVVLFEVVCARA 714
              D +SFGV+L+E++  ++
Sbjct: 197 HSVDWWSFGVLLYEMLIGQS 216

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 23/165 (13%)
Query: 554 AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL-----RSHLFGSDLPPL 608
           A  + E  +L +++H  +V LI       ++ L+ EY++ G L     R  +F  D    
Sbjct: 66  AHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED---- 121
Query: 609 TWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP 665
                  AC   A     L +LH   ++GII+RD+K  NI+L+     K++DFGL K   
Sbjct: 122 ------TACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE-- 170
Query: 666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           S+    V+    G+  Y+ PE   R       D +S G ++++++
Sbjct: 171 SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 80  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    +  V 
Sbjct: 140 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 193
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           G+  Y+ PE    +   + SD+++ G +++++V 
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 60  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 119
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    +  V 
Sbjct: 120 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 173
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           G+  Y+ PE    +   + SD+++ G +++++V  
Sbjct: 174 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 82  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    +  V 
Sbjct: 142 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 195
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           G+  Y+ PE    +   + SD+++ G +++++V 
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 58  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 117
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    +  V 
Sbjct: 118 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 171
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           G+  Y+ PE    +   + SD+++ G +++++V  
Sbjct: 172 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 9/140 (6%)
Query: 577 FCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
           FC  Q +  +  V EY+  G L  H+       L+      A I    GL +LH+   +G
Sbjct: 85  FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI--ILGLQFLHS---KG 139
Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
           I++RD+K  NILLD++   K++DFG+ K   +M     +    G+  Y+ PE    Q+  
Sbjct: 140 IVYRDLKLDNILLDKDGHIKIADFGMCKE--NMLGDAKTNEFCGTPDYIAPEILLGQKYN 197
Query: 695 EKSDVYSFGVVLFEVVCARA 714
              D +SFGV+L+E++  ++
Sbjct: 198 HSVDWWSFGVLLYEMLIGQS 217

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 59  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 118
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    +  V 
Sbjct: 119 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 172
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           G+  Y+ PE    +   + SD+++ G +++++V  
Sbjct: 173 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           TE  +L   RH  L +L       + +  V EY   G L  HL    +      +   A 
Sbjct: 57  TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 116
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           I +A  L YLH+  E+ +++RD+K  N++LD++   K++DFGL K G  ++         
Sbjct: 117 IVSA--LDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG--IKDGATMKXFC 170
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           G+  YL PE           D +  GVV++E++C R
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 24/176 (13%)
Query: 546 NPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDL 605
           N   E+   E   EI +L  L H +++ L    +++    LV E+   G L   +     
Sbjct: 83  NKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN--- 139
Query: 606 PPLTWKQRLDACIGA------ARGLHYLHTGAERGIIHRDVKTTNILLDEN---FVAKMS 656
                + + D C  A        G+ YLH   +  I+HRD+K  NILL+        K+ 
Sbjct: 140 -----RHKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIV 191
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           DFGLS         +      G+  Y+ PE   +++  EK DV+S GV+++ ++C 
Sbjct: 192 DFGLS---SFFSKDYKLRDRLGTAYYIAPEVL-KKKYNEKCDVWSCGVIMYILLCG 243

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 23/165 (13%)
Query: 554 AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL-----RSHLFGSDLPPL 608
           A  + E  +L +++H  +V LI       ++ L+ EY++ G L     R  +F  D    
Sbjct: 66  AHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED---- 121
Query: 609 TWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP 665
                  AC   A     L +LH   ++GII+RD+K  NI+L+     K++DFGL K   
Sbjct: 122 ------TACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE-- 170
Query: 666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           S+    V+    G+  Y+ PE   R       D +S G ++++++
Sbjct: 171 SIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 57  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 116
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    +  V 
Sbjct: 117 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 170
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           G+  Y+ PE    +   + SD+++ G +++++V  
Sbjct: 171 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 64  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 123
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    +  V 
Sbjct: 124 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 177
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           G+  Y+ PE    +   + SD+++ G +++++V 
Sbjct: 178 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 211

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+++L +    ++V   G      E+ +  E+M  G+L   L  +   P     ++   I
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS--I 173
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHVSTAVK 677
              +GL YL    +  I+HRDVK +NIL++     K+ DFG+S +   SM ++ V     
Sbjct: 174 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----- 226
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINP 718
           G+  Y+ PE       + +SD++S G+ L E+   R  I P
Sbjct: 227 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 267

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 607 PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS 666
           P+T +  +      ARG+ +L +   R  IHRD+   NILL EN V K+ DFGL++    
Sbjct: 195 PITMEDLISYSFQVARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN 726
                     +    ++ PE  + +  + KSDV+S+GV+L+E+        P +  D+  
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDE-- 309
Query: 727 LADWAMKWQKQRSLKSIIDPHLKGNYSPE-SLEKFGEIAEKCLDDEGKNRPTMGEVLWHL 785
             D+  + ++   ++           +PE S  +  +I   C   + K RP   E++  L
Sbjct: 310 --DFCSRLREGMRMR-----------APEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E +++S+L H   V L     +  ++     Y  NG L  ++        T  +   A I
Sbjct: 79  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 138
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVK 677
            +A  L YLH    +GIIHRD+K  NILL+E+   +++DFG +K   P  +    +  V 
Sbjct: 139 VSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 192
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           G+  Y+ PE    +   + SD+++ G +++++V  
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 558 TEIEMLSKLR-HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD- 615
           TE  +LS  R H  L  L       + +  V E++  G L  H+  S        +R D 
Sbjct: 72  TEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS--------RRFDE 123
Query: 616 --ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS 673
             A   AA  +  L    ++GII+RD+K  N+LLD     K++DFG+ K G       V+
Sbjct: 124 ARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC---NGVT 180
Query: 674 TAV-KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA 714
           TA   G+  Y+ PE           D ++ GV+L+E++C  A
Sbjct: 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHA 222

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 7/149 (4%)
Query: 562 MLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA 621
           +L  ++H  LV L       +++  V +Y+  G L  HL   +   L  + R  A    A
Sbjct: 92  LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL-QRERCFLEPRARFYAA-EIA 149
Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG 681
             L YLH+     I++RD+K  NILLD      ++DFGL K   ++EH   ++   G+  
Sbjct: 150 SALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKE--NIEHNSTTSTFCGTPE 204
Query: 682 YLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           YL PE   +Q      D +  G VL+E++
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEML 233

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+++L +    ++V   G      E+ +  E+M  G+L   L  +   P     ++   I
Sbjct: 64  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVS--I 121
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHVSTAVK 677
              RGL YL    +  I+HRDVK +NIL++     K+ DFG+S +   SM ++ V     
Sbjct: 122 AVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----- 174
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
           G+  Y+ PE       + +SD++S G+ L E+   R  I P   K+
Sbjct: 175 GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKE 220

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +   EIE+ + L H +++ L  +  ++  + L+ EY   G L   L  S     T+ ++ 
Sbjct: 69  QLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS----CTFDEQR 124
Query: 615 DACIGA--ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            A I    A  L Y H    + +IHRD+K  N+LL      K++DFG S   PS+     
Sbjct: 125 TATIMEELADALMYCHG---KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR---- 177
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
              + G+  YL PE    +   EK D++  GV+ +E++
Sbjct: 178 RKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELL 215

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 568 HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYL 627
           H H+++LI   +  + M LV++ M  G L  +L  ++   L+ K+           + +L
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL--TEKVALSEKETRSIMRSLLEAVSFL 216
Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY 687
           H      I+HRD+K  NILLD+N   ++SDFG S     +E       + G+ GYL PE 
Sbjct: 217 HAN---NIVHRDLKPENILLDDNMQIRLSDFGFSC---HLEPGEKLRELCGTPGYLAPEI 270
Query: 688 FWRQQLTE-------KSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS 739
             +  + E       + D+++ GV+LF ++       P   + QI +    M+ Q Q S
Sbjct: 271 L-KCSMDETHPGYGKEVDLWACGVILFTLLAGSP---PFWHRRQILMLRMIMEGQYQFS 325

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 10/158 (6%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA 616
           E EI  L  LRH H++ L        ++++V EY A G L  ++           +R   
Sbjct: 57  EREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQ 115
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
            I  A  + Y H      I+HRD+K  N+LLD+N   K++DFGLS     M   +     
Sbjct: 116 QIICA--IEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNI---MTDGNFLKTS 167
Query: 677 KGSFGYLDPEYF-WRQQLTEKSDVYSFGVVLFEVVCAR 713
            GS  Y  PE    +     + DV+S G+VL+ ++  R
Sbjct: 168 CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 24/228 (10%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA 616
           + EI +LS+    ++    G   +  ++ ++ EY+  G+    L    L        L  
Sbjct: 65  QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILRE 124
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
            +   +GL YLH+  ER I HRD+K  N+LL E    K++DFG++  G   +        
Sbjct: 125 IL---KGLDYLHS--ERKI-HRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXF 176
Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK 736
            G+  ++ PE   +     K+D++S G+   E+       +   P   + L         
Sbjct: 177 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL--------- 227
Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
              +     P L+G +S    + F E  E CL+ + + RPT  E+L H
Sbjct: 228 ---IPKNSPPTLEGQHS----KPFKEFVEACLNKDPRFRPTAKELLKH 268

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 577 FCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
           FC  Q++  + +V EYM  G L + +   D+P   W +   A +  A  L  +H+    G
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE-KWAKFYTAEVVLA--LDAIHS---MG 194
Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ--- 691
           +IHRDVK  N+LLD++   K++DFG           H  TAV G+  Y+ PE    Q   
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPEVLKSQGGD 253
Query: 692 -QLTEKSDVYSFGVVLFEVVCA 712
                + D +S GV LFE++  
Sbjct: 254 GYYGRECDWWSVGVFLFEMLVG 275

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+++L +    ++V   G      E+ +  E+M  G+L   L  +   P     ++   I
Sbjct: 81  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS--I 138
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHVSTAVK 677
              +GL YL    +  I+HRDVK +NIL++     K+ DFG+S +   SM ++ V     
Sbjct: 139 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----- 191
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
           G+  Y+ PE       + +SD++S G+ L E+   R  I P   K+
Sbjct: 192 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 237

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 28/186 (15%)
Query: 538 TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
            +  IK+++  +         E+ +L +L H +++ L  F +++    LV E    G L 
Sbjct: 50  AIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF 109
Query: 598 SHL-----FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---E 649
             +     F      +  KQ L        G  YLH   +  I+HRD+K  N+LL+    
Sbjct: 110 DEIILRQKFSEVDAAVIMKQVLS-------GTTYLH---KHNIVHRDLKPENLLLESKSR 159
Query: 650 NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG---YLDPEYFWRQQLTEKSDVYSFGVVL 706
           + + K+ DFGLS       H  V   +K   G   Y+ PE   R++  EK DV+S GV+L
Sbjct: 160 DALIKIVDFGLS------AHFEVGGKMKERLGTAYYIAPEVL-RKKYDEKCDVWSCGVIL 212
Query: 707 FEVVCA 712
           + ++C 
Sbjct: 213 YILLCG 218

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+++L +    ++V   G      E+ +  E+M  G+L   L  +   P     ++   I
Sbjct: 54  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS--I 111
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHVSTAVK 677
              +GL YL    +  I+HRDVK +NIL++     K+ DFG+S +   SM ++ V     
Sbjct: 112 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----- 164
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
           G+  Y+ PE       + +SD++S G+ L E+   R  I P   K+
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+++L +    ++V   G      E+ +  E+M  G+L   L  +   P     ++   I
Sbjct: 54  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS--I 111
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHVSTAVK 677
              +GL YL    +  I+HRDVK +NIL++     K+ DFG+S +   SM ++ V     
Sbjct: 112 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----- 164
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
           G+  Y+ PE       + +SD++S G+ L E+   R  I P   K+
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+++L +    ++V   G      E+ +  E+M  G+L   L  +   P     ++   I
Sbjct: 54  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS--I 111
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHVSTAVK 677
              +GL YL    +  I+HRDVK +NIL++     K+ DFG+S +   SM ++ V     
Sbjct: 112 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----- 164
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
           G+  Y+ PE       + +SD++S G+ L E+   R  I P   K+
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI++L +L H +++ L+     ++ + LV+++M   T    +   +   LT        +
Sbjct: 62  EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKAYML 119
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL YLH   +  I+HRD+K  N+LLDEN V K++DFGL+K+  S    +    V  
Sbjct: 120 MTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-- 174
Query: 679 SFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVI---NPTLPKD 723
           +  Y  PE  +  ++      Y  GV ++ V C  A +    P LP D
Sbjct: 175 TRWYRAPELLFGARM------YGVGVDMWAVGCILAELLLRVPFLPGD 216

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+++L +    ++V   G      E+ +  E+M  G+L   L  +   P     ++   I
Sbjct: 54  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS--I 111
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHVSTAVK 677
              +GL YL    +  I+HRDVK +NIL++     K+ DFG+S +   SM ++ V     
Sbjct: 112 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----- 164
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
           G+  Y+ PE       + +SD++S G+ L E+   R  I P   K+
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 34/259 (13%)
Query: 544 RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM------ILVYEYMANGTLR 597
           +A+  +   + EF  E   + +  H H+  L+G              +++  +M +G L 
Sbjct: 60  KADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLH 119
Query: 598 SHLFGS-------DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN 650
           + L  S       +LP  T  + +   +  A G+ YL +   R  IHRD+   N +L E+
Sbjct: 120 AFLLASRIGENPFNLPLQTLVRFM---VDIACGMEYLSS---RNFIHRDLAARNCMLAED 173
Query: 651 FVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
               ++DFGLS+   S ++     A K    +L  E       T  SDV++FGV ++E++
Sbjct: 174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM 233
Query: 711 CARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDD 770
                  P    +   + ++ +   + +               PE +E+  ++  +C   
Sbjct: 234 TRGQ--TPYAGIENAEIYNYLIGGNRLKQ-------------PPECMEEVYDLMYQCWSA 278
Query: 771 EGKNRPTMGEVLWHLEYVL 789
           + K RP+   +   LE +L
Sbjct: 279 DPKQRPSFTCLRMELENIL 297

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+++L +    ++V   G      E+ +  E+M  G+L   L  +   P     ++   I
Sbjct: 54  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS--I 111
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHVSTAVK 677
              +GL YL    +  I+HRDVK +NIL++     K+ DFG+S +   SM ++ V     
Sbjct: 112 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----- 164
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINP 718
           G+  Y+ PE       + +SD++S G+ L E+   R  I P
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 24/228 (10%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA 616
           + EI +LS+    ++    G   + +++ ++ EY+  G+    L             L  
Sbjct: 69  QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKE 128
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
            +   +GL YLH+  +   IHRD+K  N+LL E    K++DFG++  G   +        
Sbjct: 129 IL---KGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTF 180
Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK 736
            G+  ++ PE   +     K+D++S G+   E+       +   P   + L         
Sbjct: 181 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL--------- 231
Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
              +     P L G+++    + F E  + CL+ +   RPT  E+L H
Sbjct: 232 ---IPKNNPPTLVGDFT----KSFKEFIDACLNKDPSFRPTAKELLKH 272

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 13/165 (7%)
Query: 548 QSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHLFGSDL 605
           Q    + +   EI +L KL H ++V L+   D+ NE  + +V+E +  G +        L
Sbjct: 75  QPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME---VPTL 131
Query: 606 PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP 665
            PL+  Q         +G+ YLH    + IIHRD+K +N+L+ E+   K++DFG+S    
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 666 SMEHTHVSTAVKGSFGYLDPEYF--WRQQLTEKS-DVYSFGVVLF 707
             +    +T   G+  ++ PE     R+  + K+ DV++ GV L+
Sbjct: 189 GSDALLSNTV--GTPAFMAPESLSETRKIFSGKALDVWAMGVTLY 231

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
           L A+K+ + + +Q       E+ ++   +H ++V +       +E+ +V E++  G L  
Sbjct: 47  LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 106
Query: 599 HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF 658
            +  + +     +Q    C+   + L  LH    +G+IHRD+K+ +ILL  +   K+SDF
Sbjct: 107 IVTHTRM---NEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDF 160
Query: 659 G----LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           G    +SK  P  +       + G+  ++ PE   R     + D++S G+++ E+V
Sbjct: 161 GFCAQVSKEVPRRK------XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 210

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 26/247 (10%)
Query: 540 AAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSH 599
            AI++ N Q +        EI ++ + ++ ++V+ +      +E+ +V EY+A G+L   
Sbjct: 48  VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 107
Query: 600 LFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG 659
           +  +    +   Q    C    + L +LH+     +IHRD+K+ NILL  +   K++DFG
Sbjct: 108 VTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFG 161
Query: 660 L-SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINP 718
             ++  P  E +  S  V G+  ++ PE   R+    K D++S G++  E++       P
Sbjct: 162 FCAQITP--EQSKRSEMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP---P 215
Query: 719 TLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEK-FGEIAEKCLDDEGKNRPT 777
            L ++ +            R+L  I         +PE L   F +   +CLD + + R +
Sbjct: 216 YLNENPL------------RALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGS 263
Query: 778 MGEVLWH 784
             E+L H
Sbjct: 264 AKELLQH 270

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 85/175 (48%), Gaps = 16/175 (9%)
Query: 540 AAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSH 599
            A+K+ + + +Q       E+ ++    H ++V +       +E+ +V E++  G L   
Sbjct: 73  VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI 132
Query: 600 LFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG 659
           +  + +     +Q    C+   R L YLH    +G+IHRD+K+ +ILL  +   K+SDFG
Sbjct: 133 VTHTRM---NEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFG 186
Query: 660 ----LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
               +SK  P  +       + G+  ++ PE   R     + D++S G+++ E++
Sbjct: 187 FCAQVSKEVPKRK------XLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMI 235

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
           +  IK+++  +         E+ +L +L H +++ L  F +++    LV E    G L  
Sbjct: 34  IKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL-- 91
Query: 599 HLFGSDLPPLTWKQR---LDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLD---E 649
                    +  +Q+   +DA +   +   G  YLH   +  I+HRD+K  N+LL+    
Sbjct: 92  ------FDEIILRQKFSEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSR 142
Query: 650 NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG---YLDPEYFWRQQLTEKSDVYSFGVVL 706
           + + K+ DFGLS       H  V   +K   G   Y+ PE   R++  EK DV+S GV+L
Sbjct: 143 DALIKIVDFGLSA------HFEVGGKMKERLGTAYYIAPEVL-RKKYDEKCDVWSCGVIL 195
Query: 707 FEVVCA 712
           + ++C 
Sbjct: 196 YILLCG 201

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
           L A+K+ + + +Q       E+ ++   +H ++V +       +E+ +V E++  G L  
Sbjct: 56  LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 115
Query: 599 HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF 658
            +  + +     +Q    C+   + L  LH    +G+IHRD+K+ +ILL  +   K+SDF
Sbjct: 116 IVTHTRM---NEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDF 169
Query: 659 G----LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           G    +SK  P  +       + G+  ++ PE   R     + D++S G+++ E+V
Sbjct: 170 GFCAQVSKEVPRRK------XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 219

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
           L A+K+ + + +Q       E+ ++   +H ++V +       +E+ +V E++  G L  
Sbjct: 58  LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 117
Query: 599 HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF 658
            +  + +     +Q    C+   + L  LH    +G+IHRD+K+ +ILL  +   K+SDF
Sbjct: 118 IVTHTRM---NEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDF 171
Query: 659 G----LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           G    +SK  P  +       + G+  ++ PE   R     + D++S G+++ E+V
Sbjct: 172 GFCAQVSKEVPRRK------XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 221

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 546 NPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG-SD 604
           NP S Q L     E+ ++  L H ++V L    + +  + L+ EY + G +  +L     
Sbjct: 54  NPTSLQKLFR---EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR 110
Query: 605 LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK-- 662
           +     + +    + A +  H      ++ I+HRD+K  N+LLD +   K++DFG S   
Sbjct: 111 MKEKEARSKFRQIVSAVQYCH------QKRIVHRDLKAENLLLDADMNIKIADFGFSNEF 164
Query: 663 -TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTL 720
             G  ++      A  G+  Y  PE F  ++    + DV+S GV+L+ +V        +L
Sbjct: 165 TVGGKLD------AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SL 212
Query: 721 PKDQINLAD 729
           P D  NL +
Sbjct: 213 PFDGQNLKE 221

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
           L A+K+ + + +Q       E+ ++   +H ++V +       +E+ +V E++  G L  
Sbjct: 51  LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 110
Query: 599 HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF 658
            +  + +     +Q    C+   + L  LH    +G+IHRD+K+ +ILL  +   K+SDF
Sbjct: 111 IVTHTRM---NEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDF 164
Query: 659 G----LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           G    +SK  P  +       + G+  ++ PE   R     + D++S G+++ E+V
Sbjct: 165 GFCAQVSKEVPRRK------XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 214

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 34/236 (14%)
Query: 558 TEIEMLSKLRHRHLVSLIG-FCDEQNEMI-LVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           +E+ +L +L+H ++V       D  N  + +V EY   G L S +          +Q LD
Sbjct: 54  SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT----KERQYLD 109
Query: 616 ------ACIGAARGLHYLHTGAERG--IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM 667
                         L   H  ++ G  ++HRD+K  N+ LD     K+ DFGL++    +
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI---L 166
Query: 668 EH-THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN 726
            H T  + A  G+  Y+ PE   R    EKSD++S G +L+E+    A++ P     Q  
Sbjct: 167 NHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC---ALMPPFTAFSQKE 223
Query: 727 LADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
           LA    + + +R         +   YS E      EI  + L+ +  +RP++ E+L
Sbjct: 224 LAGKIREGKFRR---------IPYRYSDE----LNEIITRMLNLKDYHRPSVEEIL 266

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E ++L K+  R +VSL    + ++ + LV   M  G L+ H++          + +    
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
               GL  LH   ER I++RD+K  NILLD++   ++SD GL+   P  E   +   V G
Sbjct: 294 EICCGLEDLHR--ER-IVYRDLKPENILLDDHGHIRISDLGLAVHVP--EGQTIKGRV-G 347
Query: 679 SFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA 714
           + GY+ PE    ++ T   D ++ G +L+E++  ++
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 18/185 (9%)
Query: 540 AAIKRANPQSEQGL-AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
            AIK    ++E  L  EF  E  + ++L+H ++V L+G   +   + +++ Y ++G L  
Sbjct: 42  VAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE 101
Query: 599 HL--------FGSDLPPLTWKQRLDA------CIGAARGLHYLHTGAERGIIHRDVKTTN 644
            L         GS     T K  L+           A G+ YL   +   ++H+D+ T N
Sbjct: 102 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRN 158
Query: 645 ILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGV 704
           +L+ +    K+SD GL +   + ++  +         ++ PE     + +  SD++S+GV
Sbjct: 159 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 218
Query: 705 VLFEV 709
           VL+EV
Sbjct: 219 VLWEV 223

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
           L A+K+ + + +Q       E+ ++   +H ++V +       +E+ +V E++  G L  
Sbjct: 178 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 237
Query: 599 HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF 658
            +  + +     +Q    C+   + L  LH    +G+IHRD+K+ +ILL  +   K+SDF
Sbjct: 238 IVTHTRM---NEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDF 291
Query: 659 G----LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           G    +SK  P  +       + G+  ++ PE   R     + D++S G+++ E+V
Sbjct: 292 GFCAQVSKEVPRRK------XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 341

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 16/176 (9%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
           L A+K+ + + +Q       E+ ++   +H ++V +       +E+ +V E++  G L  
Sbjct: 101 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 160
Query: 599 HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF 658
            +  + +     +Q    C+   + L  LH    +G+IHRD+K+ +ILL  +   K+SDF
Sbjct: 161 IVTHTRM---NEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDF 214
Query: 659 G----LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           G    +SK  P          + G+  ++ PE   R     + D++S G+++ E+V
Sbjct: 215 GFCAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 264

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 12/165 (7%)
Query: 548 QSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDL-- 605
           +S+  + + E EIE+L  L H +++ +    ++ + M +V E    G L   +  +    
Sbjct: 59  RSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARG 118
Query: 606 PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE---NFVAKMSDFGLSK 662
             L+     +        L Y H+   + ++H+D+K  NIL  +   +   K+ DFGL++
Sbjct: 119 KALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175
Query: 663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
              S EH   ST   G+  Y+ PE F R  +T K D++S GVV++
Sbjct: 176 LFKSDEH---STNAAGTALYMAPEVFKRD-VTFKCDIWSAGVVMY 216

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 18/185 (9%)
Query: 540 AAIKRANPQSEQGL-AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
            AIK    ++E  L  EF  E  + ++L+H ++V L+G   +   + +++ Y ++G L  
Sbjct: 59  VAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE 118
Query: 599 HL--------FGSDLPPLTWKQRLDA------CIGAARGLHYLHTGAERGIIHRDVKTTN 644
            L         GS     T K  L+           A G+ YL   +   ++H+D+ T N
Sbjct: 119 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRN 175
Query: 645 ILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGV 704
           +L+ +    K+SD GL +   + ++  +         ++ PE     + +  SD++S+GV
Sbjct: 176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 235
Query: 705 VLFEV 709
           VL+EV
Sbjct: 236 VLWEV 240

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E ++L K+  R +VSL    + ++ + LV   M  G L+ H++          + +    
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
               GL  LH   ER I++RD+K  NILLD++   ++SD GL+   P  E   +   V G
Sbjct: 294 EICCGLEDLHR--ER-IVYRDLKPENILLDDHGHIRISDLGLAVHVP--EGQTIKGRV-G 347
Query: 679 SFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA 714
           + GY+ PE    ++ T   D ++ G +L+E++  ++
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 15/159 (9%)
Query: 559 EIEMLSKLR---HRHLVSLIGFC-----DEQNEMILVYEYMANGTLRSHLFGSDLPPLTW 610
           E+ +L +L    H ++V L+  C     D + ++ LV+E++ +  LR++L  +  P L  
Sbjct: 61  EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPA 119
Query: 611 KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT 670
           +   D      RGL +LH      I+HRD+K  NIL+      K++DFGL++      + 
Sbjct: 120 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQ 173
Query: 671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
              T V  +  Y  PE   +       D++S G +  E+
Sbjct: 174 MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 93/228 (40%), Gaps = 31/228 (13%)
Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG--- 634
            D + E +LV EY  NG+L  +L    L    W           RGL YLHT   RG   
Sbjct: 81  ADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHY 137
Query: 635 ---IIHRDVKTTNILLDENFVAKMSDFGLSK--TGPSM----EHTHVSTAVKGSFGYLDP 685
              I HRD+ + N+L+  +    +SDFGLS   TG  +    E  + + +  G+  Y+ P
Sbjct: 138 KPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAP 197
Query: 686 EYFW-------RQQLTEKSDVYSFGVVLFEVV--CARAVINPTLPKDQINLADWAMKWQK 736
           E           +   ++ D+Y+ G++ +E+   C       ++P+ Q+           
Sbjct: 198 EVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPT 257
Query: 737 QRSLKSIIDPHLKGNYSPE-------SLEKFGEIAEKCLDDEGKNRPT 777
              ++ ++    +    PE       ++    E  E C D + + R T
Sbjct: 258 FEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLT 305

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQN----EMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           E E+  L  ++H +++  IG          ++ L+  +   G+L   L  +    ++W +
Sbjct: 66  EYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNE 122
Query: 613 RLDACIGAARGLHYLHT-------GAERGIIHRDVKTTNILLDENFVAKMSDFGLS---K 662
                   ARGL YLH        G +  I HRD+K+ N+LL  N  A ++DFGL+   +
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182
Query: 663 TGPSMEHTHVSTAVKGSFGYLDPEYF-----WRQQLTEKSDVYSFGVVLFEV 709
            G S   TH      G+  Y+ PE       +++    + D+Y+ G+VL+E+
Sbjct: 183 AGKSAGDTHGQV---GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 16/172 (9%)
Query: 547 PQSEQGLA-EFETEIEMLSKLR---HRHLVSLIGFC-----DEQNEMILVYEYMANGTLR 597
           P  E+GL      E+ +L +L    H ++V L+  C     D + ++ LV+E++ +  LR
Sbjct: 40  PNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLR 98
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           ++L  +  P L  +   D      RGL +LH      I+HRD+K  NIL+      K++D
Sbjct: 99  TYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLAD 155
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           FGL++      +      V  +  Y  PE   +       D++S G +  E+
Sbjct: 156 FGLARI---YSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 26/189 (13%)
Query: 546 NPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG-SD 604
           NP S Q L     E+ ++  L H ++V L    + +  + LV EY + G +  +L     
Sbjct: 54  NPTSLQKLFR---EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR 110
Query: 605 LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK-- 662
           +     + +    + A +  H      ++ I+HRD+K  N+LLD +   K++DFG S   
Sbjct: 111 MKEKEARAKFRQIVSAVQYCH------QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF 164
Query: 663 -TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTL 720
             G  ++         GS  Y  PE F  ++    + DV+S GV+L+ +V        +L
Sbjct: 165 TVGNKLD------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SL 212
Query: 721 PKDQINLAD 729
           P D  NL +
Sbjct: 213 PFDGQNLKE 221

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 26/189 (13%)
Query: 546 NPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG-SD 604
           NP S Q L     E+ ++  L H ++V L    + +  + L+ EY + G +  +L     
Sbjct: 51  NPTSLQKLFR---EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR 107
Query: 605 LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK-- 662
           +     + +    + A +  H      ++ I+HRD+K  N+LLD +   K++DFG S   
Sbjct: 108 MKEKEARSKFRQIVSAVQYCH------QKRIVHRDLKAENLLLDADMNIKIADFGFSNEF 161
Query: 663 -TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTL 720
             G  ++         GS  Y  PE F  ++    + DV+S GV+L+ +V        +L
Sbjct: 162 TVGGKLD------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SL 209
Query: 721 PKDQINLAD 729
           P D  NL +
Sbjct: 210 PFDGQNLKE 218

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 27/182 (14%)
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           +   + L +LH+  +  +IHRDVK +N+L++     KM DFG+S          +    K
Sbjct: 116 VSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCK 173
Query: 678 GSFGYLDPEY----FWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMK 733
               Y+ PE       ++  + KSD++S G+ + E+   R       P D      W   
Sbjct: 174 ---PYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR------FPYDS-----WGTP 219
Query: 734 WQKQRSLKSIIDPHLKGN-YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH 792
           +Q+ + +     P L  + +S E    F +   +CL    K RPT  E++ H  +   LH
Sbjct: 220 FQQLKQVVEEPSPQLPADKFSAE----FVDFTSQCLKKNSKERPTYPELMQHPFFT--LH 273
Query: 793 EA 794
           E+
Sbjct: 274 ES 275

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 23/226 (10%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+++L +    ++V   G      E+ +  E+M  G+L   L  +   P     ++   I
Sbjct: 57  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS--I 114
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL YL    +  I+HRDVK +NIL++     K+ DFG+S  G  ++   ++    G
Sbjct: 115 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLID--EMANEFVG 168
Query: 679 SFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR 738
           +  Y+ PE       + +SD++S G+ L E+   R    P  P     L D+ +      
Sbjct: 169 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY---PRPPMAIFELLDYIVN----- 220
Query: 739 SLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                 +P  K   +  SLE F +   KCL      R  + +++ H
Sbjct: 221 ------EPPPKLPSAVFSLE-FQDFVNKCLIKNPAERADLKQLMVH 259

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 43/207 (20%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRH-------------RHLVSLIGFCDEQN 582
           D    AIK+    +E+ L+   +E+ +L+ L H             R+ V  +    +++
Sbjct: 30  DSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKS 88
Query: 583 EMILVYEYMANGTLRSHLFGSDLPPL------TWKQRLDACIGAARGLHYLHTGAERGII 636
            + +  EY  NGTL   +   +L          ++Q L+A       L Y+H+   +GII
Sbjct: 89  TLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEA-------LSYIHS---QGII 138
Query: 637 HRDVKTTNILLDENFVAKMSDFGLSK-TGPSMEHTHVS-----------TAVKGSFGYLD 684
           HRD+K  NI +DE+   K+ DFGL+K    S++   +            T+  G+  Y+ 
Sbjct: 139 HRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVA 198
Query: 685 PEYF-WRQQLTEKSDVYSFGVVLFEVV 710
            E         EK D+YS G++ FE++
Sbjct: 199 TEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 65  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS----- 118
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 119 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 67  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS----- 120
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 121 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 175
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 176 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 217

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 16/172 (9%)
Query: 547 PQSEQGLA-EFETEIEMLSKLR---HRHLVSLIGFC-----DEQNEMILVYEYMANGTLR 597
           P  E+GL      E+ +L +L    H ++V L+  C     D + ++ LV+E++ +  LR
Sbjct: 40  PNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLR 98
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           ++L  +  P L  +   D      RGL +LH      I+HRD+K  NIL+      K++D
Sbjct: 99  TYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLAD 155
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           FGL++      +      V  +  Y  PE   +       D++S G +  E+
Sbjct: 156 FGLARI---YSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 70  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS----- 123
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 124 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 66  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS----- 119
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 120 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 64  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS----- 117
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 118 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 172
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 173 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 214

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 63  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS----- 116
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 117 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 26/184 (14%)
Query: 547 PQSEQGLAEFETEIEMLSKLRHRHLVSLIGF----CDEQNEMILVYEYMANGTLRSHLFG 602
           P  ++   + E EI     ++H +L+  I       + + E+ L+  +   G+L  +L G
Sbjct: 47  PLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKG 106
Query: 603 SDLPPLTWKQRLDACIGAARGLHYLHT--------GAERGIIHRDVKTTNILLDENFVAK 654
           + +   TW +        +RGL YLH         G +  I HRD K+ N+LL  +  A 
Sbjct: 107 NII---TWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAV 163
Query: 655 MSDFGLS---KTGPSMEHTHVSTAVKGSFGYLDPEYF-----WRQQLTEKSDVYSFGVVL 706
           ++DFGL+   + G     TH      G+  Y+ PE       +++    + D+Y+ G+VL
Sbjct: 164 LADFGLAVRFEPGKPPGDTHGQV---GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVL 220
Query: 707 FEVV 710
           +E+V
Sbjct: 221 WELV 224

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 114/247 (46%), Gaps = 26/247 (10%)
Query: 540 AAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSH 599
            AI++ N Q +        EI ++ + ++ ++V+ +      +E+ +V EY+A G+L   
Sbjct: 48  VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 107
Query: 600 LFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG 659
           +  +    +   Q    C    + L +LH+     +IHRD+K+ NILL  +   K++DFG
Sbjct: 108 VTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFG 161
Query: 660 L-SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINP 718
             ++  P  E +  S  V G+  ++ PE   R+    K D++S G++  E++       P
Sbjct: 162 FCAQITP--EQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP---P 215
Query: 719 TLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEK-FGEIAEKCLDDEGKNRPT 777
            L ++ +            R+L  I         +PE L   F +   +CL+ + + R +
Sbjct: 216 YLNENPL------------RALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGS 263
Query: 778 MGEVLWH 784
             E+L H
Sbjct: 264 AKELLQH 270

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 64  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGXLLDYVREHKDNIGS----- 117
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 118 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 172
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 173 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 214

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 65  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 118
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 119 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 63  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 116
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 117 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 88  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 141
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 142 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 196
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 197 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 238

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 63  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 116
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 117 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 63  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 116
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 117 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 66  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 119
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 120 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 88/172 (51%), Gaps = 10/172 (5%)
Query: 540 AAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSH 599
            AI++ N Q +        EI ++ + ++ ++V+ +      +E+ +V EY+A G+L   
Sbjct: 49  VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 108
Query: 600 LFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG 659
           +  +    +   Q    C    + L +LH+     +IHR++K+ NILL  +   K++DFG
Sbjct: 109 VTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRNIKSDNILLGMDGSVKLTDFG 162
Query: 660 L-SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             ++  P  E +  ST V G+  ++ PE   R+    K D++S G++  E++
Sbjct: 163 FCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 211

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 66  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 119
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 120 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 16/172 (9%)
Query: 547 PQSEQGLA-EFETEIEMLSKLR---HRHLVSLIGFC-----DEQNEMILVYEYMANGTLR 597
           P  E+GL      E+ +L +L    H ++V L+  C     D + ++ LV+E++ +  LR
Sbjct: 40  PNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLR 98
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD 657
           ++L  +  P L  +   D      RGL +LH      I+HRD+K  NIL+      K++D
Sbjct: 99  TYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLAD 155
Query: 658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           FGL++      +      V  +  Y  PE   +       D++S G +  E+
Sbjct: 156 FGLARI---YSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 70  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 123
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 124 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 70  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 123
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 124 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 73  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 126
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 127 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 181
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 182 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 223

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 66  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 119
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 120 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG-SDLPPLTWK 611
           L +   E+ ++  L H ++V L    + +  + LV EY + G +  +L     +     +
Sbjct: 57  LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 612 QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH 671
            +    + A +  H      ++ I+HRD+K  N+LLD +   K++DFG S         +
Sbjct: 117 AKFRQIVSAVQYCH------QKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGN 167
Query: 672 VSTAVKGSFGYLDPEYFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
              A  G+  Y  PE F  ++    + DV+S GV+L+ +V        +LP D  NL +
Sbjct: 168 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 10/172 (5%)
Query: 540 AAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSH 599
            AI++ N Q +        EI ++ + ++ ++V+ +      +E+ +V EY+A G+L   
Sbjct: 49  VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 108
Query: 600 LFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG 659
           +  +    +   Q    C    + L +LH+     +IHRD+K+ NILL  +   K++DFG
Sbjct: 109 VTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFG 162
Query: 660 L-SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             ++  P  E +  S  V G+  ++ PE   R+    K D++S G++  E++
Sbjct: 163 FCAQITP--EQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 211

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 34/236 (14%)
Query: 558 TEIEMLSKLRHRHLVSLIG-FCDEQNEMI-LVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           +E+ +L +L+H ++V       D  N  + +V EY   G L S +          +Q LD
Sbjct: 54  SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT----KERQYLD 109
Query: 616 ------ACIGAARGLHYLHTGAERG--IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM 667
                         L   H  ++ G  ++HRD+K  N+ LD     K+ DFGL++    +
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI---L 166
Query: 668 EH-THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN 726
            H T  +    G+  Y+ PE   R    EKSD++S G +L+E+    A++ P     Q  
Sbjct: 167 NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC---ALMPPFTAFSQKE 223
Query: 727 LADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
           LA    + + +R         +   YS E      EI  + L+ +  +RP++ E+L
Sbjct: 224 LAGKIREGKFRR---------IPYRYSDE----LNEIITRMLNLKDYHRPSVEEIL 266

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 63  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGXLLDYVREHKDNIGS----- 116
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 117 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 57  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 110
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 111 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 207

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 31/236 (13%)
Query: 540 AAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT--- 595
            A+K     SE+G       EI ++ +L+H ++V L      +N++ LV+E+M N     
Sbjct: 33  VALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKY 92
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
           + S   G+    L             +GL + H   E  I+HRD+K  N+L+++    K+
Sbjct: 93  MDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKL 149
Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKS-DVYSFGVVLFEVVCARA 714
            DFGL++      +T  S  V  +  Y  P+     +    S D++S G +L E++  + 
Sbjct: 150 GDFGLARAFGIPVNTFSSEVV--TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKP 207
Query: 715 VINPTLPKDQINL----------ADWA-----------MKWQKQRSLKSIIDPHLK 749
           +   T  ++Q+ L          + W            ++ +  R L+ ++ PH K
Sbjct: 208 LFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTK 263

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 69  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 122
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 123 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 177
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 178 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 219

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 18/155 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+ +L  L H +++ L  F +++    LV E    G     LF   +  + + + +DA +
Sbjct: 86  EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG----ELFDEIIHRMKFNE-VDAAV 140
Query: 619 ---GAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGLSKTGPSMEHTHV 672
                  G+ YLH   +  I+HRD+K  N+LL+   ++ + K+ DFGLS      E+   
Sbjct: 141 IIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV---FENQKK 194
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
                G+  Y+ PE   R++  EK DV+S GV+LF
Sbjct: 195 MKERLGTAYYIAPEVL-RKKYDEKCDVWSIGVILF 228

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 97  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 150
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 151 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 205
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 206 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 247

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKXQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+++L +    ++V   G      E+ +  E+M  G+L   L  +   P     ++   I
Sbjct: 73  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS--I 130
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHVSTAVK 677
              +GL YL    +  I+HRDVK +NIL++     K+ DFG+S +   SM ++ V     
Sbjct: 131 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----- 183
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVI 716
           G+  Y+ PE       + +SD++S G+ L E+   R  I
Sbjct: 184 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 15/178 (8%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           L +   E+ ++  L H ++V L    + +  + LV EY + G +  +L         W +
Sbjct: 50  LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-----WMK 104
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
             +A     + +  +    ++ I+HRD+K  N+LLD +   K++DFG S         + 
Sbjct: 105 EKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNK 161
Query: 673 STAVKGSFGYLDPEYFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
                GS  Y  PE F  ++    + DV+S GV+L+ +V        +LP D  NL +
Sbjct: 162 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 213

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG-SDLPPLTWK 611
           L +   E+ ++  L H ++V L    + +  + LV EY + G +  +L     +     +
Sbjct: 57  LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 612 QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH 671
            +    + A +  H      ++ I+HRD+K  N+LLD +   K++DFG S         +
Sbjct: 117 AKFRQIVSAVQYCH------QKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGN 167
Query: 672 VSTAVKGSFGYLDPEYFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
                 GS  Y  PE F  ++    + DV+S GV+L+ +V        +LP D  NL +
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG-SDLPPLTWK 611
           L +   E+ ++  L H ++V L    + +  + LV EY + G +  +L     +     +
Sbjct: 57  LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 612 QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH 671
            +    + A +  H      ++ I+HRD+K  N+LLD +   K++DFG S         +
Sbjct: 117 AKFRQIVSAVQYCH------QKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGN 167
Query: 672 VSTAVKGSFGYLDPEYFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
                 GS  Y  PE F  ++    + DV+S GV+L+ +V        +LP D  NL +
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG-SDLPPLTWK 611
           L +   E+ ++  L H ++V L    + +  + LV EY + G +  +L     +     +
Sbjct: 57  LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 612 QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH 671
            +    + A +  H      ++ I+HRD+K  N+LLD +   K++DFG S         +
Sbjct: 117 AKFRQIVSAVQYCH------QKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGN 167
Query: 672 VSTAVKGSFGYLDPEYFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
                 GS  Y  PE F  ++    + DV+S GV+L+ +V        +LP D  NL +
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 52  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHTHVSTAV 676
              +GL + H+     ++HRD+K  N+L++     K++DFGL++    P   +TH     
Sbjct: 111 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 165
Query: 677 KGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCARAV 715
             +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 166 --TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRAL 203

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKXQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 59  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHTHVSTAV 676
              +GL + H+     ++HRD+K  N+L++     K++DFGL++    P   +TH     
Sbjct: 118 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 172
Query: 677 KGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCARAV 715
             +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 173 --TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRAL 210

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 94  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 149
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 150 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYV 206
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 207 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 257

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 122/296 (41%), Gaps = 49/296 (16%)
Query: 539 LAAIKRANPQSEQGL-AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
           L A+K    + E+G       E+ +L  L+H ++V+L      +  + LV+EY+      
Sbjct: 29  LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL------ 82
Query: 598 SHLFGSDLPPLTWKQRLDAC-------------IGAARGLHYLHTGAERGIIHRDVKTTN 644
                 DL     KQ LD C                 RGL Y H    + ++HRD+K  N
Sbjct: 83  ----DKDL-----KQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQN 130
Query: 645 ILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW-RQQLTEKSDVYSFG 703
           +L++E    K++DFGL++       T+ +  V  +  Y  P+        + + D++  G
Sbjct: 131 LLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTDYSTQIDMWGVG 188
Query: 704 VVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID---------PHLKG---- 750
            + +E+   R +   +  ++Q++     +    + +   I+          P  +     
Sbjct: 189 CIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALL 248
Query: 751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFS 806
           +++P       ++  K L  EG+NR +  + + H  + L L E   +  D  + F+
Sbjct: 249 SHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH-PFFLSLGERIHKLPDTTSIFA 303

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 20/168 (11%)
Query: 552 GLAEFETEIEMLSKLRHRHLVSLIG--FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLT 609
           G A  + EI++L +LRH++++ L+   + +E+ +M +V EY   G     +  S      
Sbjct: 49  GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM--QEMLDS-----V 101
Query: 610 WKQRLDACIGAAR------GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT 663
            ++R   C           GL YLH+   +GI+H+D+K  N+LL      K+S  G+++ 
Sbjct: 102 PEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEA 158
Query: 664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTE--KSDVYSFGVVLFEV 709
                        +GS  +  PE           K D++S GV L+ +
Sbjct: 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNI 206

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L++ +  S L  +          
Sbjct: 55  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLF 113
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 78  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 133
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        H 
Sbjct: 134 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR--------HT 182
Query: 673 STAVKGSFG---YLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +  + G      Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 78  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 133
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        H 
Sbjct: 134 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR--------HT 182
Query: 673 STAVKGSFG---YLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +  + G      Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 76  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 131
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 132 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV 188
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 189 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 60  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 113
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A G++YL    +R ++HRD+   N+L+      K++DFGL+K   + E
Sbjct: 114 --QYLLNWCVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 168
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 169 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 210

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG-SDLPPLTWK 611
           L +   E+ ++  L H ++V L    + +  + LV EY + G +  +L     +     +
Sbjct: 57  LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 612 QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH 671
            +    + A +  H      ++ I+HRD+K  N+LLD +   K++DFG S         +
Sbjct: 117 AKFRQIVSAVQYCH------QKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGN 167
Query: 672 VSTAVKGSFGYLDPEYFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
                 GS  Y  PE F  ++    + DV+S GV+L+ +V        +LP D  NL +
Sbjct: 168 KLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 52  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHTHVSTAV 676
              +GL + H+     ++HRD+K  N+L++     K++DFGL++    P   +TH     
Sbjct: 111 QLLQGLSFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 165
Query: 677 KGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
             +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 82  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 137
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 138 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV 194
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 195 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 245

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 78  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 133
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        H 
Sbjct: 134 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR--------HT 182
Query: 673 STAVKGSFG---YLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +  + G      Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 110/230 (47%), Gaps = 32/230 (13%)
Query: 559 EIEMLSKLR-HRHLVSLIGF--CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           EI +L++L  H ++V+L+     D   ++ LV++YM    L + +  + L P+  +  + 
Sbjct: 58  EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETD-LHAVIRANILEPVHKQYVVY 116
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM-------- 667
             I   +   YLH+G   G++HRD+K +NILL+     K++DFGLS++  ++        
Sbjct: 117 QLIKVIK---YLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIP 170
Query: 668 ----EHTH-------VSTAVKGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCARAV 715
               E+T        + T    +  Y  PE      + T+  D++S G +L E++C + +
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAE 765
              +   +Q+      + +     ++SI  P  K     ESL++  EI +
Sbjct: 231 FPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMI--ESLKEKVEIRQ 278

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 76  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 131
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 132 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV 188
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 189 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 59  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHTHVSTAV 676
              +GL + H+     ++HRD+K  N+L++     K++DFGL++    P   +TH     
Sbjct: 118 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 172
Query: 677 KGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
             +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 173 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 210

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 53  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHTHVSTAV 676
              +GL + H+     ++HRD+K  N+L++     K++DFGL++    P   +TH     
Sbjct: 112 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 166
Query: 677 KGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
             +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 51  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHTHVSTAV 676
              +GL + H+     ++HRD+K  N+L++     K++DFGL++    P   +TH     
Sbjct: 110 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 164
Query: 677 KGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
             +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 165 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 17/161 (10%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ---RLD 615
           E++++  L H  LV+L     ++ +M +V + +  G LR HL  +    + +K+   +L 
Sbjct: 65  ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN----VHFKEETVKLF 120
Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
            C      L YL     + IIHRD+K  NILLDE+    ++DF ++   P    T ++T 
Sbjct: 121 IC-ELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP--RETQITT- 173
Query: 676 VKGSFGYLDPEYFWRQQLTEKS---DVYSFGVVLFEVVCAR 713
           + G+  Y+ PE F  ++    S   D +S GV  +E++  R
Sbjct: 174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 83  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 138
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 139 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 195
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 196 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSF 680
            +G+ Y+H+   + +IHRD+K +NI L +    K+ DFGL     S+++    T  KG+ 
Sbjct: 146 TKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLV---TSLKNDGKRTRSKGTL 199
Query: 681 GYLDPEYFWRQQLTEKSDVYSFGVVLFEV--VCARA 714
            Y+ PE    Q   ++ D+Y+ G++L E+  VC  A
Sbjct: 200 RYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA 235

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        H 
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR--------HT 175
Query: 673 STAVKGSFG---YLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
              + G      Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 176 DDEMTGXVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 83  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 138
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 139 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 195
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 196 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 110/267 (41%), Gaps = 33/267 (12%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC----DEQNEMILVYEYM 591
           D    A+KR     +Q   E + E +M     H +++ L+ +C      ++E  L+  + 
Sbjct: 53  DGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFF 112
Query: 592 ANGTLRSHL--FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE 649
             GTL + +         LT  Q L   +G  RGL  +H    +G  HRD+K TNILL +
Sbjct: 113 KRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGD 169
Query: 650 NFVAKMSDFG-LSKTGPSMEHTHVS------TAVKGSFGYLDPEYFWRQQ---LTEKSDV 699
                + D G +++    +E +  +       A + +  Y  PE F  Q    + E++DV
Sbjct: 170 EGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDV 229
Query: 700 YSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEK 759
           +S G VL+ ++          P D        M +QK  S+   +   L    SP     
Sbjct: 230 WSLGCVLYAMMFGEG------PYD--------MVFQKGDSVALAVQNQLSIPQSPRHSSA 275
Query: 760 FGEIAEKCLDDEGKNRPTMGEVLWHLE 786
             ++    +  +   RP +  +L  LE
Sbjct: 276 LWQLLNSMMTVDPHQRPHIPLLLSQLE 302

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 83  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 138
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 139 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 195
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 196 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 78  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 133
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 134 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 190
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 191 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 82  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 137
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 138 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 194
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 195 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 245

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 52  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHTHVSTAV 676
              +GL + H+     ++HRD+K  N+L++     K++DFGL++    P   +TH     
Sbjct: 111 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 165
Query: 677 KGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
             +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 51  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHTHVSTAV 676
              +GL + H+     ++HRD+K  N+L++     K++DFGL++    P   +TH     
Sbjct: 110 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 164
Query: 677 KGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
             +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 165 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 52  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHTHVSTAV 676
              +GL + H+     ++HRD+K  N+L++     K++DFGL++    P   +TH     
Sbjct: 111 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 165
Query: 677 KGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
             +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 51  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHTHVSTAV 676
              +GL + H+     ++HRD+K  N+L++     K++DFGL++    P   +TH     
Sbjct: 110 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 164
Query: 677 KGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
             +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 165 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 52  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHTHVSTAV 676
              +GL + H+     ++HRD+K  N+L++     K++DFGL++    P   +TH     
Sbjct: 111 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 165
Query: 677 KGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
             +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 73  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 128
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 129 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 185
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 186 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 76  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 131
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 132 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 188
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 189 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 67  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 122
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 123 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 179
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 180 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 70  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 125
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 126 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 182
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 183 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 233

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 54  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 113 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 167
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 91  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 146
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        H 
Sbjct: 147 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR--------HT 195
Query: 673 STAVKGSFG---YLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
              + G      Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 196 DDEMXGXVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 68  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 123
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 124 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 180
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 181 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 231

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKSQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL +        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 73  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 128
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 129 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 185
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 186 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 68  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 123
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 124 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 180
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 181 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 231

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 52  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 111 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 56  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 115 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 169
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 207

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 69  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 124
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 125 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 181
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 182 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 232

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 52  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 111 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 56  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHTHVSTAV 676
              +GL + H+     ++HRD+K  N+L++     K++DFGL++    P   +TH     
Sbjct: 115 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 169
Query: 677 KGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
             +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 170 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 207

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 55  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 73  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 128
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 129 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 185
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 186 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 81  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 136
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 137 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 193
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 194 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 244

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 55  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 54  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 113 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 167
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 54  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 113 QLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 167
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 52  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 111 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 67  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 122
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 123 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 179
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 180 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E+++   L+  +  S L  +          
Sbjct: 54  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYLF 112
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 113 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 167
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE         +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 53  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 112 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 166
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 91  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 146
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 147 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 203
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 204 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 73  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 128
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 129 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV 185
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 186 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 79/151 (52%), Gaps = 9/151 (5%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA 616
           + EI ++++L H  L++L    +++ EM+L+ E+++ G L   +   D   ++  + ++ 
Sbjct: 96  KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY-KMSEAEVINY 154
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA--KMSDFGLSKTGPSMEHTHVST 674
              A  GL ++H   E  I+H D+K  NI+ +    +  K+ DFGL+      E   V+T
Sbjct: 155 MRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT 211
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVV 705
           A   +  +  PE   R+ +   +D+++ GV+
Sbjct: 212 A---TAEFAAPEIVDREPVGFYTDMWAIGVL 239

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E+++   L+  +  S L  +          
Sbjct: 55  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYLF 113
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 53  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 112 QLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 166
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 52  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 111 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L++ +  S L  +          
Sbjct: 51  EISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLF 109
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHTHVSTAV 676
              +GL + H+     ++HRD+K  N+L++     K++DFGL++    P   +TH     
Sbjct: 110 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 164
Query: 677 KGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
             +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 165 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 53  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 112 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 166
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 94  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 149
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 150 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 206
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 207 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 257

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 51  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 110 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 164
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 27/242 (11%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +F +E  ++  L H H+V LIG  +E+   I++ E    G L  H    +   L     +
Sbjct: 71  KFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGEL-GHYLERNKNSLKVLTLV 128
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
              +   + + YL +      +HRD+   NIL+      K+ DFGLS+     E  + ++
Sbjct: 129 LYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIED-EDYYKAS 184
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
             +    ++ PE    ++ T  SDV+ F V ++E+               ++       W
Sbjct: 185 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI---------------LSFGKQPFFW 229
Query: 735 QKQRSLKSIIDPHLKGNYSPE---SLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL 791
            + + +  +++   KG+  P+          +  +C D +  +RP   E++  L  V Q+
Sbjct: 230 LENKDVIGVLE---KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 286
Query: 792 HE 793
            +
Sbjct: 287 EK 288

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 90  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 145
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 146 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 202
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 203 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 253

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E+++   L+  +  S L  +          
Sbjct: 53  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIKSYLF 111
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 112 QLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 166
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E+++   L+  +  S L  +          
Sbjct: 55  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIKSYLF 113
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 77  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 132
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 133 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 189
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 190 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           E   E  +++ +   ++  L+G C   + + LV + M  G L  H+   +   L  +  L
Sbjct: 65  EILDEAYVMAGVGSPYVSRLLGIC-LTSTVQLVTQLMPYGCLLDHV-RENRGRLGSQDLL 122
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
           + C+  A+G+ YL    +  ++HRD+   N+L+      K++DFGL++     E  + + 
Sbjct: 123 NWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHAD 179
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             K    ++  E   R++ T +SDV+S+GV ++E++
Sbjct: 180 GGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELM 215

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 76  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 131
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 132 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 188
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 189 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 91  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 146
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 147 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 203
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 204 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 90  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 145
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 146 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 202
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 203 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 253

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 52  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLF 110
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 111 QLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 51  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 110 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 164
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           S +   + E E  +  KL+H ++V L     E++   LV++ +  G L   +   +    
Sbjct: 68  SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE---- 123
Query: 609 TWKQRLDA--CIGAA-RGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGLSK 662
            +    DA  CI      + Y H+    GI+HR++K  N+LL    +    K++DFGL+ 
Sbjct: 124 -FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179
Query: 663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
                E  H      G+ GYL PE   +   ++  D+++ GV+L+
Sbjct: 180 EVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 221

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK---TGPSMEHTHVSTAVKG 678
           RGL Y+H+     +IHRD+K +N+L++EN   K+ DFG+++   T P+ EH +  T    
Sbjct: 170 RGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA-EHQYFMTEYVA 225
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE      + T+  D++S G +  E++  R +
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 263

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 77  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 132
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 133 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV 189
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 190 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 38/180 (21%)
Query: 633 RGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ 691
           RG++HRD+K  NIL+D     AK+ DFG      ++ H    T   G+  Y  PE+  R 
Sbjct: 158 RGVVHRDIKDENILIDLRRGCAKLIDFGSG----ALLHDEPYTDFDGTRVYSPPEWISRH 213
Query: 692 QLTE-KSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG 750
           Q     + V+S G++L+++VC                       + Q  L++ +  H   
Sbjct: 214 QYHALPATVWSLGILLYDMVCGDIPFE-----------------RDQEILEAEL--HFPA 254
Query: 751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQA 810
           + SP+       +  +CL  +  +RP++ E+L          + WM+T       + S+ 
Sbjct: 255 HVSPDCC----ALIRRCLAPKPSSRPSLEEILL---------DPWMQTPAEDVPLNPSKG 301

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 65  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS----- 118
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFG +K   + E
Sbjct: 119 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 65  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS----- 118
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFG +K   + E
Sbjct: 119 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 27/242 (11%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +F +E  ++  L H H+V LIG  +E+   I++ E    G L  H    +   L     +
Sbjct: 59  KFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGEL-GHYLERNKNSLKVLTLV 116
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
              +   + + YL +      +HRD+   NIL+      K+ DFGLS+     E  + ++
Sbjct: 117 LYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIED-EDYYKAS 172
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
             +    ++ PE    ++ T  SDV+ F V ++E+               ++       W
Sbjct: 173 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI---------------LSFGKQPFFW 217
Query: 735 QKQRSLKSIIDPHLKGNYSPE---SLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL 791
            + + +  +++   KG+  P+          +  +C D +  +RP   E++  L  V Q+
Sbjct: 218 LENKDVIGVLE---KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274
Query: 792 HE 793
            +
Sbjct: 275 EK 276

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 22/167 (13%)
Query: 566 LRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWKQRLDACIGA 620
           LRH ++V           + ++ EY + G L   +     F  D     ++Q L      
Sbjct: 73  LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS----- 127
Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVA--KMSDFGLSKTGPSMEHTHVSTAVKG 678
             G+ Y H+     I HRD+K  N LLD +     K+ DFG SK+  S+ H+   + V G
Sbjct: 128 --GVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKS--SVLHSQPKSTV-G 179
Query: 679 SFGYLDPEYFWRQQLTEK-SDVYSFGVVLF-EVVCARAVINPTLPKD 723
           +  Y+ PE   RQ+   K +DV+S GV L+  +V A    +P  P+D
Sbjct: 180 TPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD 226

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 17/174 (9%)
Query: 540 AAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSH 599
           A I      S +   + E E  +  KL+H ++V L     E++   LV++ +  G L   
Sbjct: 36  AKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFED 95
Query: 600 LFGSDLPPLTWKQRLDA--CIGAA-RGLHYLHTGAERGIIHRDVKTTNILLD---ENFVA 653
           +   +     +    DA  CI      + Y H+    GI+HR++K  N+LL    +    
Sbjct: 96  IVARE-----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAV 147
Query: 654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
           K++DFGL+      E  H      G+ GYL PE   +   ++  D+++ GV+L+
Sbjct: 148 KLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 198

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 17/174 (9%)
Query: 540 AAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSH 599
           A I      S +   + E E  +  KL+H ++V L     E++   LV++ +  G L   
Sbjct: 36  AKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFED 95
Query: 600 LFGSDLPPLTWKQRLDA--CIGAA-RGLHYLHTGAERGIIHRDVKTTNILLD---ENFVA 653
           +   +     +    DA  CI      + Y H+    GI+HR++K  N+LL    +    
Sbjct: 96  IVARE-----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAV 147
Query: 654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
           K++DFGL+      E  H      G+ GYL PE   +   ++  D+++ GV+L+
Sbjct: 148 KLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 198

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 27/242 (11%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +F +E  ++  L H H+V LIG  +E+   I++ E    G L  H    +   L     +
Sbjct: 55  KFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGEL-GHYLERNKNSLKVLTLV 112
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
              +   + + YL +      +HRD+   NIL+      K+ DFGLS+     E  + ++
Sbjct: 113 LYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIED-EDYYKAS 168
Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW 734
             +    ++ PE    ++ T  SDV+ F V ++E+               ++       W
Sbjct: 169 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI---------------LSFGKQPFFW 213
Query: 735 QKQRSLKSIIDPHLKGNYSPE---SLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL 791
            + + +  +++   KG+  P+          +  +C D +  +RP   E++  L  V Q+
Sbjct: 214 LENKDVIGVLE---KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 270
Query: 792 HE 793
            +
Sbjct: 271 EK 272

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 17/174 (9%)
Query: 540 AAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSH 599
           A I      S +   + E E  +  KL+H ++V L     E++   LV++ +  G L   
Sbjct: 35  AKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFED 94
Query: 600 LFGSDLPPLTWKQRLDA--CIGAA-RGLHYLHTGAERGIIHRDVKTTNILLD---ENFVA 653
           +   +     +    DA  CI      + Y H+    GI+HR++K  N+LL    +    
Sbjct: 95  IVARE-----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAV 146
Query: 654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
           K++DFGL+      E  H      G+ GYL PE   +   ++  D+++ GV+L+
Sbjct: 147 KLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 197

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        H 
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR--------HT 175
Query: 673 STAVKGSFG---YLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
              + G      Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 176 DDEMAGFVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 67  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 122
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        H 
Sbjct: 123 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR--------HT 171
Query: 673 STAVKGSFG---YLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
              + G      Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 172 DDEMAGFVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        H 
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR--------HT 175
Query: 673 STAVKGSFG---YLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
              + G      Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 176 DDEMAGFVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 77  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 132
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 133 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 189
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 190 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 77  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 132
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        H 
Sbjct: 133 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR--------HT 181
Query: 673 STAVKGSFG---YLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
              + G      Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 43/207 (20%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRH-------------RHLVSLIGFCDEQN 582
           D    AIK+    +E+ L+   +E+ +L+ L H             R+ V  +    +++
Sbjct: 30  DSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKS 88
Query: 583 EMILVYEYMANGTLRSHLFGSDLPPL------TWKQRLDACIGAARGLHYLHTGAERGII 636
            + +  EY  N TL   +   +L          ++Q L+A       L Y+H+   +GII
Sbjct: 89  TLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEA-------LSYIHS---QGII 138
Query: 637 HRDVKTTNILLDENFVAKMSDFGLSK-TGPSMEHTHVS-----------TAVKGSFGYLD 684
           HRD+K  NI +DE+   K+ DFGL+K    S++   +            T+  G+  Y+ 
Sbjct: 139 HRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVA 198
Query: 685 PEYF-WRQQLTEKSDVYSFGVVLFEVV 710
            E         EK D+YS G++ FE++
Sbjct: 199 TEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK---TGPSMEHTHVSTAVKG 678
           RGL Y+H+     +IHRD+K +N+L++EN   K+ DFG+++   T P+ EH +  T    
Sbjct: 169 RGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA-EHQYFMTEYVA 224
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE      + T+  D++S G +  E++  R +
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 262

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 67  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS----- 120
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFG +K   + E
Sbjct: 121 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 175
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 176 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 217

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 65  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 118
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFG +K   + E
Sbjct: 119 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 34/236 (14%)
Query: 558 TEIEMLSKLRHRHLVSLIG-FCDEQNEMI-LVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           +E+ +L +L+H ++V       D  N  + +V EY   G L S +          +Q LD
Sbjct: 54  SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT----KERQYLD 109
Query: 616 ------ACIGAARGLHYLHTGAERG--IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM 667
                         L   H  ++ G  ++HRD+K  N+ LD     K+ DFGL++    +
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI---L 166
Query: 668 EHTH-VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN 726
            H    +    G+  Y+ PE   R    EKSD++S G +L+E+    A++ P     Q  
Sbjct: 167 NHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC---ALMPPFTAFSQKE 223
Query: 727 LADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
           LA    + + +R         +   YS E      EI  + L+ +  +RP++ E+L
Sbjct: 224 LAGKIREGKFRR---------IPYRYSDE----LNEIITRMLNLKDYHRPSVEEIL 266

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L H ++V L+     +N++ LV+E++ +  L+  +  S L  +          
Sbjct: 55  EISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              +GL + H+     ++HRD+K  N+L++     K++DFGL++       T+    V  
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 679 SFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAV 715
           +  Y  PE     +  +   D++S G +  E+V  RA+
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 63  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 116
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFG +K   + E
Sbjct: 117 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 171
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 17/178 (9%)
Query: 540 AAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
            A+K   P      + + +F  E+  +  L HR+L+ L G       M +V E    G+L
Sbjct: 43  VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSL 101
Query: 597 ----RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV 652
               R H     L  L+        +  A G+ YL +   +  IHRD+   N+LL    +
Sbjct: 102 LDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDL 153
Query: 653 AKMSDFGLSKTGPSM-EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
            K+ DFGL +  P   +H  +    K  F +  PE    +  +  SD + FGV L+E+
Sbjct: 154 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 211

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL------FGSDLPPL 608
           E   E  +++ + + H+  L+G C   + + L+ + M  G L  ++       GS     
Sbjct: 70  EILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS----- 123
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
             +  L+ C+  A+G++YL    +R ++HRD+   N+L+      K++DFG +K   + E
Sbjct: 124 --QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 178
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             + +   K    ++  E    +  T +SDV+S+GV ++E++
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 17/178 (9%)
Query: 540 AAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
            A+K   P      + + +F  E+  +  L HR+L+ L G       M +V E    G+L
Sbjct: 39  VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSL 97
Query: 597 ----RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV 652
               R H     L  L+        +  A G+ YL +   +  IHRD+   N+LL    +
Sbjct: 98  LDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDL 149
Query: 653 AKMSDFGLSKTGPSM-EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
            K+ DFGL +  P   +H  +    K  F +  PE    +  +  SD + FGV L+E+
Sbjct: 150 VKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 13/135 (9%)
Query: 582 NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVK 641
           + +  V EY+  G L  H+    +      Q +      + GL +LH   +RGII+RD+K
Sbjct: 93  DRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISIGLFFLH---KRGIIYRDLK 147
Query: 642 TTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK---GSFGYLDPEYFWRQQLTEKSD 698
             N++LD     K++DFG+ K     EH       +   G+  Y+ PE    Q   +  D
Sbjct: 148 LDNVMLDSEGHIKIADFGMCK-----EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVD 202
Query: 699 VYSFGVVLFEVVCAR 713
            +++GV+L+E++  +
Sbjct: 203 WWAYGVLLYEMLAGQ 217

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 69/170 (40%), Gaps = 19/170 (11%)
Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY 687
           H      IIHRD+K +NILLD +   K+ DFG+S     +  +   T   G   Y+ PE 
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISG---QLVDSIAKTRDAGCRPYMAPER 196
Query: 688 F----WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI 743
                 RQ    +SDV+S G+ L+E+   R       PK       W   + +   +   
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRF----PYPK-------WNSVFDQLTQVVKG 245
Query: 744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE 793
             P L  +   E    F      CL  +   RP   E+L H  ++L   E
Sbjct: 246 DPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH-PFILMYEE 294

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 17/178 (9%)
Query: 540 AAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
            A+K   P      + + +F  E+  +  L HR+L+ L G       M +V E    G+L
Sbjct: 49  VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSL 107
Query: 597 ----RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV 652
               R H     L  L+        +  A G+ YL +   +  IHRD+   N+LL    +
Sbjct: 108 LDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDL 159
Query: 653 AKMSDFGLSKTGPSM-EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
            K+ DFGL +  P   +H  +    K  F +  PE    +  +  SD + FGV L+E+
Sbjct: 160 VKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 217

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 115/275 (41%), Gaps = 50/275 (18%)
Query: 548 QSEQGLAEFETEIEMLSKLRHRHLVSLIGF------CDEQNEMILVYEYMAN--GTLRSH 599
           QSE        E+ +L  +RH +++ L+         D+  +  LV  +M    G L  H
Sbjct: 63  QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH 122
Query: 600 -LFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF 658
              G D       Q L       +GL Y+H     GIIHRD+K  N+ ++E+   K+ DF
Sbjct: 123 EKLGEDRIQFLVYQML-------KGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 172
Query: 659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVI 716
           GL++   S     V T       Y  PE    W  + T+  D++S G ++ E++  + + 
Sbjct: 173 GLARQADSEMXGXVVTR-----WYRAPEVILNW-MRYTQTVDIWSVGCIMAEMITGKTLF 226
Query: 717 NPTLPKDQIN---------LADWAMKWQKQRS---LKSIIDPHLKG------NYSPESLE 758
             +   DQ+           A++  + Q   +   +K + +   K       N SP ++ 
Sbjct: 227 KGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAV- 285
Query: 759 KFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE 793
               + EK L  + + R T GE L H  Y   LH+
Sbjct: 286 ---NLLEKMLVLDAEQRVTAGEALAH-PYFESLHD 316

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ D+GL++        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 17/179 (9%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG-SDLPPLTWK 611
           L +   E+ +   L H ++V L    + +  + LV EY + G +  +L           +
Sbjct: 57  LQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEAR 116
Query: 612 QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH 671
            +    + A +  H      ++ I+HRD+K  N+LLD +   K++DFG S         +
Sbjct: 117 AKFRQIVSAVQYCH------QKFIVHRDLKAENLLLDADXNIKIADFGFSN---EFTFGN 167
Query: 672 VSTAVKGSFGYLDPEYFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
              A  G+  Y  PE F  ++    + DV+S GV+L+ +V        +LP D  NL +
Sbjct: 168 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 35/238 (14%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDE----QNEMILVYEYMANGTLRSHLFGSDLPPL--- 608
           F+ E E L  L+H ++V      +     +  ++LV E   +GTL+++L    +  +   
Sbjct: 72  FKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVL 131
Query: 609 -TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPS 666
            +W      C    +GL +LHT     IIHRD+K  NI +       K+ D GL+    +
Sbjct: 132 RSW------CRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLA----T 180
Query: 667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN 726
           ++    + AV G+  +  PE +  ++  E  DVY+FG    E   +    +      QI 
Sbjct: 181 LKRASFAKAVIGTPEFXAPEXY-EEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIY 239
Query: 727 LADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                      R + S + P    ++   ++ +  EI E C+      R ++ ++L H
Sbjct: 240 -----------RRVTSGVKP---ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 17/178 (9%)
Query: 540 AAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
            A+K   P      + + +F  E+  +  L HR+L+ L G       M +V E    G+L
Sbjct: 39  VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSL 97
Query: 597 ----RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV 652
               R H     L  L+        +  A G+ YL +   +  IHRD+   N+LL    +
Sbjct: 98  LDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDL 149
Query: 653 AKMSDFGLSKTGPSM-EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
            K+ DFGL +  P   +H  +    K  F +  PE    +  +  SD + FGV L+E+
Sbjct: 150 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 17/178 (9%)
Query: 540 AAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
            A+K   P      + + +F  E+  +  L HR+L+ L G       M +V E    G+L
Sbjct: 43  VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSL 101
Query: 597 ----RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV 652
               R H     L  L+        +  A G+ YL +   +  IHRD+   N+LL    +
Sbjct: 102 LDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDL 153
Query: 653 AKMSDFGLSKTGPSM-EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
            K+ DFGL +  P   +H  +    K  F +  PE    +  +  SD + FGV L+E+
Sbjct: 154 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 211

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 17/178 (9%)
Query: 540 AAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
            A+K   P      + + +F  E+  +  L HR+L+ L G       M +V E    G+L
Sbjct: 49  VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSL 107
Query: 597 ----RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV 652
               R H     L  L+        +  A G+ YL +   +  IHRD+   N+LL    +
Sbjct: 108 LDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDL 159
Query: 653 AKMSDFGLSKTGPSM-EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
            K+ DFGL +  P   +H  +    K  F +  PE    +  +  SD + FGV L+E+
Sbjct: 160 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 217

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI+ +S LRH  LV+L    ++ NEM+++YE+M+ G L   +   +   ++  + ++   
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMR 262
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILL--DENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
              +GL ++H   E   +H D+K  NI+     +   K+ DFGL+      +   V+T  
Sbjct: 263 QVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT-- 317
Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
            G+  +  PE    + +   +D++S GV+ +
Sbjct: 318 -GTAEFAAPEVAEGKPVGYYTDMWSVGVLSY 347

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 17/178 (9%)
Query: 540 AAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
            A+K   P      + + +F  E+  +  L HR+L+ L G       M +V E    G+L
Sbjct: 39  VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSL 97
Query: 597 ----RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV 652
               R H     L  L+        +  A G+ YL +   +  IHRD+   N+LL    +
Sbjct: 98  LDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDL 149
Query: 653 AKMSDFGLSKTGPSM-EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
            K+ DFGL +  P   +H  +    K  F +  PE    +  +  SD + FGV L+E+
Sbjct: 150 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 128/280 (45%), Gaps = 40/280 (14%)
Query: 543 KRANPQSEQGLA--EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           KR    S +G++  + E E+ +L +++H ++++L    + + ++IL+ E +A G L    
Sbjct: 45  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD-- 102
Query: 601 FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNI-LLDENFVA---KMS 656
           F ++   LT ++  +       G++YLH+     I H D+K  NI LLD N      K+ 
Sbjct: 103 FLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 159
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVI 716
           DFGL+     ++  +    + G+  ++ PE    + L  ++D++S GV+ + ++   +  
Sbjct: 160 DFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
Query: 717 NPTLPKDQINLADWAMKWQKQRSLKSI--IDPHLKGNYSPESLEKFGEIAEKCLDDEGKN 774
                     L D      KQ +L ++  ++   +  Y   +     +   + L  + K 
Sbjct: 217 ----------LGD-----TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKK 261
Query: 775 RPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEF 814
           R T+ + L H          W++  D Q + SS+ +  +F
Sbjct: 262 RMTIQDSLQH---------PWIKPKDTQQALSSAWSHPQF 292

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 27/244 (11%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQN----EMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           E EI     LRH +++  I   ++ N    ++ LV +Y  +G+L  +L   +   +T + 
Sbjct: 71  EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEG 127
Query: 613 RLDACIGAARGLHYLH-----TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM 667
            +   +  A GL +LH     T  +  I HRD+K+ NIL+ +N    ++D GL+    S 
Sbjct: 128 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 187
Query: 668 EHTHVSTAVKGSFG---YLDPEYF------WRQQLTEKSDVYSFGVVLFEVV--CARAVI 716
             T +  A     G   Y+ PE           +  +++D+Y+ G+V +E+   C+   I
Sbjct: 188 TDT-IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 246
Query: 717 NP--TLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY-SPESLEKFGEIAEKCLDDEGK 773
           +    LP   +  +D +++  ++   +  + P++   + S E+L    +I  +C    G 
Sbjct: 247 HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGA 306
Query: 774 NRPT 777
            R T
Sbjct: 307 ARLT 310

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 103/243 (42%), Gaps = 25/243 (10%)
Query: 557 ETEIEMLSKLRHRHLVSLIGF----CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           ETEI     +RH +++  I           ++ L+ +Y  NG+L  +L  + L     K 
Sbjct: 79  ETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDA---KS 135
Query: 613 RLDACIGAARGLHYLHT-----GAERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPS 666
            L     +  GL +LHT       +  I HRD+K+ NIL+ +N    ++D GL+ K    
Sbjct: 136 MLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISD 195
Query: 667 MEHTHVSTAVK-GSFGYLDPEYFWRQ------QLTEKSDVYSFGVVLFEV----VCARAV 715
                +    + G+  Y+ PE           Q    +D+YSFG++L+EV    V    V
Sbjct: 196 TNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIV 255
Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSP-ESLEKFGEIAEKCLDDEGKN 774
               LP   +  +D + +  ++      + P     +S  E L + G++  +C      +
Sbjct: 256 EEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPAS 315
Query: 775 RPT 777
           R T
Sbjct: 316 RLT 318

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 114/247 (46%), Gaps = 33/247 (13%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQN----EMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           E EI     LRH +++  I   ++ N    ++ LV +Y  +G+L  +L   +   +T + 
Sbjct: 46  EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEG 102
Query: 613 RLDACIGAARGLHYLH-----TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM 667
            +   +  A GL +LH     T  +  I HRD+K+ NIL+ +N    ++D GL+    S 
Sbjct: 103 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 162
Query: 668 EHTHVSTAVKGSFG---YLDPE---------YFWRQQLTEKSDVYSFGVVLFEVV--CAR 713
             T +  A     G   Y+ PE         +F   +  +++D+Y+ G+V +E+   C+ 
Sbjct: 163 TDT-IDIAPNHRVGTKRYMAPEVLDDSINMKHF---ESFKRADIYAMGLVFWEIARRCSI 218
Query: 714 AVINP--TLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY-SPESLEKFGEIAEKCLDD 770
             I+    LP   +  +D +++  ++   +  + P++   + S E+L    +I  +C   
Sbjct: 219 GGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYA 278
Query: 771 EGKNRPT 777
            G  R T
Sbjct: 279 NGAARLT 285

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 540 AAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGF----CDEQNEMILVYEYMANGT 595
            A+K  + + EQ     ETEI     LRH +++  I       +   ++ L+  Y  +G+
Sbjct: 34  VAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGS 92
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLH-----TGAERGIIHRDVKTTNILLDEN 650
           L   L    L P      L   + AA GL +LH     T  +  I HRD K+ N+L+  N
Sbjct: 93  LYDFLQRQTLEP---HLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSN 149
Query: 651 FVAKMSDFGLSKTGPSMEHTHVSTAVK-------GSFGYLDPEYFWRQQLTEK------S 697
               ++D GL     ++ H+  S  +        G+  Y+ PE    Q  T+       +
Sbjct: 150 LQCCIADLGL-----AVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWT 204
Query: 698 DVYSFGVVLFEVVCARAVIN 717
           D+++FG+VL+E+   R ++N
Sbjct: 205 DIWAFGLVLWEIA-RRTIVN 223

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 122/295 (41%), Gaps = 35/295 (11%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQN------EMILVYEYM 591
           LAAIK  +   ++   E + EI ML K   HR++ +  G   ++N      ++ LV E+ 
Sbjct: 51  LAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFC 109
Query: 592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF 651
             G++   +  +    L  +     C    RGL +LH   +  +IHRD+K  N+LL EN 
Sbjct: 110 GAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENA 166
Query: 652 VAKMSDFGLSKTGPSMEHT-HVSTAVKGSFGYLDPEYFWRQQLTE-----KSDVYSFGVV 705
             K+ DFG+S     ++ T        G+  ++ PE     +  +     KSD++S G+ 
Sbjct: 167 EVKLVDFGVSA---QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGIT 223
Query: 706 LFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAE 765
             E+      +    P   + L            +     P LK   S +  +KF    E
Sbjct: 224 AIEMAEGAPPLCDMHPMRALFL------------IPRNPAPRLK---SKKWSKKFQSFIE 268
Query: 766 KCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEFAEREAE 820
            CL      RP   +++ H     Q +E  +R   + +   + +  GE  E E E
Sbjct: 269 SCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDHIDRTKKKRGEKDETEYE 323

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 27/244 (11%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQN----EMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           E EI     LRH +++  I   ++ N    ++ LV +Y  +G+L  +L   +   +T + 
Sbjct: 48  EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEG 104
Query: 613 RLDACIGAARGLHYLH-----TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM 667
            +   +  A GL +LH     T  +  I HRD+K+ NIL+ +N    ++D GL+    S 
Sbjct: 105 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 164
Query: 668 EHTHVSTAVKGSFG---YLDPEYF------WRQQLTEKSDVYSFGVVLFEVV--CARAVI 716
             T +  A     G   Y+ PE           +  +++D+Y+ G+V +E+   C+   I
Sbjct: 165 TDT-IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 223
Query: 717 NP--TLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY-SPESLEKFGEIAEKCLDDEGK 773
           +    LP   +  +D +++  ++   +  + P++   + S E+L    +I  +C    G 
Sbjct: 224 HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGA 283
Query: 774 NRPT 777
            R T
Sbjct: 284 ARLT 287

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 128/280 (45%), Gaps = 40/280 (14%)
Query: 543 KRANPQSEQGLA--EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           KR    S +G++  + E E+ +L +++H ++++L    + + ++IL+ E +A G L    
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD-- 103
Query: 601 FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNI-LLDENFVA---KMS 656
           F ++   LT ++  +       G++YLH+     I H D+K  NI LLD N      K+ 
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVI 716
           DFGL+     ++  +    + G+  ++ PE    + L  ++D++S GV+ + ++   +  
Sbjct: 161 DFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 717 NPTLPKDQINLADWAMKWQKQRSLKSI--IDPHLKGNYSPESLEKFGEIAEKCLDDEGKN 774
                     L D      KQ +L ++  ++   +  Y   +     +   + L  + K 
Sbjct: 218 ----------LGD-----TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKK 262
Query: 775 RPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEF 814
           R T+ + L H          W++  D Q + SS+ +  +F
Sbjct: 263 RMTIQDSLQH---------PWIKPKDTQQALSSAWSHPQF 293

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 27/244 (11%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQN----EMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           E EI     LRH +++  I   ++ N    ++ LV +Y  +G+L  +L   +   +T + 
Sbjct: 84  EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEG 140
Query: 613 RLDACIGAARGLHYLH-----TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM 667
            +   +  A GL +LH     T  +  I HRD+K+ NIL+ +N    ++D GL+    S 
Sbjct: 141 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 200
Query: 668 EHTHVSTAVKGSFG---YLDPEYF------WRQQLTEKSDVYSFGVVLFEVV--CARAVI 716
             T +  A     G   Y+ PE           +  +++D+Y+ G+V +E+   C+   I
Sbjct: 201 TDT-IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 259
Query: 717 NP--TLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY-SPESLEKFGEIAEKCLDDEGK 773
           +    LP   +  +D +++  ++   +  + P++   + S E+L    +I  +C    G 
Sbjct: 260 HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGA 319
Query: 774 NRPT 777
            R T
Sbjct: 320 ARLT 323

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 28/197 (14%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD---------------- 579
           D     IKR    +E+     E E++ L+KL H ++V   G  D                
Sbjct: 35  DGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS 90
Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
           +   + +  E+   GTL   +       L     L+      +G+ Y+H+   + +I+RD
Sbjct: 91  KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLINRD 147
Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDV 699
           +K +NI L +    K+ DFGL     S+++       KG+  Y+ PE    Q   ++ D+
Sbjct: 148 LKPSNIFLVDTKQVKIGDFGLV---TSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDL 204
Query: 700 YSFGVVLFEV--VCARA 714
           Y+ G++L E+  VC  A
Sbjct: 205 YALGLILAELLHVCDTA 221

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 114/247 (46%), Gaps = 33/247 (13%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQN----EMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           E EI     LRH +++  I   ++ N    ++ LV +Y  +G+L  +L   +   +T + 
Sbjct: 45  EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEG 101
Query: 613 RLDACIGAARGLHYLH-----TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM 667
            +   +  A GL +LH     T  +  I HRD+K+ NIL+ +N    ++D GL+    S 
Sbjct: 102 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 161
Query: 668 EHTHVSTAVKGSFG---YLDPE---------YFWRQQLTEKSDVYSFGVVLFEVV--CAR 713
             T +  A     G   Y+ PE         +F   +  +++D+Y+ G+V +E+   C+ 
Sbjct: 162 TDT-IDIAPNHRVGTKRYMAPEVLDDSINMKHF---ESFKRADIYAMGLVFWEIARRCSI 217
Query: 714 AVINP--TLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY-SPESLEKFGEIAEKCLDD 770
             I+    LP   +  +D +++  ++   +  + P++   + S E+L    +I  +C   
Sbjct: 218 GGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYA 277
Query: 771 EGKNRPT 777
            G  R T
Sbjct: 278 NGAARLT 284

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 128/280 (45%), Gaps = 40/280 (14%)
Query: 543 KRANPQSEQGLA--EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           KR    S +G++  + E E+ +L +++H ++++L    + + ++IL+ E +A G L    
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD-- 103
Query: 601 FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNI-LLDENFVA---KMS 656
           F ++   LT ++  +       G++YLH+     I H D+K  NI LLD N      K+ 
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVI 716
           DFGL+     ++  +    + G+  ++ PE    + L  ++D++S GV+ + ++   +  
Sbjct: 161 DFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 717 NPTLPKDQINLADWAMKWQKQRSLKSI--IDPHLKGNYSPESLEKFGEIAEKCLDDEGKN 774
                     L D      KQ +L ++  ++   +  Y   +     +   + L  + K 
Sbjct: 218 ----------LGD-----TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKK 262
Query: 775 RPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEF 814
           R T+ + L H          W++  D Q + SS+ +  +F
Sbjct: 263 RMTIQDSLQH---------PWIKPKDTQQALSSAWSHPQF 293

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 128/280 (45%), Gaps = 40/280 (14%)
Query: 543 KRANPQSEQGLA--EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           KR    S +G++  + E E+ +L +++H ++++L    + + ++IL+ E +A G L    
Sbjct: 45  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD-- 102
Query: 601 FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNI-LLDENFVA---KMS 656
           F ++   LT ++  +       G++YLH+     I H D+K  NI LLD N      K+ 
Sbjct: 103 FLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 159
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVI 716
           DFGL+     ++  +    + G+  ++ PE    + L  ++D++S GV+ + ++   +  
Sbjct: 160 DFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
Query: 717 NPTLPKDQINLADWAMKWQKQRSLKSI--IDPHLKGNYSPESLEKFGEIAEKCLDDEGKN 774
                     L D      KQ +L ++  ++   +  Y   +     +   + L  + K 
Sbjct: 217 ----------LGD-----TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKK 261
Query: 775 RPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEF 814
           R T+ + L H          W++  D Q + SS+ +  +F
Sbjct: 262 RMTIQDSLQH---------PWIKPKDTQQALSSAWSHPQF 292

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 128/280 (45%), Gaps = 40/280 (14%)
Query: 543 KRANPQSEQGLA--EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           KR    S +G++  + E E+ +L +++H ++++L    + + ++IL+ E +A G L    
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD-- 103
Query: 601 FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNI-LLDENFVA---KMS 656
           F ++   LT ++  +       G++YLH+     I H D+K  NI LLD N      K+ 
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVI 716
           DFGL+     ++  +    + G+  ++ PE    + L  ++D++S GV+ + ++   +  
Sbjct: 161 DFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 717 NPTLPKDQINLADWAMKWQKQRSLKSI--IDPHLKGNYSPESLEKFGEIAEKCLDDEGKN 774
                     L D      KQ +L ++  ++   +  Y   +     +   + L  + K 
Sbjct: 218 ----------LGD-----TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKK 262
Query: 775 RPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEF 814
           R T+ + L H          W++  D Q + SS+ +  +F
Sbjct: 263 RMTIQDSLQH---------PWIKPKDTQQALSSAWSHPQF 293

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
Query: 539 LAAIKRANPQSE-QGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           + A+KR    +E +G+      EI +L +L H ++VSLI     +  + LV+E+M     
Sbjct: 47  IVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLK 106
Query: 597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMS 656
           +  +   +   L   Q         RG+ + H   +  I+HRD+K  N+L++ +   K++
Sbjct: 107 K--VLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLA 161
Query: 657 DFGLSKTG--PSMEHTHVSTAVKGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCAR 713
           DFGL++    P   +TH       +  Y  P+     ++ +   D++S G +  E++  +
Sbjct: 162 DFGLARAFGIPVRSYTHEVV----TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
Query: 714 AVINPTLPKDQI 725
            +       DQ+
Sbjct: 218 PLFPGVTDDDQL 229

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 27/244 (11%)
Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQN----EMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           E EI     LRH +++  I   ++ N    ++ LV +Y  +G+L  +L   +   +T + 
Sbjct: 51  EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEG 107
Query: 613 RLDACIGAARGLHYLH-----TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM 667
            +   +  A GL +LH     T  +  I HRD+K+ NIL+ +N    ++D GL+    S 
Sbjct: 108 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 167
Query: 668 EHTHVSTAVKGSFG---YLDPEYF------WRQQLTEKSDVYSFGVVLFEVV--CARAVI 716
             T +  A     G   Y+ PE           +  +++D+Y+ G+V +E+   C+   I
Sbjct: 168 TDT-IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 226
Query: 717 NP--TLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY-SPESLEKFGEIAEKCLDDEGK 773
           +    LP   +  +D +++  ++   +  + P++   + S E+L    +I  +C    G 
Sbjct: 227 HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGA 286
Query: 774 NRPT 777
            R T
Sbjct: 287 ARLT 290

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
Query: 539 LAAIKRANPQSE-QGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           + A+KR    +E +G+      EI +L +L H ++VSLI     +  + LV+E+M     
Sbjct: 47  IVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLK 106
Query: 597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMS 656
           +  +   +   L   Q         RG+ + H   +  I+HRD+K  N+L++ +   K++
Sbjct: 107 K--VLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLA 161
Query: 657 DFGLSKTG--PSMEHTHVSTAVKGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCAR 713
           DFGL++    P   +TH       +  Y  P+     ++ +   D++S G +  E++  +
Sbjct: 162 DFGLARAFGIPVRSYTHEVV----TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
Query: 714 AVINPTLPKDQI 725
            +       DQ+
Sbjct: 218 PLFPGVTDDDQL 229

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI+ +S LRH  LV+L    ++ NEM+++YE+M+ G L   +   +   ++  + ++   
Sbjct: 98  EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMR 156
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILL--DENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
              +GL ++H   E   +H D+K  NI+     +   K+ DFGL+      +   V+T  
Sbjct: 157 QVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT-- 211
Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
            G+  +  PE    + +   +D++S GV+ +
Sbjct: 212 -GTAEFAAPEVAEGKPVGYYTDMWSVGVLSY 241

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 12/163 (7%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWKQRLDA 616
           EI +L +L+H+++V L        ++ LV+E+  +  L+ +      DL P   K  L  
Sbjct: 51  EICLLKELKHKNIVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFL-- 107
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
                +GL + H+   R ++HRD+K  N+L++ N   K++DFGL++        + +  V
Sbjct: 108 -FQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV 163
Query: 677 KGSFGYLDPEYFWRQQLTEKS-DVYSFGVVLFEVVCARAVINP 718
             +  Y  P+  +  +L   S D++S G +  E+  A   + P
Sbjct: 164 --TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFP 204

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 539 LAAIKRANPQS-EQGLA-EFETEIEMLSKLR---HRHLVSLIGFC-----DEQNEMILVY 588
             A+KR   Q+ E+G+      E+ +L  L    H ++V L   C     D + ++ LV+
Sbjct: 39  FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVF 98
Query: 589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           E++ +  L ++L     P +  +   D      RGL +LH+     ++HRD+K  NIL+ 
Sbjct: 99  EHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVT 154
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
            +   K++DFGL++           T+V  +  Y  PE   +       D++S G +  E
Sbjct: 155 SSGQIKLADFGLARI---YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
Query: 709 VVCARAVINPTLPKDQI 725
           +   + +   +   DQ+
Sbjct: 212 MFRRKPLFRGSSDVDQL 228

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +    +L    
Sbjct: 67  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCAKLTDDH 122
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V
Sbjct: 123 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 179
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 180 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 539 LAAIKRANPQS-EQGLA-EFETEIEMLSKLR---HRHLVSLIGFC-----DEQNEMILVY 588
             A+KR   Q+ E+G+      E+ +L  L    H ++V L   C     D + ++ LV+
Sbjct: 39  FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVF 98
Query: 589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           E++ +  L ++L     P +  +   D      RGL +LH+     ++HRD+K  NIL+ 
Sbjct: 99  EHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVT 154
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
            +   K++DFGL++           T+V  +  Y  PE   +       D++S G +  E
Sbjct: 155 SSGQIKLADFGLARI---YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
Query: 709 VVCARAVINPTLPKDQI 725
           +   + +   +   DQ+
Sbjct: 212 MFRRKPLFRGSSDVDQL 228

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 27/120 (22%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS----------HLFGSDLPPL 608
           EI ML +L+H +LV+L+     +  + LV+EY  +  L            HL  S    +
Sbjct: 52  EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKS----I 107
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK--TGPS 666
           TW+          + +++ H   +   IHRDVK  NIL+ ++ V K+ DFG ++  TGPS
Sbjct: 108 TWQ--------TLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 16/175 (9%)
Query: 540 AAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSH 599
            A+K  + + +Q       E+ ++   +H ++V +        E+ ++ E++  G L   
Sbjct: 73  VAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDI 132
Query: 600 LFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG 659
           +    L     +Q    C    + L YLH    +G+IHRD+K+ +ILL  +   K+SDFG
Sbjct: 133 VSQVRL---NEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFG 186
Query: 660 ----LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
               +SK  P          + G+  ++ PE   R     + D++S G+++ E+V
Sbjct: 187 FCAQISKDVPK------RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMV 235

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 89/171 (52%), Gaps = 14/171 (8%)
Query: 543 KRANPQSEQGLA--EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           KR    S +G++  + E E+ +L +++H ++++L    + + ++IL+ E +A G L    
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD-- 103
Query: 601 FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNI-LLDENFVA---KMS 656
           F ++   LT ++  +       G++YLH+     I H D+K  NI LLD N      K+ 
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
           DFGL+     ++  +    + G+  ++ PE    + L  ++D++S GV+ +
Sbjct: 161 DFGLAH---KIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITY 208

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 17/181 (9%)
Query: 541 AIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           AIK    +  +       EI +   L+H+++V  +G   E   + +  E +  G+L S L
Sbjct: 37  AIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL-SAL 95
Query: 601 FGSDLPPLTWKQRLDACIG-----AARGLHYLHTGAERGIIHRDVKTTNILLDE-NFVAK 654
             S   PL   ++    IG        GL YLH   +  I+HRD+K  N+L++  + V K
Sbjct: 96  LRSKWGPLKDNEQ---TIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLK 149
Query: 655 MSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR--QQLTEKSDVYSFGVVLFEVVCA 712
           +SDFG SK    +     +    G+  Y+ PE   +  +   + +D++S G  + E+   
Sbjct: 150 ISDFGTSKRLAGI--NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 207
Query: 713 R 713
           +
Sbjct: 208 K 208

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 32/185 (17%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           +C +  I +   + +        E+++L +L H +++ L  F +++    LV E    G 
Sbjct: 59  ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE 118
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAAR-------GLHYLHTGAERGIIHRDVKTTNILLD 648
           L   +          ++R    + AAR       G+ Y+H      I+HRD+K  N+LL+
Sbjct: 119 LFDEIIS--------RKRFSE-VDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLE 166
Query: 649 ---ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG---YLDPEYFWRQQLTEKSDVYSF 702
              ++   ++ DFGLS       H   S  +K   G   Y+ PE        EK DV+S 
Sbjct: 167 SKSKDANIRIIDFGLS------THFEASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWST 219
Query: 703 GVVLF 707
           GV+L+
Sbjct: 220 GVILY 224

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 539 LAAIKRANPQS-EQGLA-EFETEIEMLSKLR---HRHLVSLIGFC-----DEQNEMILVY 588
             A+KR   Q+ E+G+      E+ +L  L    H ++V L   C     D + ++ LV+
Sbjct: 39  FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVF 98
Query: 589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           E++ +  L ++L     P +  +   D      RGL +LH+     ++HRD+K  NIL+ 
Sbjct: 99  EHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVT 154
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
            +   K++DFGL++           T+V  +  Y  PE   +       D++S G +  E
Sbjct: 155 SSGQIKLADFGLARI---YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
Query: 709 VVCARAVINPTLPKDQI 725
           +   + +   +   DQ+
Sbjct: 212 MFRRKPLFRGSSDVDQL 228

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 128/280 (45%), Gaps = 40/280 (14%)
Query: 543 KRANPQSEQGLA--EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           KR    S +G++  + E E+ +L +++H ++++L    + + ++IL+ E +A G L    
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFD-- 103
Query: 601 FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNI-LLDENFVA---KMS 656
           F ++   LT ++  +       G++YLH+     I H D+K  NI LLD N      K+ 
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVI 716
           DFGL+     ++  +    + G+  ++ PE    + L  ++D++S GV+ + ++   +  
Sbjct: 161 DFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 717 NPTLPKDQINLADWAMKWQKQRSLKSI--IDPHLKGNYSPESLEKFGEIAEKCLDDEGKN 774
                     L D      KQ +L ++  ++   +  Y   +     +   + L  + K 
Sbjct: 218 ----------LGD-----TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKK 262
Query: 775 RPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEF 814
           R T+ + L H          W++  D Q + SS+ +  +F
Sbjct: 263 RMTIQDSLQH---------PWIKPKDTQQALSSAWSHPQF 293

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 32/185 (17%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           +C +  I +   + +        E+++L +L H +++ L  F +++    LV E    G 
Sbjct: 76  ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE 135
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAAR-------GLHYLHTGAERGIIHRDVKTTNILLD 648
           L           +  ++R  + + AAR       G+ Y+H      I+HRD+K  N+LL+
Sbjct: 136 L--------FDEIISRKRF-SEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLE 183
Query: 649 ---ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG---YLDPEYFWRQQLTEKSDVYSF 702
              ++   ++ DFGLS       H   S  +K   G   Y+ PE        EK DV+S 
Sbjct: 184 SKSKDANIRIIDFGLST------HFEASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWST 236
Query: 703 GVVLF 707
           GV+L+
Sbjct: 237 GVILY 241

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+  FGL++        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 17/181 (9%)
Query: 541 AIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           AIK    +  +       EI +   L+H+++V  +G   E   + +  E +  G+L S L
Sbjct: 51  AIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL-SAL 109
Query: 601 FGSDLPPLTWKQRLDACIG-----AARGLHYLHTGAERGIIHRDVKTTNILLDE-NFVAK 654
             S   PL   ++    IG        GL YLH   +  I+HRD+K  N+L++  + V K
Sbjct: 110 LRSKWGPLKDNEQ---TIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLK 163
Query: 655 MSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR--QQLTEKSDVYSFGVVLFEVVCA 712
           +SDFG SK    +     +    G+  Y+ PE   +  +   + +D++S G  + E+   
Sbjct: 164 ISDFGTSKRLAGI--NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 221
Query: 713 R 713
           +
Sbjct: 222 K 222

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
           + AIK+   +S+  L E   EI ++ +    H+V   G   +  ++ +V EY   G++ S
Sbjct: 56  IVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSV-S 112
Query: 599 HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF 658
            +       LT  +         +GL YLH   +   IHRD+K  NILL+    AK++DF
Sbjct: 113 DIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADF 169
Query: 659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
           G++  G   +       V G+  ++ PE          +D++S G+   E+
Sbjct: 170 GVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEM 218

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 32/185 (17%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           +C +  I +   + +        E+++L +L H +++ L  F +++    LV E    G 
Sbjct: 77  ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE 136
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAAR-------GLHYLHTGAERGIIHRDVKTTNILLD 648
           L           +  ++R  + + AAR       G+ Y+H      I+HRD+K  N+LL+
Sbjct: 137 L--------FDEIISRKRF-SEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLE 184
Query: 649 ---ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG---YLDPEYFWRQQLTEKSDVYSF 702
              ++   ++ DFGLS       H   S  +K   G   Y+ PE        EK DV+S 
Sbjct: 185 SKSKDANIRIIDFGLST------HFEASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWST 237
Query: 703 GVVLF 707
           GV+L+
Sbjct: 238 GVILY 242

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 32/185 (17%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           +C +  I +   + +        E+++L +L H +++ L  F +++    LV E    G 
Sbjct: 53  ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE 112
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAAR-------GLHYLHTGAERGIIHRDVKTTNILLD 648
           L   +          ++R  + + AAR       G+ Y+H      I+HRD+K  N+LL+
Sbjct: 113 LFDEIIS--------RKRF-SEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLE 160
Query: 649 ---ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG---YLDPEYFWRQQLTEKSDVYSF 702
              ++   ++ DFGLS       H   S  +K   G   Y+ PE        EK DV+S 
Sbjct: 161 SKSKDANIRIIDFGLST------HFEASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWST 213
Query: 703 GVVLF 707
           GV+L+
Sbjct: 214 GVILY 218

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 28/226 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +   L H+H+V   GF ++ + + +V E     +L           LT  +      
Sbjct: 91  EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR 148
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL-SKTGPSMEHTHVSTAVK 677
               G  YLH      +IHRD+K  N+ L+E+   K+ DFGL +K     E   V   + 
Sbjct: 149 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LC 202
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK- 736
           G+  Y+ PE   ++  + + DV+S G +++ ++  +       P +   L +  ++ +K 
Sbjct: 203 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP------PFETSCLKETYLRIKKN 256
Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
           + S+   I+P                + +K L  +   RPT+ E+L
Sbjct: 257 EYSIPKHINP------------VAASLIQKMLQTDPTARPTINELL 290

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 28/226 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +   L H+H+V   GF ++ + + +V E     +L           LT  +      
Sbjct: 65  EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR 122
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL-SKTGPSMEHTHVSTAVK 677
               G  YLH      +IHRD+K  N+ L+E+   K+ DFGL +K     E   V   + 
Sbjct: 123 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LC 176
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK- 736
           G+  Y+ PE   ++  + + DV+S G +++ ++  +       P +   L +  ++ +K 
Sbjct: 177 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP------PFETSCLKETYLRIKKN 230
Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
           + S+   I+P                + +K L  +   RPT+ E+L
Sbjct: 231 EYSIPKHINP------------VAASLIQKMLQTDPTARPTINELL 264

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 28/226 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +   L H+H+V   GF ++ + + +V E     +L           LT  +      
Sbjct: 89  EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR 146
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL-SKTGPSMEHTHVSTAVK 677
               G  YLH      +IHRD+K  N+ L+E+   K+ DFGL +K     E   V   + 
Sbjct: 147 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LC 200
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK- 736
           G+  Y+ PE   ++  + + DV+S G +++ ++  +       P +   L +  ++ +K 
Sbjct: 201 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP------PFETSCLKETYLRIKKN 254
Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
           + S+   I+P                + +K L  +   RPT+ E+L
Sbjct: 255 EYSIPKHINP------------VAASLIQKMLQTDPTARPTINELL 288

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 98/226 (43%), Gaps = 28/226 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +   L H+H+V   GF ++ + + +V E     +L           LT  +      
Sbjct: 71  EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR 128
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT-HVSTAVK 677
               G  YLH      +IHRD+K  N+ L+E+   K+ DFGL+     +E+       + 
Sbjct: 129 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKTLC 182
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK- 736
           G+  Y+ PE   ++  + + DV+S G +++ ++  +       P +   L +  ++ +K 
Sbjct: 183 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP------PFETSCLKETYLRIKKN 236
Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
           + S+   I+P                + +K L  +   RPT+ E+L
Sbjct: 237 EYSIPKHINP------------VAASLIQKMLQTDPTARPTINELL 270

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 98/226 (43%), Gaps = 28/226 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +   L H+H+V   GF ++ + + +V E     +L           LT  +      
Sbjct: 67  EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR 124
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT-HVSTAVK 677
               G  YLH      +IHRD+K  N+ L+E+   K+ DFGL+     +E+       + 
Sbjct: 125 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKTLC 178
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK- 736
           G+  Y+ PE   ++  + + DV+S G +++ ++  +       P +   L +  ++ +K 
Sbjct: 179 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP------PFETSCLKETYLRIKKN 232
Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
           + S+   I+P                + +K L  +   RPT+ E+L
Sbjct: 233 EYSIPKHINP------------VAASLIQKMLQTDPTARPTINELL 266

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ D GL++        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 30/186 (16%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 155
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        H 
Sbjct: 156 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR--------HT 204
Query: 673 STAVKGSFG---YLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
              + G      Y  PE    W        D++S G ++ E++  R +   T   D IN 
Sbjct: 205 DDEMTGYVATRWYRAPEIMLNW-MHYNMTVDIWSVGCIMAELLTGRTLFPGT---DHINQ 260
Query: 728 ADWAMK 733
               M+
Sbjct: 261 LQQIMR 266

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 89/171 (52%), Gaps = 14/171 (8%)
Query: 543 KRANPQSEQGLA--EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           KR    S +G++  + E E+ +L +++H ++++L    + + ++IL+ E +A G L    
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD-- 103
Query: 601 FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNI-LLDENFVA---KMS 656
           F ++   LT ++  +       G++YLH+     I H D+K  NI LLD N      K+ 
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
           DFGL+     ++  +    + G+  ++ PE    + L  ++D++S GV+ +
Sbjct: 161 DFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 98/226 (43%), Gaps = 28/226 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +   L H+H+V   GF ++ + + +V E     +L           LT  +      
Sbjct: 67  EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR 124
Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT-HVSTAVK 677
               G  YLH      +IHRD+K  N+ L+E+   K+ DFGL+     +E+       + 
Sbjct: 125 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKTLC 178
Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK- 736
           G+  Y+ PE   ++  + + DV+S G +++ ++  +       P +   L +  ++ +K 
Sbjct: 179 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP------PFETSCLKETYLRIKKN 232
Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
           + S+   I+P                + +K L  +   RPT+ E+L
Sbjct: 233 EYSIPKHINP------------VAASLIQKMLQTDPTARPTINELL 266

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 38/183 (20%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L+H ++V L      +  ++LV+E++            DL     K+ LD C 
Sbjct: 50  EISILKELKHSNIVKLYDVIHTKKRLVLVFEHL----------DQDL-----KKLLDVCE 94
Query: 619 GAAR-------------GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG- 664
           G                G+ Y H   +R ++HRD+K  N+L++     K++DFGL++   
Sbjct: 95  GGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFG 151
Query: 665 -PSMEHTHVSTAVKGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPK 722
            P  ++TH       +  Y  P+     ++ +   D++S G +  E+V    +       
Sbjct: 152 IPVRKYTHEVV----TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA 207
Query: 723 DQI 725
           DQ+
Sbjct: 208 DQL 210

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ DF L++        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ D GL++        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 38/183 (20%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L+H ++V L      +  ++LV+E++            DL     K+ LD C 
Sbjct: 50  EISILKELKHSNIVKLYDVIHTKKRLVLVFEHL----------DQDL-----KKLLDVCE 94
Query: 619 GAAR-------------GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG- 664
           G                G+ Y H   +R ++HRD+K  N+L++     K++DFGL++   
Sbjct: 95  GGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFG 151
Query: 665 -PSMEHTHVSTAVKGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPK 722
            P  ++TH       +  Y  P+     ++ +   D++S G +  E+V    +       
Sbjct: 152 IPVRKYTHEVV----TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEA 207
Query: 723 DQI 725
           DQ+
Sbjct: 208 DQL 210

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 89/171 (52%), Gaps = 14/171 (8%)
Query: 543 KRANPQSEQGLA--EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           KR    S +G++  + E E+ +L +++H ++++L    + + ++IL+ E +A G L    
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD-- 103
Query: 601 FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNI-LLDENFVA---KMS 656
           F ++   LT ++  +       G++YLH+     I H D+K  NI LLD N      K+ 
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
           DFGL+     ++  +    + G+  ++ PE    + L  ++D++S GV+ +
Sbjct: 161 DFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 89/171 (52%), Gaps = 14/171 (8%)
Query: 543 KRANPQSEQGLA--EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           KR    S +G++  + E E+ +L +++H ++++L    + + ++IL+ E +A G L    
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD-- 103
Query: 601 FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNI-LLDENFVA---KMS 656
           F ++   LT ++  +       G++YLH+     I H D+K  NI LLD N      K+ 
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
           DFGL+     ++  +    + G+  ++ PE    + L  ++D++S GV+ +
Sbjct: 161 DFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 89/171 (52%), Gaps = 14/171 (8%)
Query: 543 KRANPQSEQGLA--EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           KR    S +G++  + E E+ +L +++H ++++L    + + ++IL+ E +A G L    
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD-- 103
Query: 601 FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNI-LLDENFVA---KMS 656
           F ++   LT ++  +       G++YLH+     I H D+K  NI LLD N      K+ 
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
           DFGL+     ++  +    + G+  ++ PE    + L  ++D++S GV+ +
Sbjct: 161 DFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS--MEHTHVSTAVKGSF 680
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +  M    V T      
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY---- 190
Query: 681 GYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
            Y  PE        E  D++S G ++ E+VC + +
Sbjct: 191 -YRAPEVILGMGYKENVDIWSVGCIMGEMVCHKIL 224

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 89/171 (52%), Gaps = 14/171 (8%)
Query: 543 KRANPQSEQGLA--EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           KR    S +G++  + E E+ +L +++H ++++L    + + ++IL+ E +A G L    
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD-- 103
Query: 601 FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNI-LLDENFVA---KMS 656
           F ++   LT ++  +       G++YLH+     I H D+K  NI LLD N      K+ 
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
           DFGL+     ++  +    + G+  ++ PE    + L  ++D++S GV+ +
Sbjct: 161 DFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 38/183 (20%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           EI +L +L+H ++V L      +  ++LV+E++            DL     K+ LD C 
Sbjct: 50  EISILKELKHSNIVKLYDVIHTKKRLVLVFEHL----------DQDL-----KKLLDVCE 94
Query: 619 GAAR-------------GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG- 664
           G                G+ Y H   +R ++HRD+K  N+L++     K++DFGL++   
Sbjct: 95  GGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFG 151
Query: 665 -PSMEHTHVSTAVKGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPK 722
            P  ++TH       +  Y  P+     ++ +   D++S G +  E+V    +       
Sbjct: 152 IPVRKYTHEIV----TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA 207
Query: 723 DQI 725
           DQ+
Sbjct: 208 DQL 210

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 27/182 (14%)
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           +   + L +LH+  +  +IHRDVK +N+L++     K  DFG+S          +    K
Sbjct: 143 VSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCK 200
Query: 678 GSFGYLDPEY----FWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMK 733
               Y  PE       ++  + KSD++S G+   E+   R       P D      W   
Sbjct: 201 ---PYXAPERINPELNQKGYSVKSDIWSLGITXIELAILR------FPYDS-----WGTP 246
Query: 734 WQKQRSLKSIIDPHLKGN-YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH 792
           +Q+ + +     P L  + +S E    F +   +CL    K RPT  E+  H  +   LH
Sbjct: 247 FQQLKQVVEEPSPQLPADKFSAE----FVDFTSQCLKKNSKERPTYPELXQHPFFT--LH 300
Query: 793 EA 794
           E+
Sbjct: 301 ES 302

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 89/171 (52%), Gaps = 14/171 (8%)
Query: 543 KRANPQSEQGLA--EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           KR    S +G++  + E E+ +L +++H ++++L    + + ++IL+ E +A G L    
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD-- 103
Query: 601 FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNI-LLDENFVA---KMS 656
           F ++   LT ++  +       G++YLH+     I H D+K  NI LLD N      K+ 
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
           DFGL+     ++  +    + G+  ++ PE    + L  ++D++S GV+ +
Sbjct: 161 DFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 89/171 (52%), Gaps = 14/171 (8%)
Query: 543 KRANPQSEQGLA--EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL 600
           KR    S +G++  + E E+ +L +++H ++++L    + + ++IL+ E +A G L    
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD-- 103
Query: 601 FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNI-LLDENFVA---KMS 656
           F ++   LT ++  +       G++YLH+     I H D+K  NI LLD N      K+ 
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160
Query: 657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
           DFGL+     ++  +    + G+  ++ PE    + L  ++D++S GV+ +
Sbjct: 161 DFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + + T    +  Y
Sbjct: 143 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYY 196
Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
             PE        E  D++S G ++ E+VC + +
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKIL 229

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 43/207 (20%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGF-------------CDEQN 582
           D    AIK+    +E+ L+   +E+ +L+ L H+++V                    +++
Sbjct: 30  DSRYYAIKKIR-HTEEKLSTILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKS 88
Query: 583 EMILVYEYMANGTLRSHLFGSDLPPLT------WKQRLDACIGAARGLHYLHTGAERGII 636
            + +  EY  N TL   +   +L          ++Q L+A       L Y+H+   +GII
Sbjct: 89  TLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEA-------LSYIHS---QGII 138
Query: 637 HRDVKTTNILLDENFVAKMSDFGLSK-TGPSMEHTHVS-----------TAVKGSFGYLD 684
           HR++K  NI +DE+   K+ DFGL+K    S++   +            T+  G+  Y+ 
Sbjct: 139 HRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVA 198
Query: 685 PEYF-WRQQLTEKSDVYSFGVVLFEVV 710
            E         EK D YS G++ FE +
Sbjct: 199 TEVLDGTGHYNEKIDXYSLGIIFFEXI 225

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 26/159 (16%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+E+L KL H +++ L    ++ +   +V E    G L   +          K++  +  
Sbjct: 71  EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII---------KRKRFSEH 121
Query: 619 GAAR-------GLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSME 668
            AAR       G+ Y+H   +  I+HRD+K  NILL   +++   K+ DFGLS      +
Sbjct: 122 DAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQ 176
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
           +T +   + G+  Y+ PE   R    EK DV+S GV+L+
Sbjct: 177 NTKMKDRI-GTAYYIAPEVL-RGTYDEKCDVWSAGVILY 213

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  ++H +++ L+        +    E   +  L +HL G+DL  +   Q+L    
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+     IIHRD+K +N+ ++E+   K+ D GL++        +V
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYV 183
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +T       Y  PE    W     +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 184 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 26/159 (16%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+E+L KL H +++ L    ++ +   +V E    G L   +          K++  +  
Sbjct: 71  EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII---------KRKRFSEH 121
Query: 619 GAAR-------GLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSME 668
            AAR       G+ Y+H   +  I+HRD+K  NILL   +++   K+ DFGLS      +
Sbjct: 122 DAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQ 176
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
           +T +   + G+  Y+ PE   R    EK DV+S GV+L+
Sbjct: 177 NTKMKDRI-GTAYYIAPEVL-RGTYDEKCDVWSAGVILY 213

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 26/159 (16%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E+E+L KL H +++ L    ++ +   +V E    G L   +          K++  +  
Sbjct: 71  EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII---------KRKRFSEH 121
Query: 619 GAAR-------GLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSME 668
            AAR       G+ Y+H   +  I+HRD+K  NILL   +++   K+ DFGLS      +
Sbjct: 122 DAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQ 176
Query: 669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
           +T +   + G+  Y+ PE   R    EK DV+S GV+L+
Sbjct: 177 NTKMKDRI-GTAYYIAPEVL-RGTYDEKCDVWSAGVILY 213

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + + T    +  Y
Sbjct: 132 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYY 185
Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
             PE        E  D++S G ++ E+VC + +
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKIL 218

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 21/165 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  L+H +++ L+        +    E  +   L + L G+DL  +   Q L    
Sbjct: 77  ELRLLKHLKHENVIGLLDVFTPATSI----EDFSEVYLVTTLMGADLNNIVKSQALSDEH 132
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+    GIIHRD+K +N+ ++E+   ++ DFGL++        +V
Sbjct: 133 VQFLVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV 189
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAV 715
           +T       Y  PE    W     +  D++S G ++ E++  +A+
Sbjct: 190 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLQGKAL 228

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 582 NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVK 641
           + +  V EY+  G L  H+    +        +      A GL +L +   +GII+RD+K
Sbjct: 94  DRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLK 148
Query: 642 TTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYS 701
             N++LD     K++DFG+ K   ++     +    G+  Y+ PE    Q   +  D ++
Sbjct: 149 LDNVMLDSEGHIKIADFGMCKE--NIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWA 206
Query: 702 FGVVLFEVVCARA 714
           FGV+L+E++  +A
Sbjct: 207 FGVLLYEMLAGQA 219

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
           +V L     +   + +V EYM  G L + +   D+P   W +   A +  A  L  +H+ 
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFYTAEVVLA--LDAIHS- 191
Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
              G IHRDVK  N+LLD++   K++DFG              TAV G+  Y+ PE    
Sbjct: 192 --MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKS 248
Query: 691 Q----QLTEKSDVYSFGVVLFEVVCA 712
           Q        + D +S GV L+E++  
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVG 274

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
           +V L     +   + +V EYM  G L + +   D+P   W +   A +  A  L  +H+ 
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFYTAEVVLA--LDAIHS- 186
Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
              G IHRDVK  N+LLD++   K++DFG              TAV G+  Y+ PE    
Sbjct: 187 --MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKS 243
Query: 691 Q----QLTEKSDVYSFGVVLFEVVCA 712
           Q        + D +S GV L+E++  
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVG 269

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 17/174 (9%)
Query: 559 EIEMLSKLRHRHLVSLIGF------CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           E+ +L  + H++++SL+         +E  ++ LV E M     +      D   +++  
Sbjct: 71  ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLL 130
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
               C     G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +     +
Sbjct: 131 YQMLC-----GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAST---NFM 179
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN 726
            T    +  Y  PE        E  D++S G ++ E+V    +   T   DQ N
Sbjct: 180 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWN 233

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS--MEHTHVSTAVKGSF 680
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +  M    V T      
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY---- 190
Query: 681 GYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
            Y  PE        E  D++S G ++ E+VC + +
Sbjct: 191 -YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKIL 224

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
           +V L     +   + +V EYM  G L + +   D+P   W +   A +  A  L  +H+ 
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFYTAEVVLA--LDAIHS- 191
Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
              G IHRDVK  N+LLD++   K++DFG              TAV G+  Y+ PE    
Sbjct: 192 --MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKS 248
Query: 691 Q----QLTEKSDVYSFGVVLFEVVCA 712
           Q        + D +S GV L+E++  
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVG 274

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 582 NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVK 641
           + +  V EY+  G L  H+    +        +      A GL +L +   +GII+RD+K
Sbjct: 415 DRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLK 469
Query: 642 TTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYS 701
             N++LD     K++DFG+ K   ++     +    G+  Y+ PE    Q   +  D ++
Sbjct: 470 LDNVMLDSEGHIKIADFGMCKE--NIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWA 527
Query: 702 FGVVLFEVVCARA 714
           FGV+L+E++  +A
Sbjct: 528 FGVLLYEMLAGQA 540

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 12/163 (7%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWKQRLDA 616
           EI +L +L+H+++V L        ++ LV+E+  +  L+ +      DL P   K  L  
Sbjct: 51  EICLLKELKHKNIVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFL-- 107
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
                +GL + H+   R ++HRD+K  N+L++ N   K+++FGL++        + +  V
Sbjct: 108 -FQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV 163
Query: 677 KGSFGYLDPEYFWRQQLTEKS-DVYSFGVVLFEVVCARAVINP 718
             +  Y  P+  +  +L   S D++S G +  E+  A   + P
Sbjct: 164 --TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 21/165 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  L+H +++ L+        +    E  +   L + L G+DL  +   Q L    
Sbjct: 69  ELRLLKHLKHENVIGLLDVFTPATSI----EDFSEVYLVTTLMGADLNNIVKCQALSDEH 124
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+    GIIHRD+K +N+ ++E+   ++ DFGL++        +V
Sbjct: 125 VQFLVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYV 181
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAV 715
           +T       Y  PE    W     +  D++S G ++ E++  +A+
Sbjct: 182 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLQGKAL 220

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 23/194 (11%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
           L A+K    + E+  A  + EI     LRH ++V           + +V EY + G L  
Sbjct: 46  LVAVKYIE-RGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 599 HL-----FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA 653
            +     F  D     ++Q +        G+ Y H      + HRD+K  N LLD +   
Sbjct: 105 RICNAGRFSEDEARFFFQQLIS-------GVSYCHA---MQVCHRDLKLENTLLDGSPAP 154
Query: 654 --KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEK-SDVYSFGVVLF-EV 709
             K+ DFG SK+  S+ H+   + V G+  Y+ PE   +++   K +DV+S GV L+  +
Sbjct: 155 RLKICDFGYSKS--SVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 710 VCARAVINPTLPKD 723
           V A    +P  PK+
Sbjct: 212 VGAYPFEDPEEPKN 225

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 109/256 (42%), Gaps = 52/256 (20%)
Query: 582 NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR----GLHYLHTGAERGIIH 637
           +E+IL+ EY A G     +F   LP L      +  I   +    G++YLH   +  I+H
Sbjct: 102 SEIILILEYAAGG----EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVH 154
Query: 638 RDVKTTNILLDENFV---AKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
            D+K  NILL   +     K+ DFG+S+    + H      + G+  YL PE      +T
Sbjct: 155 LDLKPQNILLSSIYPLGDIKIVDFGMSR---KIGHACELREIMGTPEYLAPEILNYDPIT 211
Query: 695 EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSP 754
             +D+++ G++ + ++   +   P + +D             Q +  +I    +  +YS 
Sbjct: 212 TATDMWNIGIIAYMLLTHTS---PFVGED------------NQETYLNI--SQVNVDYSE 254
Query: 755 ESLEKFGEIA----EKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQNSF----- 805
           E+     ++A    +  L    + RPT    L H         +W++  D +N F     
Sbjct: 255 ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH---------SWLQQWDFENLFHPEET 305
Query: 806 SSSQALGEFAEREAED 821
           SSS    + + R +ED
Sbjct: 306 SSSSQTQDHSVRSSED 321

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 614 LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL-SKTGPSMEHTHV 672
           L   I  A  + +LH+   +G++HRD+K +NI    + V K+ DFGL +      E   V
Sbjct: 167 LHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 673 STAVK---------GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
            T +          G+  Y+ PE       + K D++S G++LFE++
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 42/236 (17%)
Query: 562 MLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL-FGSDLPPLTWKQRLDACIGA 620
           M+SKL H+HLV   G C   +E ILV E++  G+L ++L    +   + WK  +   + A
Sbjct: 65  MMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAA 124
Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILL---------DENFVAKMSDFGLSKTGPSMEHTH 671
           A  +H+L    E  +IH +V   NILL         +  F+ K+SD G+S T        
Sbjct: 125 A--MHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISIT------VL 172
Query: 672 VSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADW 730
               ++    ++ PE     + L   +D +SFG  L+E+                   D 
Sbjct: 173 PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG---------------GDK 217
Query: 731 AMK-WQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL 785
            +     QR L+   D H     +P++ E    +   C+D E  +RP+   ++  L
Sbjct: 218 PLSALDSQRKLQFYEDRHQLP--APKAAE-LANLINNCMDYEPDHRPSFRAIIRDL 270

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
           +   + L+YL    + G+IHRDVK +NILLDE    K+ DFG+S     +          
Sbjct: 131 VAIVKALYYLK--EKHGVIHRDVKPSNILLDERGQIKLCDFGISG---RLVDDKAKDRSA 185
Query: 678 GSFGYLDPEYFWRQQLTE-----KSDVYSFGVVLFEV 709
           G   Y+ PE       T+     ++DV+S G+ L E+
Sbjct: 186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVEL 222

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 22/167 (13%)
Query: 566 LRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWKQRLDACIGA 620
           LRH ++V           + +V EY + G L   +     F  D     ++Q +      
Sbjct: 72  LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS----- 126
Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVA--KMSDFGLSKTGPSMEHTHVSTAVKG 678
             G+ Y H      + HRD+K  N LLD +     K++DFG SK   S+ H+   +AV G
Sbjct: 127 --GVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA--SVLHSQPKSAV-G 178
Query: 679 SFGYLDPEYFWRQQLTEK-SDVYSFGVVLF-EVVCARAVINPTLPKD 723
           +  Y+ PE   +++   K +DV+S GV L+  +V A    +P  PK+
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 21/165 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD--- 615
           E+ +L  L+H +++ L+        +    E  +   L + L G+DL  +   Q L    
Sbjct: 77  ELRLLKHLKHENVIGLLDVFTPATSI----EDFSEVYLVTTLMGADLNNIVKCQALSDEH 132
Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                    RGL Y+H+    GIIHRD+K +N+ ++E+   ++ DFGL++        +V
Sbjct: 133 VQFLVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV 189
Query: 673 STAVKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCARAV 715
           +T       Y  PE    W     +  D++S G ++ E++  +A+
Sbjct: 190 ATR-----WYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLQGKAL 228

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
           +++V E +  G L S +        T ++  +        + YLH+     I HRDVK  
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 190
Query: 644 NILLDE---NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           N+L      N + K++DFG +K   S  H  ++T     + Y+ PE    ++  +  D++
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTS--HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 247
Query: 701 SFGVVLFEVVCA 712
           S GV+++ ++C 
Sbjct: 248 SLGVIMYILLCG 259

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 32/185 (17%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT 595
           +C +  I +   + +        E+++L +L H ++  L  F +++    LV E    G 
Sbjct: 53  ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGE 112
Query: 596 LRSHLFGSDLPPLTWKQRLDACIGAAR-------GLHYLHTGAERGIIHRDVKTTNILLD 648
           L           +  ++R  + + AAR       G+ Y H      I+HRD+K  N+LL+
Sbjct: 113 L--------FDEIISRKRF-SEVDAARIIRQVLSGITYXHKNK---IVHRDLKPENLLLE 160
Query: 649 ---ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG---YLDPEYFWRQQLTEKSDVYSF 702
              ++   ++ DFGLS       H   S   K   G   Y+ PE        EK DV+S 
Sbjct: 161 SKSKDANIRIIDFGLST------HFEASKKXKDKIGTAYYIAPEVL-HGTYDEKCDVWST 213
Query: 703 GVVLF 707
           GV+L+
Sbjct: 214 GVILY 218

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 26/198 (13%)
Query: 536 DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM-------ILVY 588
           DC  A  +   P  E    +   E++ L+KL H  +V       E+N           VY
Sbjct: 30  DCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVY 89
Query: 589 EYMANGTLRSHLFGSDLP-PLTWKQR-----LDACIGAARGLHYLHTGAERGIIHRDVKT 642
            Y+     R       +    T ++R     L   +  A  + +LH+   +G++HRD+K 
Sbjct: 90  LYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKP 146
Query: 643 TNILLDENFVAKMSDFGLSKTGPSMEHTHV----------STAVKGSFGYLDPEYFWRQQ 692
           +NI    + V K+ DFGL       E               T   G+  Y+ PE      
Sbjct: 147 SNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNS 206
Query: 693 LTEKSDVYSFGVVLFEVV 710
            + K D++S G++LFE++
Sbjct: 207 YSHKVDIFSLGLILFELL 224

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 536 DCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSLIGF------CDEQNEMILVY 588
           D  +A  K + P Q++        E+ ++  + H++++SL+         +E  ++ LV 
Sbjct: 49  DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           E M     +      D   +++      C     G+ +LH+    GIIHRD+K +NI++ 
Sbjct: 109 ELMDANLXQVIQMELDHERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVK 160
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
            +   K+ DFGL++T  +   + + T    +  Y  PE        E  D++S G ++ E
Sbjct: 161 SDXTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 709 VV 710
           +V
Sbjct: 218 MV 219

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 559 EIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           EIE+L +  +H ++++L    D+   + LV E M  G L   +             +   
Sbjct: 70  EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT 129
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNIL-LDENF---VAKMSDFGLSKTGPSMEHTHVS 673
           IG  + + YLH+   +G++HRD+K +NIL +DE+      ++ DFG +K   +     ++
Sbjct: 130 IG--KTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT 184
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
                +F  + PE   RQ   E  D++S G++L+ ++
Sbjct: 185 PCYTANF--VAPEVLKRQGYDEGCDIWSLGILLYTML 219

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
           +++V E +  G L S +        T ++  +        + YLH+     I HRDVK  
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 196
Query: 644 NILLDE---NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           N+L      N + K++DFG +K   S  H  ++T     + Y+ PE    ++  +  D++
Sbjct: 197 NLLYTSKRPNAILKLTDFGFAKETTS--HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 253
Query: 701 SFGVVLFEVVCA 712
           S GV+++ ++C 
Sbjct: 254 SLGVIMYILLCG 265

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 559 EIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           EIE+L +  +H ++++L    D+   + LV E M  G L   +        + ++     
Sbjct: 70  EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVL 127
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNIL-LDENF---VAKMSDFGLSKTGPSMEHTHVS 673
               + + YLH+   +G++HRD+K +NIL +DE+      ++ DFG +K   +     ++
Sbjct: 128 HTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT 184
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
                +F  + PE   RQ   E  D++S G++L+ ++
Sbjct: 185 PCYTANF--VAPEVLKRQGYDEGCDIWSLGILLYTML 219

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 536 DCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSLIGF------CDEQNEMILVY 588
           D  +A  K + P Q++        E+ ++  + H++++SL+         +E  ++ LV 
Sbjct: 49  DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           E M     +      D   +++      C     G+ +LH+    GIIHRD+K +NI++ 
Sbjct: 109 ELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVK 160
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
            +   K+ DFGL++T  +   + + T    +  Y  PE        E  D++S G ++ E
Sbjct: 161 SDXTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 709 VV 710
           +V
Sbjct: 218 MV 219

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
           +++V E +  G L S +        T ++  +        + YLH+     I HRDVK  
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 160
Query: 644 NILLDE---NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           N+L      N + K++DFG +K   S  H  ++T     + Y+ PE    ++  +  D++
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAKETTS--HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 217
Query: 701 SFGVVLFEVVCA 712
           S GV+++ ++C 
Sbjct: 218 SLGVIMYILLCG 229

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
           +++V E +  G L S +        T ++  +        + YLH+     I HRDVK  
Sbjct: 90  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 146
Query: 644 NILLDE---NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           N+L      N + K++DFG +K   S  H  ++T     + Y+ PE    ++  +  D++
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTS--HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 203
Query: 701 SFGVVLFEVVCA 712
           S GV+++ ++C 
Sbjct: 204 SLGVIMYILLCG 215

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
           +++V E +  G L S +        T ++  +        + YLH+     I HRDVK  
Sbjct: 90  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 146
Query: 644 NILLDE---NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           N+L      N + K++DFG +K   S  H  ++T     + Y+ PE    ++  +  D++
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTS--HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 203
Query: 701 SFGVVLFEVVCA 712
           S GV+++ ++C 
Sbjct: 204 SLGVIMYILLCG 215

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
           +++V E +  G L S +        T ++  +        + YLH+     I HRDVK  
Sbjct: 89  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 145
Query: 644 NILLDE---NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           N+L      N + K++DFG +K   S  H  ++T     + Y+ PE    ++  +  D++
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAKETTS--HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 202
Query: 701 SFGVVLFEVVCA 712
           S GV+++ ++C 
Sbjct: 203 SLGVIMYILLCG 214

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
           +++V E +  G L S +        T ++  +        + YLH+     I HRDVK  
Sbjct: 96  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 152
Query: 644 NILLDE---NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           N+L      N + K++DFG +K   S  H  ++T     + Y+ PE    ++  +  D++
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAKETTS--HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 209
Query: 701 SFGVVLFEVVCA 712
           S GV+++ ++C 
Sbjct: 210 SLGVIMYILLCG 221

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
           +++V E +  G L S +        T ++  +        + YLH+     I HRDVK  
Sbjct: 88  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 144
Query: 644 NILLDE---NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           N+L      N + K++DFG +K   S  H  ++T     + Y+ PE    ++  +  D++
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTS--HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 201
Query: 701 SFGVVLFEVVCA 712
           S GV+++ ++C 
Sbjct: 202 SLGVIMYILLCG 213

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
           +++V E +  G L S +        T ++  +        + YLH+     I HRDVK  
Sbjct: 94  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 150
Query: 644 NILLDE---NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           N+L      N + K++DFG +K   S  H  ++T     + Y+ PE    ++  +  D++
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAKETTS--HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 207
Query: 701 SFGVVLFEVVCA 712
           S GV+++ ++C 
Sbjct: 208 SLGVIMYILLCG 219

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
           +++V E +  G L S +        T ++  +        + YLH+     I HRDVK  
Sbjct: 95  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 151
Query: 644 NILLDE---NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           N+L      N + K++DFG +K   S  H  ++T     + Y+ PE    ++  +  D++
Sbjct: 152 NLLYTSKRPNAILKLTDFGFAKETTS--HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 208
Query: 701 SFGVVLFEVVCA 712
           S GV+++ ++C 
Sbjct: 209 SLGVIMYILLCG 220

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 40/232 (17%)
Query: 562 MLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL-FGSDLPPLTWKQRLDACIGA 620
           M+SKL H+HLV   G C   +E ILV E++  G+L ++L    +   + WK  L+     
Sbjct: 65  MMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--LEVAKQL 122
Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILL---------DENFVAKMSDFGLSKTGPSMEHTH 671
           A  +H+L    E  +IH +V   NILL         +  F+ K+SD G+S T        
Sbjct: 123 AWAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISIT------VL 172
Query: 672 VSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADW 730
               ++    ++ PE     + L   +D +SFG  L+E+        P    D       
Sbjct: 173 PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGD--KPLSALDS------ 224
Query: 731 AMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
                 QR L+   D H     +P++ E    +   C+D E  +RP+   ++
Sbjct: 225 ------QRKLQFYEDRHQLP--APKAAE-LANLINNCMDYEPDHRPSFRAII 267

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           + E E  +   L+H ++V L     E+    L+++ +  G L       D+    +    
Sbjct: 67  KLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL-----FEDIVAREYYSEA 121
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF---VAKMSDFGLSKTGPSMEHTH 671
           DA     + L  +    + G++HRD+K  N+LL         K++DFGL+      +   
Sbjct: 122 DASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW 181
Query: 672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
              A  G+ GYL PE   +    +  D+++ GV+L+
Sbjct: 182 FGFA--GTPGYLSPEVLRKDPYGKPVDLWACGVILY 215

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 559 EIEMLSKLRHRHLVSLIGF------CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           E+ ++  + H++++SL+         +E  ++ LV E M     +      D   +++  
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL 170
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
               C     G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + +
Sbjct: 171 YQMLC-----GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFM 219
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
            T    +  Y  PE        E  D++S G ++ E+V
Sbjct: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 113/274 (41%), Gaps = 46/274 (16%)
Query: 539 LAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           + AIK  N +    Q L  +  EI  L+KL+ +H   +I   D +     +Y  M  G +
Sbjct: 54  IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-QHSDKIIRLYDYEITDQYIYMVMECGNI 112
Query: 597 RSHLF---GSDLPPLT----WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE 649
             + +      + P      WK  L+A          +HT  + GI+H D+K  N L+ +
Sbjct: 113 DLNSWLKKKKSIDPWERKSYWKNMLEA----------VHTIHQHGIVHSDLKPANFLIVD 162
Query: 650 NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKS-----------D 698
             + K+ DFG++        + V  +  G+  Y+ PE       + ++           D
Sbjct: 163 GML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 221
Query: 699 VYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLE 758
           V+S G +L+ +   +      +  +QI+             L +IIDP+ +  +     +
Sbjct: 222 VWSLGCILYYMTYGKTPFQQII--NQIS------------KLHAIIDPNHEIEFPDIPEK 267
Query: 759 KFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH 792
              ++ + CL  + K R ++ E+L H    +Q H
Sbjct: 268 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 301

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           + E E  +   L+H ++V L     E+    LV++ +  G L       D+    +    
Sbjct: 49  KLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL-----FEDIVAREYYSEA 103
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGLSKTGPSMEHTH 671
           DA     + L  +    + G++HRD+K  N+LL    +    K++DFGL+      +   
Sbjct: 104 DASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAW 163
Query: 672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
              A  G+ GYL PE   ++   +  D+++ GV+L+
Sbjct: 164 FGFA--GTPGYLSPEVLRKEAYGKPVDIWACGVILY 197

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 113/274 (41%), Gaps = 46/274 (16%)
Query: 539 LAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           + AIK  N +    Q L  +  EI  L+KL+ +H   +I   D +     +Y  M  G +
Sbjct: 38  IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-QHSDKIIRLYDYEITDQYIYMVMECGNI 96
Query: 597 RSHLF---GSDLPPLT----WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE 649
             + +      + P      WK  L+A          +HT  + GI+H D+K  N L+ +
Sbjct: 97  DLNSWLKKKKSIDPWERKSYWKNMLEA----------VHTIHQHGIVHSDLKPANFLIVD 146
Query: 650 NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKS-----------D 698
             + K+ DFG++        + V  +  G+  Y+ PE       + ++           D
Sbjct: 147 GML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 205
Query: 699 VYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLE 758
           V+S G +L+ +   +      +  +QI+             L +IIDP+ +  +     +
Sbjct: 206 VWSLGCILYYMTYGKTPFQQII--NQIS------------KLHAIIDPNHEIEFPDIPEK 251
Query: 759 KFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH 792
              ++ + CL  + K R ++ E+L H    +Q H
Sbjct: 252 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 285

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 536 DCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSLIGF------CDEQNEMILVY 588
           D  +A  K + P Q++        E+ ++  + H++++SL+         +E  ++ LV 
Sbjct: 50  DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 109
Query: 589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           E M     +      D   +++      C     G+ +LH+    GIIHRD+K +NI++ 
Sbjct: 110 ELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVK 161
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
            +   K+ DFGL++T  +   + + T    +  Y  PE        E  D++S G ++ E
Sbjct: 162 SDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 218
Query: 709 VV 710
           +V
Sbjct: 219 MV 220

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 559 EIEMLSKLRHRHLVSLIGF------CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           E+ ++  + H++++SL+         +E  ++ LV E M     +      D   +++  
Sbjct: 74  ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL 133
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
               C     G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + +
Sbjct: 134 YQMLC-----GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFM 182
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
            T    +  Y  PE        E  D++S G ++ E+V
Sbjct: 183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 536 DCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSLIGF------CDEQNEMILVY 588
           D  +A  K + P Q++        E+ ++  + H++++SL+         +E  ++ LV 
Sbjct: 48  DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 107
Query: 589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           E M     +      D   +++      C     G+ +LH+    GIIHRD+K +NI++ 
Sbjct: 108 ELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVK 159
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
            +   K+ DFGL++T  +   + + T    +  Y  PE        E  D++S G ++ E
Sbjct: 160 SDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 216
Query: 709 VV 710
           +V
Sbjct: 217 MV 218

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 536 DCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSLIGF------CDEQNEMILVY 588
           D  +A  K + P Q++        E+ ++  + H++++SL+         +E  ++ LV 
Sbjct: 49  DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           E M     +      D   +++      C     G+ +LH+    GIIHRD+K +NI++ 
Sbjct: 109 ELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVK 160
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
            +   K+ DFGL++T  +   + + T    +  Y  PE        E  D++S G ++ E
Sbjct: 161 SDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 709 VV 710
           +V
Sbjct: 218 MV 219

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 48/275 (17%)
Query: 539 LAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           + AIK  N +    Q L  +  EI  L+KL+ +H   +I   D +     +Y  M  G +
Sbjct: 35  IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-QHSDKIIRLYDYEITDQYIYMVMECGNI 93
Query: 597 RSHLF---GSDLPPLT----WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE 649
             + +      + P      WK  L+A          +HT  + GI+H D+K  N L+ +
Sbjct: 94  DLNSWLKKKKSIDPWERKSYWKNMLEA----------VHTIHQHGIVHSDLKPANFLIVD 143
Query: 650 NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKS-----------D 698
             + K+ DFG++        + V  +  G+  Y+ PE       + ++           D
Sbjct: 144 GML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 202
Query: 699 VYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLE 758
           V+S G +L+ +   +      +  +QI+             L +IIDP+ +  + P+  E
Sbjct: 203 VWSLGCILYYMTYGKTPFQQII--NQIS------------KLHAIIDPNHEIEF-PDIPE 247
Query: 759 K-FGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH 792
           K   ++ + CL  + K R ++ E+L H    +Q H
Sbjct: 248 KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 282

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 536 DCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSLIGF------CDEQNEMILVY 588
           D  +A  K + P Q++        E+ ++  + H++++SL+         +E  ++ LV 
Sbjct: 49  DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           E M     +      D   +++      C     G+ +LH+    GIIHRD+K +NI++ 
Sbjct: 109 ELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVK 160
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
            +   K+ DFGL++T  +   + + T    +  Y  PE        E  D++S G ++ E
Sbjct: 161 SDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 709 VV 710
           +V
Sbjct: 218 MV 219

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 113/274 (41%), Gaps = 46/274 (16%)
Query: 539 LAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           + AIK  N +    Q L  +  EI  L+KL+ +H   +I   D +     +Y  M  G +
Sbjct: 82  IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-QHSDKIIRLYDYEITDQYIYMVMECGNI 140
Query: 597 RSHLF---GSDLPPLT----WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE 649
             + +      + P      WK  L+A          +HT  + GI+H D+K  N L+ +
Sbjct: 141 DLNSWLKKKKSIDPWERKSYWKNMLEA----------VHTIHQHGIVHSDLKPANFLIVD 190
Query: 650 NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKS-----------D 698
             + K+ DFG++        + V  +  G+  Y+ PE       + ++           D
Sbjct: 191 GML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 249
Query: 699 VYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLE 758
           V+S G +L+ +   +      +  +QI+             L +IIDP+ +  +     +
Sbjct: 250 VWSLGCILYYMTYGKTPFQQII--NQIS------------KLHAIIDPNHEIEFPDIPEK 295
Query: 759 KFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH 792
              ++ + CL  + K R ++ E+L H    +Q H
Sbjct: 296 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 329

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 559 EIEMLSKLRHRHLVSLIGF------CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           E+ ++  + H++++SL+         +E  ++ LV E M     +      D   +++  
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL 170
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
               C     G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + +
Sbjct: 171 YQMLC-----GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFM 219
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
            T    +  Y  PE        E  D++S G ++ E+V
Sbjct: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 536 DCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSLIGF------CDEQNEMILVY 588
           D  +A  K + P Q++        E+ ++  + H++++SL+         +E  ++ LV 
Sbjct: 42  DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 101
Query: 589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           E M     +      D   +++      C     G+ +LH+    GIIHRD+K +NI++ 
Sbjct: 102 ELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVK 153
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
            +   K+ DFGL++T  +   + + T    +  Y  PE        E  D++S G ++ E
Sbjct: 154 SDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 210
Query: 709 VV 710
           +V
Sbjct: 211 MV 212

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 536 DCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSLIGF------CDEQNEMILVY 588
           D  +A  K + P Q++        E+ ++  + H++++SL+         +E  ++ LV 
Sbjct: 43  DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 102
Query: 589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           E M     +      D   +++      C     G+ +LH+    GIIHRD+K +NI++ 
Sbjct: 103 ELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVK 154
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
            +   K+ DFGL++T  +   + + T    +  Y  PE        E  D++S G ++ E
Sbjct: 155 SDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 211
Query: 709 VV 710
           +V
Sbjct: 212 MV 213

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 113/274 (41%), Gaps = 46/274 (16%)
Query: 539 LAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           + AIK  N +    Q L  +  EI  L+KL+ +H   +I   D +     +Y  M  G +
Sbjct: 34  IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-QHSDKIIRLYDYEITDQYIYMVMECGNI 92
Query: 597 RSHLF---GSDLPPLT----WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE 649
             + +      + P      WK  L+A          +HT  + GI+H D+K  N L+ +
Sbjct: 93  DLNSWLKKKKSIDPWERKSYWKNMLEA----------VHTIHQHGIVHSDLKPANFLIVD 142
Query: 650 NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKS-----------D 698
             + K+ DFG++        + V  +  G+  Y+ PE       + ++           D
Sbjct: 143 GML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 201
Query: 699 VYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLE 758
           V+S G +L+ +   +      +  +QI+             L +IIDP+ +  +     +
Sbjct: 202 VWSLGCILYYMTYGKTPFQQII--NQIS------------KLHAIIDPNHEIEFPDIPEK 247
Query: 759 KFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH 792
              ++ + CL  + K R ++ E+L H    +Q H
Sbjct: 248 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 281

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 536 DCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSLIGF------CDEQNEMILVY 588
           D  +A  K + P Q++        E+ ++  + H++++SL+         +E  ++ LV 
Sbjct: 43  DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 102
Query: 589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           E M     +      D   +++      C     G+ +LH+    GIIHRD+K +NI++ 
Sbjct: 103 ELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVK 154
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
            +   K+ DFGL++T  +   + + T    +  Y  PE        E  D++S G ++ E
Sbjct: 155 SDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 211
Query: 709 VV 710
           +V
Sbjct: 212 MV 213

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + + T    +  Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT---SFMMTPYVVTRYY 191
Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             PE        E  D++S GV++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMI 219

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 46/274 (16%)
Query: 539 LAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           + AIK  N +    Q L  +  EI  L+KL+ +H   +I   D +     +Y  M  G +
Sbjct: 54  IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-QHSDKIIRLYDYEITDQYIYMVMECGNI 112
Query: 597 RSHLF---GSDLPPLT----WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE 649
             + +      + P      WK  L+A          +HT  + GI+H D+K  N L+ +
Sbjct: 113 DLNSWLKKKKSIDPWERKSYWKNMLEA----------VHTIHQHGIVHSDLKPANFLIVD 162
Query: 650 NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKS-----------D 698
             + K+ DFG++          V  +  G+  Y+ PE       + ++           D
Sbjct: 163 GML-KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 221
Query: 699 VYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLE 758
           V+S G +L+ +   +      +  +QI+             L +IIDP+ +  +     +
Sbjct: 222 VWSLGCILYYMTYGKTPFQQII--NQIS------------KLHAIIDPNHEIEFPDIPEK 267
Query: 759 KFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH 792
              ++ + CL  + K R ++ E+L H    +Q H
Sbjct: 268 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 301

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 48/275 (17%)
Query: 539 LAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           + AIK  N +    Q L  +  EI  L+KL+ +H   +I   D +     +Y  M  G +
Sbjct: 82  IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-QHSDKIIRLYDYEITDQYIYMVMECGNI 140
Query: 597 RSHLF---GSDLPPLT----WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE 649
             + +      + P      WK  L+A          +HT  + GI+H D+K  N L+ +
Sbjct: 141 DLNSWLKKKKSIDPWERKSYWKNMLEA----------VHTIHQHGIVHSDLKPANFLIVD 190
Query: 650 NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKS-----------D 698
             + K+ DFG++        + V  +  G+  Y+ PE       + ++           D
Sbjct: 191 GML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 249
Query: 699 VYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLE 758
           V+S G +L+ +   +      +  +QI+             L +IIDP+ +  + P+  E
Sbjct: 250 VWSLGCILYYMTYGKTPFQQII--NQIS------------KLHAIIDPNHEIEF-PDIPE 294
Query: 759 K-FGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH 792
           K   ++ + CL  + K R ++ E+L H    +Q H
Sbjct: 295 KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 329

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 637 HRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEK 696
           HRDVK  NIL+  +  A + DFG++      + T +   V G+  Y  PE F     T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 697 SDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           +D+Y+   VL+E +      +P    DQ+++
Sbjct: 216 ADIYALTCVLYECLTG----SPPYQGDQLSV 242

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 48/275 (17%)
Query: 539 LAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
           + AIK  N +    Q L  +  EI  L+KL+ +H   +I   D +     +Y  M  G +
Sbjct: 82  IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-QHSDKIIRLYDYEITDQYIYMVMECGNI 140
Query: 597 RSHLF---GSDLPPLT----WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE 649
             + +      + P      WK  L+A          +HT  + GI+H D+K  N L+ +
Sbjct: 141 DLNSWLKKKKSIDPWERKSYWKNMLEA----------VHTIHQHGIVHSDLKPANFLIVD 190
Query: 650 NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKS-----------D 698
             + K+ DFG++        + V  +  G+  Y+ PE       + ++           D
Sbjct: 191 GML-KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSD 249
Query: 699 VYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLE 758
           V+S G +L+ +   +      +  +QI+             L +IIDP+ +  + P+  E
Sbjct: 250 VWSLGCILYYMTYGKTPFQQII--NQIS------------KLHAIIDPNHEIEF-PDIPE 294
Query: 759 K-FGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH 792
           K   ++ + CL  + K R ++ E+L H    +Q H
Sbjct: 295 KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 329

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 25/184 (13%)
Query: 541 AIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILVYEYMANGTLRSH 599
           A+K    Q+    +    E+E L + + +++++ LI F ++     LV+E +  G++ +H
Sbjct: 42  AVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAH 101
Query: 600 LFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMS 656
           +            R+   + AA  L +LHT   +GI HRD+K  NIL    ++    K+ 
Sbjct: 102 IQKQKHFNEREASRVVRDVAAA--LDFLHT---KGIAHRDLKPENILCESPEKVSPVKIC 156
Query: 657 DFGLSKTGPSMEHTHVSTAVK--------GSFGYLDPEY--FWRQQLT---EKSDVYSFG 703
           DF L   G  M+  +  T +         GS  Y+ PE    +  Q T   ++ D++S G
Sbjct: 157 DFDL---GSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLG 213
Query: 704 VVLF 707
           VVL+
Sbjct: 214 VVLY 217

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 22/167 (13%)
Query: 566 LRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWKQRLDACIGA 620
           LRH ++V           + +V EY + G L   +     F  D     ++Q +      
Sbjct: 71  LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS----- 125
Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVA--KMSDFGLSKTGPSMEHTHVSTAVKG 678
             G+ Y H      + HRD+K  N LLD +     K+ DFG SK+  S+ H+   + V G
Sbjct: 126 --GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS--SVLHSQPKSTV-G 177
Query: 679 SFGYLDPEYFWRQQLTEK-SDVYSFGVVLF-EVVCARAVINPTLPKD 723
           +  Y+ PE   +++   K +DV+S GV L+  +V A    +P  PK+
Sbjct: 178 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 224

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + + T    +  Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT---SFMMTPYVVTRYY 191
Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             PE        E  D++S GV++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMI 219

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 31/180 (17%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQN--EMILVYEYMANGTLRSHL------FGSDLPPLTW 610
           E E+L KL H+++V L    +E      +L+ E+   G+L + L      +G  LP   +
Sbjct: 57  EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG--LPESEF 114
Query: 611 KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL----DENFVAKMSDFGLSKTGPS 666
              L   +G   G+++L    E GI+HR++K  NI+     D   V K++DFG ++    
Sbjct: 115 LIVLRDVVG---GMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR---E 165
Query: 667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKS--------DVYSFGVVLFEVVCARAVINP 718
           +E       + G+  YL P+ + R  L +          D++S GV  +          P
Sbjct: 166 LEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           GL ++H    R +++RD+K  NILLDE+   ++SD GL+    S +  H S    G+ GY
Sbjct: 303 GLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASV---GTHGY 355
Query: 683 LDPEYFWRQQLTEKS-DVYSFGVVLFEVVCARAVINPTLPKDQ 724
           + PE   +    + S D +S G +LF+++   +       KD+
Sbjct: 356 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 398

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           GL ++H    R +++RD+K  NILLDE+   ++SD GL+    S +  H S    G+ GY
Sbjct: 304 GLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASV---GTHGY 356
Query: 683 LDPEYFWRQQLTEKS-DVYSFGVVLFEVVCARAVINPTLPKDQ 724
           + PE   +    + S D +S G +LF+++   +       KD+
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 108/262 (41%), Gaps = 39/262 (14%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRS 598
           L  I+R N   E  L  F+ E+    + RH ++V  +G C     + ++       TL S
Sbjct: 62  LIDIERDN---EDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYS 118
Query: 599 HLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF 658
            +  + +     K R  A     +G+ YLH    +GI+H+D+K+ N+  D   V  ++DF
Sbjct: 119 VVRDAKIVLDVNKTRQIAQ-EIVKGMGYLHA---KGILHKDLKSKNVFYDNGKVV-ITDF 173
Query: 659 GLSKTGPSMEHTHVSTAVK---GSFGYLDPEYFWRQ----------QLTEKSDVYSFGVV 705
           GL      ++       ++   G   +L PE   RQ            ++ SDV++ G +
Sbjct: 174 GLFSISGVLQAGRREDKLRIQNGWLCHLAPEII-RQLSPDTEEDKLPFSKHSDVFALGTI 232
Query: 706 LFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEK-FGEIA 764
            +E                ++  +W  K Q   ++   +   +K N S   + K   +I 
Sbjct: 233 WYE----------------LHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDIL 276
Query: 765 EKCLDDEGKNRPTMGEVLWHLE 786
             C   E + RPT  +++  LE
Sbjct: 277 LFCWAFEQEERPTFTKLMDMLE 298

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           GL ++H    R +++RD+K  NILLDE+   ++SD GL+    S +  H S    G+ GY
Sbjct: 304 GLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASV---GTHGY 356
Query: 683 LDPEYFWRQQLTEKS-DVYSFGVVLFEVV 710
           + PE   +    + S D +S G +LF+++
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLL 385

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           GL ++H    R +++RD+K  NILLDE+   ++SD GL+    S +  H S    G+ GY
Sbjct: 304 GLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASV---GTHGY 356
Query: 683 LDPEYFWRQQLTEKS-DVYSFGVVLFEVV 710
           + PE   +    + S D +S G +LF+++
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLL 385

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 18/182 (9%)
Query: 536 DCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSLIGF------CDEQNEMILVY 588
           D  +A  K + P Q++        E+ ++  + H++++SL+         +E  ++ LV 
Sbjct: 49  DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
           E M     +      D   +++            G+ +LH+    GIIHRD+K +NI++ 
Sbjct: 109 ELMDANLXQVIQMELDHERMSY-----LLYQMLXGIKHLHSA---GIIHRDLKPSNIVVK 160
Query: 649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
            +   K+ DFGL++T  +   + + T    +  Y  PE        E  D++S G ++ E
Sbjct: 161 SDXTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 709 VV 710
           +V
Sbjct: 218 MV 219

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 31/180 (17%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQN--EMILVYEYMANGTLRSHL------FGSDLPPLTW 610
           E E+L KL H+++V L    +E      +L+ E+   G+L + L      +G  LP   +
Sbjct: 57  EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG--LPESEF 114
Query: 611 KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL----DENFVAKMSDFGLSKTGPS 666
              L   +G   G+++L    E GI+HR++K  NI+     D   V K++DFG ++    
Sbjct: 115 LIVLRDVVG---GMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR---E 165
Query: 667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKS--------DVYSFGVVLFEVVCARAVINP 718
           +E      ++ G+  YL P+ + R  L +          D++S GV  +          P
Sbjct: 166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 17/174 (9%)
Query: 559 EIEMLSKLRHRHLVSLIGF------CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           E+ +L  + H++++SL+         +E  ++ LV E M     +      D   +++  
Sbjct: 73  ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLL 132
Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
               C     G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +     +
Sbjct: 133 YQMLC-----GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACT---NFM 181
Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN 726
            T    +  Y  PE           D++S G ++ E+V    +   T   DQ N
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWN 235

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           + E E  +   L+H ++V L     E+    LV++ +  G L   +   +     +    
Sbjct: 49  KLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE-----YYSEA 103
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTH 671
           DA     + L  ++     GI+HRD+K  N+LL    +    K++DFGL+      +   
Sbjct: 104 DASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW 163
Query: 672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
              A  G+ GYL PE   +    +  D+++ GV+L+
Sbjct: 164 FGFA--GTPGYLSPEVLRKDPYGKPVDMWACGVILY 197

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
           +++V E +  G L S +        T ++  +        + YLH+     I HRDVK  
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSI---NIAHRDVKPE 190
Query: 644 NILLDE---NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           N+L      N + K++DFG +K   S  H  ++T     + Y+ PE    ++  +  D +
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTS--HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDXW 247
Query: 701 SFGVVLFEVVCA 712
           S GV+ + ++C 
Sbjct: 248 SLGVIXYILLCG 259

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           + E E  +   L+H ++V L     E+    LV++ +  G L   +   +     +    
Sbjct: 49  KLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE-----YYSEA 103
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTH 671
           DA     + L  ++     GI+HRD+K  N+LL    +    K++DFGL+      +   
Sbjct: 104 DASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW 163
Query: 672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
              A  G+ GYL PE   +    +  D+++ GV+L+
Sbjct: 164 FGFA--GTPGYLSPEVLRKDPYGKPVDMWACGVILY 197

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + + T    +  Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVTRYY 191
Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             PE        E  D++S G ++ E+V
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + + T    +  Y
Sbjct: 131 GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVTRYY 184
Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             PE        E  D++S G ++ E+V
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMV 212

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 81/160 (50%), Gaps = 19/160 (11%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG-----SDLPPLT 609
           E + EI ++++L H +L+ L    + +N+++LV EY+  G L   +       ++L  + 
Sbjct: 132 EVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL 191
Query: 610 WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL--DENFVAKMSDFGLSKTGPSM 667
           + +++  C G  R +H ++      I+H D+K  NIL    +    K+ DFGL++     
Sbjct: 192 FMKQI--CEG-IRHMHQMY------ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR 242
Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
           E   V+    G+  +L PE      ++  +D++S GV+ +
Sbjct: 243 EKLKVNF---GTPEFLAPEVVNYDFVSFPTDMWSVGVIAY 279

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 28/174 (16%)
Query: 549 SEQGLA--EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL---------R 597
           S  GL+  + + E  +   L+H H+V L+        + +V+E+M    L          
Sbjct: 64  SSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA 123
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAK 654
             ++   +     +Q L+A       L Y H   +  IIHRDVK  N+LL   + +   K
Sbjct: 124 GFVYSEAVASHYMRQILEA-------LRYCH---DNNIIHRDVKPENVLLASKENSAPVK 173
Query: 655 MSDFGLS-KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
           + DFG++ + G   E   V+    G+  ++ PE   R+   +  DV+  GV+LF
Sbjct: 174 LGDFGVAIQLG---ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF 224

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Query: 554 AEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWK 611
           A F  E ++L     + + +L     + N + LV +Y   G L + L  F   LP    +
Sbjct: 119 ACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMAR 178
Query: 612 QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH 671
             L   + A   +H LH       +HRD+K  NIL+D N   +++DFG       ME   
Sbjct: 179 FYLAEMVIAIDSVHQLH------YVHRDIKPDNILMDMNGHIRLADFG--SCLKLMEDGT 230
Query: 672 VSTAVK-GSFGYLDPEYFW-----RQQLTEKSDVYSFGVVLFEVV 710
           V ++V  G+  Y+ PE        + +   + D +S GV ++E++
Sbjct: 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEML 275

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + + T    +  Y
Sbjct: 139 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYY 192
Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             PE        E  D++S G ++ E++
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMI 220

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
           +++V E +  G L S +        T ++  +        + YLH+     I HRDVK  
Sbjct: 88  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 144
Query: 644 NILLDE---NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           N+L      N + K++DFG +K   S  H  ++      + Y+ PE    ++  +  D++
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTS--HNSLTEPCYTPY-YVAPEVLGPEKYDKSCDMW 201
Query: 701 SFGVVLFEVVCA 712
           S GV+++ ++C 
Sbjct: 202 SLGVIMYILLCG 213

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + + T    +  Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYY 191
Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             PE        E  D++S G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMI 219

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + + T    +  Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYY 191
Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             PE        E  D++S G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMI 219

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +  TEI +   L + H+V   GF ++ + + +V E     +L              K+R 
Sbjct: 88  KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE----------LHKRRK 137
Query: 615 DACIGAAR--------GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS 666
                 AR        G+ YLH      +IHRD+K  N+ L+++   K+ DFGL+ T   
Sbjct: 138 AVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA-TKIE 193
Query: 667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
            +     T   G+  Y+ PE   ++  + + D++S G +L+ ++  +
Sbjct: 194 FDGERKKTLC-GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + + T    +  Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYY 191
Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             PE        E  D++S G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMI 219

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 580 EQNEMILVYEYMANGTLRSHL--FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIH 637
           ++N + LV +Y   G L + L  F   LP    +  +   + A   +H LH       +H
Sbjct: 161 DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH------YVH 214
Query: 638 RDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ----- 692
           RD+K  N+LLD N   +++DFG S    + + T  S+   G+  Y+ PE     +     
Sbjct: 215 RDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 273
Query: 693 LTEKSDVYSFGVVLFEVV 710
              + D +S GV ++E++
Sbjct: 274 YGPECDWWSLGVCMYEML 291

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 559 EIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           EIE+L +  +H ++++L    D+   + +V E M  G L   +        + ++     
Sbjct: 65  EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVL 122
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNIL-LDENF---VAKMSDFGLSKTGPSMEHTHVS 673
               + + YLH    +G++HRD+K +NIL +DE+      ++ DFG +K   +     ++
Sbjct: 123 FTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT 179
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
                +F  + PE   RQ      D++S GV+L+ ++
Sbjct: 180 PCYTANF--VAPEVLERQGYDAACDIWSLGVLLYTML 214

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 580 EQNEMILVYEYMANGTLRSHL--FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIH 637
           ++N + LV +Y   G L + L  F   LP    +  +   + A   +H LH       +H
Sbjct: 145 DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH------YVH 198
Query: 638 RDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ----- 692
           RD+K  N+LLD N   +++DFG S    + + T  S+   G+  Y+ PE     +     
Sbjct: 199 RDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 257
Query: 693 LTEKSDVYSFGVVLFEVV 710
              + D +S GV ++E++
Sbjct: 258 YGPECDWWSLGVCMYEML 275

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           + E E  +   L+H ++V L     E+    L+++ +  G L       D+    +    
Sbjct: 56  KLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL-----FEDIVAREYYSEA 110
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF---VAKMSDFGLSKTGPSMEHTH 671
           DA     + L  +    + G++HR++K  N+LL         K++DFGL+      +   
Sbjct: 111 DASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW 170
Query: 672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
              A  G+ GYL PE   +    +  D+++ GV+L+
Sbjct: 171 FGFA--GTPGYLSPEVLRKDPYGKPVDLWACGVILY 204

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + + T    +  Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT---SFMMTPYVVTRYY 191
Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             PE        E  D++S G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMI 219

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + + T    +  Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPEVVTRYY 191
Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             PE        E  D++S G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMI 219

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + + T    +  Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT---SFMMTPYVVTRYY 191
Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             PE        E  D++S G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMI 219

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           + E E  +   L+H ++V L     E+    LV++ +  G L       D+    +    
Sbjct: 76  KLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL-----FEDIVAREYYSEA 130
Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGLSKTGPSMEHTH 671
           DA     + L  ++   +  I+HRD+K  N+LL    +    K++DFGL+      +   
Sbjct: 131 DASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAW 190
Query: 672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
              A  G+ GYL PE   +    +  D+++ GV+L+
Sbjct: 191 FGFA--GTPGYLSPEVLRKDPYGKPVDIWACGVILY 224

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 22/139 (15%)
Query: 580 EQNEMILVYEYMANGTLRSHL--FGSDLPPL-TWKQRLDACIGAARGLHYLHTGAERGII 636
           E+  ++ +   +   +L+ H   +G+ LP    W    D  +  A    +LH+   +G++
Sbjct: 127 EEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALA----HLHS---QGLV 179
Query: 637 HRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT-- 694
           H DVK  NI L      K+ DFGL           + TA  G     DP Y   + L   
Sbjct: 180 HLDVKPANIFLGPRGRCKLGDFGLL--------VELGTAGAGEVQEGDPRYMAPELLQGS 231
Query: 695 --EKSDVYSFGVVLFEVVC 711
               +DV+S G+ + EV C
Sbjct: 232 YGTAADVFSLGLTILEVAC 250

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + + T    +  Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT---SFMMTPYVVTRYY 191
Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             PE        E  D++S G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMI 219

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 13/112 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQ--------NEMILVYEYMANGTLRSHLFGSDLPPLTW 610
           EI++L  L+H ++V+LI  C  +          + LV+++  +    + L  + L   T 
Sbjct: 67  EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDL--AGLLSNVLVKFTL 124
Query: 611 KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK 662
            +          GL+Y+H      I+HRD+K  N+L+  + V K++DFGL++
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 173

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 85/197 (43%), Gaps = 29/197 (14%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE------MILVYEYMA 592
           L AIK+      QG A    E++++ KL H ++V L  F     E      + LV +Y+ 
Sbjct: 47  LVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 102
Query: 593 NGTLRSHLFGS----DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
               R     S     LP +  K  +       R L Y+H+    GI HRD+K  N+LLD
Sbjct: 103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLD 156
Query: 649 -ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVL 706
            +  V K+ DFG +K    +     + +   S  Y  PE  F     T   DV+S G VL
Sbjct: 157 PDTAVLKLCDFGSAK---QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 213
Query: 707 FEVVCARAVINPTLPKD 723
            E++  +    P  P D
Sbjct: 214 AELLLGQ----PIFPGD 226

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EYM  G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYMPGGDM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             K++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIKVADFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EYM  G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYMPGGDM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             K++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIKVADFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           L +   EI +LS++ H +++ ++   + Q    LV E   +G L    F    P      
Sbjct: 73  LGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHP------ 125
Query: 613 RLDACIGA------ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS 666
           RLD  + +         + YL     + IIHRD+K  NI++ E+F  K+ DFG   +   
Sbjct: 126 RLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFG---SAAY 179
Query: 667 MEHTHVSTAVKGSFGYLDPEYFWRQQLT-EKSDVYSFGVVLFEVV 710
           +E   +     G+  Y  PE          + +++S GV L+ +V
Sbjct: 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 85/197 (43%), Gaps = 29/197 (14%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE------MILVYEYMA 592
           L AIK+      QG A    E++++ KL H ++V L  F     E      + LV +Y+ 
Sbjct: 47  LVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 102
Query: 593 NGTLRSHLFGS----DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
               R     S     LP +  K  +       R L Y+H+    GI HRD+K  N+LLD
Sbjct: 103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLD 156
Query: 649 -ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVL 706
            +  V K+ DFG +K    +     + +   S  Y  PE  F     T   DV+S G VL
Sbjct: 157 PDTAVLKLCDFGSAK---QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 213
Query: 707 FEVVCARAVINPTLPKD 723
            E++  +    P  P D
Sbjct: 214 AELLLGQ----PIFPGD 226

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 85/197 (43%), Gaps = 29/197 (14%)
Query: 539 LAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE------MILVYEYMA 592
           L AIK+      QG A    E++++ KL H ++V L  F     E      + LV +Y+ 
Sbjct: 47  LVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 102
Query: 593 NGTLRSHLFGS----DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
               R     S     LP +  K  +       R L Y+H+    GI HRD+K  N+LLD
Sbjct: 103 ATVYRVARHYSRAKQTLPVIYVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLD 156
Query: 649 -ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVL 706
            +  V K+ DFG +K    +     + +   S  Y  PE  F     T   DV+S G VL
Sbjct: 157 PDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVL 213
Query: 707 FEVVCARAVINPTLPKD 723
            E++  +    P  P D
Sbjct: 214 AELLLGQ----PIFPGD 226

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 557 ETEIEMLSKLRHRHLVSLIGF----CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           ETE+     LRH +++  I           ++ L+  Y   G+L  +L    L  L    
Sbjct: 79  ETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVS 135
Query: 613 RLDACIGAARGLHYLH-----TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPS 666
            L   +  A GL +LH     T  +  I HRD+K+ NIL+ +N    ++D GL+     S
Sbjct: 136 CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS 195
Query: 667 MEHTHVSTAVK-GSFGYLDPEYFWRQQLTE------KSDVYSFGVVLFEVVCARAVINPT 719
                V    + G+  Y+ PE        +      + D+++FG+VL+EV  AR +++  
Sbjct: 196 TNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNG 253
Query: 720 LPKD 723
           + +D
Sbjct: 254 IVED 257

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 558 TEIEMLSKLRHR-HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA 616
           TE ++L  +R    LV+L      + ++ L+ +Y+  G L +HL  S     T +  +  
Sbjct: 107 TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL--SQRERFT-EHEVQI 163
Query: 617 CIGA-ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
            +G     L +LH   + GII+RD+K  NILLD N    ++DFGLSK   + E T  +  
Sbjct: 164 YVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE-TERAYD 219
Query: 676 VKGSFGYLDPEYF--WRQQLTEKSDVYSFGVVLFEVVCA 712
             G+  Y+ P+          +  D +S GV+++E++  
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 13/113 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQ--------NEMILVYEYMANGTLRSHLFGSDLPPLTW 610
           EI++L  L+H ++V+LI  C  +          + LV+++  +    + L  + L   T 
Sbjct: 67  EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDL--AGLLSNVLVKFTL 124
Query: 611 KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT 663
            +          GL+Y+H      I+HRD+K  N+L+  + V K++DFGL++ 
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARA 174

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 556 FETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWKQR 613
           F  E ++L     R +  L     ++N + LV EY   G L + L  FG  +P    +  
Sbjct: 108 FREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFY 167
Query: 614 LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS 673
           L   + A   +H L      G +HRD+K  NILLD     +++DFG S      + T  S
Sbjct: 168 LAEIVMAIDSVHRL------GYVHRDIKPDNILLDRCGHIRLADFG-SCLKLRADGTVRS 220
Query: 674 TAVKGSFGYLDPE 686
               G+  YL PE
Sbjct: 221 LVAVGTPDYLSPE 233

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 13/113 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQ--------NEMILVYEYMANGTLRSHLFGSDLPPLTW 610
           EI++L  L+H ++V+LI  C  +          + LV+++  +    + L  + L   T 
Sbjct: 66  EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDL--AGLLSNVLVKFTL 123
Query: 611 KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT 663
            +          GL+Y+H      I+HRD+K  N+L+  + V K++DFGL++ 
Sbjct: 124 SEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARA 173

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 22/184 (11%)
Query: 557 ETEIEMLSKLRHRHLVSLIGF----CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           ETE+     LRH +++  I           ++ L+  Y   G+L  +L  + L  ++   
Sbjct: 50  ETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-- 107
Query: 613 RLDACIGAARGLHYLH-----TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPS 666
            L   +  A GL +LH     T  +  I HRD+K+ NIL+ +N    ++D GL+     S
Sbjct: 108 -LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS 166
Query: 667 MEHTHVSTAVK-GSFGYLDPEYFWRQQLTE------KSDVYSFGVVLFEVVCARAVINPT 719
                V    + G+  Y+ PE        +      + D+++FG+VL+EV  AR +++  
Sbjct: 167 TNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNG 224
Query: 720 LPKD 723
           + +D
Sbjct: 225 IVED 228

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 57  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 115
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+DE  
Sbjct: 116 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQG 165
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 166 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 220
Query: 712 A 712
Sbjct: 221 G 221

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +  TEI +   L + H+V   GF ++ + + +V E     +L              K+R 
Sbjct: 88  KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE----------LHKRRK 137
Query: 615 DACIGAAR--------GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS 666
                 AR        G+ YLH      +IHRD+K  N+ L+++   K+ DFGL+     
Sbjct: 138 AVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT---K 191
Query: 667 MEHT-HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           +E        + G+  Y+ PE   ++  + + D++S G +L+ ++  +
Sbjct: 192 IEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 13/113 (11%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNE--------MILVYEYMANGTLRSHLFGSDLPPLTW 610
           EI++L  L+H ++V+LI  C  +          + LV+++  +    + L  + L   T 
Sbjct: 67  EIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDL--AGLLSNVLVKFTL 124
Query: 611 KQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT 663
            +          GL+Y+H      I+HRD+K  N+L+  + V K++DFGL++ 
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARA 174

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 91  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 149
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 150 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 199
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K       T     + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 200 YIQVTDFGFAKRVKGATWT-----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 712 A 712
Sbjct: 255 G 255

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 557 ETEIEMLSKLRHRHLVSLIGF----CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
           ETE+     LRH +++  I           ++ L+  Y   G+L  +L    L  L    
Sbjct: 50  ETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVS 106
Query: 613 RLDACIGAARGLHYLH-----TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPS 666
            L   +  A GL +LH     T  +  I HRD+K+ NIL+ +N    ++D GL+     S
Sbjct: 107 CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS 166
Query: 667 MEHTHVSTAVK-GSFGYLDPEYFWRQQLTE------KSDVYSFGVVLFEVVCARAVINPT 719
                V    + G+  Y+ PE        +      + D+++FG+VL+EV  AR +++  
Sbjct: 167 TNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNG 224
Query: 720 LPKD 723
           + +D
Sbjct: 225 IVED 228

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   + +      +  Y
Sbjct: 140 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMVPFVVTRYY 193
Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             PE        E  D++S G ++ E++
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMI 221

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +  TEI +   L + H+V   GF ++ + + +V E     +L              K+R 
Sbjct: 88  KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE----------LHKRRK 137
Query: 615 DACIGAAR--------GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS 666
                 AR        G+ YLH      +IHRD+K  N+ L+++   K+ DFGL+     
Sbjct: 138 AVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT---K 191
Query: 667 MEHT-HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           +E        + G+  Y+ PE   ++  + + D++S G +L+ ++  +
Sbjct: 192 IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFAEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 25/169 (14%)
Query: 555 EFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL 614
           +  TEI +   L + H+V   GF ++ + + +V E     +L              K+R 
Sbjct: 72  KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE----------LHKRRK 121
Query: 615 DACIGAAR--------GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS 666
                 AR        G+ YLH      +IHRD+K  N+ L+++   K+ DFGL+     
Sbjct: 122 AVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT---K 175
Query: 667 MEHT-HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA 714
           +E        + G+  Y+ PE   ++  + + D++S G +L+ ++  + 
Sbjct: 176 IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 224

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L E E    E  +L  +    LV L   F D  N + +V EY   G +
Sbjct: 70  AMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYAPGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+++D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             K++DFGL+K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIKVTDFGLAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 65  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 123
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 124 FSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 173
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 174 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 228
Query: 712 A 712
Sbjct: 229 G 229

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 91  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 149
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 150 FSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 199
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 200 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 712 A 712
Sbjct: 255 G 255

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 83/194 (42%), Gaps = 24/194 (12%)
Query: 540 AAIKRAN-PQSEQGLAEFET-EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLR 597
            AIKR      E+G+      E+ +L +L+HR+++ L       + + L++EY  N   +
Sbjct: 62  VAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKK 121
Query: 598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL-----DENFV 652
                 D+     K  L   I    G+++ H+   R  +HRD+K  N+LL      E  V
Sbjct: 122 YMDKNPDVSMRVIKSFLYQLIN---GVNFCHS---RRCLHRDLKPQNLLLSVSDASETPV 175
Query: 653 AKMSDFGLSKTG--PSMEHTHVSTAVKGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEV 709
            K+ DFGL++    P  + TH       +  Y  PE     +  +   D++S   +  E+
Sbjct: 176 LKIGDFGLARAFGIPIRQFTHEII----TLWYRPPEILLGSRHYSTSVDIWSIACIWAEM 231
Query: 710 VCARAVINPTLPKD 723
           +       P  P D
Sbjct: 232 LMK----TPLFPGD 241

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 15/141 (10%)
Query: 540 AAIKRANPQSEQGL--AEFETEIEMLSKLRHRHLVSLIGFCDEQN-----EMILVYEYMA 592
            AIK+ N   E  +       EI +L++L+  +++ L      ++     E+ +V E +A
Sbjct: 56  VAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLE-IA 114
Query: 593 NGTLRSHLFGSDLPPLTWKQRLDACI-GAARGLHYLHTGAERGIIHRDVKTTNILLDENF 651
           +  L+  LF +  P    +Q +   +     G  ++H   E GIIHRD+K  N LL+++ 
Sbjct: 115 DSDLKK-LFKT--PIFLTEQHVKTILYNLLLGEKFIH---ESGIIHRDLKPANCLLNQDC 168
Query: 652 VAKMSDFGLSKTGPSMEHTHV 672
             K+ DFGL++T  S +  H+
Sbjct: 169 SVKICDFGLARTINSDKDIHI 189

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 71  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 129
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 130 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 179
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 180 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 712 A 712
Sbjct: 235 G 235

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 566 LRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWKQRLDACIGA 620
           LRH ++V           + +V EY + G L   +     F  D     ++Q +      
Sbjct: 72  LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS----- 126
Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVA--KMSDFGLSKTGPSMEHTHVSTAVKG 678
             G+ Y H      + HRD+K  N LLD +     K+  FG SK+  S+ H+   + V G
Sbjct: 127 --GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS--SVLHSQPKSTV-G 178
Query: 679 SFGYLDPEYFWRQQLTEK-SDVYSFGVVLF-EVVCARAVINPTLPKD 723
           +  Y+ PE   +++   K +DV+S GV L+  +V A    +P  PK+
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 62/132 (46%), Gaps = 10/132 (7%)
Query: 584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
           ++++ E M  G L S +        T ++  +        + +LH+     I HRDVK  
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPE 157
Query: 644 NILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           N+L    +++ V K++DFG +K         + T     + Y+ PE    ++  +  D++
Sbjct: 158 NLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPY-YVAPEVLGPEKYDKSCDMW 213
Query: 701 SFGVVLFEVVCA 712
           S GV+++ ++C 
Sbjct: 214 SLGVIMYILLCG 225

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             K++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIKVADFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 34/189 (17%)
Query: 540 AAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMA----NGT 595
            A+KR  P+     +  + E+++L +    H   +  FC E++     ++Y+A      T
Sbjct: 51  VAVKRILPEC---FSFADREVQLLRE-SDEHPNVIRYFCTEKDRQ---FQYIAIELCAAT 103
Query: 596 LRSHLFGSD-----LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE- 649
           L+ ++   D     L P+T  Q+         GL +LH+     I+HRD+K  NIL+   
Sbjct: 104 LQEYVEQKDFAHLGLEPITLLQQ------TTSGLAHLHS---LNIVHRDLKPHNILISMP 154
Query: 650 ----NFVAKMSDFGLSKTGPSMEHTHV-STAVKGSFGYLDPEYF---WRQQLTEKSDVYS 701
                  A +SDFGL K      H+    + V G+ G++ PE      ++  T   D++S
Sbjct: 155 NAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFS 214
Query: 702 FGVVLFEVV 710
            G V + V+
Sbjct: 215 AGCVFYYVI 223

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 62/132 (46%), Gaps = 10/132 (7%)
Query: 584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT 643
           ++++ E M  G L S +        T ++  +        + +LH+     I HRDVK  
Sbjct: 82  LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPE 138
Query: 644 NILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           N+L    +++ V K++DFG +K         + T     + Y+ PE    ++  +  D++
Sbjct: 139 NLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPY-YVAPEVLGPEKYDKSCDMW 194
Query: 701 SFGVVLFEVVCA 712
           S GV+++ ++C 
Sbjct: 195 SLGVIMYILLCG 206

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 91/170 (53%), Gaps = 33/170 (19%)
Query: 559 EIEMLSKLR-HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQR---- 613
           E+EML + + HR+++ LI F +E++   LV+E M  G++ SH+          K+R    
Sbjct: 60  EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH---------KRRHFNE 110
Query: 614 LDACI---GAARGLHYLHTGAERGIIHRDVKTTNILLDE-NFVA--KMSDFGL-SKTGPS 666
           L+A +     A  L +LH    +GI HRD+K  NIL +  N V+  K+ DFGL S    +
Sbjct: 111 LEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLN 167
Query: 667 MEHTHVST----AVKGSFGYLDPEYF--WRQQLT---EKSDVYSFGVVLF 707
            + + +ST       GS  Y+ PE    + ++ +   ++ D++S GV+L+
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILY 217

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGF---CDEQNEMI---LVYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     E+ +++   LV +Y+     R     S     LP +
Sbjct: 63  ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 123 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 173
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAV 715
                + +   S  Y  PE  F     T   DV+S G VL E++  + +
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 566 LRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWKQRLDACIGA 620
           LRH ++V           + +V EY + G L   +     F  D     ++Q +      
Sbjct: 72  LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS----- 126
Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVA--KMSDFGLSKTGPSMEHTHVSTAVKG 678
             G+ Y H      + HRD+K  N LLD +     K+  FG SK+  S+ H+     V G
Sbjct: 127 --GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS--SVLHSQPKDTV-G 178
Query: 679 SFGYLDPEYFWRQQLTEK-SDVYSFGVVLF-EVVCARAVINPTLPKD 723
           +  Y+ PE   +++   K +DV+S GV L+  +V A    +P  PK+
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFC----DEQNEMIL--VYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     ++++E+ L  V +Y+     R     S     LP +
Sbjct: 97  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 156
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 157 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 207
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAV 715
                + +   S  Y  PE  F     T   DV+S G VL E++  + +
Sbjct: 208 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 17/160 (10%)
Query: 559 EIEMLSKLR-HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGS-DLPPLTWKQRLDA 616
           E+++L K+  H +++ L    +      LV++ M  G L  +L     L     ++ + A
Sbjct: 73  EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
            +     LH L+      I+HRD+K  NILLD++   K++DFG S     ++      +V
Sbjct: 133 LLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSC---QLDPGEKLRSV 183
Query: 677 KGSFGYLDPEYFW------RQQLTEKSDVYSFGVVLFEVV 710
            G+  YL PE              ++ D++S GV+++ ++
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 223

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L E E    E  +L  +    LV L   F D  N + +V EY   G +
Sbjct: 70  AMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYAPGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+++D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFGL+K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGLAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 25/177 (14%)
Query: 559 EIEMLSKLRHRHLVSLIGFC----DEQNEMIL--VYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     ++++E+ L  V +Y+     R     S     LP +
Sbjct: 91  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 150
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 151 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 201
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
                + +   S  Y  PE  F     T   DV+S G VL E++  +    P  P D
Sbjct: 202 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGD 254

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 21/169 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNE------MILVYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     E      + LV +Y+     R     S     LP +
Sbjct: 99  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 158
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 159 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 209
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAV 715
                + +   S  Y  PE  F     T   DV+S G VL E++  + +
Sbjct: 210 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 258

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 77/177 (43%), Gaps = 25/177 (14%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNE------MILVYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     E      + LV +Y+     R     S     LP +
Sbjct: 68  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 127
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 128 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 178
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
                + +   S  Y  PE  F     T   DV+S G VL E++  +    P  P D
Sbjct: 179 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGD 231

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFC----DEQNEMIL--VYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     ++++E+ L  V +Y+     R     S     LP +
Sbjct: 82  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 141
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 142 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 192
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAV 715
                + +   S  Y  PE  F     T   DV+S G VL E++  + +
Sbjct: 193 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 241

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFC----DEQNEMIL--VYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     ++++E+ L  V +Y+     R     S     LP +
Sbjct: 97  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 156
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 157 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 207
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAV 715
                + +   S  Y  PE  F     T   DV+S G VL E++  + +
Sbjct: 208 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 71  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEM 129
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 130 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 179
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K       T     + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 180 YIQVTDFGFAKRVKGRTWT-----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 712 A 712
Sbjct: 235 G 235

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFC----DEQNEMIL--VYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     ++++E+ L  V +Y+     R     S     LP +
Sbjct: 75  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 134
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 135 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 185
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAV 715
                + +   S  Y  PE  F     T   DV+S G VL E++  + +
Sbjct: 186 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFC----DEQNEMIL--VYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     ++++E+ L  V +Y+     R     S     LP +
Sbjct: 75  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 134
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 135 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 185
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAV 715
                + +   S  Y  PE  F     T   DV+S G VL E++  + +
Sbjct: 186 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 21/169 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNE------MILVYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     E      + LV +Y+     R     S     LP +
Sbjct: 101 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 160
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 161 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 211
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAV 715
                + +   S  Y  PE  F     T   DV+S G VL E++  + +
Sbjct: 212 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 260

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 77/177 (43%), Gaps = 25/177 (14%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNE------MILVYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     E      + LV +Y+     R     S     LP +
Sbjct: 142 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 201
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 202 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 252
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
                + +   S  Y  PE  F     T   DV+S G VL E++  +    P  P D
Sbjct: 253 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGD 305

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFC----DEQNEMIL--VYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     ++++E+ L  V +Y+     R     S     LP +
Sbjct: 71  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 130
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 131 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 181
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAV 715
                + +   S  Y  PE  F     T   DV+S G VL E++  + +
Sbjct: 182 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 230

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 559 EIEMLSKLR-HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGS-DLPPLTWKQRLDA 616
           E+++L K+  H +++ L    +      LV++ M  G L  +L     L     ++ + A
Sbjct: 60  EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
            +     LH L+      I+HRD+K  NILLD++   K++DFG S     ++       V
Sbjct: 120 LLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEKLREV 170
Query: 677 KGSFGYLDPEYFW------RQQLTEKSDVYSFGVVLFEVV 710
            G+  YL PE              ++ D++S GV+++ ++
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 210

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 559 EIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           EIE+L +  +H ++++L    D+   + +V E    G L   +        + ++     
Sbjct: 65  EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF--FSEREASAVL 122
Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNIL-LDENF---VAKMSDFGLSKTGPSMEHTHVS 673
               + + YLH    +G++HRD+K +NIL +DE+      ++ DFG +K   +      +
Sbjct: 123 FTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXT 179
Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLF 707
                +F  + PE   RQ      D++S GV+L+
Sbjct: 180 PCYTANF--VAPEVLERQGYDAACDIWSLGVLLY 211

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++++  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 63  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEM 121
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 122 FSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 171
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 172 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 226
Query: 712 A 712
Sbjct: 227 G 227

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+++D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 21/164 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFC----DEQNEMIL--VYEYMANGTLRSHL----FGSDLPPL 608
           E++++  ++H ++V L  F     D+++E+ L  V EY+     R+          +P L
Sbjct: 82  ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPML 141
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +   +   R L Y+H+    GI HRD+K  N+LLD  + V K+ DFG +K   + 
Sbjct: 142 LIKLYMYQLL---RSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVV 710
           E  +VS     S  Y  PE  F     T   D++S G V+ E++
Sbjct: 196 E-PNVSXIC--SRYYRAPELIFGATNYTTNIDIWSTGCVMAELM 236

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 71  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEM 129
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 130 FSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 179
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 180 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 712 A 712
Sbjct: 235 G 235

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 81/209 (38%), Gaps = 50/209 (23%)
Query: 542 IKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL- 600
           I++ NP+    +   +TE+ ++ KL H ++  L    +++  + LV E    G L   L 
Sbjct: 64  IRQINPKD---VERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLN 120
Query: 601 --------------FGSDLPP-------------------LTWKQRLDACIGAAR----G 623
                           + + P                   L + QR        R     
Sbjct: 121 VFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180
Query: 624 LHYLHTGAERGIIHRDVKTTNILLDEN--FVAKMSDFGLSKTGPSMEH--THVSTAVKGS 679
           LHYLH    +GI HRD+K  N L   N  F  K+ DFGLSK    + +   +  T   G+
Sbjct: 181 LHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGT 237
Query: 680 FGYLDPEYF--WRQQLTEKSDVYSFGVVL 706
             ++ PE      +    K D +S GV+L
Sbjct: 238 PYFVAPEVLNTTNESYGPKCDAWSAGVLL 266

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 56  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEM 114
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 115 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 164
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K       T     + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 165 YIQVTDFGFAKRVKGRTWT-----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 219
Query: 712 A 712
Sbjct: 220 G 220

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 21/169 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNE------MILVYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     E      + LV +Y+     R     S     LP +
Sbjct: 67  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 126
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 127 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 177
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAV 715
                + +   S  Y  PE  F     T   DV+S G VL E++  + +
Sbjct: 178 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 226

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFC----DEQNEMIL--VYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     ++++E+ L  V +Y+     R     S     LP +
Sbjct: 76  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 135
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 136 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 186
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAV 715
                + +   S  Y  PE  F     T   DV+S G VL E++  + +
Sbjct: 187 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 235

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFC----DEQNEMIL--VYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     ++++E+ L  V +Y+     R     S     LP +
Sbjct: 63  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 123 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 173
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAV 715
                + +   S  Y  PE  F     T   DV+S G VL E++  + +
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFC----DEQNEMIL--VYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     ++++E+ L  V +Y+     R     S     LP +
Sbjct: 63  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 123 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 173
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAV 715
                + +   S  Y  PE  F     T   DV+S G VL E++  + +
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY   G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYAPGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+++D+  
Sbjct: 129 FSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             K++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIKVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Query: 540 AAIKRANPQSEQGL--AEFETEIEMLSKLRHRHLVSLIGFCDEQN-----EMILVYEYMA 592
            AIK+ N   E  +       EI +L++L+  +++ L       +     E+ +V E +A
Sbjct: 54  VAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE-IA 112
Query: 593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV 652
           +  L+  LF + +  LT +           G +++H   E GIIHRD+K  N LL+++  
Sbjct: 113 DSDLKK-LFKTPIF-LTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCS 167
Query: 653 AKMSDFGLSKTGPSMEHTHV 672
            K+ DFGL++T  S + T++
Sbjct: 168 VKVCDFGLARTINSEKDTNI 187

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFC----DEQNEMIL--VYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     ++++E+ L  V +Y+     R     S     LP +
Sbjct: 64  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 123
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 124 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 174
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAV 715
                + +   S  Y  PE  F     T   DV+S G VL E++  + +
Sbjct: 175 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 223

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 559 EIEMLSKLRHRHLVSLIGFC----DEQNEMIL--VYEYMANGTLRSHLFGS----DLPPL 608
           E++++ KL H ++V L  F     ++++E+ L  V +Y+     R     S     LP +
Sbjct: 63  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSM 667
             K  +       R L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K    +
Sbjct: 123 YVKLYMYQLF---RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QL 173
Query: 668 EHTHVSTAVKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAV 715
                + +   S  Y  PE  F     T   DV+S G VL E++  + +
Sbjct: 174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 559 EIEMLSKLR-HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGS-DLPPLTWKQRLDA 616
           E+++L K+  H +++ L    +      LV++ M  G L  +L     L     ++ + A
Sbjct: 73  EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
            +     LH L+      I+HRD+K  NILLD++   K++DFG S     ++       V
Sbjct: 133 LLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEKLREV 183
Query: 677 KGSFGYLDPEYFW------RQQLTEKSDVYSFGVVLFEVV 710
            G+  YL PE              ++ D++S GV+++ ++
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 223

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 232
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 233 YHGRSAAVWSLGILLYDMVCG 253

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 182 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 237
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 238 YHGRSAAVWSLGILLYDMVCG 258

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 71  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEM 129
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 130 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 179
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 180 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 712 A 712
Sbjct: 235 G 235

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 217
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 218 YHGRSAAVWSLGILLYDMVCG 238

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 218
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 219 YHGRSAAVWSLGILLYDMVCG 239

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 232
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 233 YHGRSAAVWSLGILLYDMVCG 253

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 218
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 219 YHGRSAAVWSLGILLYDMVCG 239

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 217
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 218 YHGRSAAVWSLGILLYDMVCG 238

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 63  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEM 121
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 122 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 171
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 172 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 226
Query: 712 A 712
Sbjct: 227 G 227

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 218
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 219 YHGRSAAVWSLGILLYDMVCG 239

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 232
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 233 YHGRSAAVWSLGILLYDMVCG 253

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 71  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEM 129
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 130 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 179
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 180 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 712 A 712
Sbjct: 235 G 235

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 218
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 219 YHGRSAAVWSLGILLYDMVCG 239

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 217
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 218 YHGRSAAVWSLGILLYDMVCG 238

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 71  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEM 129
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 130 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 179
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 180 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 712 A 712
Sbjct: 235 G 235

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 217
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 218 YHGRSAAVWSLGILLYDMVCG 238

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY   G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYAPGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+++D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             K++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIKVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 204
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 205 YHGRSAAVWSLGILLYDMVCG 225

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 71  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEM 129
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 130 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 179
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 180 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 712 A 712
Sbjct: 235 G 235

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 204
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 205 YHGRSAAVWSLGILLYDMVCG 225

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 190
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 191 YHGRSAAVWSLGILLYDMVCG 211

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 205
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 206 YHGRSAAVWSLGILLYDMVCG 226

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 205
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 206 YHGRSAAVWSLGILLYDMVCG 226

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 169 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 224
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 225 YHGRSAAVWSLGILLYDMVCG 245

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 205
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 206 YHGRSAAVWSLGILLYDMVCG 226

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 190
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 191 YHGRSAAVWSLGILLYDMVCG 211

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 91  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEM 149
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 150 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 199
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 200 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 712 A 712
Sbjct: 255 G 255

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 185
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 186 YHGRSAAVWSLGILLYDMVCG 206

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 189
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 190 YHGRSAAVWSLGILLYDMVCG 210

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 133 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 188
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 189 YHGRSAAVWSLGILLYDMVCG 209

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY   G +
Sbjct: 71  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYAPGGEM 129
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+++D+  
Sbjct: 130 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQG 179
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             K++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 180 YIKVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 712 A 712
Sbjct: 235 G 235

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 185
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 186 YHGRSAAVWSLGILLYDMVCG 206

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 190
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 191 YHGRSAAVWSLGILLYDMVCG 211

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 189
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 190 YHGRSAAVWSLGILLYDMVCG 210

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
Query: 559 EIEMLSKLRHRHLVSLIGFC-----DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQR 613
           EI +L++L H H+V ++        ++ +E+ +V E +A+   +  LF + +  LT    
Sbjct: 102 EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKK-LFRTPVY-LTELHI 158
Query: 614 LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT 663
                    G+ Y+H+    GI+HRD+K  N L++++   K+ DFGL++T
Sbjct: 159 KTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLART 205

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 185
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 186 YHGRSAAVWSLGILLYDMVCG 206

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 634 GIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           G++HRD+K  NIL+D N    K+ DFG   +G  ++ T V T   G+  Y  PE+    +
Sbjct: 157 GVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHR 212
Query: 693 LTEKS-DVYSFGVVLFEVVCA 712
              +S  V+S G++L+++VC 
Sbjct: 213 YHGRSAAVWSLGILLYDMVCG 233

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+A G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL P     +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSN-LYMVMEYVPGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSN-LYMVMEYVPGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 541 AIKRANPQSEQGLAEFE---TEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEYMANGTL 596
           A+K  + Q    L + E    E  +L  +    LV L   F D  N + +V EY+  G +
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSN-LYMVMEYVPGGEM 128
Query: 597 RSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENF 651
            SHL   G    P        A   AA+      YLH+     +I+RD+K  N+L+D+  
Sbjct: 129 FSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             +++DFG +K          +  + G+  YL PE    +   +  D ++ GV+++E+  
Sbjct: 179 YIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 712 A 712
Sbjct: 234 G 234

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 22/148 (14%)
Query: 571 LVSL-IGFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWKQRLDACIGAAR---GL 624
           LV L   F D  N + +V EY   G + SHL   G    P        A   AA+     
Sbjct: 104 LVKLEFSFKDNSN-LYMVLEYAPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTF 155
Query: 625 HYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLD 684
            YLH+     +I+RD+K  N+L+D+    K++DFG +K          +  + G+  YL 
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPEYLA 207
Query: 685 PEYFWRQQLTEKSDVYSFGVVLFEVVCA 712
           PE    +   +  D ++ GV+++E+   
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 539 LAAIKRANPQSEQGLAEFET--EIEMLSKLRHRHLVSLIGF-----CDEQNEMILVYEYM 591
           + AIK+  P  ++ L    T  EI++L   +H +++++         +  NE+ ++ E M
Sbjct: 38  IVAIKKIEP-FDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM 96
Query: 592 ANGTLR---SHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD 648
                R   + +   D       Q L       R +  LH      +IHRD+K +N+L++
Sbjct: 97  QTDLHRVISTQMLSDDHIQYFIYQTL-------RAVKVLHGS---NVIHRDLKPSNLLIN 146
Query: 649 ENFVAKMSDFGLSK---------TGPSMEHTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSD 698
            N   K+ DFGL++         + P+ + + ++  V   + Y  PE      + +   D
Sbjct: 147 SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRW-YRAPEVMLTSAKYSRAMD 205
Query: 699 VYSFGVVLFEVVCARAV 715
           V+S G +L E+   R +
Sbjct: 206 VWSCGCILAELFLRRPI 222

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 21/141 (14%)
Query: 577 FCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWKQRLDACIGAAR---GLHYLHTGA 631
           F D  N + +V EY   G + SHL   G    P        A   AA+      YLH+  
Sbjct: 111 FKDNSN-LYMVMEYAPGGEMFSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHS-- 160
Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ 691
              +I+RD+K  N+++D+    K++DFG +K          +  + G+  YL PE    +
Sbjct: 161 -LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSK 214
Query: 692 QLTEKSDVYSFGVVLFEVVCA 712
              +  D ++ GV+++E+   
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	851
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	0.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-135
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-130
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-82
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-64
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-63
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	6e-61
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-59
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	4e-59
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-58
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-58
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-57
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-57
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-56
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-52
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-52
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-51
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-50
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	6e-40
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-38
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-38
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-38
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-38
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-38
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-38
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-38
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-38
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	6e-38
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	6e-38
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	6e-38
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	7e-38
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-37
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-37
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-37
2jwp_A	174	Malectin, MGC80075; sugar binding, sugar binding p	4e-37
2jwp_A	174	Malectin, MGC80075; sugar binding, sugar binding p	2e-23
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	4e-37
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	5e-37
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	8e-37
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-36
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-36
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-36
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-36
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-36
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-36
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	3e-36
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-36
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-36
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-36
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-36
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-36
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	4e-36
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-36
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	5e-36
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	7e-36
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	7e-36
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	7e-36
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	8e-36
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	8e-36
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	9e-36
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-35
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-35
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-35
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-35
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-35
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-35
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-35
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-35
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-35
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-35
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-35
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-35
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-35
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-35
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-35
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	5e-35
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-35
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	7e-35
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	8e-35
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-34
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-34
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	7e-34
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-33
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-31
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-30
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	6e-30
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	6e-30
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	8e-30
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	9e-30
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-29
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-29
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-29
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-29
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-28
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-28
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-28
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-28
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-28
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-28
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-28
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-27
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	5e-27
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-27
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	7e-27
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	8e-27
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-26
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-26
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-26
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-26
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	5e-26
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	8e-26
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-25
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-25
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-25
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	5e-25
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	7e-25
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	9e-25
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-24
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-24
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-24
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-24
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-24
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-24
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	5e-24
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	7e-24
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	7e-24
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-23
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-23
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	5e-05
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-23
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-23
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	3e-23
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-23
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	4e-23
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-23
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	6e-23
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	7e-23
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	8e-23
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	8e-23
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	8e-23
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-22
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-22
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-22
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-22
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-22
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-22
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-22
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-22
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-22
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	5e-22
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	6e-22
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	6e-22
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	9e-22
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-21
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-21
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-21
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-21
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-21
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	4e-21
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	5e-21
3an0_A	340	Dual specificity mitogen-activated protein kinase;	5e-21
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	6e-21
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	6e-21
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	8e-21
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	8e-21
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-20
3uqc_A	286	Probable conserved transmembrane protein; structur	3e-20
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	8e-20
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-19
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-19
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-19
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	4e-19
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	6e-19
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	6e-19
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-18
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	3e-18
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-18
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-11
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	6e-18
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-17
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-17
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	3e-17
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-17
3o0g_A	292	Cell division protein kinase 5; kinase activator c	3e-16
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	4e-16
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	4e-16
3niz_A	311	Rhodanese family protein; structural genomics, str	4e-16
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	5e-16
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	7e-16
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-15
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-15
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-15
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-15
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-15
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	3e-15
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	8e-15
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	8e-15
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	8e-15
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	9e-15
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-14
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-14
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-14
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-14
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-14
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	5e-14
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	6e-14
3rp9_A	458	Mitogen-activated protein kinase; structural genom	8e-14
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	9e-14
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-13
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-13
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-13
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-13
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-13
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-13
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	3e-13
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	4e-13
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	4e-13
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	5e-13
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	6e-13
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	8e-13
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-12
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-12
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	7e-12
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-10
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-10
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	4e-10
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	5e-09
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-08
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	5e-08
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	1e-07
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	1e-07
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	7e-07
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-06
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-06
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	3e-06
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	3e-06
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	5e-06
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	3e-05
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	6e-05

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  559 bits (1442), Expect = 0.0
 Identities = 181/320 (56%), Positives = 231/320 (72%), Gaps = 5/320 (1%)

Query: 477 NSTANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIED 536
           +  + A  S    L  S  +     R  L ++  ATNNFD   +IG G FGKV+KG + D
Sbjct: 3   SKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD 62

Query: 537 CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTL 596
               A+KR  P+S QG+ EFETEIE LS  RH HLVSLIGFCDE+NEMIL+Y+YM NG L
Sbjct: 63  GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL 122

Query: 597 RSHLFGSDLP--PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAK 654
           + HL+GSDLP   ++W+QRL+ CIGAARGLHYLHT A   IIHRDVK+ NILLDENFV K
Sbjct: 123 KRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPK 179

Query: 655 MSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA 714
           ++DFG+SK G  ++ TH+ST VKG+ GY+DPEYF + +LTEKSDVYSFGVVLFEV+CAR+
Sbjct: 180 ITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS 239

Query: 715 VINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKN 774
            I  +LP++ +NLA+WA++      L+ I+DP+L     PESL KFG+ A KCL    ++
Sbjct: 240 AIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSED 299

Query: 775 RPTMGEVLWHLEYVLQLHEA 794
           RP+MG+VLW LEY L+L E+
Sbjct: 300 RPSMGDVLWKLEYALRLQES 319

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  405 bits (1042), Expect = e-135
 Identities = 102/301 (33%), Positives = 169/301 (56%), Gaps = 20/301 (6%)

Query: 501 KRFTLAEIRVATNNFDESLM------IGVGGFGKVFKGEIEDCTLAAIKR----ANPQSE 550
             F+  E++  TNNFDE  +      +G GGFG V+KG + + T  A+K+     +  +E
Sbjct: 13  HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTE 71

Query: 551 QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSD-LPPLT 609
           +   +F+ EI++++K +H +LV L+GF  + +++ LVY YM NG+L   L   D  PPL+
Sbjct: 72  ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS 131

Query: 610 WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH 669
           W  R     GAA G+++LH   E   IHRD+K+ NILLDE F AK+SDFGL++       
Sbjct: 132 WHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188

Query: 670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
           T +++ + G+  Y+ PE   R ++T KSD+YSFGVVL E++     ++         L D
Sbjct: 189 TVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ--LLLD 245

Query: 730 WAMK-WQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV 788
              +   ++++++  ID  +  +    S+E    +A +CL ++   RP + +V   L+ +
Sbjct: 246 IKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304

Query: 789 L 789
            
Sbjct: 305 T 305

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  390 bits (1005), Expect = e-130
 Identities = 125/307 (40%), Positives = 185/307 (60%), Gaps = 8/307 (2%)

Query: 500 GKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGL-AEFET 558
            KRF+L E++VA++NF    ++G GGFGKV+KG + D TL A+KR   +  QG   +F+T
Sbjct: 17  LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQT 76

Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG--SDLPPLTWKQRLDA 616
           E+EM+S   HR+L+ L GFC    E +LVY YMANG++ S L       PPL W +R   
Sbjct: 77  EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136

Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
            +G+ARGL YLH   +  IIHRDVK  NILLDE F A + DFGL+K     + THV+TAV
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTTAV 195

Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ--INLADWAMKW 734
           +G+ G++ PEY    + +EK+DV+ +GV+L E++  +   +     +   + L DW    
Sbjct: 196 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255

Query: 735 QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE--YVLQLH 792
            K++ L++++D  L+GNY  E +E+  ++A  C       RP M EV+  LE   + +  
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERW 315

Query: 793 EAWMRTD 799
           E W + +
Sbjct: 316 EEWQKEE 322

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  265 bits (680), Expect = 4e-82
 Identities = 62/315 (19%), Positives = 126/315 (40%), Gaps = 27/315 (8%)

Query: 500 GKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETE 559
           G       +   +       +   G FG V+K ++ +    A+K    Q +Q   + E E
Sbjct: 11  GVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEY-VAVKIFPIQDKQSW-QNEYE 68

Query: 560 IEMLSKLRHRHLVSLIGFCDE----QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           +  L  ++H +++  IG          ++ L+  +   G+L   L       ++W +   
Sbjct: 69  VYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSWNELCH 125

Query: 616 ACIGAARGLHYLHTGAER-------GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
                ARGL YLH             I HRD+K+ N+LL  N  A ++DFGL+    + +
Sbjct: 126 IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK 185

Query: 669 HTHVSTAVKGSFGYLDPEYF-----WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
               +    G+  Y+ PE       +++    + D+Y+ G+VL+E+       +  + + 
Sbjct: 186 SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEY 245

Query: 724 QINLADWAMKWQKQRSLKSII-----DPHLKGNYSP-ESLEKFGEIAEKCLDDEGKNRPT 777
            +   +   +      ++ ++      P L+  +     +    E  E+C D + + R +
Sbjct: 246 MLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLS 305

Query: 778 MGEVLWHLEYVLQLH 792
            G V   +  + +L 
Sbjct: 306 AGCVGERITQMQRLT 320

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  216 bits (553), Expect = 4e-64
 Identities = 77/273 (28%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           +G G FG V K +       AIK+   +SE     F  E+  LS++ H ++V L G C  
Sbjct: 16  VGRGAFGVVCKAKWRA-KDVAIKQIESESE--RKAFIVELRQLSRVNHPNIVKLYGAC-- 70

Query: 581 QNEMILVYEYMANGTLRSHLFGSD-LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
            N + LV EY   G+L + L G++ LP  T    +  C+  ++G+ YLH+   + +IHRD
Sbjct: 71  LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 130

Query: 640 VKTTNILLDENF-VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSD 698
           +K  N+LL     V K+ DFG +      +     T  KGS  ++ PE F     +EK D
Sbjct: 131 LKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 185

Query: 699 VYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESL- 757
           V+S+G++L+EV+  R       P D+I    + + W      +  +          ++L 
Sbjct: 186 VFSWGIILWEVITRR------KPFDEIGGPAFRIMWAVHNGTRPPL---------IKNLP 230

Query: 758 EKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
           +    +  +C   +   RP+M E++  + ++++
Sbjct: 231 KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  215 bits (550), Expect = 1e-63
 Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 30/277 (10%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           IG G FG V + E    +  A+K    Q    + + EF  E+ ++ +LRH ++V  +G  
Sbjct: 45  IGAGSFGTVHRAEWHG-SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDL-PPLTWKQRLDACIGAARGLHYLHTGAERGIIH 637
            +   + +V EY++ G+L   L  S     L  ++RL      A+G++YLH      I+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVH 162

Query: 638 RDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS-TAVKGSFGYLDPEYFWRQQLTEK 696
           R++K+ N+L+D+ +  K+ DFGLS+       T +S  +  G+  ++ PE    +   EK
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRL---KASTFLSSKSAAGTPEWMAPEVLRDEPSNEK 219

Query: 697 SDVYSFGVVLFEVVCARAVINPTLPKDQINLAD--WAMKWQKQRSLKSIIDPHLKGNYSP 754
           SDVYSFGV+L+E+   +       P   +N A    A+ ++ +R         +     P
Sbjct: 220 SDVYSFGVILWELATLQ------QPWGNLNPAQVVAAVGFKCKR-------LEI-----P 261

Query: 755 ESL-EKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
            +L  +   I E C  +E   RP+   ++  L  +++
Sbjct: 262 RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  208 bits (532), Expect = 6e-61
 Identities = 69/324 (21%), Positives = 125/324 (38%), Gaps = 38/324 (11%)

Query: 503 FTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEM 562
              +E  +  +N     +IG G +G V+KG +++    A+K  +  + Q     E  I  
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDE-RPVAVKVFSFANRQNFIN-EKNIYR 60

Query: 563 LSKLRHRHLVSLIGFC-----DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
           +  + H ++   I        D + E +LV EY  NG+L  +L         W       
Sbjct: 61  VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLA 117

Query: 618 IGAARGLHYLHTGAERG------IIHRDVKTTNILLDENFVAKMSDFGLSKT------GP 665
               RGL YLHT   RG      I HRD+ + N+L+  +    +SDFGLS          
Sbjct: 118 HSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVR 177

Query: 666 SMEHTHVSTAVKGSFGYLDPEYF-------WRQQLTEKSDVYSFGVVLFEVV--CARAVI 716
             E  + + +  G+  Y+ PE           +   ++ D+Y+ G++ +E+   C     
Sbjct: 178 PGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237

Query: 717 NPTLPKDQINLADWAMKWQKQRSLKSIID-----PHLKGNYSPES--LEKFGEIAEKCLD 769
             ++P+ Q+              ++ ++      P     +   S  +    E  E C D
Sbjct: 238 GESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWD 297

Query: 770 DEGKNRPTMGEVLWHLEYVLQLHE 793
            + + R T       +  ++ + E
Sbjct: 298 QDAEARLTAQXAEERMAELMMIWE 321

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  202 bits (516), Expect = 4e-59
 Identities = 78/275 (28%), Positives = 125/275 (45%), Gaps = 31/275 (11%)

Query: 521 IGVGGFGKVFKG----EIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSL 574
           IG G FG V+KG    ++      A+K  N    + Q L  F+ E+ +L K RH +++  
Sbjct: 32  IGSGSFGTVYKGKWHGDV------AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
           +G+       I V ++    +L  HL  S+      K+ +D     ARG+ YLH    + 
Sbjct: 86  MGYSTAPQLAI-VTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHA---KS 140

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL- 693
           IIHRD+K+ NI L E+   K+ DFGL+        +H    + GS  ++ PE    Q   
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200

Query: 694 --TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN 751
             + +SDVY+FG+VL+E++  +      LP   IN  D  +     R   S     ++ N
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQ------LPYSNINNRDQII-EMVGRGSLSPDLSKVRSN 253

Query: 752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
                      +  +CL  +   RP+   +L  +E
Sbjct: 254 CPKR----MKRLMAECLKKKRDERPSFPRILAEIE 284

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  201 bits (514), Expect = 4e-59
 Identities = 71/282 (25%), Positives = 133/282 (47%), Gaps = 41/282 (14%)

Query: 520 MIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQ----GLAEFETEIEMLSKLRHRHLVSLI 575
           +IG+GGFGKV++         A+K A    ++     +     E ++ + L+H ++++L 
Sbjct: 14  IIGIGGFGKVYRAFWIG-DEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGI 635
           G C ++  + LV E+   G L   L G  +P       ++  +  ARG++YLH  A   I
Sbjct: 73  GVCLKEPNLCLVMEFARGGPLNRVLSGKRIP---PDILVNWAVQIARGMNYLHDEAIVPI 129

Query: 636 IHRDVKTTNILLDE--------NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY 687
           IHRD+K++NIL+ +        N + K++DFGL++      H     +  G++ ++ PE 
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAAGAYAWMAPEV 185

Query: 688 FWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD--WAMKWQKQRSLKSIID 745
                 ++ SDV+S+GV+L+E++         +P   I+     + +   K         
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGE------VPFRGIDGLAVAYGVAMNKLA------- 232

Query: 746 PHLKGNYSPESL-EKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
             +     P +  E F ++ E C + +  +RP+   +L  L 
Sbjct: 233 LPI-----PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLT 269

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  199 bits (509), Expect = 2e-58
 Identities = 51/275 (18%), Positives = 111/275 (40%), Gaps = 35/275 (12%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           +     G+++KG  +      +K    +  S +   +F  E   L    H +++ ++G C
Sbjct: 18  LNENHSGELWKGRWQG-NDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76

Query: 579 DE--QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGII 636
                    L+  +M  G+L + L       +   Q +   +  ARG+ +LHT  E  I 
Sbjct: 77  QSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIP 135

Query: 637 HRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL--- 693
              + + ++++DE+  A++S   +         +  S     +  ++ PE   ++     
Sbjct: 136 RHALNSRSVMIDEDMTARISMADVKF-------SFQSPGRMYAPAWVAPEALQKKPEDTN 188

Query: 694 TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMK--WQKQRSLKSIIDPHLKGN 751
              +D++SF V+L+E+V         +P   ++  +  MK   +  R       P +   
Sbjct: 189 RRSADMWSFAVLLWELVTRE------VPFADLSNMEIGMKVALEGLR-------PTIPPG 235

Query: 752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
            SP       ++ + C++++   RP    ++  LE
Sbjct: 236 ISPH----VSKLMKICMNEDPAKRPKFDMIVPILE 266

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  197 bits (504), Expect = 2e-57
 Identities = 73/283 (25%), Positives = 123/283 (43%), Gaps = 39/283 (13%)

Query: 520 MIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQG-------LAEFETEIEMLSKLRHRHL 571
            IG GGFG V KG  ++D ++ AIK       +G         EF+ E+ ++S L H ++
Sbjct: 26  QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85

Query: 572 VSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
           V L G     N   +V E++  G L   L      P+ W  +L   +  A G+ Y+    
Sbjct: 86  VKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQN-Q 141

Query: 632 ERGIIHRDVKTTNILLDE-----NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPE 686
              I+HRD+++ NI L          AK++DFGLS+     +  H  + + G+F ++ PE
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAPE 196

Query: 687 YFWRQQL--TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII 744
               ++   TEK+D YSF ++L+ ++             +I      ++ +  R      
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILT-GEGPFDEYSYGKIKFI-NMIREEGLR------ 248

Query: 745 DPHLKGNYSPESL-EKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
            P +     PE    +   + E C   + K RP    ++  L 
Sbjct: 249 -PTI-----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  197 bits (504), Expect = 4e-57
 Identities = 62/291 (21%), Positives = 113/291 (38%), Gaps = 44/291 (15%)

Query: 520 MIGVGGFGKVFKG----EIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVS 573
           +IG G FG+V+ G    E+      AI+  + +  +E  L  F+ E+    + RH ++V 
Sbjct: 40  LIGKGRFGQVYHGRWHGEV------AIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVL 93

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
            +G C     + ++       TL S +  +    L   +         +G+ YLH    +
Sbjct: 94  FMGACMSPPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHA---K 149

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSK---TGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
           GI+H+D+K+ N+  D   V  ++DFGL        +           G   +L PE   +
Sbjct: 150 GILHKDLKSKNVFYDNGKV-VITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQ 208

Query: 691 QQL---------TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK 741
                       ++ SDV++ G + +E+           P         A+ WQ    +K
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELHARE------WPFKTQPAE--AIIWQMGTGMK 260

Query: 742 SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH 792
             +          E      +I   C   E + RPT  +++  LE + + +
Sbjct: 261 PNLSQI---GMGKE----ISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  196 bits (499), Expect = 1e-56
 Identities = 66/283 (23%), Positives = 112/283 (39%), Gaps = 39/283 (13%)

Query: 521 IGVGGFGKVFKGEIEDCTLA-AIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           +G G FG+  K    +      +K      E+    F  E++++  L H +++  IG   
Sbjct: 18  LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
           +   +  + EY+  GTLR  +   D     W QR+      A G+ YLH      IIHRD
Sbjct: 78  KDKRLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLH---SMNIIHRD 133

Query: 640 VKTTNILLDENFVAKMSDFGLSK------------TGPSMEHTHVSTAVKGSFGYLDPEY 687
           + + N L+ EN    ++DFGL++                         V G+  ++ PE 
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193

Query: 688 FWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH 747
              +   EK DV+SFG+VL E++  R   +P      ++                    +
Sbjct: 194 INGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLPRTMDFGL-----------------N 235

Query: 748 LKGNYSPES----LEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
           ++G             F  I  +C D + + RP+  ++   LE
Sbjct: 236 VRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  185 bits (471), Expect = 2e-52
 Identities = 69/293 (23%), Positives = 117/293 (39%), Gaps = 35/293 (11%)

Query: 520 MIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC- 578
            IG G +G+V+ G+     +A +K      E      ETEI     +RH +++  I    
Sbjct: 44  QIGKGRYGEVWMGKWRGEKVA-VKVFFTTEEA-SWFRETEIYQTVLMRHENILGFIAADI 101

Query: 579 ---DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHT-----G 630
                  ++ L+ +Y  NG+L  +L       L  K  L     +  GL +LHT      
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLS--KTGPSMEHTHVSTAVKGSFGYLDPE-- 686
            +  I HRD+K+ NIL+ +N    ++D GL+      + E         G+  Y+ PE  
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL 218

Query: 687 ----YFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS 742
                    Q    +D+YSFG++L+EV   R V    + + Q+    +        S + 
Sbjct: 219 DESLNRNHFQSYIMADMYSFGLILWEVAR-RCVSGGIVEEYQL---PYHDLVPSDPSYED 274

Query: 743 IID--------PHLKGNYSPES-LEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
           + +        P     +S +  L + G++  +C      +R T   V   L 
Sbjct: 275 MREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  181 bits (461), Expect = 2e-51
 Identities = 63/297 (21%), Positives = 119/297 (40%), Gaps = 43/297 (14%)

Query: 520 MIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC- 578
            +G G +G+V++G  +     A+K  + + E+     ETE+     LRH +++  I    
Sbjct: 15  CVGKGRYGEVWRGSWQG-ENVAVKIFSSRDEKS-WFRETELYNTVMLRHENILGFIASDM 72

Query: 579 ---DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER-- 633
                  ++ L+  Y   G+L  +L    L  L     L   +  A GL +LH       
Sbjct: 73  TSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129

Query: 634 ---GIIHRDVKTTNILLDENFVAKMSDFGLS--KTGPSMEHTHVSTAVKGSFGYLDPE-- 686
               I HRD+K+ NIL+ +N    ++D GL+   +  + +    +    G+  Y+ PE  
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189

Query: 687 ----YFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI--------NLADWAMK- 733
                       ++ D+++FG+VL+EV   R V N  +   +         + +   M+ 
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEVAR-RMVSNGIVEDYKPPFYDVVPNDPSFEDMRK 248

Query: 734 ---WQKQRSLKSIIDPHLKGNYSPES-LEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
                +QR       P++   +  +  L    ++ ++C       R T   +   L 
Sbjct: 249 VVCVDQQR-------PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  179 bits (455), Expect = 4e-50
 Identities = 64/293 (21%), Positives = 117/293 (39%), Gaps = 35/293 (11%)

Query: 520 MIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC- 578
            IG G FG+V++G+     +A +K  + + E+     E EI     LRH +++  I    
Sbjct: 49  SIGKGRFGEVWRGKWRGEEVA-VKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADN 106

Query: 579 ---DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLH-----TG 630
                  ++ LV +Y  +G+L  +L   +   +T +  +   +  A GL +LH     T 
Sbjct: 107 KDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLS--KTGPSMEHTHVSTAVKGSFGYLDPE-- 686
            +  I HRD+K+ NIL+ +N    ++D GL+      +           G+  Y+ PE  
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 223

Query: 687 ----YFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS 742
                    +  +++D+Y+ G+V +E+   R  I       Q+   D         S++ 
Sbjct: 224 DDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHEDYQLPYYDLV---PSDPSVEE 279

Query: 743 IIDPHLKGNYSPE---------SLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
           +     +    P          +L    +I  +C    G  R T   +   L 
Sbjct: 280 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  150 bits (382), Expect = 6e-40
 Identities = 67/281 (23%), Positives = 114/281 (40%), Gaps = 35/281 (12%)

Query: 521 IGVGGFGKVFKGEIEDCTLA-AIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           IG G FG+VF G +       A+K           A+F  E  +L +  H ++V LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
            ++  + +V E +  G   + L  ++   L  K  L     AA G+ YL     +  IHR
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHR 237

Query: 639 DVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSD 698
           D+   N L+ E  V K+SDFG+S+      +       +    +  PE     + + +SD
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESD 297

Query: 699 VYSFGVVLFEVVCARAVINPTLPKDQINLAD---WAMKWQKQRSLKSIIDPHLKGNY--- 752
           V+SFG++L+E                 +L       +      S +   +  ++      
Sbjct: 298 VWSFGILLWETF---------------SLGASPYPNL------SNQQTRE-FVEKGGRLP 335

Query: 753 SPESL-EKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH 792
            PE   +    + E+C   E   RP+   +   L+ + + H
Sbjct: 336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  145 bits (368), Expect = 1e-38
 Identities = 69/319 (21%), Positives = 119/319 (37%), Gaps = 36/319 (11%)

Query: 486 GTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKR 544
           G+ +     +  R    F    + +   ++     +G GGF  V   E + D    A+KR
Sbjct: 2   GSSHHHHHHSSGRENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKR 61

Query: 545 ANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ----NEMILVYEYMANGTLRSHL 600
                +Q   E + E +M     H +++ L+ +C  +    +E  L+  +   GTL + +
Sbjct: 62  ILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEI 121

Query: 601 --FGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF 658
                    LT  Q L   +G  RGL  +H    +G  HRD+K TNILL +     + D 
Sbjct: 122 ERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDL 178

Query: 659 GLSKTGPSMEHTHVSTAVK--------GSFGYLDPEYF---WRQQLTEKSDVYSFGVVLF 707
           G       +       A+          +  Y  PE F       + E++DV+S G VL+
Sbjct: 179 GSMNQ-ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLY 237

Query: 708 EVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKC 767
            ++          P D +     ++    Q  L     P     +S        ++    
Sbjct: 238 AMMFG------EGPYDMVFQKGDSVALAVQNQLSIPQSPR----HSSA----LWQLLNSM 283

Query: 768 LDDEGKNRPTMGEVLWHLE 786
           +  +   RP +  +L  LE
Sbjct: 284 MTVDPHQRPHIPLLLSQLE 302

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  145 bits (368), Expect = 1e-38
 Identities = 71/214 (33%), Positives = 103/214 (48%), Gaps = 35/214 (16%)

Query: 521 IGVGGFGKVFKGEI---EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLI 575
           IG G FG+V K  I        AAIKR     S+    +F  E+E+L KL  H ++++L+
Sbjct: 33  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92

Query: 576 GFCDEQNEMILVYEYMANGTLRSHL--------------FGSDLPPLTWKQRLDACIGAA 621
           G C+ +  + L  EY  +G L   L                S    L+ +Q L      A
Sbjct: 93  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG 681
           RG+ YL   +++  IHRD+   NIL+ EN+VAK++DFGLS+             VK + G
Sbjct: 153 RGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQ--------EVYVKKTMG 201

Query: 682 YL-----DPEYFWRQQLTEKSDVYSFGVVLFEVV 710
            L       E       T  SDV+S+GV+L+E+V
Sbjct: 202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  148 bits (376), Expect = 1e-38
 Identities = 65/190 (34%), Positives = 93/190 (48%), Gaps = 6/190 (3%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           +G G FG+V+ G     T  AIK   P +      F  E +++ KLRH  LV L     E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE 250

Query: 581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDV 640
           +   I V EYM+ G+L   L G     L   Q +D     A G+ Y+        +HRD+
Sbjct: 251 EPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDL 306

Query: 641 KTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           +  NIL+ EN V K++DFGL++     E+T      K    +  PE     + T KSDV+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVW 365

Query: 701 SFGVVLFEVV 710
           SFG++L E+ 
Sbjct: 366 SFGILLTELT 375

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  143 bits (364), Expect = 1e-38
 Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 26/200 (13%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           +G G FG+V+ G     T  A+K  +    S      F  E  ++ +L+H+ LV L    
Sbjct: 21  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRLYAVV 77

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
            ++   I + EYM NG+L   L       LT  + LD     A G+ ++    ER  IHR
Sbjct: 78  TQEPIYI-ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHR 133

Query: 639 DVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS--------TAVKGSFGYLDPEYFWR 690
           D++  NIL+ +    K++DFGL++     E+T           TA         PE    
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA---------PEAINY 184

Query: 691 QQLTEKSDVYSFGVVLFEVV 710
              T KSDV+SFG++L E+V
Sbjct: 185 GTFTIKSDVWSFGILLTEIV 204

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  145 bits (368), Expect = 2e-38
 Identities = 69/214 (32%), Positives = 100/214 (46%), Gaps = 32/214 (14%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSL 574
           +G G FGKVF  E       +D  L A+K     SE    +F+ E E+L+ L+H+H+V  
Sbjct: 49  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHL-------------FGSDLPPLTWKQRLDACIGAA 621
            G C E   +++V+EYM +G L   L                   PL   Q L      A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG 681
            G+ YL   A    +HRD+ T N L+ +  V K+ DFG+S+   S ++        G   
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR-----VGGRT 220

Query: 682 YL-----DPEYFWRQQLTEKSDVYSFGVVLFEVV 710
            L      PE    ++ T +SDV+SFGVVL+E+ 
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  144 bits (365), Expect = 2e-38
 Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 18/202 (8%)

Query: 520 MIGVGGFGKVFKGEIEDC----TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSL 574
           +IG G FG V+ G + D        A+K  N       +++F TE  ++    H +++SL
Sbjct: 32  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91

Query: 575 IGFC-DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           +G C   +   ++V  YM +G LR+ +        T K  +   +  A+G+ YL   A +
Sbjct: 92  LGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYL---ASK 147

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL-----DPEYF 688
             +HRD+   N +LDE F  K++DFGL++    M      +    +   L       E  
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLAR---DMYDKEYYSVHNKTGAKLPVKWMALESL 204

Query: 689 WRQQLTEKSDVYSFGVVLFEVV 710
             Q+ T KSDV+SFGV+L+E++
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELM 226

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  149 bits (378), Expect = 3e-38
 Identities = 65/190 (34%), Positives = 93/190 (48%), Gaps = 6/190 (3%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           +G G FG+V+ G     T  AIK   P +      F  E +++ KLRH  LV L     E
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE 333

Query: 581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDV 640
           +   I V EYM+ G+L   L G     L   Q +D     A G+ Y+        +HRD+
Sbjct: 334 EPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDL 389

Query: 641 KTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           +  NIL+ EN V K++DFGL++     E+T      K    +  PE     + T KSDV+
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVW 448

Query: 701 SFGVVLFEVV 710
           SFG++L E+ 
Sbjct: 449 SFGILLTELT 458

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  147 bits (373), Expect = 4e-38
 Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 22/198 (11%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           +G G FG+V+       T  A+K   P S   +  F  E  ++  L+H  LV L     +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVVTK 254

Query: 581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDV 640
           +   I + E+MA G+L   L   +       + +D     A G+ ++    +R  IHRD+
Sbjct: 255 EPIYI-ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI---EQRNYIHRDL 310

Query: 641 KTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS--------TAVKGSFGYLDPEYFWRQQ 692
           +  NIL+  + V K++DFGL++     E+T           TA         PE      
Sbjct: 311 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTA---------PEAINFGS 361

Query: 693 LTEKSDVYSFGVVLFEVV 710
            T KSDV+SFG++L E+V
Sbjct: 362 FTIKSDVWSFGILLMEIV 379

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  142 bits (361), Expect = 6e-38
 Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 34/289 (11%)

Query: 521 IGVGGFGKVFKGEIE-----DCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSL 574
           +G G FGKV     +          A+K   P      +A+ + EIE+L  L H ++V  
Sbjct: 29  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88

Query: 575 IGFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
            G C E     + L+ E++ +G+L+ +L  +    +  KQ+L   +   +G+ YL     
Sbjct: 89  KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYL---GS 144

Query: 633 RGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA-----VKGSFGYLDPEY 687
           R  +HRD+   N+L++     K+ DFGL+K   + +  +         V     +  PE 
Sbjct: 145 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVF----WYAPEC 200

Query: 688 FWRQQLTEKSDVYSFGVVLFEVV--CARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
             + +    SDV+SFGV L E++  C        L    I      M   +  +      
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT----- 255

Query: 746 PHLKGNY---SPESL-EKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
             LK       P +  ++  ++  KC + +  NR +   ++   E +L+
Sbjct: 256 --LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  143 bits (362), Expect = 6e-38
 Identities = 69/278 (24%), Positives = 106/278 (38%), Gaps = 37/278 (13%)

Query: 514 NFDESLMIGVGGFGKVFKG-EIEDCTLAAIKRAN--PQSEQGLAEFETEIEMLSKL-RHR 569
           +F     +G G +G+VFK    ED  L A+KR+    +  +  A    E+    K+ +H 
Sbjct: 58  SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117

Query: 570 HLVSLIGFCDEQNEMILVYEYMANGTLRSHL--FGSDLP-PLTWKQRLDACIGAARGLHY 626
             V L    +E   + L  E     +L+ H   +G+ LP    W    D        L +
Sbjct: 118 CCVRLEQAWEEGGILYLQTEL-CGPSLQQHCEAWGASLPEAQVWGYLRDTL----LALAH 172

Query: 627 LHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPE 686
           LH    +G++H DVK  NI L      K+ DFGL      +         +G   Y+ PE
Sbjct: 173 LH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLV---ELGTAGAGEVQEGDPRYMAPE 226

Query: 687 YFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP 746
              +      +DV+S G+ + EV C        LP            WQ+ R  +  + P
Sbjct: 227 -LLQGSYGTAADVFSLGLTILEVACNM-----ELPHG-------GEGWQQLR--QGYLPP 271

Query: 747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                 S E       +    L+ + K R T   +L  
Sbjct: 272 EFTAGLSSE----LRSVLVMMLEPDPKLRATAEALLAL 305

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  143 bits (362), Expect = 6e-38
 Identities = 59/294 (20%), Positives = 116/294 (39%), Gaps = 30/294 (10%)

Query: 520 MIGVGGFGKVFKGE-IEDCTLAAIKR---ANPQSEQGLAEFETEIEMLSKLRHRHLVSLI 575
            IG G F +V++   + D    A+K+    +    +  A+   EI++L +L H +++   
Sbjct: 39  KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY 98

Query: 576 GFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
               E NE+ +V E    G L   +  F      +  +      +     L ++H    R
Sbjct: 99  ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SR 155

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH-VSTAVKGSFGYLDPEYFWRQQ 692
            ++HRD+K  N+ +    V K+ D GL +           + ++ G+  Y+ PE      
Sbjct: 156 RVMHRDIKPANVFITATGVVKLGDLGLGRF---FSSKTTAAHSLVGTPYYMSPERIHENG 212

Query: 693 LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY 752
              KSD++S G +L+E+   +         D++NL     K ++         P    +Y
Sbjct: 213 YNFKSDIWSLGCLLYEMAALQ----SPFYGDKMNLYSLCKKIEQCD-----YPPLPSDHY 263

Query: 753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFS 806
           S E      ++   C++ + + RP +  V    + +     A   +    +   
Sbjct: 264 SEE----LRQLVNMCINPDPEKRPDVTYVYDVAKRM----HACTASSLEHHHHH 309

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  144 bits (366), Expect = 7e-38
 Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 18/202 (8%)

Query: 520 MIGVGGFGKVFKGEIEDC----TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSL 574
           +IG G FG V+ G + D        A+K  N       +++F TE  ++    H +++SL
Sbjct: 96  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155

Query: 575 IGFC-DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           +G C   +   ++V  YM +G LR+ +        T K  +   +  A+G+ +L   A +
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFL---ASK 211

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL-----DPEYF 688
             +HRD+   N +LDE F  K++DFGL++    M      +    +   L       E  
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLAR---DMYDKEFDSVHNKTGAKLPVKWMALESL 268

Query: 689 WRQQLTEKSDVYSFGVVLFEVV 710
             Q+ T KSDV+SFGV+L+E++
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELM 290

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  141 bits (357), Expect = 2e-37
 Identities = 66/290 (22%), Positives = 117/290 (40%), Gaps = 48/290 (16%)

Query: 513 NNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHL 571
            +F E  +IG GGFG+VFK +   D     IKR    +E    + E E++ L+KL H ++
Sbjct: 11  MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE----KAEREVKALAKLDHVNI 66

Query: 572 VSLIGFCDEQNEMI----------------LVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
           V   G  D  +                   +  E+   GTL   +       L     L+
Sbjct: 67  VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126

Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
                 +G+ Y+H    + +I+RD+K +NI L +    K+ DFGL  +   +++    T 
Sbjct: 127 LFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTS---LKNDGKRTR 180

Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ 735
            KG+  Y+ PE    Q   ++ D+Y+ G++L E++            +            
Sbjct: 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHV-----CDTAFETSKF-------- 227

Query: 736 KQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL 785
                  + D  +   +  +       + +K L  + ++RP   E+L  L
Sbjct: 228 ----FTDLRDGIISDIFDKK----EKTLLQKLLSKKPEDRPNTSEILRTL 269

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  146 bits (370), Expect = 2e-37
 Identities = 50/191 (26%), Positives = 95/191 (49%), Gaps = 6/191 (3%)

Query: 521 IGVGGFGKVFKGEIEDC-TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           +G G +G+V++G  +      A+K     + + + EF  E  ++ +++H +LV L+G C 
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 286

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
            +    ++ E+M  G L  +L   +   ++    L      +  + YL    ++  IHR+
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRN 343

Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDV 699
           +   N L+ EN + K++DFGLS+      +T      K    +  PE     + + KSDV
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA-HAGAKFPIKWTAPESLAYNKFSIKSDV 402

Query: 700 YSFGVVLFEVV 710
           ++FGV+L+E+ 
Sbjct: 403 WAFGVLLWEIA 413

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  140 bits (356), Expect = 3e-37
 Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 18/202 (8%)

Query: 520 MIGVGGFGKVFKGEIEDC----TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSL 574
           +IG G FG V+ GE  D        AIK  +     Q +  F  E  ++  L H ++++L
Sbjct: 28  VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87

Query: 575 IGFCDEQNEMIL-VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           IG       +   +  YM +G L   +        T K  +   +  ARG+ YL   AE+
Sbjct: 88  IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYL---AEQ 143

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL-----DPEYF 688
             +HRD+   N +LDE+F  K++DFGL++    +      +  +     L       E  
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLAR---DILDREYYSVQQHRHARLPVKWTALESL 200

Query: 689 WRQQLTEKSDVYSFGVVLFEVV 710
              + T KSDV+SFGV+L+E++
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELL 222

>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Length = 174

 Score =  136 bits (344), Expect = 4e-37
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 29/191 (15%)

Query: 214 GRGVETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAGSEIRNSSNITYASTNDSS 273
           G   + ++ +N GG              +  D          S+      I  ++  D  
Sbjct: 1   GLADKVIWAVNAGGESHVDV----HGIHYRKDPLE-GRVGRASDYGMKLPILRSNPEDQV 55

Query: 274 VAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYI 333
           +     Y+T R   +        +  +   +    +Y + L F E+ + ++ Q++F + +
Sbjct: 56  L-----YQTERYNED--------SFGYDIPIKEEGEYVLVLKFAEVYFAQSQQKVFDVRV 102

Query: 334 NNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQLGPDTAVG--------AAGT 385
           N  T   + DIF + G  +  +      ++      L +Q    T  G            
Sbjct: 103 NGHTVVKDLDIFDRVGH-STAHDEIIPISIKKG--KLSVQGEVSTFTGKLSVEFVKGYYD 159

Query: 386 DALLNGLEIFK 396
           +  +  L I K
Sbjct: 160 NPKVCALFIMK 170

>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Length = 174

 Score = 96.9 bits (241), Expect = 2e-23
 Identities = 33/167 (19%), Positives = 58/167 (34%), Gaps = 5/167 (2%)

Query: 25  FLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGIAATTDSLSGDSIYEPLYKTARVFAD 84
           + +N G  S V+V G  +  D          +S        L  +   + LY+T R   D
Sbjct: 8   WAVNAGGESHVDVHGIHYRKD--PLEGRVGRASDYGMKLPILRSNPEDQVLYQTERYNED 65

Query: 85  GLNYTFEIIA-GNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGEISHRNLY 143
              Y   I   G Y++ L F    F      +  F V  NG  ++ +      + H   +
Sbjct: 66  SFGYDIPIKEEGEYVLVLKFAEVYFA--QSQQKVFDVRVNGHTVVKDLDIFDRVGHSTAH 123

Query: 144 LQSSGGNSSSISLVKEYFLGVDLDKLMIEFIPSKGSFGFINAIEIVP 190
            +    +     L  +  +     KL +EF+        + A+ I+ 
Sbjct: 124 DEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYYDNPKVCALFIMK 170

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  140 bits (355), Expect = 4e-37
 Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 33/215 (15%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSL 574
           +G G FGKVF  E       +D  L A+K     +     +F+ E E+L+ L+H H+V  
Sbjct: 23  LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHL--------------FGSDLPPLTWKQRLDACIGA 620
            G C + + +I+V+EYM +G L   L                     L   Q L      
Sbjct: 83  YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSF 680
           A G+ YL   A +  +HRD+ T N L+  N + K+ DFG+S+   S ++        G  
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYR-----VGGH 194

Query: 681 GYL-----DPEYFWRQQLTEKSDVYSFGVVLFEVV 710
             L      PE    ++ T +SDV+SFGV+L+E+ 
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 229

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  139 bits (352), Expect = 5e-37
 Identities = 67/200 (33%), Positives = 96/200 (48%), Gaps = 26/200 (13%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           IG G FG V  G   +    AIK  R    SE+   +F  E E++ KL H  LV L G C
Sbjct: 16  IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 72

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
            EQ  + LV E+M +G L  +L          +  L  C+    G+ YL    E  +IHR
Sbjct: 73  LEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYL---EEACVIHR 128

Query: 639 DVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS--------TAVKGSFGYLDPEYFWR 690
           D+   N L+ EN V K+SDFG+++     ++T  +         +         PE F  
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS---------PEVFSF 179

Query: 691 QQLTEKSDVYSFGVVLFEVV 710
            + + KSDV+SFGV+++EV 
Sbjct: 180 SRYSSKSDVWSFGVLMWEVF 199

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  139 bits (353), Expect = 8e-37
 Identities = 73/307 (23%), Positives = 129/307 (42%), Gaps = 61/307 (19%)

Query: 512 TNNFDESLMIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRH 570
            ++F+E  ++G G FG+V K     D    AIK+    +E+ L+   +E+ +L+ L H++
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQY 63

Query: 571 LVSLIG-FCDEQNEMI------------LVYEYMANGTLRSHLFGSDLPP-----LTW-K 611
           +V     + + +N +             +  EY  NGTL   +   +L           +
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123

Query: 612 QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK--------- 662
           Q L+A       L Y+H    +GIIHRD+K  NI +DE+   K+ DFGL+K         
Sbjct: 124 QILEA-------LSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173

Query: 663 ----TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVIN 717
                       ++++A+ G+  Y+  E         EK D+YS G++ FE++       
Sbjct: 174 KLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP----- 227

Query: 718 PTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
            +   +++N+       +K RS+     P    N          +I    +D +   RP 
Sbjct: 228 FSTGMERVNI------LKKLRSVSIEFPPDFDDNKMKV----EKKIIRLLIDHDPNKRPG 277

Query: 778 MGEVLWH 784
              +L  
Sbjct: 278 ARTLLNS 284

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  138 bits (351), Expect = 1e-36
 Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 26/200 (13%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           +G G FG V  G+       AIK  +    SE    EF  E +++  L H  LV L G C
Sbjct: 32  LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGVC 88

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
            +Q  + ++ EYMANG L ++L          +Q L+ C      + YL     +  +HR
Sbjct: 89  TKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYL---ESKQFLHR 144

Query: 639 DVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS--------TAVKGSFGYLDPEYFWR 690
           D+   N L+++  V K+SDFGLS+     E+T           +          PE    
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP---------PEVLMY 195

Query: 691 QQLTEKSDVYSFGVVLFEVV 710
            + + KSD+++FGV+++E+ 
Sbjct: 196 SKFSSKSDIWAFGVLMWEIY 215

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  140 bits (354), Expect = 1e-36
 Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 28/210 (13%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVS 573
           +G G FG V++G        E  T  AIK  N   S +   EF  E  ++ +    H+V 
Sbjct: 33  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHL--------FGSDLPPLTWKQRLDACIGAARGLH 625
           L+G   +    +++ E M  G L+S+L            L P +  + +      A G+ 
Sbjct: 93  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL-- 683
           YL        +HRD+   N ++ E+F  K+ DFG+++    +  T      KG  G L  
Sbjct: 153 YL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR---DIYET--DYYRKGGKGLLPV 204

Query: 684 ---DPEYFWRQQLTEKSDVYSFGVVLFEVV 710
               PE       T  SDV+SFGVVL+E+ 
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  137 bits (348), Expect = 2e-36
 Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 26/200 (13%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           +G G FG V  G+ +     A+K  +    SE    EF  E + + KL H  LV   G C
Sbjct: 16  LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED---EFFQEAQTMMKLSHPKLVKFYGVC 72

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
            ++  + +V EY++NG L ++L       L   Q L+ C     G+ +L        IHR
Sbjct: 73  SKEYPIYIVTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFL---ESHQFIHR 128

Query: 639 DVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS--------TAVKGSFGYLDPEYFWR 690
           D+   N L+D +   K+SDFG+++     ++            +A         PE F  
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSA---------PEVFHY 179

Query: 691 QQLTEKSDVYSFGVVLFEVV 710
            + + KSDV++FG++++EV 
Sbjct: 180 FKYSSKSDVWAFGILMWEVF 199

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  139 bits (353), Expect = 2e-36
 Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 11/196 (5%)

Query: 521 IGVGGFGKVFKGE-----IEDCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSL 574
           +G G FG V+KG       +     AIK      S +   E   E  +++ + + H+  L
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
           +G C      + + + M  G L  ++       +  +  L+ C+  A+G++YL    +R 
Sbjct: 83  LGICLTSTVQL-ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYL---EDRR 137

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
           ++HRD+   N+L+      K++DFGL+K   + E  + +   K    ++  E    +  T
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197

Query: 695 EKSDVYSFGVVLFEVV 710
            +SDV+S+GV ++E++
Sbjct: 198 HQSDVWSYGVTVWELM 213

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  139 bits (352), Expect = 2e-36
 Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 12/198 (6%)

Query: 521 IGVGGFGKVFKGEIE-----DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLI 575
           +G G FG V     +        + A+K+    +E+ L +FE EIE+L  L+H ++V   
Sbjct: 49  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108

Query: 576 GFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           G C       + L+ EY+  G+LR +L       +   + L       +G+ YL     +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYL---GTK 164

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGP-SMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
             IHRD+ T NIL++     K+ DFGL+K  P   E+  V    +    +  PE     +
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESK 224

Query: 693 LTEKSDVYSFGVVLFEVV 710
            +  SDV+SFGVVL+E+ 
Sbjct: 225 FSVASDVWSFGVVLYELF 242

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  138 bits (351), Expect = 2e-36
 Identities = 64/224 (28%), Positives = 96/224 (42%), Gaps = 42/224 (18%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVS 573
           +G G FGKV K            T  A+K      S   L +  +E  +L ++ H H++ 
Sbjct: 31  LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHL----------------------FGSDLPPLTWK 611
           L G C +   ++L+ EY   G+LR  L                         D   LT  
Sbjct: 91  LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150

Query: 612 QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH 671
             +      ++G+ YL   AE  ++HRD+   NIL+ E    K+SDFGLS+    +    
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR---DVYEED 204

Query: 672 VSTAVKGSFGYL-----DPEYFWRQQLTEKSDVYSFGVVLFEVV 710
               VK S G +       E  +    T +SDV+SFGV+L+E+V
Sbjct: 205 S--YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  137 bits (348), Expect = 3e-36
 Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 12/198 (6%)

Query: 521 IGVGGFGKVFKGEIE-----DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLI 575
           +G G FG V     +        + A+K+    +E+ L +FE EIE+L  L+H ++V   
Sbjct: 18  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77

Query: 576 GFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           G C       + L+ EY+  G+LR +L       +   + L       +G+ YL     +
Sbjct: 78  GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLG---TK 133

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGP-SMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
             IHRD+ T NIL++     K+ DFGL+K  P   E   V    +    +  PE     +
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESK 193

Query: 693 LTEKSDVYSFGVVLFEVV 710
            +  SDV+SFGVVL+E+ 
Sbjct: 194 FSVASDVWSFGVVLYELF 211

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  138 bits (350), Expect = 3e-36
 Identities = 49/211 (23%), Positives = 88/211 (41%), Gaps = 29/211 (13%)

Query: 521 IGVGGFGKVFKGEI----EDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSL 574
           +G G FG V + ++          A+K  +A+  +   + EF  E   + +  H H+  L
Sbjct: 31  LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90

Query: 575 IGFC------DEQNEMILVYEYMANGTLRSHL----FGSDLPPLTWKQRLDACIGAARGL 624
           +G              +++  +M +G L + L     G +   L  +  +   +  A G+
Sbjct: 91  VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150

Query: 625 HYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL- 683
            YL   + R  IHRD+   N +L E+    ++DFGLS+    +         +G    L 
Sbjct: 151 EYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSR---KIYSG--DYYRQGCASKLP 202

Query: 684 ----DPEYFWRQQLTEKSDVYSFGVVLFEVV 710
                 E       T  SDV++FGV ++E++
Sbjct: 203 VKWLALESLADNLYTVHSDVWAFGVTMWEIM 233

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  138 bits (351), Expect = 3e-36
 Identities = 69/304 (22%), Positives = 119/304 (39%), Gaps = 65/304 (21%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLV 572
           +G G FGKV +         +     A+K               +E++++S L +H ++V
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113

Query: 573 SLIGFCDEQNEMILVYEYMANGTLRSHL------------FGSDLPPLTWKQRLDACIGA 620
           +L+G C     ++++ EY   G L + L            F       + +  L      
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSF 680
           A+G+ +L   A +  IHRDV   N+LL    VAK+ DFGL++    + +   S  +    
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR---DIMND--SNYIVKGN 225

Query: 681 GYL-----DPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL-----PKDQINLADW 730
             L      PE  +    T +SDV+S+G++L+E+         +L     P   +N    
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF--------SLGLNPYPGILVN---- 273

Query: 731 AMKWQKQRSLKSIIDPHLKGNY---SPESL-EKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
                  +  K      +K  Y    P    +    I + C   E  +RPT  ++   L+
Sbjct: 274 ------SKFYK-----LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322

Query: 787 YVLQ 790
              Q
Sbjct: 323 EQAQ 326

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  139 bits (352), Expect = 3e-36
 Identities = 59/275 (21%), Positives = 113/275 (41%), Gaps = 24/275 (8%)

Query: 513 NNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRAN--PQSEQGLAEFETEIEMLSKLRHR 569
             +     IG G FGK    +  ED     IK  N    S +   E   E+ +L+ ++H 
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83

Query: 570 HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHT 629
           ++V      +E   + +V +Y   G L   +           Q LD  +     L ++H 
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH- 142

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW 689
             +R I+HRD+K+ NI L ++   ++ DFG+++         ++ A  G+  YL PE   
Sbjct: 143 --DRKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSPEICE 198

Query: 690 RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK 749
            +    KSD+++ G VL+E+   +         +  ++ +  +K            P + 
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLK------HAFEAGSMKNLVLKIISGSF------PPVS 246

Query: 750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
            +YS +       +  +      ++RP++  +L  
Sbjct: 247 LHYSYD----LRSLVSQLFKRNPRDRPSVNSILEK 277

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  139 bits (353), Expect = 3e-36
 Identities = 71/303 (23%), Positives = 133/303 (43%), Gaps = 60/303 (19%)

Query: 521 IGVGGFGKVFKGEI--------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRH 570
           +G G FG+V   E         ++    A+K      +E+ L++  +E+EM+  + +H++
Sbjct: 89  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHL--------------FGSDLPPLTWKQRLDA 616
           +++L+G C +   + ++ EY + G LR +L                     +T+K  +  
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208

Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
               ARG+ YL   A +  IHRD+   N+L+ EN V K++DFGL++    + +       
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR---DINNI--DYYK 260

Query: 677 KGSFGYL-----DPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA 731
           K + G L      PE  + +  T +SDV+SFGV+++E+        P +P +++      
Sbjct: 261 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL------ 314

Query: 732 MKWQKQRSLKSIIDPHLKGNY---SPES-LEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY 787
            K              LK  +    P +   +   +   C       RPT  +++  L+ 
Sbjct: 315 FK-------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361

Query: 788 VLQ 790
           +L 
Sbjct: 362 ILT 364

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  136 bits (346), Expect = 4e-36
 Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 26/198 (13%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           IG G FG V  G+       A+K     +      F  E  ++++LRH +LV L+G   E
Sbjct: 29  IGKGEFGDVMLGDYRGNK-VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85

Query: 581 QNEMI-LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
           +   + +V EYMA G+L  +L       L     L   +     + YL        +HRD
Sbjct: 86  EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRD 142

Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS-------TAVKGSFGYLDPEYFWRQQ 692
           +   N+L+ E+ VAK+SDFGL+K       T  +       TA         PE    ++
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTA---------PEALREKK 190

Query: 693 LTEKSDVYSFGVVLFEVV 710
            + KSDV+SFG++L+E+ 
Sbjct: 191 FSTKSDVWSFGILLWEIY 208

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  137 bits (347), Expect = 4e-36
 Identities = 55/210 (26%), Positives = 83/210 (39%), Gaps = 33/210 (15%)

Query: 521 IGVGGFGKVFKGE--------IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLV 572
           +G G F K+FKG             T   +K  +         F     M+SKL H+HLV
Sbjct: 16  LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75

Query: 573 SLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
              G C   +E ILV E++  G+L ++L  +    +    +L+     A  +H+L    E
Sbjct: 76  LNYGVCVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFL---EE 131

Query: 633 RGIIHRDVKTTNILLD--------ENFVAKMSDFGLSKTGPSMEHTHVS---TAVKGSFG 681
             +IH +V   NILL              K+SD G+S T    +                
Sbjct: 132 NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVP------ 185

Query: 682 YLDPEYFW-RQQLTEKSDVYSFGVVLFEVV 710
              PE     + L   +D +SFG  L+E+ 
Sbjct: 186 ---PECIENPKNLNLATDKWSFGTTLWEIC 212

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  138 bits (350), Expect = 4e-36
 Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 37/219 (16%)

Query: 521 IGVGGFGKVFKGEI--------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRH 570
           +G G FG+V   E         ++    A+K      +E+ L++  +E+EM+  + +H++
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHL--------------FGSDLPPLTWKQRLDA 616
           +++L+G C +   + ++ EY + G LR +L                     +T+K  +  
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162

Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
               ARG+ YL   A +  IHRD+   N+L+ EN V K++DFGL++    + +       
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR---DINNIDYYK-- 214

Query: 677 KGSFGYL-----DPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           K + G L      PE  + +  T +SDV+SFGV+++E+ 
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  137 bits (348), Expect = 5e-36
 Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 28/210 (13%)

Query: 521 IGVGGFGKVFKGEIED----CTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSL 574
           +G G FG V +G ++         A+K  + +  S++ + EF +E   +    H +++ L
Sbjct: 42  LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101

Query: 575 IGFC-----DEQNEMILVYEYMANGTLRSHL----FGSDLPPLTWKQRLDACIGAARGLH 625
           +G C         + +++  +M  G L ++L      +    +  +  L   +  A G+ 
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL-- 683
           YL   + R  +HRD+   N +L ++    ++DFGLSK    +         +G    +  
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSK---KIYSGDYYR--QGRIAKMPV 213

Query: 684 ---DPEYFWRQQLTEKSDVYSFGVVLFEVV 710
                E    +  T KSDV++FGV ++E+ 
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIA 243

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  137 bits (347), Expect = 7e-36
 Identities = 75/292 (25%), Positives = 123/292 (42%), Gaps = 34/292 (11%)

Query: 521 IGVGGFGKVFKGEIEDC-----TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSL 574
           +G G FGKV     +        + A+K        Q  + ++ EI++L  L H H++  
Sbjct: 39  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98

Query: 575 IGFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
            G C++     + LV EY+  G+LR +L    +      Q L        G+ YLH    
Sbjct: 99  KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSI---GLAQLLLFAQQICEGMAYLH---A 152

Query: 633 RGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP-SMEHTHVSTAVKGSFGYLDPEYFWRQ 691
           +  IHRD+   N+LLD + + K+ DFGL+K  P   E+  V         +  PE     
Sbjct: 153 QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 212

Query: 692 QLTEKSDVYSFGVVLFEVV--CARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK 749
           +    SDV+SFGV L+E++  C  +   PT   + I +A   M   +   L       L+
Sbjct: 213 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL-------LE 265

Query: 750 GNY-------SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEA 794
                      P  +     + + C + E   RPT   ++  L+ V + ++ 
Sbjct: 266 RGERLPRPDKCPAEVY---HLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  139 bits (352), Expect = 7e-36
 Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 50/287 (17%)

Query: 520 MIGVGGFGKVFKGEIEDCTLAAIKRAN--PQSEQGLAEFETEIEMLSKLRH--RHLVSLI 575
            IG GG  KVF+   E   + AIK  N      Q L  +  EI  L+KL+     ++ L 
Sbjct: 63  QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122

Query: 576 GFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLT----WKQRLDACIGAARGLHYLHT 629
            +      + +V E   N  L S L    S + P      WK  L+A       +H +H 
Sbjct: 123 DYEITDQYIYMVMEC-GNIDLNSWLKKKKS-IDPWERKSYWKNMLEA-------VHTIH- 172

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPE--- 686
             + GI+H D+K  N L+ +  + K+ DFG++        + V  +  G+  Y+ PE   
Sbjct: 173 --QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK 229

Query: 687 --------YFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR 738
                      + +++ KSDV+S G +L+ +   +       P        +     +  
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK------TP--------FQQIINQIS 275

Query: 739 SLKSIIDPHLKGNYSPESLEK-FGEIAEKCLDDEGKNRPTMGEVLWH 784
            L +IIDP+ +  + P+  EK   ++ + CL  + K R ++ E+L H
Sbjct: 276 KLHAIIDPNHEIEF-PDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  137 bits (348), Expect = 7e-36
 Identities = 54/198 (27%), Positives = 84/198 (42%), Gaps = 12/198 (6%)

Query: 521 IGVGGFGKVFKGEI-----EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLI 575
           +G G FG V              L A+K+          +F+ EI++L  L    +V   
Sbjct: 31  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90

Query: 576 GFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           G         + LV EY+ +G LR  L       L   + L       +G+ YL     R
Sbjct: 91  GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLG---SR 146

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
             +HRD+   NIL++     K++DFGL+K      ++  V    +    +  PE      
Sbjct: 147 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI 206

Query: 693 LTEKSDVYSFGVVLFEVV 710
            + +SDV+SFGVVL+E+ 
Sbjct: 207 FSRQSDVWSFGVVLYELF 224

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  136 bits (344), Expect = 8e-36
 Identities = 58/197 (29%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 521 IGVGGFGKVFKG----EIEDCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSLI 575
           IG G FG V +G            AIK      S+    +F  E   + +  H H+V LI
Sbjct: 23  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGI 635
           G   E    I + E    G LRS L       L     +      +  L YL     +  
Sbjct: 83  GVITENPVWI-IMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYL---ESKRF 137

Query: 636 IHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSF--GYLDPEYFWRQQL 693
           +HRD+   N+L+  N   K+ DFGLS+    ME +    A KG     ++ PE    ++ 
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSR---YMEDSTYYKASKGKLPIKWMAPESINFRRF 194

Query: 694 TEKSDVYSFGVVLFEVV 710
           T  SDV+ FGV ++E++
Sbjct: 195 TSASDVWMFGVCMWEIL 211

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  136 bits (346), Expect = 8e-36
 Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 37/219 (16%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLV 572
           +G G FGKV +         +     A+K   P           +E+++LS L  H ++V
Sbjct: 31  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90

Query: 573 SLIGFCDEQNEMILVYEYMANGTLRSHL----------------FGSDLPPLTWKQRLDA 616
           +L+G C      +++ EY   G L + L                   D   L  +  L  
Sbjct: 91  NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150

Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
               A+G+ +L   A +  IHRD+   NILL    + K+ DFGL++    +++       
Sbjct: 151 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR---DIKNDSNYV-- 202

Query: 677 KGSFGYL-----DPEYFWRQQLTEKSDVYSFGVVLFEVV 710
                 L      PE  +    T +SDV+S+G+ L+E+ 
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  137 bits (347), Expect = 9e-36
 Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 10/196 (5%)

Query: 521 IGVGGFGKVFKG----EIEDCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSLI 575
           IG G  G+V  G      +     AIK      +E+   +F +E  ++ +  H +++ L 
Sbjct: 57  IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGI 635
           G        ++V EYM NG+L + L   D    T  Q +    G   G+ YL   ++ G 
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYL---SDLGY 172

Query: 636 IHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
           +HRD+   N+L+D N V K+SDFGLS+      +  + +T  K    +  PE    +  +
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFS 232

Query: 695 EKSDVYSFGVVLFEVV 710
             SDV+SFGVV++EV+
Sbjct: 233 SASDVWSFGVVMWEVL 248

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  136 bits (344), Expect = 1e-35
 Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 34/216 (15%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVS 573
           +G   FGKV+KG +      E     AIK    +       EF  E  + ++L+H ++V 
Sbjct: 17  LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHL--------------FGSDLPPLTWKQRLDACIG 619
           L+G   +   + +++ Y ++G L   L                +    L     +     
Sbjct: 77  LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136

Query: 620 AARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGS 679
            A G+ YL   +   ++H+D+ T N+L+ +    K+SD GL +    +            
Sbjct: 137 IAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR---EVYAA--DYYKLLG 188

Query: 680 FGYL-----DPEYFWRQQLTEKSDVYSFGVVLFEVV 710
              L      PE     + +  SD++S+GVVL+EV 
Sbjct: 189 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  136 bits (344), Expect = 1e-35
 Identities = 53/196 (27%), Positives = 100/196 (51%), Gaps = 16/196 (8%)

Query: 521 IGVGGFGKVFKGEIEDCTLA-AIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           +G G +G+V++G  +  +L  A+K  + +    +   EF  E  ++ +++H +LV L+G 
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAVMKEIKHPNLVQLLGV 77

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIH 637
           C  +    ++ E+M  G L  +L   +   ++    L      +  + YL    ++  IH
Sbjct: 78  CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIH 134

Query: 638 RDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA---VKGSFGYLDPEYFWRQQLT 694
           RD+   N L+ EN + K++DFGLS+      +T  + A   +K    +  PE     + +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK----WTAPESLAYNKFS 190

Query: 695 EKSDVYSFGVVLFEVV 710
            KSDV++FGV+L+E+ 
Sbjct: 191 IKSDVWAFGVLLWEIA 206

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  136 bits (345), Expect = 1e-35
 Identities = 74/287 (25%), Positives = 123/287 (42%), Gaps = 50/287 (17%)

Query: 520 MIGVGGFGKVFKGEIEDCTLAAIKRAN--PQSEQGLAEFETEIEMLSKLRH--RHLVSLI 575
            IG GG  KVF+   E   + AIK  N      Q L  +  EI  L+KL+     ++ L 
Sbjct: 35  QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94

Query: 576 GFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLT----WKQRLDACIGAARGLHYLHT 629
            +      + +V E   N  L S L    S + P      WK  L+A       +H +H 
Sbjct: 95  DYEITDQYIYMVMEC-GNIDLNSWLKKKKS-IDPWERKSYWKNMLEA-------VHTIH- 144

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPE--- 686
             + GI+H D+K  N L+ +  + K+ DFG++        + V  +  G+  Y+ PE   
Sbjct: 145 --QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 201

Query: 687 --------YFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR 738
                      + +++ KSDV+S G +L+ +   +       P           +  K  
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK------TP-----FQQIINQISK-- 248

Query: 739 SLKSIIDPHLKGNYSPESLEKFG-EIAEKCLDDEGKNRPTMGEVLWH 784
            L +IIDP+ +  + P+  EK   ++ + CL  + K R ++ E+L H
Sbjct: 249 -LHAIIDPNHEIEF-PDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  140 bits (354), Expect = 1e-35
 Identities = 58/194 (29%), Positives = 90/194 (46%), Gaps = 18/194 (9%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           IG G FG V  G+       A+K     +      F  E  ++++LRH +LV L+G   E
Sbjct: 201 IGKGEFGDVMLGDYRGNK-VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 257

Query: 581 QNEMI-LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
           +   + +V EYMA G+L  +L       L     L   +     + YL        +HRD
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRD 314

Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGS-FGY--LDPEYFWRQQLTEK 696
           +   N+L+ E+ VAK+SDFGL+K          S+             PE    ++ + K
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTK--------EASSTQDTGKLPVKWTAPEALREKKFSTK 366

Query: 697 SDVYSFGVVLFEVV 710
           SDV+SFG++L+E+ 
Sbjct: 367 SDVWSFGILLWEIY 380

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  137 bits (346), Expect = 1e-35
 Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 28/210 (13%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVS 573
           +G G FG+V++G++            A+K      SEQ   +F  E  ++SK  H+++V 
Sbjct: 38  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWKQRLDACIGAARGLHYLH 628
            IG   +     ++ E MA G L+S L       S    L     L      A G  YL 
Sbjct: 98  CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL- 156

Query: 629 TGAERGIIHRDVKTTNILLD---ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL-- 683
              E   IHRD+   N LL       VAK+ DFG+++      +       KG    L  
Sbjct: 157 --EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-----RKGGCAMLPV 209

Query: 684 ---DPEYFWRQQLTEKSDVYSFGVVLFEVV 710
               PE F     T K+D +SFGV+L+E+ 
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  135 bits (342), Expect = 2e-35
 Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 15/197 (7%)

Query: 521 IGVGGFGKVFKGE----IEDCTLAAIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSLI 575
           +G G FG+V++G       +    A+K      +     +F +E  ++  L H H+V LI
Sbjct: 20  LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGI 635
           G  +E+   I + E    G L  +L  +    L     +   +   + + YL        
Sbjct: 80  GIIEEEPTWI-IMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYL---ESINC 134

Query: 636 IHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSF--GYLDPEYFWRQQL 693
           +HRD+   NIL+      K+ DFGLS+    +E      A        ++ PE    ++ 
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSR---YIEDEDYYKASVTRLPIKWMSPESINFRRF 191

Query: 694 TEKSDVYSFGVVLFEVV 710
           T  SDV+ F V ++E++
Sbjct: 192 TTASDVWMFAVCMWEIL 208

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  135 bits (342), Expect = 2e-35
 Identities = 67/286 (23%), Positives = 115/286 (40%), Gaps = 32/286 (11%)

Query: 520 MIGVGGFGKVFKGE-IEDCTLAAIKRAN--PQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
            IG G +G+  K     D  +   K  +    +E       +E+ +L +L+H ++V    
Sbjct: 13  TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72

Query: 577 -FCDEQNEMI-LVYEYMANGTLRSHL--FGSDLPPLTWKQRLDACIGAARGLHYLHT--G 630
              D  N  + +V EY   G L S +     +   L  +  L         L   H    
Sbjct: 73  RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT-HVSTAVKGSFGYLDPEYFW 689
               ++HRD+K  N+ LD     K+ DFGL++    + H    +    G+  Y+ PE   
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI---LNHDTSFAKTFVGTPYYMSPEQMN 189

Query: 690 RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK 749
           R    EKSD++S G +L+E+           P    +  + A K ++ +         + 
Sbjct: 190 RMSYNEKSDIWSLGCLLYELCALM------PPFTAFSQKELAGKIREGKF------RRIP 237

Query: 750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH---LEYVLQLH 792
             YS E      EI  + L+ +  +RP++ E+L +   LE+    H
Sbjct: 238 YRYSDE----LNEIITRMLNLKDYHRPSVEEILENPLILEHHHHHH 279

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  137 bits (346), Expect = 2e-35
 Identities = 65/308 (21%), Positives = 114/308 (37%), Gaps = 64/308 (20%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLV 572
           +G G FGKV                 A+K    +          +E++M+++L  H ++V
Sbjct: 53  LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112

Query: 573 SLIGFCDEQNEMILVYEYMANGTLRSHL---------------------FGSDLPPLTWK 611
           +L+G C     + L++EY   G L ++L                        DL  LT++
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172

Query: 612 QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH 671
             L      A+G+ +L     +  +HRD+   N+L+    V K+ DFGL++    +    
Sbjct: 173 DLLCFAYQVAKGMEFL---EFKSCVHRDLAARNVLVTHGKVVKICDFGLAR---DIMSDS 226

Query: 672 VSTAVKGSFGYL-----DPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN 726
               V      L      PE  +    T KSDV+S+G++L+E+        P +P D   
Sbjct: 227 N--YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANF 284

Query: 727 LADWAMKWQKQRSLKSIIDPHLKGNY---SPES-LEKFGEIAEKCLDDEGKNRPTMGEVL 782
                                ++  +    P    E+   I + C   + + RP+   + 
Sbjct: 285 YK------------------LIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLT 326

Query: 783 WHLEYVLQ 790
             L   L 
Sbjct: 327 SFLGCQLA 334

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  137 bits (346), Expect = 2e-35
 Identities = 70/286 (24%), Positives = 120/286 (41%), Gaps = 48/286 (16%)

Query: 520 MIGVGGFGKVFKGEIEDCTLAAIKRAN--PQSEQGLAEFETEIEMLSKLRH--RHLVSLI 575
            IG GG  KVF+   E   + AIK  N      Q L  +  EI  L+KL+     ++ L 
Sbjct: 16  QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75

Query: 576 GFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLT----WKQRLDACIGAARGLHYLHT 629
            +      + +V E   N  L S L    S + P      WK  L+A       +H +H 
Sbjct: 76  DYEITDQYIYMVMEC-GNIDLNSWLKKKKS-IDPWERKSYWKNMLEA-------VHTIH- 125

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPE--- 686
             + GI+H D+K  N L+ +  + K+ DFG++        + V  +  G+  Y+ PE   
Sbjct: 126 --QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 182

Query: 687 --------YFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR 738
                      + +++ KSDV+S G +L+ +   +       P        +     +  
Sbjct: 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK------TP--------FQQIINQIS 228

Query: 739 SLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
            L +IIDP+ +  +     +   ++ + CL  + K R ++ E+L H
Sbjct: 229 KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  137 bits (347), Expect = 2e-35
 Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 28/210 (13%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVS 573
           +G G FG+V++G++            A+K      SEQ   +F  E  ++SK  H+++V 
Sbjct: 79  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWKQRLDACIGAARGLHYLH 628
            IG   +     ++ E MA G L+S L       S    L     L      A G  YL 
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL- 197

Query: 629 TGAERGIIHRDVKTTNILLD---ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL-- 683
              E   IHRD+   N LL       VAK+ DFG+++      +       KG    L  
Sbjct: 198 --EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY-----RKGGCAMLPV 250

Query: 684 ---DPEYFWRQQLTEKSDVYSFGVVLFEVV 710
               PE F     T K+D +SFGV+L+E+ 
Sbjct: 251 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  137 bits (347), Expect = 2e-35
 Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 10/196 (5%)

Query: 521 IGVGGFGKVFKGEI----EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLI 575
           +G G FG+V  G +    +     AIK      +E+   +F  E  ++ +  H +++ L 
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGI 635
           G   +   +++V EYM NG+L S L   D    T  Q +    G A G+ YL   ++ G 
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYL---SDMGY 168

Query: 636 IHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT-HVSTAVKGSFGYLDPEYFWRQQLT 694
           +HRD+   NIL++ N V K+SDFGL +         + +   K    +  PE    ++ T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228

Query: 695 EKSDVYSFGVVLFEVV 710
             SDV+S+G+VL+EV+
Sbjct: 229 SASDVWSYGIVLWEVM 244

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  135 bits (343), Expect = 3e-35
 Identities = 69/308 (22%), Positives = 122/308 (39%), Gaps = 64/308 (20%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLV 572
           +G G FG+V + +         C   A+K      +        +E+++L  +  H ++V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94

Query: 573 SLIGFCDEQNE-MILVYEYMANGTLRSHL--------------FGSDLPPLTWKQRLDAC 617
           +L+G C +    ++++ E+   G L ++L                     LT +  +   
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
              A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL++    +         +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYV--R 206

Query: 678 GSFGYL-----DPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTL---PKDQINLAD 729
                L      PE  + +  T +SDV+SFGV+L+E+         +L   P        
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF--------SLGASP-------- 250

Query: 730 WAMKWQKQRSLKSIIDPHLKGNY---SPES-LEKFGEIAEKCLDDEGKNRPTMGEVLWHL 785
               +   +  +      LK      +P+    +  +    C   E   RPT  E++ HL
Sbjct: 251 ----YPGVKIDEEFCR-RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305

Query: 786 EYVLQLHE 793
             +LQ + 
Sbjct: 306 GNLLQANA 313

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  135 bits (341), Expect = 3e-35
 Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 20/200 (10%)

Query: 521 IGVGGFGKVFKGEI---EDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLI 575
           +G G FG V KG     +     A+K  +          E   E  ++ +L + ++V +I
Sbjct: 25  LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGI 635
           G C+ ++ M+ V E    G L  +L  +    +  K  ++     + G+ YL    E   
Sbjct: 85  GICEAESWML-VMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYL---EESNF 138

Query: 636 IHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA-----VKGSFGYLDPEYFWR 690
           +HRD+   N+LL     AK+SDFGLSK   + E+ + +       VK    +  PE    
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK----WYAPECINY 194

Query: 691 QQLTEKSDVYSFGVVLFEVV 710
            + + KSDV+SFGV+++E  
Sbjct: 195 YKFSSKSDVWSFGVLMWEAF 214

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  136 bits (344), Expect = 3e-35
 Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 42/224 (18%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVS 573
           IG G FG+VF+         E  T+ A+K    + S    A+F+ E  ++++  + ++V 
Sbjct: 55  IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHL----------------------FGSDLPPLTWK 611
           L+G C     M L++EYMA G L   L                           PPL+  
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174

Query: 612 QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH 671
           ++L      A G+ YL   +ER  +HRD+ T N L+ EN V K++DFGLS+   ++    
Sbjct: 175 EQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSR---NIYSA- 227

Query: 672 VSTAVKGSFGYL-----DPEYFWRQQLTEKSDVYSFGVVLFEVV 710
                      +      PE  +  + T +SDV+++GVVL+E+ 
Sbjct: 228 -DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  141 bits (357), Expect = 4e-35
 Identities = 58/197 (29%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 521 IGVGGFGKVFKG----EIEDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLI 575
           IG G FG V +G            AIK      S+    +F  E   + +  H H+V LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGI 635
           G   E    I + E    G LRS L       L     +      +  L YL     +  
Sbjct: 458 GVITENPVWI-IMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYL---ESKRF 512

Query: 636 IHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSF--GYLDPEYFWRQQL 693
           +HRD+   N+L+  N   K+ DFGLS+    ME +    A KG     ++ PE    ++ 
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSR---YMEDSTYYKASKGKLPIKWMAPESINFRRF 569

Query: 694 TEKSDVYSFGVVLFEVV 710
           T  SDV+ FGV ++E++
Sbjct: 570 TSASDVWMFGVCMWEIL 586

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  135 bits (341), Expect = 5e-35
 Identities = 51/197 (25%), Positives = 97/197 (49%), Gaps = 11/197 (5%)

Query: 520 MIGVGGFGKVFKG----EIEDCTLA-AIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVS 573
           ++G G FG V+KG    E E   +  AIK      S +   E   E  +++ + + H+  
Sbjct: 22  VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           L+G C      + + + M  G L  ++       +  +  L+ C+  A+G++YL    +R
Sbjct: 82  LLGICLTSTVQL-ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYL---EDR 136

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL 693
            ++HRD+   N+L+      K++DFGL+K   + E  + +   K    ++  E    +  
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196

Query: 694 TEKSDVYSFGVVLFEVV 710
           T +SDV+S+GV ++E++
Sbjct: 197 THQSDVWSYGVTVWELM 213

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  135 bits (341), Expect = 6e-35
 Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 29/206 (14%)

Query: 521 IGVGGFGKVFKG-----EIEDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSL 574
           IG G FG+V+KG       +     AIK      +E+   +F  E  ++ +  H +++ L
Sbjct: 52  IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
            G   +   M+++ EYM NG L   L   D    +  Q +    G A G+ YL   A   
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYL---ANMN 167

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS----------TAVKGSFGYLD 684
            +HRD+   NIL++ N V K+SDFGLS+          +          TA         
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA--------- 218

Query: 685 PEYFWRQQLTEKSDVYSFGVVLFEVV 710
           PE    ++ T  SDV+SFG+V++EV+
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVM 244

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  134 bits (340), Expect = 7e-35
 Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 13/197 (6%)

Query: 521 IGVGGFGKVFKGEIEDCTLA-----AIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
           +G G FG V KG       +      IK         Q        +  +  L H H+V 
Sbjct: 21  LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVR 79

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           L+G C   +  + V +Y+  G+L  H+       L  +  L+  +  A+G++YL    E 
Sbjct: 80  LLGLCPGSSLQL-VTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYL---EEH 134

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL 693
           G++HR++   N+LL      +++DFG++   P  +   + +  K    ++  E     + 
Sbjct: 135 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 194

Query: 694 TEKSDVYSFGVVLFEVV 710
           T +SDV+S+GV ++E++
Sbjct: 195 THQSDVWSYGVTVWELM 211

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  133 bits (337), Expect = 8e-35
 Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 20/200 (10%)

Query: 521 IGVGGFGKVFKGEIEDC---TLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLI 575
           +G G FG V +G           AIK  +   +      E   E +++ +L + ++V LI
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKAD-TEEMMREAQIMHQLDNPYIVRLI 76

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGI 635
           G C  +  M+ V E    G L   L G     +      +     + G+ YL    E+  
Sbjct: 77  GVCQAEALML-VMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYL---EEKNF 131

Query: 636 IHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA-----VKGSFGYLDPEYFWR 690
           +HRD+   N+LL     AK+SDFGLSK   + +  + + +     +K    +  PE    
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK----WYAPECINF 187

Query: 691 QQLTEKSDVYSFGVVLFEVV 710
           ++ + +SDV+S+GV ++E +
Sbjct: 188 RKFSSRSDVWSYGVTMWEAL 207

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  133 bits (336), Expect = 1e-34
 Identities = 61/297 (20%), Positives = 108/297 (36%), Gaps = 46/297 (15%)

Query: 513 NNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRH 570
            +F+    +G GGFG VF+ +   D    AIKR   P  E    +   E++ L+KL H  
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64

Query: 571 LVSLIGFCDEQNEMI------------LVYEYMANGTLRSHLFG-SDLPPLTWKQRLDAC 617
           +V       E+N               +  +      L+  + G   +        L   
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK----------TGPSM 667
           +  A  + +LH    +G++HRD+K +NI    + V K+ DFGL                M
Sbjct: 125 LQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181

Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
                 T   G+  Y+ PE       + K D++S G++LFE++                 
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYP--------------F 227

Query: 728 ADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
           +    + +    ++++  P L     P        + +  L      RP    ++ +
Sbjct: 228 STQMERVRTLTDVRNLKFPPLFTQKYPC----EYVMVQDMLSPSPMERPEAINIIEN 280

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  135 bits (342), Expect = 1e-34
 Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 37/219 (16%)

Query: 521 IGVGGFGKVFKGEI--------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRH 570
           +G G FG+V   E            T  A+K      +E+ L++  +E+EM+  + +H++
Sbjct: 77  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHL--------------FGSDLPPLTWKQRLDA 616
           +++L+G C +   + ++ EY + G LR +L                +    L+ K  +  
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196

Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
               ARG+ YL   A +  IHRD+   N+L+ E+ V K++DFGL++    + H       
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR---DIHHI--DYYK 248

Query: 677 KGSFGYL-----DPEYFWRQQLTEKSDVYSFGVVLFEVV 710
           K + G L      PE  + +  T +SDV+SFGV+L+E+ 
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 287

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  130 bits (330), Expect = 7e-34
 Identities = 50/198 (25%), Positives = 79/198 (39%), Gaps = 13/198 (6%)

Query: 521 IGVGGFGKVFKGE----IEDCTLAAIK---RANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
           +G G FG V +GE           A+K          + + +F  E+  +  L HR+L+ 
Sbjct: 26  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           L G        + V E    G+L   L                 +  A G+ YL     +
Sbjct: 86  LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYL---ESK 140

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
             IHRD+   N+LL    + K+ DFGL +    + +H  +    K  F +  PE    + 
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 200

Query: 693 LTEKSDVYSFGVVLFEVV 710
            +  SD + FGV L+E+ 
Sbjct: 201 FSHASDTWMFGVTLWEMF 218

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  129 bits (327), Expect = 1e-33
 Identities = 70/274 (25%), Positives = 114/274 (41%), Gaps = 34/274 (12%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRAN--PQSEQGLAEFETEIEMLSKLRHRHLVSLIG- 576
           IG G F  V+KG + E     A         ++     F+ E EML  L+H ++V     
Sbjct: 34  IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDS 93

Query: 577 ---FCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
                  +  ++LV E M +GTL+++L  F      +  K     C    +GL +LHT  
Sbjct: 94  WESTVKGKKCIVLVTELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHT-R 148

Query: 632 ERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
              IIHRD+K  NI +       K+ D GL+     ++    + AV G+  ++ PE +  
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT----LKRASFAKAVIGTPEFMAPEMY-E 203

Query: 691 QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG 750
           ++  E  DVY+FG+ + E+  +    +      QI          K  S   +  P +K 
Sbjct: 204 EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR--VTSGVKPASFDKVAIPEVK- 260

Query: 751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                      EI E C+      R ++ ++L H
Sbjct: 261 -----------EIIEGCIRQNKDERYSIKDLLNH 283

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  130 bits (328), Expect = 1e-31
 Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 18/199 (9%)

Query: 521 IGVGGFGKVFKGE--IEDCTLA-AIKRANP-QSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           +G G FG V +G   +    +  AIK       +    E   E +++ +L + ++V LIG
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGII 636
            C  +  M+ V E    G L   L G     +      +     + G+ YL    E+  +
Sbjct: 404 VCQAEALML-VMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYL---EEKNFV 458

Query: 637 HRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA-----VKGSFGYLDPEYFWRQ 691
           HR++   N+LL     AK+SDFGLSK   + +  + + +     +K    +  PE    +
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK----WYAPECINFR 514

Query: 692 QLTEKSDVYSFGVVLFEVV 710
           + + +SDV+S+GV ++E +
Sbjct: 515 KFSSRSDVWSYGVTMWEAL 533

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  127 bits (319), Expect = 2e-30
 Identities = 67/242 (27%), Positives = 104/242 (42%), Gaps = 31/242 (12%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAE-FETEIEMLSKLRHRHLVSLIGF 577
            +G GGFG V +    +     AIK+   +      E +  EI+++ KL H ++VS    
Sbjct: 21  RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80

Query: 578 CDEQNEM------ILVYEYMANGTLRSHLFGSD-LPPLTWKQ--RLDACIGAARGLHYLH 628
            D   ++      +L  EY   G LR +L   +    L       L + I +A  L YLH
Sbjct: 81  PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA--LRYLH 138

Query: 629 TGAERGIIHRDVKTTNILLD---ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDP 685
              E  IIHRD+K  NI+L    +  + K+ D G +K    ++   + T   G+  YL P
Sbjct: 139 ---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE---LDQGELCTEFVGTLQYLAP 192

Query: 686 EYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           E   +++ T   D +SFG + FE +       P LP  Q       ++W  +   KS   
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFR---PFLPNWQ------PVQWHGKVREKSNEH 243

Query: 746 PH 747
             
Sbjct: 244 IV 245

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  120 bits (304), Expect = 6e-30
 Identities = 45/215 (20%), Positives = 93/215 (43%), Gaps = 30/215 (13%)

Query: 521 IGVGGFGKV---------------FKGEIEDCTLAAIKRANPQSEQGLAE-FETEIEMLS 564
           +  G F K+                K  +E          +  S +   + F+ E+++++
Sbjct: 39  LNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIIT 98

Query: 565 KLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGA---- 620
            +++ + ++  G     +E+ ++YEYM N ++        +    +   +   +      
Sbjct: 99  DIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIK 158

Query: 621 --ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
                  Y+H   E+ I HRDVK +NIL+D+N   K+SDFG S+    M    +  +  G
Sbjct: 159 SVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEY---MVDKKIKGSR-G 212

Query: 679 SFGYLDPEYFWRQQLT--EKSDVYSFGVVLFEVVC 711
           ++ ++ PE+F  +      K D++S G+ L+ +  
Sbjct: 213 TYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFY 247

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  122 bits (308), Expect = 6e-30
 Identities = 64/321 (19%), Positives = 113/321 (35%), Gaps = 66/321 (20%)

Query: 508 IRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL- 566
           + V   +F    ++G G  G +    + D    A+KR  P+        + E+++L +  
Sbjct: 19  VIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFA---DREVQLLRESD 75

Query: 567 RHRHLVSLIGFCDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGA 620
            H +++       ++    +  E  A  TL      +        P    +Q        
Sbjct: 76  EHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQ-------T 127

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDE-----NFVAKMSDFGLSK-TGPSMEHTHVST 674
             GL +LH      I+HRD+K  NIL+          A +SDFGL K            +
Sbjct: 128 TSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS 184

Query: 675 AVKGSFGYLDPEYF---WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA 731
            V G+ G++ PE      ++  T   D++S G V + V+        + P          
Sbjct: 185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEG-----SHP---------- 229

Query: 732 MKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAE-------KCLDDEGKNRPTMGEVLWH 784
             + K    ++ I   L G  S + L               K +  + + RP+   VL H
Sbjct: 230 --FGKSLQRQANI---LLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284

Query: 785 LEYVLQLHEAWMRTDDRQNSF 805
                     +  + ++Q  F
Sbjct: 285 ---------PFFWSLEKQLQF 296

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  120 bits (302), Expect = 8e-30
 Identities = 64/337 (18%), Positives = 111/337 (32%), Gaps = 66/337 (19%)

Query: 478 STANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGE-IED 536
           S   A G       G   +     R  +              ++  GGF  V++ + +  
Sbjct: 6   SLGGASGRDQSDFVGQT-VELGELRLRVRR------------VLAEGGFAFVYEAQDVGS 52

Query: 537 CTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGFC-------DEQNEMILVY 588
               A+KR     E+       E+  + KL  H ++V             D      L+ 
Sbjct: 53  GREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112

Query: 589 EYMANGTLRSHLFGSDLP-PLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL 647
             +  G L   L   +   PL+    L       R + ++H   +  IIHRD+K  N+LL
Sbjct: 113 TELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR-QKPPIIHRDLKVENLLL 171

Query: 648 DENFVAKMSDFGLSKTGPSMEHTHVSTAVK-----------GSFGYLDPE---YFWRQQL 693
                 K+ DFG + T  S    +  +A +            +  Y  PE    +    +
Sbjct: 172 SNQGTIKLCDFGSA-TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPI 230

Query: 694 TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS 753
            EK D+++ G +L+ +           P +               +   I    + G YS
Sbjct: 231 GEKQDIWALGCILYLLCFR------QHPFED-------------GAKLRI----VNGKYS 267

Query: 754 -PESL---EKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
            P        F  +    L    + R ++ EV+  L+
Sbjct: 268 IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  119 bits (300), Expect = 9e-30
 Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 14/195 (7%)

Query: 520 MIGVGGFGKVFKGEIEDCTLA---AIK--RANPQSEQGLAE-FETEIEMLSKLRHRHLVS 573
           ++G GG G V++ E  D       A+K       S+       + E     +L+  H+V 
Sbjct: 41  LVGRGGMGDVYEAE--DTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVP 98

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           +  F +   ++ +    +    L + L      PL   + +         L   H     
Sbjct: 99  IHDFGEIDGQLYVDMRLINGVDLAAML--RRQGPLAPPRAVAIVRQIGSALDAAH---AA 153

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL 693
           G  HRDVK  NIL+  +  A + DFG++      + T +   V G+  Y+ PE F     
Sbjct: 154 GATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYMAPERFSESHA 212

Query: 694 TEKSDVYSFGVVLFE 708
           T ++D+Y+   VL+E
Sbjct: 213 TYRADIYALTCVLYE 227

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  118 bits (297), Expect = 1e-29
 Identities = 59/300 (19%), Positives = 108/300 (36%), Gaps = 56/300 (18%)

Query: 512 TNNFDESLMIGVGGFGKVFKG-EIEDCTLAAIKRAN--PQSEQGLAEFETEIEMLSKL-R 567
           T  F E   IG G FG VFK  +  D  + AIKR+               E+   + L +
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69

Query: 568 HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWKQRLDACIGAARGLH 625
           H H+V       E + M++  EY   G+L   +      +      +  D  +   RGL 
Sbjct: 70  HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129

Query: 626 YLHTGAERGIIHRDVKTTNILLDEN-------------------FVAKMSDFGLSKTGPS 666
           Y+H      ++H D+K +NI +                       + K+ D G       
Sbjct: 130 YIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT---R 183

Query: 667 MEHTHVSTAVKGSFGYLDPEYFWRQQL--TEKSDVYSFGVVLFEVVCARAVINPTLPKDQ 724
           +    V    +G   +L  E   ++      K+D+++  + +     A       LP++ 
Sbjct: 184 ISSPQV---EEGDSRFLANE-VLQENYTHLPKADIFALALTVVCAAGAE-----PLPRN- 233

Query: 725 INLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                   +W +   ++    P +    S E    F E+ +  +  + + RP+   ++ H
Sbjct: 234 ------GDQWHE---IRQGRLPRIPQVLSQE----FTELLKVMIHPDPERRPSAMALVKH 280

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  119 bits (299), Expect = 2e-29
 Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 27/211 (12%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAE-FETEIEMLSKLRHRHLVSLIGF 577
           ++G G    VF+G   +   L AIK  N  S     +    E E+L KL H+++V L   
Sbjct: 16  ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75

Query: 578 CDEQN--EMILVYEYMANGTLRSHLF-GSDLPPLTWKQ--RLDACIGAARGLHYLHTGAE 632
            +E      +L+ E+   G+L + L   S+   L   +   +   +     +++L    E
Sbjct: 76  EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG--MNHLR---E 130

Query: 633 RGIIHRDVKTTNILL----DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
            GI+HR++K  NI+     D   V K++DFG ++    +E      ++ G+  YL P+ +
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE---LEDDEQFVSLYGTEEYLHPDMY 187

Query: 689 WRQQL--------TEKSDVYSFGVVLFEVVC 711
            R  L            D++S GV  +    
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAAT 218

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  120 bits (303), Expect = 3e-29
 Identities = 62/323 (19%), Positives = 111/323 (34%), Gaps = 75/323 (23%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCD 579
           +G G  G V           A+KR              EI++L++   H +++       
Sbjct: 23  LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIA---LMEIKLLTESDDHPNVIRYYCSET 79

Query: 580 EQNEMILVYEYMANGTL-----RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
               + +  E   N  L       ++   +L        +      A G+ +LH      
Sbjct: 80  TDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLK 135

Query: 635 IIHRDVKTTNILLD-------------ENFVAKMSDFGLSK---TGPSMEHTHVSTAVKG 678
           IIHRD+K  NIL+              EN    +SDFGL K   +G S   T+++    G
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPS-G 194

Query: 679 SFGYLDPEYF-------WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA 731
           + G+  PE          +++LT   D++S G V + ++          P          
Sbjct: 195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG-----KHP---------- 239

Query: 732 MKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIA---------EKCLDDEGKNRPTMGEVL 782
               K     +I    ++G +S + ++   + +          + +D +   RPT  +VL
Sbjct: 240 -FGDKYSRESNI----IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 294

Query: 783 WHLEYVLQLHEAWMRTDDRQNSF 805
            H                ++  F
Sbjct: 295 RH---------PLFWPKSKKLEF 308

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  117 bits (295), Expect = 4e-29
 Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 14/194 (7%)

Query: 521 IGVGGFGKVFKGEIEDCTLA---AIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSL 574
           +G GG   V+  E  D  L    AIK         E+ L  FE E+   S+L H+++VS+
Sbjct: 19  LGGGGMSTVYLAE--DTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
           I   +E +   LV EY+   TL  ++      PL+    ++       G+ + H   +  
Sbjct: 77  IDVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAH---DMR 131

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
           I+HRD+K  NIL+D N   K+ DFG++K       T  +  + G+  Y  PE    +   
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVL-GTVQYFSPEQAKGEATD 190

Query: 695 EKSDVYSFGVVLFE 708
           E +D+YS G+VL+E
Sbjct: 191 ECTDIYSIGIVLYE 204

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  118 bits (296), Expect = 1e-28
 Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 27/211 (12%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAE-FETEIEMLSKLRHRHLVSLIGF 577
           ++G G    VF+G   +   L AIK  N  S     +    E E+L KL H+++V L   
Sbjct: 16  ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75

Query: 578 CDEQN--EMILVYEYMANGTLRSHLFG-SDLPPLTWKQ--RLDACIGAARGLHYLHTGAE 632
            +E      +L+ E+   G+L + L   S+   L   +   +   +     +++L    E
Sbjct: 76  EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG--MNHLR---E 130

Query: 633 RGIIHRDVKTTNILL----DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
            GI+HR++K  NI+     D   V K++DFG ++    +E      ++ G+  YL P+ +
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE---LEDDEQFVSLYGTEEYLHPDMY 187

Query: 689 WRQQL--------TEKSDVYSFGVVLFEVVC 711
            R  L            D++S GV  +    
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAAT 218

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  116 bits (293), Expect = 2e-28
 Identities = 36/225 (16%), Positives = 73/225 (32%), Gaps = 23/225 (10%)

Query: 507 EIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLA------AIKRANPQSEQGLAEFETEI 560
           E ++ +       ++G G F +V++    D   A       +K   P +          +
Sbjct: 59  EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLM 118

Query: 561 EMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL---FGSDLPPLTWKQRLDAC 617
           E L        +        QN  +LV E  + GTL + +     +    +     +   
Sbjct: 119 ERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFA 178

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILL-----------DENFVAKMSDFGLSKTGPS 666
           +     +  +H   +  IIH D+K  N +L           D +    + D G S     
Sbjct: 179 MRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKL 235

Query: 667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
                + TA   + G+   E    +    + D +     ++ ++ 
Sbjct: 236 FPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLF 280

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  115 bits (290), Expect = 2e-28
 Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 18/205 (8%)

Query: 520 MIGVGGFGKVFKGEIEDCTLA---AIK--RANPQSEQG-LAEFETEIEMLSKLRHRHLVS 573
           ++G GG  +V      D       A+K  RA+   +      F  E +  + L H  +V+
Sbjct: 19  ILGFGGMSEVHLAR--DLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 76

Query: 574 L--IGFCDEQNEMI--LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHT 629
           +   G  +     +  +V EY+   TLR  +      P+T K+ ++    A + L++ H 
Sbjct: 77  VYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQALNFSH- 133

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST-AVKGSFGYLDPEYF 688
             + GIIHRDVK  NI++      K+ DFG+++      ++   T AV G+  YL PE  
Sbjct: 134 --QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191

Query: 689 WRQQLTEKSDVYSFGVVLFEVVCAR 713
               +  +SDVYS G VL+EV+   
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGE 216

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  115 bits (289), Expect = 2e-28
 Identities = 75/280 (26%), Positives = 119/280 (42%), Gaps = 46/280 (16%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           +G G FGKV+K    E   LAA K    +SE+ L ++  EIE+L+   H ++V L+G   
Sbjct: 27  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
              ++ ++ E+   G + + +       LT  Q    C      L++LH    + IIHRD
Sbjct: 87  HDGKLWIMIEFCPGGAVDA-IMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRD 142

Query: 640 VKTTNILLDENFVAKMSDFG----LSKTGPSMEHTHVSTA------VKGSFGYLDPEYFW 689
           +K  N+L+      +++DFG      KT      + + T       V       D  Y  
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSAKNLKTL-QKRDSFIGTPYWMAPEVVMCETMKDTPY-- 199

Query: 690 RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID---P 746
                 K+D++S G+ L E+    A I P  P  ++N     M     R L  I     P
Sbjct: 200 ----DYKADIWSLGITLIEM----AQIEP--PHHELN----PM-----RVLLKIAKSDPP 240

Query: 747 HLK--GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
            L     +S E    F +  +  LD   + RP+  ++L H
Sbjct: 241 TLLTPSKWSVE----FRDFLKIALDKNPETRPSAAQLLEH 276

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  120 bits (302), Expect = 3e-28
 Identities = 40/204 (19%), Positives = 75/204 (36%), Gaps = 27/204 (13%)

Query: 520 MIGVGGFGKVFKGEIEDCTLA----AIKRANPQSEQGLAE-FETEIEMLSKLRHRHLVSL 574
            I  GG G ++     D  +      +K      +         E + L+++ H  +V +
Sbjct: 87  CIAHGGLGWIYLAL--DRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQI 144

Query: 575 IGFCDEQNEMI-----LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHT 629
             F +  +        +V EY+   +L+          L   + +   +     L YLH 
Sbjct: 145 FNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLH- 199

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW 689
               G+++ D+K  NI+L E  + K+ D G       +        + G+ G+  PE   
Sbjct: 200 --SIGLVYNDLKPENIMLTEEQL-KLIDLGAVSR---INSF---GYLYGTPGFQAPEIV- 249

Query: 690 RQQLTEKSDVYSFGVVLFEVVCAR 713
           R   T  +D+Y+ G  L  +    
Sbjct: 250 RTGPTVATDIYTVGRTLAALTLDL 273

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  113 bits (286), Expect = 3e-28
 Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 33/217 (15%)

Query: 509 RVATNNFDESLMIGVGGFGKVFKG-EIEDCTLAAIK-------RANPQSEQGLAEFETEI 560
           + A  +F+    +G G FG V+   E +   + A+K              Q       E+
Sbjct: 5   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREV 60

Query: 561 EMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGA 620
           E+ S LRH +++ L G+  +   + L+ EY   GT+   L            + D    A
Sbjct: 61  EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTA 112

Query: 621 ------ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVST 674
                 A  L Y H    + +IHRD+K  N+LL      K++DFG S   PS   T    
Sbjct: 113 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT---D 166

Query: 675 AVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
              G+  YL PE    +   EK D++S GV+ +E + 
Sbjct: 167 LC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 202

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  114 bits (287), Expect = 4e-28
 Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 18/198 (9%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           ++G G +G V+ G ++ +    AIK    +  +       EI +   L+H+++V  +G  
Sbjct: 29  VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88

Query: 579 DEQNEMILVYEYMANGTLRS---HLFGSDLPPLTWKQRLDACIGAA--RGLHYLHTGAER 633
            E   + +  E +  G+L +     +G    PL   ++           GL YLH   + 
Sbjct: 89  SENGFIKIFMEQVPGGSLSALLRSKWG----PLKDNEQTIGFYTKQILEGLKYLH---DN 141

Query: 634 GIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
            I+HRD+K  N+L++  + V K+SDFG SK          +    G+  Y+ PE   +  
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAPEIIDKGP 199

Query: 693 L--TEKSDVYSFGVVLFE 708
               + +D++S G  + E
Sbjct: 200 RGYGKAADIWSLGCTIIE 217

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  112 bits (283), Expect = 1e-27
 Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 27/214 (12%)

Query: 509 RVATNNFDESLMIGVGGFGKVFKG-EIEDCTLAAIK---RANPQSEQGLAEFETEIEMLS 564
           +   ++FD    +G G FG V+   E ++  + A+K   ++  + E    +   EIE+ S
Sbjct: 10  KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69

Query: 565 KLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGA---- 620
            LRH +++ +  +  ++  + L+ E+   G L   L            R D    A    
Sbjct: 70  HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--------QKHGRFDEQRSATFME 121

Query: 621 --ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME-HTHVSTAVK 677
             A  LHY H   ER +IHRD+K  N+L+      K++DFG S   PS+   T     + 
Sbjct: 122 ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRT-----MC 173

Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           G+  YL PE    +   EK D++  GV+ +E + 
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLV 207

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  111 bits (279), Expect = 5e-27
 Identities = 85/312 (27%), Positives = 131/312 (41%), Gaps = 63/312 (20%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           IG G FG+VFKG +     + AIK  +  ++E  + + + EI +LS+    ++    G  
Sbjct: 30  IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDL---PPLTWKQRLDACIGAARGLHYLHTGAERGI 635
            +  ++ ++ EY+  G+        DL    PL   Q         +GL YLH       
Sbjct: 90  LKDTKLWIIMEYLGGGSA------LDLLEPGPLDETQIATILREILKGLDYLH---SEKK 140

Query: 636 IHRDVKTTNILLDENFVAKMSDFG----LSKTGPSMEHTHVST----AVKGSFGYLDPEY 687
           IHRD+K  N+LL E+   K++DFG    L+ T     +T V T    A         PE 
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNTFVGTPFWMA---------PEV 190

Query: 688 FWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID-- 745
             +     K+D++S G+   E+    A   P  P  +++     M     + L  I    
Sbjct: 191 IKQSAYDSKADIWSLGITAIEL----ARGEP--PHSELH----PM-----KVLFLIPKNN 235

Query: 746 -PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH---------LEYVLQLHEAW 795
            P L+GNYS        E  E CL+ E   RPT  E+L H           Y+ +L + +
Sbjct: 236 PPTLEGNYSKP----LKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRY 291

Query: 796 MRTDDRQNSFSS 807
            R    Q+   S
Sbjct: 292 KRWKAEQSHDDS 303

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  113 bits (283), Expect = 5e-27
 Identities = 62/376 (16%), Positives = 107/376 (28%), Gaps = 99/376 (26%)

Query: 522 GVGGFGKVFKG-EIEDCTLAAIKRAN--PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           G      V             ++R N    S + +   + E+ +     H ++V      
Sbjct: 36  GFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATF 95

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD----ACI--GAARGLHYLHTGAE 632
              NE+ +V  +MA G+ +      DL    +   ++    A I  G  + L Y+H    
Sbjct: 96  IADNELWVVTSFMAYGSAK------DLICTHFMDGMNELAIAYILQGVLKALDYIH---H 146

Query: 633 RGIIHRDVKTTNILLDENFVAKMSDFGLS----------KTGPSMEHTHVSTAVKGSFGY 682
            G +HR VK ++IL+  +    +S    +          +         V          
Sbjct: 147 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKV-------- 198

Query: 683 LDPEYFW------RQQL---TEKSDVYSFGV-------------------VLFE------ 708
                 W      +Q L     KSD+YS G+                   +L E      
Sbjct: 199 --L--PWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTV 254

Query: 709 --------VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKF 760
                   +      ++P+       L+D       + S            +SP     F
Sbjct: 255 PCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPH----F 310

Query: 761 GEIAEKCLDDEGKNRPTMGEVLWH-------------LEYVLQLHEAWMRTDDRQNSFSS 807
               E+CL      RP+   +L H             L  +L+        +  Q+   S
Sbjct: 311 HHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQSQDHS 370

Query: 808 SQALGEFAEREAEDGQ 823
                     E E   
Sbjct: 371 GIFGLVTNLEELEVDD 386

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  111 bits (280), Expect = 7e-27
 Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 29/205 (14%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIK---RANPQSEQGLAEFETEIEMLSKLRHRHLVSLI 575
            +G GGF K F+  + +   + A K   ++         +   EI +   L H+H+V   
Sbjct: 48  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGA------ARGLHYLHT 629
           GF ++ + + +V E     +L              ++ L              G  YLH 
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELH--------KRRKALTEPEARYYLRQIVLGCQYLH- 158

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLS---KTGPSMEHTHVSTAVKGSFGYLDPE 686
                +IHRD+K  N+ L+E+   K+ DFGL+   +     +       + G+  Y+ PE
Sbjct: 159 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-----LCGTPNYIAPE 211

Query: 687 YFWRQQLTEKSDVYSFGVVLFEVVC 711
              ++  + + DV+S G +++ ++ 
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMYTLLV 236

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  111 bits (279), Expect = 8e-27
 Identities = 71/328 (21%), Positives = 127/328 (38%), Gaps = 58/328 (17%)

Query: 477 NSTANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATN---NFDESLMIGVGGFGKVFKG- 532
           + ++            S  +T    +  L  +    +     D  + IG G  G V    
Sbjct: 6   HHSSGVDLGTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAR 65

Query: 533 EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMA 592
           E       A+K  + + +Q       E+ ++   +H ++V +        E+ ++ E++ 
Sbjct: 66  EKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQ 125

Query: 593 NGTLRSHLFGSDL---PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE 649
            G L      +D+     L  +Q    C    + L YLH    +G+IHRD+K+ +ILL  
Sbjct: 126 GGAL------TDIVSQVRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTL 176

Query: 650 NFVAKMSDFG----LSKTGPSMEHTHVST----AVKGSFGYLDPEYFWRQQLTEKSDVYS 701
           +   K+SDFG    +SK  P    + V T    A         PE   R     + D++S
Sbjct: 177 DGRVKLSDFGFCAQISKDVPKR-KSLVGTPYWMA---------PEVISRSLYATEVDIWS 226

Query: 702 FGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID---PHLKGN--YSPES 756
            G+++ E+        P  P    +     +     +++K + D   P LK +   SP  
Sbjct: 227 LGIMVIEM----VDGEP--PYFSDS----PV-----QAMKRLRDSPPPKLKNSHKVSPV- 270

Query: 757 LEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                +  E+ L  + + R T  E+L H
Sbjct: 271 ---LRDFLERMLVRDPQERATAQELLDH 295

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  109 bits (275), Expect = 1e-26
 Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 33/207 (15%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIK---RANPQSEQGLAEFETEIEMLSKLRHRHLVSLI 575
            +G GGF K F+  + +   + A K   ++         +   EI +   L H+H+V   
Sbjct: 22  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR--------GLHYL 627
           GF ++ + + +V E     +L              ++ L      AR        G  YL
Sbjct: 82  GFFEDNDFVFVVLELCRRRSLLELH--------KRRKALTEP--EARYYLRQIVLGCQYL 131

Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS---KTGPSMEHTHVSTAVKGSFGYLD 684
           H      +IHRD+K  N+ L+E+   K+ DFGL+   +     +       + G+  Y+ 
Sbjct: 132 H---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-----LCGTPNYIA 183

Query: 685 PEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           PE   ++  + + DV+S G +++ ++ 
Sbjct: 184 PEVLSKKGHSFEVDVWSIGCIMYTLLV 210

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  111 bits (278), Expect = 2e-26
 Identities = 31/302 (10%), Positives = 65/302 (21%), Gaps = 54/302 (17%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIK---RANPQSEQGLAEFETEIEMLSKLRHRHLVSLI 575
            + VG    VF   ++E     A+K        S   L          ++L         
Sbjct: 69  PLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEAR 128

Query: 576 GFC--------------------------DEQNEMILVYEYMANGTLRS-----HLFGSD 604
                                              +L+    +   L             
Sbjct: 129 DRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVF 187

Query: 605 LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG 664
                            R    L     +G++H      N+ +  +    + D       
Sbjct: 188 RGDEGILALHILTAQLIRLAANLQ---SKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKV 244

Query: 665 PSMEHTHVSTAVKGSFGYLDPEYFWRQ--QLTEKSDVYSFGVVLFEVVCARAVINPTLPK 722
            +               Y   E+        T   + +  G+ ++ V C      P    
Sbjct: 245 GTRGPASSVPV-----TYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL---PFGLV 296

Query: 723 DQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVL 782
                  W     +     S+          P+ ++    +  + L+ + + R    E +
Sbjct: 297 TPGIKGSWKRPSLRVPGTDSLAFGSCTP--LPDFVK---TLIGRFLNFDRRRRLLPLEAM 351

Query: 783 WH 784
             
Sbjct: 352 ET 353

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  109 bits (274), Expect = 2e-26
 Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 25/197 (12%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           +G G F +VF   +     L A+K          +  E EI +L K++H ++V+L    +
Sbjct: 17  LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76

Query: 580 EQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
                 LV + ++ G L      R      D   +  +Q L A       + YLH   E 
Sbjct: 77  STTHYYLVMQLVSGGELFDRILERGVYTEKDASLVI-QQVLSA-------VKYLH---EN 125

Query: 634 GIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
           GI+HRD+K  N+L    +EN    ++DFGLSK    ME   + +   G+ GY+ PE   +
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSK----MEQNGIMSTACGTPGYVAPEVLAQ 181

Query: 691 QQLTEKSDVYSFGVVLF 707
           +  ++  D +S GV+ +
Sbjct: 182 KPYSKAVDCWSIGVITY 198

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  109 bits (275), Expect = 3e-26
 Identities = 56/301 (18%), Positives = 106/301 (35%), Gaps = 45/301 (14%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
            +G G FG+V +  + +     A+K+   +  +       E+   + L    +V L G  
Sbjct: 65  RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAV 119

Query: 579 DEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
            E   + +  E +  G+L   +        D       Q L        GL YLH    R
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQAL-------EGLEYLH---TR 169

Query: 634 GIIHRDVKTTNILLDEN-FVAKMSDFGLSK--TGPSMEHTHVST-AVKGSFGYLDPEYFW 689
            I+H DVK  N+LL  +   A + DFG +       +  + ++   + G+  ++ PE   
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 229

Query: 690 RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK 749
            +    K D++S   ++  ++                     +  +       I    + 
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNGC----HPWT----QYFRGPLCLKIASEPPPI--REIP 279

Query: 750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH----LEYVLQLHEAWMRT--DDRQN 803
            + +P       +  ++ L  E  +R +  E+       L+ V  L   W     + R N
Sbjct: 280 PSCAPL----TAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKEPRGN 335

Query: 804 S 804
           S
Sbjct: 336 S 336

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  108 bits (271), Expect = 5e-26
 Identities = 67/281 (23%), Positives = 116/281 (41%), Gaps = 55/281 (19%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           IG G  G V+   ++      AI++ N Q +        EI ++ + ++ ++V+ +    
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDL---PPLTWKQRLDACIGAARGLHYLHTGAERGII 636
             +E+ +V EY+A G+L      +D+     +   Q    C    + L +LH      +I
Sbjct: 88  VGDELWVVMEYLAGGSL------TDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVI 138

Query: 637 HRDVKTTNILLDENFVAKMSDFG----LSKTGPSMEHTHVST----AVKGSFGYLDPEYF 688
           HRD+K+ NILL  +   K++DFG    ++    S   T V T    A         PE  
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMA---------PEVV 188

Query: 689 WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID--- 745
            R+    K D++S G++  E+        P  P    N     +     R+L  I     
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEM----IEGEP--PYLNEN----PL-----RALYLIATNGT 233

Query: 746 PHLKG--NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
           P L+     S      F +   +CL+ + + R +  E+L H
Sbjct: 234 PELQNPEKLSAI----FRDFLNRCLEMDVEKRGSAKELLQH 270

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  106 bits (268), Expect = 8e-26
 Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 28/204 (13%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK---RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           +G G F  V++   I      AIK   +        +   + E+++  +L+H  ++ L  
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGA------ARGLHYLHTG 630
           + ++ N + LV E   NG +  +L           +                G+ YLH  
Sbjct: 79  YFEDSNYVYLVLEMCHNGEMNRYL-------KNRVKPFSENEARHFMHQIITGMLYLH-- 129

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLS---KTGPSMEHTHVSTAVKGSFGYLDPEY 687
              GI+HRD+  +N+LL  N   K++DFGL+   K      +T     + G+  Y+ PE 
Sbjct: 130 -SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-----LCGTPNYISPEI 183

Query: 688 FWRQQLTEKSDVYSFGVVLFEVVC 711
             R     +SDV+S G + + ++ 
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLI 207

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  108 bits (270), Expect = 2e-25
 Identities = 37/313 (11%), Positives = 85/313 (27%), Gaps = 80/313 (25%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIK----------------------------RANPQSE 550
           ++G        +  + E      +                               N +  
Sbjct: 80  VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 139

Query: 551 QGLAEFETEIEMLSKLRHRHLVSLIG-FCDEQNEMILVYEYMANGTLRSHL-----FGSD 604
           +    F    +++   + + ++ +     D                L++         S 
Sbjct: 140 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSST 199

Query: 605 LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG 664
              L    RL   +   R L  LH     G++H  ++  +I+LD+     ++ F      
Sbjct: 200 HKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLV-- 254

Query: 665 PSMEHTHVSTAVKGSFGYLDPEYFWRQQL-----------TEKSDVYSFGVVLFEVVCAR 713
                         S G+  PE   R+             T   D ++ G+V++ + CA 
Sbjct: 255 ----RDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD 310

Query: 714 AVINPTLPKDQINLADWAMKWQKQRS--LKSIIDPHLKGNYSPESLEKFGEIAEKCLDDE 771
               P      +  ++W  +  K     +++++                    E  L   
Sbjct: 311 L---PITKDAALGGSEWIFRSCKNIPQPVRALL--------------------EGFLRYP 347

Query: 772 GKNRPTMGEVLWH 784
            ++R    + +  
Sbjct: 348 KEDRLLPLQAMET 360

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  108 bits (271), Expect = 3e-25
 Identities = 37/309 (11%), Positives = 85/309 (27%), Gaps = 67/309 (21%)

Query: 520 MIGVGGFGKVFKGE-IEDCTLAAIK---RANPQSEQGLAEFETEIEMLSKLR-------- 567
           ++G        +    E      +             + + + E+  L  LR        
Sbjct: 85  VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 144

Query: 568 --------------HRHLVSLIGFCDEQNEMILVYEYM----ANGTLRSHL-----FGSD 604
                               +I    ++ +M ++  +         L++         S 
Sbjct: 145 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSST 204

Query: 605 LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG 664
              L    RL   +   R L  LH     G++H  ++  +I+LD+     ++ F      
Sbjct: 205 HKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRD 261

Query: 665 PSMEHTHVSTAVKGSFGYLDPEYFWRQQ-----LTEKSDVYSFGVVLFEVVCARAVINPT 719
            +   + +                   Q     +T   D ++ G+ ++ + CA       
Sbjct: 262 GASAVSPIGRGF-APPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD------ 314

Query: 720 LPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS-PESLEKFGEIAEKCLDDEGKNRPTM 778
           LP                 +     +   +   + P+ +     + E  L    ++R   
Sbjct: 315 LPNT-------------DDAALGGSEWIFRSCKNIPQPVR---ALLEGFLRYPKEDRLLP 358

Query: 779 GEVLWHLEY 787
            + +   EY
Sbjct: 359 LQAMETPEY 367

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  105 bits (264), Expect = 5e-25
 Identities = 69/282 (24%), Positives = 117/282 (41%), Gaps = 39/282 (13%)

Query: 512 TNNFDESLMIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRH 570
              FD    +G G +G V+K    E   + AIK+   +S+  L E   EI ++ +    H
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPH 85

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
           +V   G   +  ++ +V EY   G++   +       LT  +         +GL YLH  
Sbjct: 86  VVKYYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLH-- 142

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLS-KTGPSME--HTHVSTAVKGSFGYLDPEY 687
                IHRD+K  NILL+    AK++DFG++ +   +M   +T + T       ++ PE 
Sbjct: 143 -FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF-----WMAPEV 196

Query: 688 FWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID-- 745
                    +D++S G+   E+    A   P  P   I+     M     R++  I    
Sbjct: 197 IQEIGYNCVADIWSLGITAIEM----AEGKP--PYADIH----PM-----RAIFMIPTNP 241

Query: 746 -PHLKG--NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
            P  +    +S      F +  ++CL    + R T  ++L H
Sbjct: 242 PPTFRKPELWSDN----FTDFVKQCLVKSPEQRATATQLLQH 279

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  105 bits (265), Expect = 5e-25
 Identities = 75/285 (26%), Positives = 118/285 (41%), Gaps = 50/285 (17%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIG-- 576
           +G G +G+V+KG  ++   LAAIK  +   ++   E + EI ML K   HR++ +  G  
Sbjct: 32  VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGAF 90

Query: 577 ----FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
                    +++ LV E+   G++   +  +    L  +     C    RGL +LH   +
Sbjct: 91  IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---Q 147

Query: 633 RGIIHRDVKTTNILLDENFVAKMSDFGLS---KTGPSMEHTHVSTA------VKGSFGYL 683
             +IHRD+K  N+LL EN   K+ DFG+S          +T + T       V       
Sbjct: 148 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENP 207

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI 743
           D  Y        KSD++S G+   E+    A   P  P   ++     M     R+L  I
Sbjct: 208 DATY------DFKSDLWSLGITAIEM----AEGAP--PLCDMH----PM-----RALFLI 246

Query: 744 ID---PHLKG-NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                P LK   +S +    F    E CL      RP   +++ H
Sbjct: 247 PRNPAPRLKSKKWSKK----FQSFIESCLVKNHSQRPATEQLMKH 287

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  105 bits (263), Expect = 7e-25
 Identities = 72/318 (22%), Positives = 121/318 (38%), Gaps = 81/318 (25%)

Query: 520 MIGVGGFGKVFKGE-IEDCTLAAIKRAN------PQSEQGLAEFETEIEMLSKLR----H 568
           ++G GGFG VF G  + D    AIK                     E+ +L K+     H
Sbjct: 38  LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97

Query: 569 RHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR------ 622
             ++ L+ + + Q   +LV E          LF  D   +T K  L    G +R      
Sbjct: 98  PGVIRLLDWFETQEGFMLVLERPLPA---QDLF--DY--ITEKGPLGE--GPSRCFFGQV 148

Query: 623 --GLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGS 679
              + + H+   RG++HRD+K  NIL+D     AK+ DFG       +     +    G+
Sbjct: 149 VAAIQHCHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSGAL---LHDEPYTDFD-GT 201

Query: 680 FGYLDPEYFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR 738
             Y  PE+  R Q     + V+S G++L+++VC        +P ++              
Sbjct: 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD------IPFERD------------- 242

Query: 739 SLKSIIDPHLKGNY------SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH 792
             + I    L+         SP+       +  +CL  +  +RP++ E+L          
Sbjct: 243 --QEI----LEAELHFPAHVSPDCC----ALIRRCLAPKPSSRPSLEEILLD-------- 284

Query: 793 EAWMRTDDRQNSFSSSQA 810
             WM+T       + S+ 
Sbjct: 285 -PWMQTPAEDVPLNPSKG 301

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  106 bits (266), Expect = 9e-25
 Identities = 52/280 (18%), Positives = 112/280 (40%), Gaps = 49/280 (17%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           +G G FG V +  E     +   K  N          + EI ++++L H  L++L    +
Sbjct: 59  LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118

Query: 580 EQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           ++ EM+L+ E+++ G L        +           +Q  +       GL ++H   E 
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACE-------GLKHMH---EH 168

Query: 634 GIIHRDVKTTNILL--DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ 691
            I+H D+K  NI+    +    K+ DFGL+     +    +      +  +  PE   R+
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATK---LNPDEIVKVTTATAEFAAPEIVDRE 225

Query: 692 QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN 751
            +   +D+++ GV+ + ++     ++P   +D               +L+++     + +
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSG---LSPFAGEDD------------LETLQNV----KRCD 266

Query: 752 YSPESLEKFGEIAE-------KCLDDEGKNRPTMGEVLWH 784
           +  +  + F  ++          L  E + R T+ + L H
Sbjct: 267 WEFDE-DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  106 bits (267), Expect = 1e-24
 Identities = 83/316 (26%), Positives = 122/316 (38%), Gaps = 71/316 (22%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK--------RANPQSEQGLAEFETEIEMLSKLRHRHL 571
           +G G  G+V    E + C   AI+          + +        ETEIE+L KL H  +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202

Query: 572 VSLIGFCDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLH 625
           + +  F D ++   +V E M  G L         L  +        Q L A       + 
Sbjct: 203 IKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLA-------VQ 253

Query: 626 YLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           YLH   E GIIHRD+K  N+LL   +E+ + K++DFG SK    +  T +   + G+  Y
Sbjct: 254 YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTY 307

Query: 683 LDPE---YFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS 739
           L PE              D +S GV+LF  +          P  +            Q S
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG------YPPFSEHR---------TQVS 352

Query: 740 LKSIIDPHLKGNYSPESLEKFGEIAE-------KCLDDEGKNRPTMGEVLWHLEYVLQLH 792
           LK  I     G Y+    E + E++E       K L  + K R T  E L H        
Sbjct: 353 LKDQI---TSGKYNFIP-EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH-------- 400

Query: 793 EAWMRTDDRQNSFSSS 808
             W++ +D +  F   
Sbjct: 401 -PWLQDEDMKRKFQDL 415

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  104 bits (262), Expect = 1e-24
 Identities = 72/307 (23%), Positives = 118/307 (38%), Gaps = 68/307 (22%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIK-----RANPQSEQGLAEFETEIEMLSKLRHRHLVSL 574
           IG G F KV     I      AIK     + NP S Q L     E+ ++  L H ++V L
Sbjct: 23  IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKL---FREVRIMKILNHPNIVKL 79

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR--------GLHY 626
               + +  + L+ EY + G +  +L            R+      AR         + Y
Sbjct: 80  FEVIETEKTLYLIMEYASGGEVFDYLVA--------HGRMKE--KEARSKFRQIVSAVQY 129

Query: 627 LHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK--TGPSMEHTHVSTAVKGSFGYLD 684
            H   ++ I+HRD+K  N+LLD +   K++DFG S   T              G+  Y  
Sbjct: 130 CH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC-----GAPPYAA 181

Query: 685 PEYFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI 743
           PE F  ++    + DV+S GV+L+ +V         LP D  NL          + L+  
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSGS------LPFDGQNL----------KELRER 225

Query: 744 IDPHLKGNYS-PESLEKFGE-IAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDR 801
           +   L+G Y  P  +    E + ++ L      R T+ +++            W+     
Sbjct: 226 V---LRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD---------RWINAGHE 273

Query: 802 QNSFSSS 808
           ++     
Sbjct: 274 EDELKPF 280

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  104 bits (261), Expect = 2e-24
 Identities = 78/282 (27%), Positives = 114/282 (40%), Gaps = 55/282 (19%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKR---ANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           IG G FG V+   ++ +  + AIK+   +  QS +   +   E+  L KLRH + +   G
Sbjct: 62  IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGII 636
               ++   LV EY         L      PL   +      GA +GL YLH      +I
Sbjct: 122 CYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMI 176

Query: 637 HRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW------- 689
           HRDVK  NILL E  + K+ DFG +    +  ++ V T          P  +W       
Sbjct: 177 HRDVKAGNILLSEPGLVKLGDFGSASIM-APANSFVGT----------P--YWMAPEVIL 223

Query: 690 ---RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID- 745
                Q   K DV+S G+   E+    A   P  P   +N    AM      +L  I   
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIEL----AERKP--PLFNMN----AM-----SALYHIAQN 268

Query: 746 --PHLK-GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
             P L+ G++S      F    + CL    ++RPT   +L H
Sbjct: 269 ESPALQSGHWSEY----FRNFVDSCLQKIPQDRPTSEVLLKH 306

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  103 bits (259), Expect = 2e-24
 Identities = 69/294 (23%), Positives = 109/294 (37%), Gaps = 58/294 (19%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           IG G    V            AIKR N  + +  + E   EI+ +S+  H ++VS     
Sbjct: 23  IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF 82

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD-ACIGAA-----RGLHYLHTGAE 632
             ++E+ LV + ++ G++   +             LD + I         GL YLH   +
Sbjct: 83  VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---K 139

Query: 633 RGIIHRDVKTTNILLDENFVAKMSDFG----LSKTGPSME----HTHVST-------AVK 677
            G IHRDVK  NILL E+   +++DFG    L+  G         T V T        ++
Sbjct: 140 NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 199

Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA---VINPTLPKDQINLADWAM-- 732
              GY             K+D++SFG+   E+    A      P             +  
Sbjct: 200 QVRGY-----------DFKADIWSFGITAIELATGAAPYHKYPPM----------KVLML 238

Query: 733 --KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
             +         + D  +   Y       F ++   CL  + + RPT  E+L H
Sbjct: 239 TLQNDPPSLETGVQDKEMLKKYGKS----FRKMISLCLQKDPEKRPTAAELLRH 288

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  103 bits (260), Expect = 2e-24
 Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 36/208 (17%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK--------RANPQSEQGLAEFETEIEMLSKLRHRHL 571
           +G G  G+V    E + C   AIK          + +        ETEIE+L KL H  +
Sbjct: 18  LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77

Query: 572 VSLIGFCDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLH 625
           + +  F D ++   +V E M  G L         L  +        Q L A       + 
Sbjct: 78  IKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLA-------VQ 128

Query: 626 YLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           YLH   E GIIHRD+K  N+LL   +E+ + K++DFG SK    +  T +   + G+  Y
Sbjct: 129 YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTY 182

Query: 683 LDPE---YFWRQQLTEKSDVYSFGVVLF 707
           L PE              D +S GV+LF
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILF 210

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  103 bits (258), Expect = 4e-24
 Identities = 68/321 (21%), Positives = 126/321 (39%), Gaps = 57/321 (17%)

Query: 484 GSGTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMIGVGGFGKVFKG-EIEDCTLAAI 542
           GS     K +  LT  G+R+     +   N+ +    +G G  G+V+K    +   + A+
Sbjct: 1   GSSGSSGKQTGYLTIGGQRY-----QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAV 55

Query: 543 K--RANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSH 599
           K  R +  +++       +++++ K     ++V   G      ++ +  E M  GT    
Sbjct: 56  KQMRRSG-NKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GT---- 108

Query: 600 LFGSDLPPLTWKQRLD------ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA 653
              ++      +  +         +   + L+YL    + G+IHRDVK +NILLDE    
Sbjct: 109 --CAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQI 164

Query: 654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTE-----KSDVYSFGVVLFE 708
           K+ DFG+S     +          G   Y+ PE       T+     ++DV+S G+ L E
Sbjct: 165 KLCDFGISG---RLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE 221

Query: 709 VVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID---PHLKGN--YSPESLEKFGEI 763
           +    A              +    +     L  ++    P L G+  +S +    F   
Sbjct: 222 L----ATGQFPYK-------NCKTDF---EVLTKVLQEEPPLLPGHMGFSGD----FQSF 263

Query: 764 AEKCLDDEGKNRPTMGEVLWH 784
            + CL  + + RP   ++L H
Sbjct: 264 VKDCLTKDHRKRPKYNKLLEH 284

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  103 bits (259), Expect = 5e-24
 Identities = 65/299 (21%), Positives = 110/299 (36%), Gaps = 49/299 (16%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           +G G  G VFK        + A K      +      +   E+++L +    ++V   G 
Sbjct: 41  LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI-RNQIIRELQVLHECNSPYIVGFYGA 99

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIH 637
                E+ +  E+M  G+L           +  +      I   +GL YL    +  I+H
Sbjct: 100 FYSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMH 155

Query: 638 RDVKTTNILLDENFVAKMSDFGLS-KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEK 696
           RDVK +NIL++     K+ DFG+S +   SM ++ V     G+  Y+ PE       + +
Sbjct: 156 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----GTRSYMSPERLQGTHYSVQ 210

Query: 697 SDVYSFGVVLFEVVCAR--------------------AVINPTLPKDQINLADWAMKWQK 736
           SD++S G+ L E+   R                         T P+ +            
Sbjct: 211 SDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMD 270

Query: 737 QRSLKSIID----------PHL-KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
            R   +I +          P L  G +S E    F +   KCL      R  + +++ H
Sbjct: 271 SRPPMAIFELLDYIVNEPPPKLPSGVFSLE----FQDFVNKCLIKNPAERADLKQLMVH 325

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  102 bits (256), Expect = 7e-24
 Identities = 64/304 (21%), Positives = 109/304 (35%), Gaps = 79/304 (25%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRAN------PQSEQGLAEFETEIEMLSKLRHR--HL 571
           +G GGFG V+ G  + D    AIK                     E+ +L K+      +
Sbjct: 51  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110

Query: 572 VSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR--------G 623
           + L+ + +  +  +L+ E          LF  D   +T +  L      AR         
Sbjct: 111 IRLLDWFERPDSFVLILERPEPV---QDLF--DF--ITERGALQE--ELARSFFWQVLEA 161

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFV-AKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           + + H     G++HRD+K  NIL+D N    K+ DFG       ++ T  +    G+  Y
Sbjct: 162 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVYTDFD-GTRVY 214

Query: 683 LDPEYFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK 741
             PE+    +     + V+S G++L+++VC        +P +                 +
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD------IPFEHD---------------E 253

Query: 742 SIIDPHLKGNY------SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAW 795
            I    ++G        S E       +   CL     +RPT  E+  H          W
Sbjct: 254 EI----IRGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH---------PW 296

Query: 796 MRTD 799
           M+  
Sbjct: 297 MQDV 300

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  105 bits (263), Expect = 7e-24
 Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 28/204 (13%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK---RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           +G G FG+V    +       A+K   +   + +        E+++L +L H +++ L  
Sbjct: 34  LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93

Query: 577 FCDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
           F +++    LV E    G L      R      D   +  +Q L         + Y+H  
Sbjct: 94  FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII-RQVLSG-------ITYMH-- 143

Query: 631 AERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY 687
            +  I+HRD+K  N+LL    ++   ++ DFGLS      E +       G+  Y+ PE 
Sbjct: 144 -KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST---HFEASKKMKDKIGTAYYIAPEV 199

Query: 688 FWRQQLTEKSDVYSFGVVLFEVVC 711
                  EK DV+S GV+L+ ++ 
Sbjct: 200 L-HGTYDEKCDVWSTGVILYILLS 222

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  100 bits (251), Expect = 2e-23
 Identities = 45/201 (22%), Positives = 82/201 (40%), Gaps = 25/201 (12%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           IG G +G+V    +       A K+      + +  F+ EIE++  L H +++ L    +
Sbjct: 17  IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 76

Query: 580 EQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           +  ++ LV E    G L      +     SD   +  K  L A       + Y H   + 
Sbjct: 77  DNTDIYLVMELCTGGELFERVVHKRVFRESDAARIM-KDVLSA-------VAYCH---KL 125

Query: 634 GIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
            + HRD+K  N L      +   K+ DFGL+      +   +     G+  Y+ P+    
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR---FKPGKMMRTKVGTPYYVSPQVL-E 181

Query: 691 QQLTEKSDVYSFGVVLFEVVC 711
                + D +S GV+++ ++C
Sbjct: 182 GLYGPECDEWSAGVMMYVLLC 202

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  101 bits (253), Expect = 2e-23
 Identities = 40/252 (15%), Positives = 85/252 (33%), Gaps = 42/252 (16%)

Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHL---FGSDL 605
           S   +     +I  +     ++ V  +     +  + +  +      L+  +      + 
Sbjct: 101 SPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160

Query: 606 PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK--- 662
                   +   I  A  + +LH    +G++HRD+K +NI    + V K+ DFGL     
Sbjct: 161 REHGVCLHIFIQI--AEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD 215

Query: 663 -------TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
                      M      T   G+  Y+ PE       + K D++S G++LFE++ +   
Sbjct: 216 QDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS--- 272

Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAE---KCLDDEG 772
                           M  ++ R +  +        +     +K+ +        L    
Sbjct: 273 ------------FSTQM--ERVRIITDVR----NLKFPLLFTQKYPQEHMMVQDMLSPSP 314

Query: 773 KNRPTMGEVLWH 784
             RP   +++ +
Sbjct: 315 TERPEATDIIEN 326

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 45.3 bits (107), Expect = 5e-05
 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 2/81 (2%)

Query: 513 NNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKR-ANPQSEQGLAEFETEIEMLSKLRHRH 570
            +F+    +G GGFG VF+ +   D    AIKR   P  E    +   E++ L+KL H  
Sbjct: 6   TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65

Query: 571 LVSLIGFCDEQNEMILVYEYM 591
           +V       E        E  
Sbjct: 66  IVRYFNAWLETPPEKWQEEMD 86

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =   99 bits (250), Expect = 3e-23
 Identities = 68/307 (22%), Positives = 128/307 (41%), Gaps = 67/307 (21%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK------RANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
           +G G F  V K  +       A K       ++ +      E E E+ +L ++RH ++++
Sbjct: 13  LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72

Query: 574 LIGFCDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYL 627
           L    + + +++L+ E ++ G L      +  L   +      KQ LD       G+HYL
Sbjct: 73  LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFL-KQILD-------GVHYL 124

Query: 628 HTGAERGIIHRDVKTTNILL----DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           H    + I H D+K  NI+L      N   K+ DFG++     +E  +    + G+  ++
Sbjct: 125 H---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK---IEAGNEFKNIFGTPEFV 178

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI 743
            PE    + L  ++D++S GV+ + ++      +P L + +            Q +L +I
Sbjct: 179 APEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGETK------------QETLTNI 223

Query: 744 IDPHLKGNYSPESLEKFGEIAE-------KCLDDEGKNRPTMGEVLWHLEYVLQLHEAWM 796
                  NY  +  E F   +E       + L  + K R T+ + L H         +W+
Sbjct: 224 ----SAVNYDFDE-EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH---------SWI 269

Query: 797 RTDDRQN 803
           +   R+N
Sbjct: 270 KAIRRRN 276

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 99.6 bits (249), Expect = 3e-23
 Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 14/198 (7%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRAN-PQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           +G G FG V    E        IK  N  +S+  + + E EIE+L  L H +++ +    
Sbjct: 30  LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89

Query: 579 DEQNEMILVYEYMANGTL--RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGII 636
           ++ + M +V E    G L  R     +    L+     +        L Y H    + ++
Sbjct: 90  EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVV 146

Query: 637 HRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL 693
           H+D+K  NIL      +   K+ DFGL++     +    ST   G+  Y+ PE F ++ +
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAEL---FKSDEHSTNAAGTALYMAPEVF-KRDV 202

Query: 694 TEKSDVYSFGVVLFEVVC 711
           T K D++S GVV++ ++ 
Sbjct: 203 TFKCDIWSAGVVMYFLLT 220

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  100 bits (252), Expect = 3e-23
 Identities = 51/212 (24%), Positives = 84/212 (39%), Gaps = 39/212 (18%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIK--------RANPQSEQGLAEFETEIEMLSKLRHRHL 571
           +G G FG V+     E      +K              +  L +   EI +LS++ H ++
Sbjct: 32  LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91

Query: 572 VSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR--------G 623
           + ++   + Q    LV E   +G     LF      +    RLD     A          
Sbjct: 92  IKVLDIFENQGFFQLVMEKHGSG---LDLF--AF--IDRHPRLDE--PLASYIFRQLVSA 142

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS---KTGPSMEHTHVSTAVKGSF 680
           + YL     + IIHRD+K  NI++ E+F  K+ DFG +   + G    +T       G+ 
Sbjct: 143 VGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLF-YTFC-----GTI 193

Query: 681 GYLDPEYFWRQQLT-EKSDVYSFGVVLFEVVC 711
            Y  PE          + +++S GV L+ +V 
Sbjct: 194 EYCAPEVLMGNPYRGPELEMWSLGVTLYTLVF 225

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  101 bits (253), Expect = 4e-23
 Identities = 69/311 (22%), Positives = 126/311 (40%), Gaps = 60/311 (19%)

Query: 514 NFDESLMIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLV 572
              ++ ++G G FG+V K  E       A K    +  +   E + EI ++++L H +L+
Sbjct: 90  TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149

Query: 573 SLIGFCDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHY 626
            L    + +N+++LV EY+  G L       S+        L  KQ  +       G+ +
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICE-------GIRH 202

Query: 627 LHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           +H   +  I+H D+K  NIL    D   + K+ DFGL++     +         G+  +L
Sbjct: 203 MH---QMYILHLDLKPENILCVNRDAKQI-KIIDFGLARR---YKPREKLKVNFGTPEFL 255

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI 743
            PE      ++  +D++S GV+ + ++     ++P L  +               +L +I
Sbjct: 256 APEVVNYDFVSFPTDMWSVGVIAYMLLSG---LSPFLGDND------------AETLNNI 300

Query: 744 IDPHLKGNYSPESLEKFGEIAE-------KCLDDEGKNRPTMGEVLWHLEYVLQLHEAWM 796
               L   +  E  E+F +I+E       K L  E   R +  E L H          W+
Sbjct: 301 ----LACRWDLED-EEFQDISEEAKEFISKLLIKEKSWRISASEALKH---------PWL 346

Query: 797 RTDDRQNSFSS 807
                 +  S+
Sbjct: 347 SDHKLHSRLSA 357

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  103 bits (258), Expect = 4e-23
 Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 15/197 (7%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           +G G +G+V    +       AIK  R    S    ++   E+ +L  L H +++ L  F
Sbjct: 45  LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIH 637
            +++    LV E    G L   +                      G+ YLH   +  I+H
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLH---KHNIVH 159

Query: 638 RDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
           RD+K  N+LL   +++ + K+ DFGLS      E+        G+  Y+ PE   R++  
Sbjct: 160 RDLKPENLLLESKEKDALIKIVDFGLSA---VFENQKKMKERLGTAYYIAPEVL-RKKYD 215

Query: 695 EKSDVYSFGVVLFEVVC 711
           EK DV+S GV+LF ++ 
Sbjct: 216 EKCDVWSIGVILFILLA 232

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  103 bits (258), Expect = 4e-23
 Identities = 61/302 (20%), Positives = 116/302 (38%), Gaps = 62/302 (20%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           +G G FG V +  E       A K      E        EI+ +S LRH  LV+L    +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224

Query: 580 EQNEMILVYEYMANGTL-------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
           + NEM+++YE+M+ G L        + +   +      +Q          GL ++H   E
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYM-RQVCK-------GLCHMH---E 273

Query: 633 RGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW 689
              +H D+K  NI+      N + K+ DFGL+     ++         G+  +  PE   
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNEL-KLIDFGLTAH---LDPKQSVKVTTGTAEFAAPEVAE 329

Query: 690 RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK 749
            + +   +D++S GV+ + ++     ++P   ++               +L+++      
Sbjct: 330 GKPVGYYTDMWSVGVLSYILLSG---LSPFGGEND------------DETLRNV----KS 370

Query: 750 GNYSPESLEKFGEIAE-------KCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQ 802
            +++ +    F  I+E       K L  +   R T+ + L H          W+   +  
Sbjct: 371 CDWNMDD-SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH---------PWLTPGNAP 420

Query: 803 NS 804
             
Sbjct: 421 GR 422

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 99.3 bits (248), Expect = 6e-23
 Identities = 45/210 (21%), Positives = 85/210 (40%), Gaps = 37/210 (17%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK---------RANPQSEQGLAEFETEIEMLSKL-RHR 569
           +G G    V +      C   A+K          +  + ++       E+++L K+  H 
Sbjct: 25  LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84

Query: 570 HLVSLIGFCDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARG 623
           +++ L    +      LV++ M  G L      +  L   +   +  +  L+        
Sbjct: 85  NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM-RALLEV------- 136

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           +  LH   +  I+HRD+K  NILLD++   K++DFG S     ++       V G+  YL
Sbjct: 137 ICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ---LDPGEKLREVCGTPSYL 190

Query: 684 DPE------YFWRQQLTEKSDVYSFGVVLF 707
            PE              ++ D++S GV+++
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMY 220

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  102 bits (255), Expect = 7e-23
 Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 26/208 (12%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK-------------RANPQSEQGLAEFETEIEMLSKL 566
           +G G +G+V    E    +  AIK               N   E+   E   EI +L  L
Sbjct: 44  LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103

Query: 567 RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHY 626
            H +++ L    +++    LV E+   G L   +              +       G+ Y
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICY 161

Query: 627 LHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           LH   +  I+HRD+K  NILL   +     K+ DFGLS         +      G+  Y+
Sbjct: 162 LH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS---FFSKDYKLRDRLGTAYYI 215

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
            PE   +++  EK DV+S GV+++ ++C
Sbjct: 216 APEVL-KKKYNEKCDVWSCGVIMYILLC 242

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 99.6 bits (249), Expect = 8e-23
 Identities = 68/327 (20%), Positives = 128/327 (39%), Gaps = 73/327 (22%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK------RANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
           +G G F  V K  E       A K        + +      + E E+ +L +++H ++++
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78

Query: 574 LIGFCDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYL 627
           L    + + ++IL+ E +A G L      +  L   +      KQ L+        ++YL
Sbjct: 79  LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL-KQILNG-------VYYL 130

Query: 628 HTGAERGIIHRDVKTTNILL----DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           H      I H D+K  NI+L          K+ DFGL+     ++  +    + G+  ++
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFV 184

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI 743
            PE    + L  ++D++S GV+ + ++      +P L   +            Q +L ++
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTK------------QETLANV 229

Query: 744 IDPHLKGNYSPESLEKFGEIAE-------KCLDDEGKNRPTMGEVLWHLEYVLQLHEAWM 796
                  NY  E  E F   +        + L  + K R T+ + L H          W+
Sbjct: 230 ----SAVNYEFED-EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH---------PWI 275

Query: 797 RTDD------RQNSFSSSQALGEFAER 817
           +  D      R+ S  + +   +FA R
Sbjct: 276 KPKDTQQALSRKASAVNMEKFKKFAAR 302

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =   99 bits (249), Expect = 8e-23
 Identities = 54/242 (22%), Positives = 92/242 (38%), Gaps = 55/242 (22%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK-----RANPQSEQGLAEFETEIEMLSKLRHRHLVSL 574
           IG G +G V    E +   + AIK     +    + + +   +TE+ ++ KL H ++  L
Sbjct: 34  IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93

Query: 575 IGFCDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIG--------- 619
               +++  + LV E    G L                    K ++  C           
Sbjct: 94  YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153

Query: 620 ----------------AAR-------GLHYLHTGAERGIIHRDVKTTNILL--DENFVAK 654
                            +         LHYLH    +GI HRD+K  N L   +++F  K
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIK 210

Query: 655 MSDFGLSK---TGPSMEHTHVSTAVKGSFGYLDPE--YFWRQQLTEKSDVYSFGVVLFEV 709
           + DFGLSK      + E+  ++T   G+  ++ PE      +    K D +S GV+L  +
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKA-GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLL 269

Query: 710 VC 711
           + 
Sbjct: 270 LM 271

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  100 bits (250), Expect = 8e-23
 Identities = 68/315 (21%), Positives = 124/315 (39%), Gaps = 67/315 (21%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK------RANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
           +G G F  V K  E       A K          +      E E E+ +L ++ H ++++
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79

Query: 574 LIGFCDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYL 627
           L    + + +++L+ E ++ G L      +  L   +      KQ LD       G++YL
Sbjct: 80  LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI-KQILD-------GVNYL 131

Query: 628 HTGAERGIIHRDVKTTNILL----DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           H    + I H D+K  NI+L          K+ DFGL+     +E       + G+  ++
Sbjct: 132 H---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFGTPEFV 185

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI 743
            PE    + L  ++D++S GV+ + ++      +P L   +            Q +L +I
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTK------------QETLANI 230

Query: 744 IDPHLKGNYSPESLEKFGEIAE-------KCLDDEGKNRPTMGEVLWHLEYVLQLHEAWM 796
                  +Y  +  E F + +E       K L  E + R T+ E L H          W+
Sbjct: 231 ----TAVSYDFDE-EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH---------PWI 276

Query: 797 RTDDRQNSFSSSQAL 811
              D Q +    +++
Sbjct: 277 TPVDTQQAMVRRESV 291

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 98.9 bits (247), Expect = 1e-22
 Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 31/204 (15%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK------RANPQSEQGLAEFETEIEMLSKLRHRHLVS 573
           +G G F  V K  E       A K          +      E E E+ +L ++ H ++++
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79

Query: 574 LIGFCDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYL 627
           L    + + +++L+ E ++ G L      +  L   +      KQ LD       G++YL
Sbjct: 80  LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI-KQILD-------GVNYL 131

Query: 628 HTGAERGIIHRDVKTTNILL----DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL 683
           H    + I H D+K  NI+L          K+ DFGL+     +E       + G+  ++
Sbjct: 132 H---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE---IEDGVEFKNIFGTPEFV 185

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLF 707
            PE    + L  ++D++S GV+ +
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITY 209

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 97.6 bits (244), Expect = 1e-22
 Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 26/199 (13%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRAN--PQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           +G G F  V +          A K  N    S +   + E E  +  KL+H ++V L   
Sbjct: 14  LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73

Query: 578 CDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
             E++   LV++ +  G L      R     +D      +Q L++       + Y H   
Sbjct: 74  IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI-QQILES-------IAYCH--- 122

Query: 632 ERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
             GI+HR++K  N+LL    +    K++DFGL+     +  +       G+ GYL PE  
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE---VNDSEAWHGFAGTPGYLSPEVL 179

Query: 689 WRQQLTEKSDVYSFGVVLF 707
            +   ++  D+++ GV+L+
Sbjct: 180 KKDPYSKPVDIWACGVILY 198

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 98.5 bits (246), Expect = 2e-22
 Identities = 65/280 (23%), Positives = 110/280 (39%), Gaps = 39/280 (13%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQS-EQGLAEFETEIE-MLSKLRHRHLVSLIGF 577
           IG G +G V K        + A+KR      E+   +   +++ ++      ++V   G 
Sbjct: 30  IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA--RGLHYLHTGAERGI 635
              + +  +  E M+    + + +   +      + +   I  A  + L++L       I
Sbjct: 90  LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE--NLKI 147

Query: 636 IHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPE----YFWRQ 691
           IHRD+K +NILLD +   K+ DFG+S     +  +   T   G   Y+ PE       RQ
Sbjct: 148 IHRDIKPSNILLDRSGNIKLCDFGISGQ---LVDSIAKTRDAGCRPYMAPERIDPSASRQ 204

Query: 692 QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID---PHL 748
               +SDV+S G+ L+E+    A      PK        ++  Q    L  ++    P L
Sbjct: 205 GYDVRSDVWSLGITLYEL----ATGRFPYPKWN------SVFDQ----LTQVVKGDPPQL 250

Query: 749 K----GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                  +SP     F      CL  +   RP   E+L H
Sbjct: 251 SNSEEREFSPS----FINFVNLCLTKDESKRPKYKELLKH 286

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 97.7 bits (244), Expect = 2e-22
 Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 35/226 (15%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIK----RANPQSEQGLAEFETEIEMLSKLRHRHLVSL- 574
           +G G +GKV +    E     A+K    +   +   G A  + EI++L +LRH++++ L 
Sbjct: 13  LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72

Query: 575 -IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR--------GLH 625
            + + +E+ +M +V EY   G     +   D  P   ++R    +  A         GL 
Sbjct: 73  DVLYNEEKQKMYMVMEYCVCGMQE--ML--DSVP---EKRFP--VCQAHGYFCQLIDGLE 123

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDP 685
           YLH    +GI+H+D+K  N+LL      K+S  G+++              +GS  +  P
Sbjct: 124 YLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPP 180

Query: 686 EYFWRQQLTE--KSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD 729
           E           K D++S GV L+ +           P +  N+  
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTLYNITTGL------YPFEGDNIYK 220

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 98.6 bits (246), Expect = 2e-22
 Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 26/197 (13%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           +G G    V++  +       A+K      ++      TEI +L +L H +++ L    +
Sbjct: 61  LGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIKLKEIFE 118

Query: 580 EQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
              E+ LV E +  G L      + +    D      KQ L+A       + YLH   E 
Sbjct: 119 TPTEISLVLELVTGGELFDRIVEKGYYSERDAADAV-KQILEA-------VAYLH---EN 167

Query: 634 GIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
           GI+HRD+K  N+L      +   K++DFGLSK    +EH  +   V G+ GY  PE    
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI---VEHQVLMKTVCGTPGYCAPEILRG 224

Query: 691 QQLTEKSDVYSFGVVLF 707
                + D++S G++ +
Sbjct: 225 CAYGPEVDMWSVGIITY 241

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 98.6 bits (246), Expect = 2e-22
 Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 36/209 (17%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK--------RANPQSEQGLAEFETEIEMLSKLR-HRH 570
           IG G    V +          A+K         +  Q E+       E  +L ++  H H
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGL 624
           +++LI   +  + M LV++ M  G L      +  L   +   +  +  L+A       +
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIM-RSLLEA-------V 213

Query: 625 HYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLD 684
            +LH      I+HRD+K  NILLD+N   ++SDFG S     +E       + G+ GYL 
Sbjct: 214 SFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCH---LEPGEKLRELCGTPGYLA 267

Query: 685 PE------YFWRQQLTEKSDVYSFGVVLF 707
           PE              ++ D+++ GV+LF
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILF 296

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 98.1 bits (245), Expect = 3e-22
 Identities = 66/315 (20%), Positives = 111/315 (35%), Gaps = 67/315 (21%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK-----RANPQSEQGLAEFETEIEMLSKLRHRHLVSL 574
           IG G F  V +    E     A+K     +          + + E  +   L+H H+V L
Sbjct: 32  IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91

Query: 575 IGFCDEQNEMILVYEYMANGTL--RSHLFGSDLPPLT-------WKQRLDACIGAARGLH 625
           +        + +V+E+M    L              +        +Q L+A       L 
Sbjct: 92  LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA-------LR 144

Query: 626 YLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
           Y H   +  IIHRDVK   +LL   + +   K+  FG++      E   V+    G+  +
Sbjct: 145 YCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--ESGLVAGGRVGTPHF 199

Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS 742
           + PE   R+   +  DV+  GV+LF ++       P           +     K+R  + 
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSGCL---PF----------YG---TKERLFEG 243

Query: 743 IIDPHLKGNYSPESLEKFGEIAE-------KCLDDEGKNRPTMGEVLWHLEYVLQLHEAW 795
           I    +KG Y      ++  I+E       + L  +   R T+ E L H          W
Sbjct: 244 I----IKGKYKMNP-RQWSHISESAKDLVRRMLMLDPAERITVYEALNH---------PW 289

Query: 796 MRTDDRQNSFSSSQA 810
           ++  DR         
Sbjct: 290 LKERDRYAYKIHLPE 304

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 96.5 bits (241), Expect = 3e-22
 Identities = 61/220 (27%), Positives = 96/220 (43%), Gaps = 35/220 (15%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIK---RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           +GVG FGKV  GE        A+K   R   +S   + + + EI+ L   RH H++ L  
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR--------GLHYLH 628
                 +  +V EY++ G L  ++            R++     AR         + Y H
Sbjct: 79  VISTPTDFFMVMEYVSGGELFDYI--------CKHGRVE--EMEARRLFQQILSAVDYCH 128

Query: 629 TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
                 ++HRD+K  N+LLD +  AK++DFGLS      E    S    GS  Y  PE  
Sbjct: 129 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVI 182

Query: 689 WRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
             +     + D++S GV+L+ ++C        LP D  ++
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGT------LPFDDEHV 216

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 96.6 bits (241), Expect = 4e-22
 Identities = 59/276 (21%), Positives = 111/276 (40%), Gaps = 35/276 (12%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQS-EQGLAEFETEIEM-LSKLRHRHLVSLIGF 577
           +G G +G V K   +    + A+KR       Q       ++++ +  +     V+  G 
Sbjct: 15  LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLP-PLTWKQRLDACIGAARGLHYLHTGAERGII 636
              + ++ +  E M     + +    D    +         +   + L +LH+  +  +I
Sbjct: 75  LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSVI 132

Query: 637 HRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPE----YFWRQQ 692
           HRDVK +N+L++     KM DFG+S     +          G   Y+ PE       ++ 
Sbjct: 133 HRDVKPSNVLINALGQVKMCDFGISGY---LVDDVAKDIDAGCKPYMAPERINPELNQKG 189

Query: 693 LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID---PHLK 749
            + KSD++S G+ + E+    A++    P        W   +   + LK +++   P L 
Sbjct: 190 YSVKSDIWSLGITMIEL----AILRF--P-----YDSWGTPF---QQLKQVVEEPSPQLP 235

Query: 750 -GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
              +S E    F +   +CL    K RPT  E++ H
Sbjct: 236 ADKFSAE----FVDFTSQCLKKNSKERPTYPELMQH 267

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 97.8 bits (244), Expect = 5e-22
 Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 26/199 (13%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRAN--PQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           +G G F  V +          A K  N    S +   + E E  +  KL+H ++V L   
Sbjct: 37  LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96

Query: 578 CDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
             E++   LV++ +  G L      R     +D      +Q L++       + Y H   
Sbjct: 97  IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI-QQILES-------IAYCH--- 145

Query: 632 ERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
             GI+HR++K  N+LL    +    K++DFGL+     +  +       G+ GYL PE  
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE---VNDSEAWHGFAGTPGYLSPEVL 202

Query: 689 WRQQLTEKSDVYSFGVVLF 707
            +   ++  D+++ GV+L+
Sbjct: 203 KKDPYSKPVDIWACGVILY 221

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 95.7 bits (239), Expect = 6e-22
 Identities = 54/203 (26%), Positives = 84/203 (41%), Gaps = 26/203 (12%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAE-FETEIEMLSKLRHRHLVSLIGFC 578
           +G G +G+V            A+K  + +      E  + EI +   L H ++V   G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR--------GLHYLHTG 630
            E N   L  EY + G L   +             +      A+        G+ YLH  
Sbjct: 75  REGNIQYLFLEYCSGGELFDRIEP--------DIGMPE--PDAQRFFHQLMAGVVYLHG- 123

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVKGSFGYLDPEYFW 689
              GI HRD+K  N+LLDE    K+SDFGL+     +     ++    G+  Y+ PE   
Sbjct: 124 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLK 180

Query: 690 RQQLT-EKSDVYSFGVVLFEVVC 711
           R++   E  DV+S G+VL  ++ 
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLA 203

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 99.4 bits (248), Expect = 6e-22
 Identities = 67/312 (21%), Positives = 114/312 (36%), Gaps = 63/312 (20%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           +G G FG+V K  +       A+K         +  +    E+E+L KL H +++ L   
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89

Query: 578 CDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
            ++ +   +V E    G L      R      D   +  KQ           + Y+H   
Sbjct: 90  LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARII-KQVFSG-------ITYMH--- 138

Query: 632 ERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
           +  I+HRD+K  NILL   +++   K+ DFGLS      +         G+  Y+ PE  
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLST---CFQQNTKMKDRIGTAYYIAPEVL 195

Query: 689 WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL 748
            R    EK DV+S GV+L+ ++       P           +       ++   I+    
Sbjct: 196 -RGTYDEKCDVWSAGVILYILLSGTP---PF----------YG------KNEYDILKRVE 235

Query: 749 KGNYSPESLEKFGEIAE-------KCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDR 801
            G Y+ +   ++  I++       K L      R T  + L H          W++    
Sbjct: 236 TGKYAFDL-PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH---------PWIQKYSS 285

Query: 802 QNSFSSSQALGE 813
           +    S     E
Sbjct: 286 ETPTISDLPSLE 297

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 95.4 bits (238), Expect = 9e-22
 Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 29/200 (14%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK---RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           +G G FG+V K  +       A+K   +A+ +++   +    E+E+L KL H +++ L  
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLKKLDHPNIMKLFE 88

Query: 577 FCDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
             ++ +   +V E    G L      R      D   +  KQ           + Y+H  
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARII-KQVFSG-------ITYMH-- 138

Query: 631 AERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY 687
            +  I+HRD+K  NILL   +++   K+ DFGLS      +         G+  Y+ PE 
Sbjct: 139 -KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC---FQQNTKMKDRIGTAYYIAPEV 194

Query: 688 FWRQQLTEKSDVYSFGVVLF 707
             R    EK DV+S GV+L+
Sbjct: 195 L-RGTYDEKCDVWSAGVILY 213

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 97.0 bits (242), Expect = 1e-21
 Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 39/224 (17%)

Query: 509 RVATNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFE---TEIEMLS 564
            V  ++F+    IG G FGKV   +  +   + A+K  N Q      E      E++++ 
Sbjct: 11  DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQ 70

Query: 565 KLRHRHLVSLIG-FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD-------- 615
            L H  LV+L   F DE++ M +V + +  G LR HL           Q+          
Sbjct: 71  GLEHPFLVNLWYSFQDEED-MFMVVDLLLGGDLRYHL-----------QQNVHFKEETVK 118

Query: 616 ---ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                +  A  L YL     + IIHRD+K  NILLDE+    ++DF ++     +     
Sbjct: 119 LFICELVMA--LDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAA---MLPRETQ 170

Query: 673 STAVKGSFGYLDPEYFWRQQLTEKS---DVYSFGVVLFEVVCAR 713
            T + G+  Y+ PE F  ++    S   D +S GV  +E++  R
Sbjct: 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 95.4 bits (238), Expect = 1e-21
 Identities = 58/233 (24%), Positives = 95/233 (40%), Gaps = 56/233 (24%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIK---------------RANPQSEQGLAEFET------ 558
           IG G +G V       D T  A+K               R  P+  +             
Sbjct: 21  IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80

Query: 559 -----EIEMLSKLRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWK 611
                EI +L KL H ++V L+   D+ NE  + +V+E +  G     +   ++P     
Sbjct: 81  EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP----VM--EVPT---L 131

Query: 612 QRLDACIGAAR--------GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT 663
           + L      AR        G+ YLH    + IIHRD+K +N+L+ E+   K++DFG+S  
Sbjct: 132 KPLSE--DQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186

Query: 664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT---EKSDVYSFGVVLFEVVCAR 713
                   +S  V G+  ++ PE     +     +  DV++ GV L+  V  +
Sbjct: 187 -FKGSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 95.8 bits (239), Expect = 1e-21
 Identities = 54/203 (26%), Positives = 84/203 (41%), Gaps = 26/203 (12%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAE-FETEIEMLSKLRHRHLVSLIGFC 578
           +G G +G+V            A+K  + +      E  + EI +   L H ++V   G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR--------GLHYLHTG 630
            E N   L  EY + G L   +             +      A+        G+ YLH  
Sbjct: 75  REGNIQYLFLEYCSGGELFDRIEP--------DIGMPE--PDAQRFFHQLMAGVVYLHG- 123

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVKGSFGYLDPEYFW 689
              GI HRD+K  N+LLDE    K+SDFGL+     +     ++    G+  Y+ PE   
Sbjct: 124 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLK 180

Query: 690 RQQLT-EKSDVYSFGVVLFEVVC 711
           R++   E  DV+S G+VL  ++ 
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLA 203

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 95.8 bits (239), Expect = 1e-21
 Identities = 61/220 (27%), Positives = 90/220 (40%), Gaps = 36/220 (16%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIK---RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           +G G FGKV      +     A+K   R   +        E EI  L  LRH H++ L  
Sbjct: 17  LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR--------GLHYLH 628
                 ++++V EY A G L  ++          K+R+       R         + Y H
Sbjct: 77  VITTPTDIVMVIEY-AGGELFDYI--------VEKKRMT--EDEGRRFFQQIICAIEYCH 125

Query: 629 TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
                 I+HRD+K  N+LLD+N   K++DFGLS           S    GS  Y  PE  
Sbjct: 126 R---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVI 179

Query: 689 WRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
             +     + DV+S G+VL+ ++  R      LP D   +
Sbjct: 180 NGKLYAGPEVDVWSCGIVLYVMLVGR------LPFDDEFI 213

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 96.3 bits (240), Expect = 2e-21
 Identities = 70/319 (21%), Positives = 109/319 (34%), Gaps = 63/319 (19%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIK---RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           IG G FG            L A+K   R     E      + EI     LRH ++V    
Sbjct: 28  IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDEN----VQREIINHRSLRHPNIVRFKE 83

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR--------GLHYLH 628
                  + ++ EY + G L   +            R       AR        G+ Y H
Sbjct: 84  VILTPTHLAIIMEYASGGELYERI--------CNAGRFSE--DEARFFFQQLLSGVSYCH 133

Query: 629 TGAERGIIHRDVKTTNILLDENFVA--KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPE 686
                 I HRD+K  N LLD +     K+ DFG SK+  S+ H+   + V G+  Y+ PE
Sbjct: 134 ---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS--SVLHSQPKSTV-GTPAYIAPE 187

Query: 687 YFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
              RQ+   + +DV+S GV L+ ++          P +              R  +  I 
Sbjct: 188 VLLRQEYDGKIADVWSCGVTLYVMLVGA------YPFEDPEEP---------RDYRKTIQ 232

Query: 746 PHLKGNYSPESLEKFGEIAE----KCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDR 801
             L   YS     +          +    +   R ++ E+  H         +W   +  
Sbjct: 233 RILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH---------SWFLKNLP 283

Query: 802 QNSFSSSQALGEFAEREAE 820
            +  + S    +F E E  
Sbjct: 284 ADLMNESNTGSQFQEPEQP 302

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 96.8 bits (241), Expect = 4e-21
 Identities = 62/220 (28%), Positives = 98/220 (44%), Gaps = 35/220 (15%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIK---RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIG 576
           +GVG FGKV  G+        A+K   R   +S   + +   EI+ L   RH H++ L  
Sbjct: 24  LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR--------GLHYLH 628
                +++ +V EY++ G L  ++            RLD     +R        G+ Y H
Sbjct: 84  VISTPSDIFMVMEYVSGGELFDYI--------CKNGRLD--EKESRRLFQQILSGVDYCH 133

Query: 629 TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
                 ++HRD+K  N+LLD +  AK++DFGLS      E    S    GS  Y  PE  
Sbjct: 134 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVI 187

Query: 689 WRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
             +     + D++S GV+L+ ++C        LP D  ++
Sbjct: 188 SGRLYAGPEVDIWSSGVILYALLCGT------LPFDDDHV 221

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 95.8 bits (239), Expect = 5e-21
 Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 25/199 (12%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           +G G F  V +  ++      A         S +   + E E  +   L+H ++V L   
Sbjct: 19  LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78

Query: 578 CDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
             E+    L+++ +  G L      R +   +D      +Q L+A       + + H   
Sbjct: 79  ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCI-QQILEA-------VLHCH--- 127

Query: 632 ERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
           + G++HR++K  N+LL    +    K++DFGL+      E         G+ GYL PE  
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG-EQQAWFGFA-GTPGYLSPEVL 185

Query: 689 WRQQLTEKSDVYSFGVVLF 707
            +    +  D+++ GV+L+
Sbjct: 186 RKDPYGKPVDLWACGVILY 204

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 93.9 bits (234), Expect = 6e-21
 Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 27/201 (13%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHR-HLVSLIG 576
           +G G F  V +          A K  +   + +   AE   EI +L   +    +++L  
Sbjct: 37  LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96

Query: 577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLT-------WKQRLDACIGAARGLHYLHT 629
             +  +E+IL+ EY A G + S         ++        KQ L+       G++YLH 
Sbjct: 97  VYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILE-------GVYYLH- 148

Query: 630 GAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPE 686
             +  I+H D+K  NILL         K+ DFG+S+    + H      + G+  YL PE
Sbjct: 149 --QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK---IGHACELREIMGTPEYLAPE 203

Query: 687 YFWRQQLTEKSDVYSFGVVLF 707
                 +T  +D+++ G++ +
Sbjct: 204 ILNYDPITTATDMWNIGIIAY 224

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 93.8 bits (234), Expect = 6e-21
 Identities = 56/301 (18%), Positives = 115/301 (38%), Gaps = 61/301 (20%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           +G G FG V +  E         K    +        + EI +L+  RHR+++ L    +
Sbjct: 13  LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHESFE 71

Query: 580 EQNEMILVYEYMANGTL-------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
              E+++++E+++   +          L   ++      Q  +        L +LH    
Sbjct: 72  SMEELVMIFEFISGLDIFERINTSAFELNEREIVSYV-HQVCE-------ALQFLH---S 120

Query: 633 RGIIHRDVKTTNILL--DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
             I H D++  NI+     +   K+ +FG ++    ++       +  +  Y  PE    
Sbjct: 121 HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ---LKPGDNFRLLFTAPEYYAPEVHQH 177

Query: 691 QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG 750
             ++  +D++S G +++ ++     INP L +              Q+ +++I    +  
Sbjct: 178 DVVSTATDMWSLGTLVYVLLSG---INPFLAETN------------QQIIENI----MNA 218

Query: 751 NYSPESLEKFGEIAE-------KCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQN 803
            Y+ +  E F EI+        + L  E K+R T  E L H          W++    + 
Sbjct: 219 EYTFDE-EAFKEISIEAMDFVDRLLVKERKSRMTASEALQH---------PWLKQKIERV 268

Query: 804 S 804
           S
Sbjct: 269 S 269

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 96.4 bits (240), Expect = 8e-21
 Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 15/213 (7%)

Query: 509 RVATNNFDESLMIGVGGFGKVFKGEIEDC-TLAAIK---RANPQSEQGLAEFETEIEMLS 564
            +  + F +  ++G GGFG+VF  +++    L A K   +   +  +G      E ++L+
Sbjct: 181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240

Query: 565 KLRHRHLVSLIGFCDEQNEMI-LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR- 622
           K+  R +VSL  +  E    + LV   M  G +R H++  D     +++   A    A+ 
Sbjct: 241 KVHSRFIVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR-AIFYTAQI 298

Query: 623 --GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSF 680
             GL +LH   +R II+RD+K  N+LLD++   ++SD GL+    + +         G+ 
Sbjct: 299 VSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYA-GTP 353

Query: 681 GYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           G++ PE    ++     D ++ GV L+E++ AR
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 94.9 bits (236), Expect = 3e-20
 Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 16/212 (7%)

Query: 509 RVATNNFDESLMIGVGGFGKVFKGEIEDC-TLAAIK---RANPQSEQGLAEFETEIEMLS 564
            V  N F +  ++G GGFG+V   ++     + A K   +   +  +G A    E ++L 
Sbjct: 180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILE 239

Query: 565 KLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR-- 622
           K+  R +VSL    + ++ + LV   M  G L+ H++          +   A   AA   
Sbjct: 240 KVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEAR---AVFYAAEIC 296

Query: 623 -GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG 681
            GL  LH      I++RD+K  NILLD++   ++SD GL+   P  +       V G+ G
Sbjct: 297 CGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK--GRV-GTVG 350

Query: 682 YLDPEYFWRQQLTEKSDVYSFGVVLFEVVCAR 713
           Y+ PE    ++ T   D ++ G +L+E++  +
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 91.0 bits (226), Expect = 3e-20
 Identities = 34/262 (12%), Positives = 76/262 (29%), Gaps = 54/262 (20%)

Query: 521 IGVGGFGKVFKGEIEDCTLA---AIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSL 574
            G     + ++    D  L    A+   +PQ    +  L E  +    LS++    +  +
Sbjct: 39  HGGVPPLQFWQAL--DTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARV 96

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
           +     +   ++V E++  G+L+     S  P       + A    A      H     G
Sbjct: 97  LDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPV----GAIRAMQSLAAAADAAH---RAG 149

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
           +       + +              +S  G           V      +           
Sbjct: 150 VALSIDHPSRVR-------------VSIDG---------DVVLAYPATMPDA-------N 180

Query: 695 EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSP 754
            + D+   G  L+ ++  R  +     +  +  A+       + +    I+P       P
Sbjct: 181 PQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE-------RDTAGQPIEPADIDRDIP 233

Query: 755 ESLEKFGEIAEKCLDDEGKNRP 776
             +     +A + +  +G  R 
Sbjct: 234 FQIS---AVAARSVQGDGGIRS 252

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 90.4 bits (225), Expect = 8e-20
 Identities = 66/321 (20%), Positives = 117/321 (36%), Gaps = 55/321 (17%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGF 577
           ++G G   +V     +      A+K    Q     +    E+EML + + HR+++ LI F
Sbjct: 20  VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79

Query: 578 CDEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
            +E++   LV+E M  G++      R H    +   +  +    A       L +LH   
Sbjct: 80  FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVV-QDVASA-------LDFLH--- 128

Query: 632 ERGIIHRDVKTTNILL---DENFVAKMSDFGLSK------TGPSMEHTHVSTAVKGSFGY 682
            +GI HRD+K  NIL    ++    K+ DF L            +    + T   GS  Y
Sbjct: 129 NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC-GSAEY 187

Query: 683 LDPEYFWRQQLTEKS-----DVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ 737
           + PE                D++S GV+L+ ++       P       +   W       
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGY----PPFVGRCGSDCGWDRGEACP 243

Query: 738 RSLKSIIDPHLKGNYSPESLEKFGEIAE-------KCLDDEGKNRPTMGEVLWHLEYVLQ 790
                + +   +G Y     + +  I+        K L  + K R +  +VL H      
Sbjct: 244 ACQNMLFESIQEGKYEFPD-KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH------ 296

Query: 791 LHEAWMRTDDRQNSFSSSQAL 811
               W++    +N+  +   L
Sbjct: 297 ---PWVQGCAPENTLPTPMVL 314

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 91.3 bits (227), Expect = 1e-19
 Identities = 51/227 (22%), Positives = 84/227 (37%), Gaps = 38/227 (16%)

Query: 507 EIRVATNNFDESLMIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEM 562
           E+R+  ++F+   +IG G F +V     K   +   +  + + +      ++ F  E ++
Sbjct: 55  EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDV 114

Query: 563 LSKLRHRHLVSLI-GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA 621
           L     R +  L   F DE   + LV EY   G L + L            +    I A 
Sbjct: 115 LVNGDRRWITQLHFAFQDENY-LYLVMEYYVGGDLLTLL-----------SKFGERIPAE 162

Query: 622 R----------GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH 671
                       +  +H     G +HRD+K  NILLD     +++DFG      +     
Sbjct: 163 MARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVR 219

Query: 672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVY-------SFGVVLFEVVC 711
              AV G+  YL PE          +  Y       + GV  +E+  
Sbjct: 220 SLVAV-GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY 265

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 90.6 bits (225), Expect = 3e-19
 Identities = 48/225 (21%), Positives = 89/225 (39%), Gaps = 36/225 (16%)

Query: 507 EIRVATNNFDESLMIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEM 562
           ++R+   +F+   +IG G FG+V     K   +   +  + +         A F  E ++
Sbjct: 68  QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDV 127

Query: 563 LSKLRHRHLVSLIG-FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA 621
           L     + + +L   F D+ N + LV +Y   G L + L            + +  +   
Sbjct: 128 LVNGDSKWITTLHYAFQDDNN-LYLVMDYYVGGDLLTLL-----------SKFEDRLPEE 175

Query: 622 R----------GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH 671
                       +  +H   +   +HRD+K  NIL+D N   +++DFG            
Sbjct: 176 MARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 232

Query: 672 VSTAVKGSFGYLDPEYFWRQQLTEKS-----DVYSFGVVLFEVVC 711
            S AV G+  Y+ PE     +  +       D +S GV ++E++ 
Sbjct: 233 SSVAV-GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLY 276

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 88.5 bits (220), Expect = 4e-19
 Identities = 45/198 (22%), Positives = 84/198 (42%), Gaps = 27/198 (13%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGFC 578
           +G G F    K    +     A+K  + + E      + EI  L     H ++V L    
Sbjct: 19  LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANT---QKEITALKLCEGHPNIVKLHEVF 75

Query: 579 DEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
            +Q    LV E +  G L      + H   ++   +  ++ + A       + ++H   +
Sbjct: 76  HDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIM-RKLVSA-------VSHMH---D 124

Query: 633 RGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW 689
            G++HRD+K  N+L    ++N   K+ DFG ++  P  ++  + T    +  Y  PE   
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPC-FTLHYAAPELLN 182

Query: 690 RQQLTEKSDVYSFGVVLF 707
           +    E  D++S GV+L+
Sbjct: 183 QNGYDESCDLWSLGVILY 200

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 88.0 bits (219), Expect = 4e-19
 Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 23/166 (13%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFET--EIEMLSKLRHRHLVSLIGF 577
           IG G +G VFK    +   + AIK+     +  + +     EI ML +L+H +LV+L+  
Sbjct: 11  IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70

Query: 578 CDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWK----QRLDACIGAARGLHYLHTGA 631
              +  + LV+EY  + T+   L  +   +P    K    Q L       + +++ H   
Sbjct: 71  FRRKRRLHLVFEYC-DHTVLHELDRYQRGVPEHLVKSITWQTL-------QAVNFCH--- 119

Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGL--SKTGPSMEHTH-VST 674
           +   IHRDVK  NIL+ ++ V K+ DFG     TGPS  +   V+T
Sbjct: 120 KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVAT 165

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 87.7 bits (218), Expect = 6e-19
 Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 27/216 (12%)

Query: 509 RVATNNFDESLMIGVGGFGKVFKG-EIEDCTLAAIK---RANPQSEQGLAEFETEIEMLS 564
           +    +F    ++G G F  V    E+      AIK   + +   E  +     E +++S
Sbjct: 26  KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 85

Query: 565 KLRHRHLVSLIG-FCDEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWKQRLDACI 618
           +L H   V L   F D++  +     Y  NG L  ++     F                 
Sbjct: 86  RLDHPFFVKLYFTFQDDEK-LYFGLSYAKNGELLKYIRKIGSFDET----------CTRF 134

Query: 619 GAA---RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             A     L YLH    +GIIHRD+K  NILL+E+   +++DFG +K          + +
Sbjct: 135 YTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 191

Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             G+  Y+ PE    +   + SD+++ G +++++V 
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 88.0 bits (219), Expect = 6e-19
 Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 23/166 (13%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFET--EIEMLSKLRHRHLVSLIGF 577
           +G G +G V K    +   + AIK+     +  + +     EI++L +LRH +LV+L+  
Sbjct: 33  VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92

Query: 578 CDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWK----QRLDACIGAARGLHYLHTGA 631
           C ++    LV+E++ + T+   L  F + L     +    Q +        G+ + H   
Sbjct: 93  CKKKKRWYLVFEFV-DHTILDDLELFPNGLDYQVVQKYLFQII-------NGIGFCH--- 141

Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHTH-VST 674
              IIHRD+K  NIL+ ++ V K+ DFG ++T   P   +   V+T
Sbjct: 142 SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVAT 187

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 89.9 bits (223), Expect = 1e-18
 Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 19/214 (8%)

Query: 509 RVATNNFDESLMIGVGGFGKVFKGEIEDC-TLAAIK---RANPQSEQGLAEFETEIEMLS 564
            +  N+F    +IG GGFG+V+     D   + A+K   +   + +QG      E  MLS
Sbjct: 185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244

Query: 565 KL---RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA 621
            +       +V +       +++  + + M  G L  HL    +      +   A I   
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI--I 302

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME-HTHVSTAVKGSF 680
            GL ++H    R +++RD+K  NILLDE+   ++SD GL+      + H  V T      
Sbjct: 303 LGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH----- 354

Query: 681 GYLDPEYFWRQQLTEKS-DVYSFGVVLFEVVCAR 713
           GY+ PE   +    + S D +S G +LF+++   
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 87.1 bits (216), Expect = 3e-18
 Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 29/220 (13%)

Query: 507 EIRVATNNFDESLMIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEM 562
           ++R+   +++   +IG G FG+V     K   +   +  + +         A F  E ++
Sbjct: 63  DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122

Query: 563 LSKLRHRHLVSLIG-FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD---ACI 618
           ++      +V L   F D++  + +V EYM  G L + +             +    A  
Sbjct: 123 MAFANSPWVVQLFYAFQDDRY-LYMVMEYMPGGDLVNLMS---------NYDVPEKWARF 172

Query: 619 GAAR---GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
             A     L  +H     G IHRDVK  N+LLD++   K++DFG              TA
Sbjct: 173 YTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 229

Query: 676 VKGSFGYLDPEYFWRQQLTEK----SDVYSFGVVLFEVVC 711
           V G+  Y+ PE    Q          D +S GV L+E++ 
Sbjct: 230 V-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 268

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 86.1 bits (213), Expect = 4e-18
 Identities = 55/247 (22%), Positives = 94/247 (38%), Gaps = 35/247 (14%)

Query: 553 LAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQ 612
             + +  +  +     R L S+       +   +  + +++              LT + 
Sbjct: 135 FRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEH 194

Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            +      A+G+ +L   A R  IHRD+   NILL E  V K+ DFGL++     +    
Sbjct: 195 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----DIYKD 246

Query: 673 STAVKGSFGYLD-----PEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
              V+     L      PE  + +  T +SDV+SFGV+L+E+    A   P +  D+   
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 306

Query: 728 ADWAMKWQKQRSLKSIIDPHLKGNY---SPE-SLEKFGEIAEKCLDDEGKNRPTMGEVLW 783
                               LK      +P+ +  +  +    C   E   RPT  E++ 
Sbjct: 307 ------------------RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 348

Query: 784 HLEYVLQ 790
           HL  +LQ
Sbjct: 349 HLGNLLQ 355

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 65.7 bits (160), Expect = 2e-11
 Identities = 28/151 (18%), Positives = 58/151 (38%), Gaps = 18/151 (11%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLV 572
           +G G FG+V + +         C   A+K      +        +E+++L  +  H ++V
Sbjct: 30  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89

Query: 573 SLIGFC-DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
           +L+G C      ++++ E+   G L ++L           +R +      +G  +     
Sbjct: 90  NLLGACTKPGGPLMVIVEFCKFGNLSTYL---------RSKRNEFVPYKTKGARFRQGKD 140

Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSK 662
             G I  D+K     +  +  +  S F   K
Sbjct: 141 YVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 85.1 bits (211), Expect = 6e-18
 Identities = 40/197 (20%), Positives = 80/197 (40%), Gaps = 21/197 (10%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGF 577
           ++G+G  GKV +          A+K           +   E++   +     H+V ++  
Sbjct: 36  VLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDV 90

Query: 578 CDEQNEMI----LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
            +  +       ++ E M  G L S +        T ++  +        + +LH     
Sbjct: 91  YENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SH 147

Query: 634 GIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
            I HRDVK  N+L    +++ V K++DFG +K         + T    +  Y+ PE    
Sbjct: 148 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE---TTQNALQTPC-YTPYYVAPEVLGP 203

Query: 691 QQLTEKSDVYSFGVVLF 707
           ++  +  D++S GV+++
Sbjct: 204 EKYDKSCDMWSLGVIMY 220

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 83.8 bits (208), Expect = 1e-17
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 14/160 (8%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFET---EIEMLSKLRHRHLVSLIG 576
           +G G +  V+KG         A+K     SE+G     T   EI ++ +L+H ++V L  
Sbjct: 13  LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPS--TAIREISLMKELKHENIVRLYD 70

Query: 577 FCDEQNEMILVYEYMAN---GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
               +N++ LV+E+M N     + S   G+    L             +GL + H   E 
Sbjct: 71  VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---EN 127

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGL--SKTGPSMEHTH 671
            I+HRD+K  N+L+++    K+ DFGL  +   P    + 
Sbjct: 128 KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSS 167

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 83.9 bits (208), Expect = 2e-17
 Identities = 54/287 (18%), Positives = 97/287 (33%), Gaps = 61/287 (21%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFC 578
           IGVG +    +          A+K  +            EIE+L +  +H ++++L    
Sbjct: 30  IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDP----TEEIEILLRYGQHPNIITLKDVY 85

Query: 579 DEQNEMILVYEYMANGTL------RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
           D+   + +V E M  G L      +      +   +               + YLH    
Sbjct: 86  DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVL-FTITKT-------VEYLH---A 134

Query: 633 RGIIHRDVKTTNILL----DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
           +G++HRD+K +NIL           ++ DFG +K   +     + T    +  ++ PE  
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL-LMTPC-YTANFVAPEVL 192

Query: 689 WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD----WAMKWQKQRSLKSII 744
            RQ      D++S GV+L+                   L                + + I
Sbjct: 193 ERQGYDAACDIWSLGVLLY-----------------TMLTGYTPFANGPDDTPEEILARI 235

Query: 745 DPHLKGNYSPESLEKFGEIAE-------KCLDDEGKNRPTMGEVLWH 784
                G +S      +  +++       K L  +   R T   VL H
Sbjct: 236 ---GSGKFSLSG-GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 84.4 bits (209), Expect = 3e-17
 Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 14/209 (6%)

Query: 509 RVATNNFDESLMIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLS 564
           RV  N F+   ++G G FGKV     K       +  +K+    ++  +A   TE  +L 
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 203

Query: 565 KLRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR 622
             RH  L +L      Q    +  V EY   G L  HL    +      +   A I +A 
Sbjct: 204 NSRHPFLTAL--KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA- 260

Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
            L YLH  +E+ +++RD+K  N++LD++   K++DFGL K G  ++         G+  Y
Sbjct: 261 -LDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG--IKDGATMKTFCGTPEY 315

Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           L PE           D +  GVV++E++C
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMC 344

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 82.7 bits (205), Expect = 3e-17
 Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 27/172 (15%)

Query: 513 NNFDESLMIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFET---EIEMLSKLRH 568
             + +   +G G +  V+KG       L A+K    + E+G     T   E+ +L  L+H
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPC--TAIREVSLLKDLKH 59

Query: 569 RHLVSLIGFCDEQNEMILVYEYMAN---GTLRSHLFGSDLPPLTWK----QRLDACIGAA 621
            ++V+L      +  + LV+EY+       L     G+ +     K    Q L       
Sbjct: 60  ANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDC--GNIINMHNVKLFLFQLL------- 110

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL--SKTGPSMEHTH 671
           RGL Y H    + ++HRD+K  N+L++E    K++DFGL  +K+ P+  + +
Sbjct: 111 RGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN 159

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 79.5 bits (197), Expect = 3e-16
 Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 26/164 (15%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQ-GLAEFET---EIEMLSKLRHRHLVSLI 575
           IG G +G VFK    E   + A+KR     +  G+    +   EI +L +L+H+++V L 
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPS--SALREICLLKELKHKNIVRLH 67

Query: 576 GFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWK----QRLDACIGAARGLHYLHT 629
                  ++ LV+E+  +  L+ +      DL P   K    Q L       +GL + H 
Sbjct: 68  DVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLL-------KGLGFCH- 118

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGL--SKTGPSMEHTH 671
              R ++HRD+K  N+L++ N   K+++FGL  +   P   ++ 
Sbjct: 119 --SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSA 160

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 80.0 bits (198), Expect = 4e-16
 Identities = 55/216 (25%), Positives = 85/216 (39%), Gaps = 32/216 (14%)

Query: 509 RVATNNFDESLMIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFE---TEIEMLS 564
               + FD    +G G FG+V      E     A+K  + Q    L + E    E  +L 
Sbjct: 37  TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96

Query: 565 KLRHRHLVSLIG-FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLD-------- 615
            +    LV L   F D  N + +V EY+A G + SHL            R          
Sbjct: 97  AVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRI--------GRFSEPHARFYA 147

Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
           A I       YLH      +I+RD+K  N+L+D+    +++DFG +K       T   T 
Sbjct: 148 AQIVLT--FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTP 202

Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
                  L PE    +   +  D ++ GV+++E+  
Sbjct: 203 -----EALAPEIILSKGYNKAVDWWALGVLIYEMAA 233

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 79.1 bits (196), Expect = 4e-16
 Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 27/165 (16%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQ-GLAEFET---EIEMLSKLRHRHLVSLI 575
           IG G +G V+K        + A+K+    +E  G+    T   EI +L +L H ++V L+
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS--TAIREISLLKELNHPNIVKLL 68

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTW-------KQRLDACIGAARGLHYLH 628
                +N++ LV+E++ +  L+  +  S L  +          Q L       +GL + H
Sbjct: 69  DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL-------QGLAFCH 120

Query: 629 TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK--TGPSMEHTH 671
                 ++HRD+K  N+L++     K++DFGL++    P   +TH
Sbjct: 121 ---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 79.1 bits (196), Expect = 4e-16
 Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 31/166 (18%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFE----T---EIEMLSKLRHRHLVS 573
           +G G +G V+K +     + A+KR    +E      E    T   EI +L +L H ++VS
Sbjct: 29  VGEGTYGVVYKAKDSQGRIVALKRIRLDAED-----EGIPSTAIREISLLKELHHPNIVS 83

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWK----QRLDACIGAARGLHYL 627
           LI     +  + LV+E+M    L+  L    + L     K    Q L       RG+ + 
Sbjct: 84  LIDVIHSERCLTLVFEFMEKD-LKKVLDENKTGLQDSQIKIYLYQLL-------RGVAHC 135

Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGL--SKTGPSMEHTH 671
           H   +  I+HRD+K  N+L++ +   K++DFGL  +   P   +TH
Sbjct: 136 H---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 79.2 bits (196), Expect = 5e-16
 Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 15/209 (7%)

Query: 509 RVATNNFDESLMIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLS 564
           +V  N+FD   ++G G FGKV     K       +  +++    ++  +A   TE  +L 
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60

Query: 565 KLRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR 622
             RH  L +L      Q    +  V EY   G L  HL    +      +   A I +A 
Sbjct: 61  NTRHPFLTAL--KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA- 117

Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
            L YLH    R +++RD+K  N++LD++   K++DFGL K G  +          G+  Y
Sbjct: 118 -LEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG--ISDGATMKTFCGTPEY 171

Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           L PE           D +  GVV++E++C
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMC 200

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 79.3 bits (196), Expect = 7e-16
 Identities = 68/318 (21%), Positives = 117/318 (36%), Gaps = 80/318 (25%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGF-- 577
           IG G FG VF+ ++ +    AIK+           F+  E++++  ++H ++V L  F  
Sbjct: 48  IGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAFFY 102

Query: 578 ----CDEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWK----QRLDACIGAARGL 624
                 ++  + LV EY+   T+             +P L  K    Q L       R L
Sbjct: 103 SNGDKKDEVFLNLVLEYV-PETVYRASRHYAKLKQTMPMLLIKLYMYQLL-------RSL 154

Query: 625 HYLHTGAERGIIHRDVKTTNILLDEN-FVAKMSDFGLSKT-GPSMEHTH-VST----AVK 677
            Y+H+    GI HRD+K  N+LLD    V K+ DFG +K       +   + +    A  
Sbjct: 155 AYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRA-- 209

Query: 678 GSFGYLDPE-YFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL--------- 727
                  PE  F     T   D++S G V+ E++  + +       DQ+           
Sbjct: 210 -------PELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPS 262

Query: 728 -ADW-AM----------KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
                 M          + +       +  P       P+++    ++  + L+     R
Sbjct: 263 REQIKTMNPNYMEHKFPQIRPH-PFSKVFRPRT----PPDAI----DLISRLLEYTPSAR 313

Query: 776 PTMGEVLWHLEYVLQLHE 793
            T  E L H  +  +L  
Sbjct: 314 LTAIEALCH-PFFDELRT 330

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 77.6 bits (192), Expect = 1e-15
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 31/166 (18%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFE----T---EIEMLSKLRHRHLVS 573
           IG G +G V+K +       A+K+   + E      E    T   EI +L +L+H ++V 
Sbjct: 10  IGEGTYGVVYKAQNNYGETFALKKIRLEKED-----EGIPSTTIREISILKELKHSNIVK 64

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHL--FGSDLPPLTWK----QRLDACIGAARGLHYL 627
           L      +  ++LV+E++    L+  L      L  +T K    Q L        G+ Y 
Sbjct: 65  LYDVIHTKKRLVLVFEHLDQD-LKKLLDVCEGGLESVTAKSFLLQLL-------NGIAYC 116

Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK--TGPSMEHTH 671
           H   +R ++HRD+K  N+L++     K++DFGL++    P  ++TH
Sbjct: 117 H---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 77.6 bits (192), Expect = 1e-15
 Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 33/219 (15%)

Query: 509 RVATNNFDESLMIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIE--M 562
           +   + F+   ++G G FGKVF        +   L A+K     + +      T++E  +
Sbjct: 20  KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79

Query: 563 LSKLRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHL-----FGSDLPPLTWKQRLD 615
           L ++ H  +V L      Q E  + L+ +++  G L + L     F  +          D
Sbjct: 80  LVEVNHPFIVKL--HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE----------D 127

Query: 616 ACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
                A     L +LH     GII+RD+K  NILLDE    K++DFGLSK    ++H   
Sbjct: 128 VKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKES--IDHEKK 182

Query: 673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           + +  G+  Y+ PE   R+  T+ +D +SFGV++FE++ 
Sbjct: 183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 78.0 bits (193), Expect = 1e-15
 Identities = 49/168 (29%), Positives = 85/168 (50%), Gaps = 31/168 (18%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKR----ANPQSEQGLAEFET---EIEMLSKLRHRHLV 572
           +G G F  V+K  +     + AIK+       +++ G+    T   EI++L +L H +++
Sbjct: 18  LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINR--TALREIKLLQELSHPNII 75

Query: 573 SLIGFCDEQNEMILVYEYMAN---GTLRSHLFGSDLPPLTWK----QRLDACIGAARGLH 625
            L+     ++ + LV+++M       ++ +     L P   K      L       +GL 
Sbjct: 76  GLLDAFGHKSNISLVFDFMETDLEVIIKDN--SLVLTPSHIKAYMLMTL-------QGLE 126

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT--GPSMEHTH 671
           YLH   +  I+HRD+K  N+LLDEN V K++DFGL+K+   P+  +TH
Sbjct: 127 YLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTH 171

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 78.2 bits (193), Expect = 2e-15
 Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 36/204 (17%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFC 578
           +G+G  GKV +          A+K       Q   +   E+E+  +  +  H+V ++   
Sbjct: 70  LGLGINGKVLQIFNKRTQEKFALK-----MLQDCPKARREVELHWRASQCPHIVRIVDVY 124

Query: 579 DEQNEMI----LVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC-----IGAARGLHYLHT 629
           +          +V E +  G L S +        T +   +A      IG A  + YLH 
Sbjct: 125 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER---EASEIMKSIGEA--IQYLH- 178

Query: 630 GAERGIIHRDVKTTNILL---DENFVAKMSDFGLSK---TGPSMEHTHVSTAVKGSFGYL 683
                I HRDVK  N+L      N + K++DFG +K   +  S+  T   T       Y+
Sbjct: 179 --SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL-TTPCYTP-----YYV 230

Query: 684 DPEYFWRQQLTEKSDVYSFGVVLF 707
            PE    ++  +  D++S GV+++
Sbjct: 231 APEVLGPEKYDKSCDMWSLGVIMY 254

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 78.9 bits (194), Expect = 3e-15
 Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 16/210 (7%)

Query: 509 RVATNNFDESLMIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLS 564
           R+   +F+  +++G G FGKV     KG  E   +  +K+     +  +     E  +L+
Sbjct: 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLA 396

Query: 565 K-LRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA 621
              +   L  L      Q    +  V EY+  G L  H+               A I  A
Sbjct: 397 LPGKPPFLTQL--HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI--A 452

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG 681
            GL +L     +GII+RD+K  N++LD     K++DFG+ K    +     +    G+  
Sbjct: 453 IGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN--IWDGVTTKTFCGTPD 507

Query: 682 YLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           Y+ PE    Q   +  D ++FGV+L+E++ 
Sbjct: 508 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 537

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 76.5 bits (189), Expect = 3e-15
 Identities = 47/172 (27%), Positives = 72/172 (41%), Gaps = 31/172 (18%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQ-GLAEFET----EIEMLSKLR---HRHL 571
           IGVG +G V+K  +       A+K     +   G          E+ +L +L    H ++
Sbjct: 17  IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76

Query: 572 VSLI-----GFCDEQNEMILVYEYMAN--GTLRSHLFGSDLPPLTWK----QRLDACIGA 620
           V L+        D + ++ LV+E++     T         LP  T K    Q L      
Sbjct: 77  VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL------ 130

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTH 671
            RGL +LH      I+HRD+K  NIL+      K++DFGL++     M  T 
Sbjct: 131 -RGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTP 178

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 75.7 bits (187), Expect = 8e-15
 Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 35/221 (15%)

Query: 509 RVATNNFDESLMIGVGGFGKVF----KGEIEDCTLAAIK----RANPQSEQGLAEFETEI 560
           ++    F+   ++G GG+GKVF            + A+K        ++ +  A  + E 
Sbjct: 13  KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72

Query: 561 EMLSKLRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHL-----FGSDLPPLTWKQR 613
            +L +++H  +V L      Q    + L+ EY++ G L   L     F  D         
Sbjct: 73  NILEEVKHPFIVDL--IYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED--------- 121

Query: 614 LDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT 670
             AC   A     L +LH   ++GII+RD+K  NI+L+     K++DFGL K    +   
Sbjct: 122 -TACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES--IHDG 175

Query: 671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
            V+    G+  Y+ PE   R       D +S G ++++++ 
Sbjct: 176 TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLT 216

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 75.7 bits (187), Expect = 8e-15
 Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 50/178 (28%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFE----T---EIEMLSKLRHRHLV 572
           +G G +G+V+K  +       AIKR   + E+     E    T   E+ +L +L+HR+++
Sbjct: 42  LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE-----EGVPGTAIREVSLLKELQHRNII 96

Query: 573 SLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA----------- 621
            L       + + L++EY            +DL     K+ +D     +           
Sbjct: 97  ELKSVIHHNHRLHLIFEYAE----------NDL-----KKYMDKNPDVSMRVIKSFLYQL 141

Query: 622 -RGLHYLHTGAERGIIHRDVKTTNILLDENFVA-----KMSDFGL--SKTGPSMEHTH 671
             G+++ H    R  +HRD+K  N+LL  +  +     K+ DFGL  +   P  + TH
Sbjct: 142 INGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTH 196

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 75.3 bits (186), Expect = 8e-15
 Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 32/216 (14%)

Query: 509 RVATNNFDESLMIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFE---TEIEMLS 564
           + +  +F     +G G FG+V       +    A+K    +    L + E    E  MLS
Sbjct: 2   KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61

Query: 565 KLRHRHLVSLIG-FCDEQNEMILVYEYMANGTLRSHL-----FGSDLPPLTWKQRLDACI 618
            + H  ++ + G F D Q  + ++ +Y+  G L S L     F +            A  
Sbjct: 62  IVTHPFIIRMWGTFQDAQQ-IFMIMDYIEGGELFSLLRKSQRFPNP----------VAKF 110

Query: 619 GAAR---GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
            AA     L YLH    + II+RD+K  NILLD+N   K++DFG +K  P + +T   T 
Sbjct: 111 YAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTP 167

Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
                 Y+ PE    +   +  D +SFG++++E++ 
Sbjct: 168 -----DYIAPEVVSTKPYNKSIDWWSFGILIYEMLA 198

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 76.3 bits (188), Expect = 9e-15
 Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 34/161 (21%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFET-EIEMLSKLRHRHLVSLIGF- 577
           IG G FG V++    +   L AIK+           F+  E++++ KL H ++V L  F 
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 116

Query: 578 ---CDEQNEMIL--VYEYMANGTL-----RSHLFGSDLPPLTWK----QRLDACIGAARG 623
               ++++E+ L  V +Y+   T+             LP +  K    Q         R 
Sbjct: 117 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLF-------RS 168

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDEN-FVAKMSDFGLSKT 663
           L Y+H+    GI HRD+K  N+LLD +  V K+ DFG +K 
Sbjct: 169 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 76.0 bits (187), Expect = 1e-14
 Identities = 42/188 (22%), Positives = 73/188 (38%), Gaps = 44/188 (23%)

Query: 517 ESLMIGVGGFGKVFKG---EIEDCTLAAIKRAN----PQSEQGLAEFETEIEMLSKLRHR 569
           E   +G G +G V+K    + +D    A+K+        S         EI +L +L+H 
Sbjct: 25  EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACR------EIALLRELKHP 78

Query: 570 HLVSLIGFCDEQNEMI--LVYEYM---------ANGTLRSHLFGSDLPPLTWK----QRL 614
           +++SL        +    L+++Y           +   +++     LP    K    Q L
Sbjct: 79  NVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL 138

Query: 615 DACIGAARGLHYLHTGAERGIIHRDVKTTNILL----DENFVAKMSDFGLSK--TGPSME 668
                   G+HYLH      ++HRD+K  NIL+     E    K++D G ++    P   
Sbjct: 139 -------DGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 188

Query: 669 HTHVSTAV 676
              +   V
Sbjct: 189 LADLDPVV 196

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 74.7 bits (184), Expect = 2e-14
 Identities = 56/264 (21%), Positives = 103/264 (39%), Gaps = 52/264 (19%)

Query: 559 EIEMLSKLRHRHLVSLI------GFCDEQNEMILVYEYMA---NGTLRSHLFGSDLPPLT 609
           E+ ++  + H++++ L+         +E  ++ +V E M       ++  L    +  L 
Sbjct: 74  ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL 133

Query: 610 WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH 669
           + Q L        G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   
Sbjct: 134 Y-QML-------CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 182

Query: 670 T--HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
              +V T       Y  PE        E  D++S G ++ E++    +   T   DQ N 
Sbjct: 183 MTPYVVTRY-----YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 237

Query: 728 ADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY 787
                          +I+    G   PE ++K        +    +NRP      +   +
Sbjct: 238 ---------------VIE--QLGTPCPEFMKKLQPTVRTYV----ENRPKYAGYSFEKLF 276

Query: 788 VLQLHEAWMRTDDRQNSFSSSQAL 811
                +     D   N   +SQA 
Sbjct: 277 ----PDVLFPADSEHNKLKASQAR 296

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 74.2 bits (183), Expect = 2e-14
 Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 38/205 (18%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIG-F 577
           +G G + +VF+   I +     +K   P  ++   + + EI++L  LR   ++++L    
Sbjct: 44  LGRGKYSEVFEAINITNNEKVVVKILKPVKKK---KIKREIKILENLRGGPNIITLADIV 100

Query: 578 CDEQNEM-ILVYEYMANGTLRSHLFGSDLPPLT-------WKQRLDACIGAARGLHYLHT 629
            D  +    LV+E++ N   +          LT         + L       + L Y H+
Sbjct: 101 KDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEIL-------KALDYCHS 148

Query: 630 GAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTG-PSMEHTH-VSTAVKGSFGYLDPE 686
               GI+HRDVK  N+++D E+   ++ D+GL++   P  E+   V++       +  PE
Sbjct: 149 ---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY-----FKGPE 200

Query: 687 YFWRQQLTEKS-DVYSFGVVLFEVV 710
                Q+ + S D++S G +L  ++
Sbjct: 201 LLVDYQMYDYSLDMWSLGCMLASMI 225

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 74.2 bits (183), Expect = 3e-14
 Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 40/163 (24%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFE----T---EIEMLSKLRHRHLV 572
           IG G FG+VFK    +     A+K+   ++E+     E    T   EI++L  L+H ++V
Sbjct: 25  IGQGTFGEVFKARHRKTGQKVALKKVLMENEK-----EGFPITALREIKILQLLKHENVV 79

Query: 573 SLIG--------FCDEQNEMILVYEYMAN---GTLRSHLFGSDLPPLTWK----QRLDAC 617
           +LI         +   +  + LV+++  +   G L +            K      L   
Sbjct: 80  NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV--LVKFTLSEIKRVMQMLL--- 134

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL 660
                GL+Y+H      I+HRD+K  N+L+  + V K++DFGL
Sbjct: 135 ----NGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGL 170

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 73.9 bits (182), Expect = 4e-14
 Identities = 51/233 (21%), Positives = 88/233 (37%), Gaps = 43/233 (18%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAE--FET---------EIEMLSKLRHR 569
           I  G +G V  G   +    AIKR       G                 EI +L+   H 
Sbjct: 30  ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89

Query: 570 HLVSLI-----GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWK-------QRLDAC 617
           +++ L            +++ LV E M   T  + +       ++ +         L   
Sbjct: 90  NILGLRDIFVHFEEPAMHKLYLVTELM--RTDLAQVIHDQRIVISPQHIQYFMYHIL--- 144

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT--HVSTA 675
                GLH LH     G++HRD+   NILL +N    + DF L++   +  +   +V+  
Sbjct: 145 ----LGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR 197

Query: 676 VKGSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
                 Y  PE     +  T+  D++S G V+ E+   +A+   +   +Q+N 
Sbjct: 198 W-----YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 73.4 bits (181), Expect = 5e-14
 Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 28/216 (12%)

Query: 509 RVATNNFDESLMIGVGGFGKVFKGEIEDC-TLAAIK-------RANPQSEQGLAE---FE 557
           ++   +F    M+G G FGKVF  E +      AIK         +   E  + E     
Sbjct: 13  KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 72

Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLD 615
                     H  L  +  FC  Q +  +  V EY+  G L  H+       L+      
Sbjct: 73  LAW------EHPFLTHM--FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA 124

Query: 616 ACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTA 675
           A I     L +LH    +GI++RD+K  NILLD++   K++DFG+ K    M     +  
Sbjct: 125 AEIILG--LQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN--MLGDAKTNT 177

Query: 676 VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
             G+  Y+ PE    Q+     D +SFGV+L+E++ 
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI 213

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 73.0 bits (180), Expect = 6e-14
 Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 16/210 (7%)

Query: 509 RVATNNFDESLMIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLS 564
           R+   +F+  +++G G FGKV     KG  E   +  +K+     +  +     E  +L+
Sbjct: 16  RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLA 75

Query: 565 K-LRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA 621
              +   L  L      Q    +  V EY+  G L  H+               A I   
Sbjct: 76  LPGKPPFLTQL--HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG 133

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG 681
             L +L     +GII+RD+K  N++LD     K++DFG+ K    +     +    G+  
Sbjct: 134 --LFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN--IWDGVTTKTFCGTPD 186

Query: 682 YLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           Y+ PE    Q   +  D ++FGV+L+E++ 
Sbjct: 187 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 216

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 73.7 bits (181), Expect = 8e-14
 Identities = 46/271 (16%), Positives = 99/271 (36%), Gaps = 59/271 (21%)

Query: 453 REKSSDPKNNSPGWWPLFFHRGTLNSTANAKGSGTQYLKGSVALTRAGKRFTLAEIRVAT 512
             +++  + ++ G      H  + +     +       K + ++ R    + + +     
Sbjct: 3   SHEAAAAQQHNSG----TQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPD----- 53

Query: 513 NNFDESLMIGVGGFGKVFKG-EIEDCTLAAIKR-ANPQSEQGLAEFET--EIEMLSKLRH 568
             ++   +IG G +G V +  +  +  + AIK+      +    +     EI +L++L H
Sbjct: 54  -RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCK-RILREIAILNRLNH 111

Query: 569 RHLVSLI-----GFCDEQNEMILVYEYMANGTLRSHLFGSDL-------PPLTWK----- 611
            H+V ++        ++ +E+ +V E             SD          LT       
Sbjct: 112 DHVVKVLDIVIPKDVEKFDELYVVLEIA----------DSDFKKLFRTPVYLTELHIKTL 161

Query: 612 --QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS-----KTG 664
               L        G+ Y+H+    GI+HRD+K  N L++++   K+ DFGL+        
Sbjct: 162 LYNLL-------VGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPEN 211

Query: 665 PSMEHTHVSTAVKGSFGYLDPEYFWRQQLTE 695
            + +          +          ++QLT 
Sbjct: 212 GNSQLPISPREDDMNLVTFPHTKNLKRQLTG 242

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 72.6 bits (179), Expect = 9e-14
 Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 16/210 (7%)

Query: 509 RVATNNFDESLMIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLS 564
            +   +FD   +IG G + KV     K       +  +K+     ++ +   +TE  +  
Sbjct: 5   PLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 64

Query: 565 K-LRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA 621
           +   H  LV L      Q E  +  V EY+  G L  H+      P    +   A I  A
Sbjct: 65  QASNHPFLVGL--HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA 122

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG 681
             L+YLH   ERGII+RD+K  N+LLD     K++D+G+ K G  +     ++   G+  
Sbjct: 123 --LNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSTFCGTPN 175

Query: 682 YLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           Y+ PE    +      D ++ GV++FE++ 
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMA 205

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 72.3 bits (178), Expect = 1e-13
 Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 16/210 (7%)

Query: 509 RVATNNFDESLMIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLS 564
           R+  +NF+   ++G G FGKV     K   +   +  +K+     +  +    TE  +LS
Sbjct: 19  RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78

Query: 565 K-LRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA 621
               H  L  L  FC  Q    +  V E++  G L  H+  S        +   A I +A
Sbjct: 79  LARNHPFLTQL--FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISA 136

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG 681
             L +LH   ++GII+RD+K  N+LLD     K++DFG+ K G  + +   +    G+  
Sbjct: 137 --LMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG--ICNGVTTATFCGTPD 189

Query: 682 YLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           Y+ PE           D ++ GV+L+E++C
Sbjct: 190 YIAPEILQEMLYGPAVDWWAMGVLLYEMLC 219

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 72.9 bits (179), Expect = 1e-13
 Identities = 47/205 (22%), Positives = 81/205 (39%), Gaps = 58/205 (28%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKR-ANPQSEQGLAEFET---------EIEMLSKLRHR 569
           IG G +G V+   +       AIK+            FE          EI +L++L+  
Sbjct: 34  IGRGSYGYVYLAYDKNTEKNVAIKKVNRM--------FEDLIDCKRILREITILNRLKSD 85

Query: 570 HLVSLI-----GFCDEQNEMILVYEYMANGTLRSHLFGSDL-------PPLTWK------ 611
           +++ L          + +E+ +V E             SDL         LT +      
Sbjct: 86  YIIRLYDLIIPDDLLKFDELYIVLEIA----------DSDLKKLFKTPIFLTEEHIKTIL 135

Query: 612 -QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT 670
              L        G +++H     GIIHRD+K  N LL+++   K+ DFGL++T  S + T
Sbjct: 136 YNLL-------LGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDT 185

Query: 671 HVSTAVKGSFGYLDPEYFWRQQLTE 695
           ++   ++ +          ++QLT 
Sbjct: 186 NIVNDLEENEEPGPHNKNLKKQLTS 210

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 72.4 bits (178), Expect = 1e-13
 Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 36/224 (16%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKR-ANPQSEQGLAEFET--EIEMLSKLRHRHLVSLI- 575
           +G G +G V    + +     A+K+ + P      A+  T  E+ +L  ++H +++ L+ 
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLD 95

Query: 576 -----GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL-DACIG-----AARGL 624
                   +E N++ LV   M          G+DL  +   Q+L D  +        RGL
Sbjct: 96  VFTPARSLEEFNDVYLVTHLM----------GADLNNIVKCQKLTDDHVQFLIYQILRGL 145

Query: 625 HYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLD 684
            Y+H+     IIHRD+K +N+ ++E+   K+ DFGL++        +V+T       Y  
Sbjct: 146 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRW-----YRA 197

Query: 685 PE-YFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
           PE         +  D++S G ++ E++  R +   T   DQ+ L
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 71.9 bits (177), Expect = 2e-13
 Identities = 59/222 (26%), Positives = 89/222 (40%), Gaps = 40/222 (18%)

Query: 509 RVATNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIK-------RANPQSEQGLAEFETEI 560
               ++F    +IG G FGKV       +    A+K           + +  ++E    +
Sbjct: 34  HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSE--RNV 91

Query: 561 EMLSKLRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRL---- 614
            +L  ++H  LV L      Q    +  V +Y+  G L  HL           QR     
Sbjct: 92  -LLKNVKHPFLVGL--HFSFQTADKLYFVLDYINGGELFYHL-----------QRERCFL 137

Query: 615 --DACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH 669
              A   AA     L YLH      I++RD+K  NILLD      ++DFGL K    +EH
Sbjct: 138 EPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN--IEH 192

Query: 670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
              ++   G+  YL PE   +Q      D +  G VL+E++ 
Sbjct: 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLY 234

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 72.0 bits (177), Expect = 2e-13
 Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 16/210 (7%)

Query: 509 RVATNNFDESLMIGVGGFGKVF----KGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLS 564
            +   +FD   +IG G + KV     K       +  +K+     ++ +   +TE  +  
Sbjct: 48  SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFE 107

Query: 565 K-LRHRHLVSLIGFCDEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA 621
           +   H  LV L      Q E  +  V EY+  G L  H+      P    +   A I  A
Sbjct: 108 QASNHPFLVGL--HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA 165

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFG 681
             L+YLH   ERGII+RD+K  N+LLD     K++D+G+ K G  +     ++   G+  
Sbjct: 166 --LNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSTFCGTPN 218

Query: 682 YLDPEYFWRQQLTEKSDVYSFGVVLFEVVC 711
           Y+ PE    +      D ++ GV++FE++ 
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMA 248

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 71.1 bits (175), Expect = 2e-13
 Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 39/176 (22%)

Query: 521 IGVGGFGKVFKGEIEDCT--LAAIKRANPQSEQGLAEFE----T---EIEMLSKLR---H 568
           IG G +GKVFK           A+KR   Q+ +     E    +   E+ +L  L    H
Sbjct: 19  IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-----EGMPLSTIREVAVLRHLETFEH 73

Query: 569 RHLVSLI-----GFCDEQNEMILVYEYMAN--GTLRSHLFGSDLPPLTWK----QRLDAC 617
            ++V L         D + ++ LV+E++     T    +    +P  T K    Q L   
Sbjct: 74  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL--- 130

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHV 672
               RGL +LH      ++HRD+K  NIL+  +   K++DFGL++     M  T V
Sbjct: 131 ----RGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 179

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 71.2 bits (175), Expect = 3e-13
 Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 42/164 (25%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFET---------EIEMLSKLRHRH 570
           IG G +G V    +  +    AIK+ +P        FE          EI++L + RH +
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISP--------FEHQTYCQRTLREIKILLRFRHEN 86

Query: 571 LVSLI-----GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA------CIG 619
           ++ +         ++  ++ +V + M           +DL  L   Q L           
Sbjct: 87  IIGINDIIRAPTIEQMKDVYIVQDLM----------ETDLYKLLKTQHLSNDHICYFLYQ 136

Query: 620 AARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT 663
             RGL Y+H+     ++HRD+K +N+LL+     K+ DFGL++ 
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV 177

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 70.8 bits (174), Expect = 4e-13
 Identities = 57/303 (18%), Positives = 111/303 (36%), Gaps = 50/303 (16%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKR-ANPQSEQGLAEFET--EIEMLSKLRHRHLVSLI- 575
           +G G +G V    +       AIK+ + P   +  A+     E+ +L  ++H +++ L+ 
Sbjct: 32  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAK-RAYRELLLLKHMQHENVIGLLD 90

Query: 576 -----GFCDEQNEMILVYEYMA---NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYL 627
                       +  LV  +M       +        +  L + Q L       +GL Y+
Sbjct: 91  VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVY-QML-------KGLKYI 142

Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVKGSFGYLDPE 686
           H+    G++HRD+K  N+ ++E+   K+ DFGL++     M   +V T       Y  PE
Sbjct: 143 HSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG-YVVTRW-----YRAPE 193

Query: 687 -YFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
                    +  D++S G ++ E++  + +       DQ+              ++ + D
Sbjct: 194 VILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND 253

Query: 746 PHLK------GNYSPESL-EKFGEIAEKCLD--------DEGKNRPTMGEVLWHLEYVLQ 790
              K           +   + F   + +  D        D  K R T  + L H  +   
Sbjct: 254 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK-RLTAAQALTH-PFFEP 311

Query: 791 LHE 793
             +
Sbjct: 312 FRD 314

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 71.4 bits (175), Expect = 4e-13
 Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 44/229 (19%)

Query: 559 EIEMLSKLRHRHLVSLI------GFCDEQNEMILVYEYMA---NGTLRSHLFGSDLPPLT 609
           E+ ++  + H++++SL+         +E  ++ LV E M       ++  L    +  L 
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL 170

Query: 610 WKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH 669
           + Q L        G+ +LH+    GIIHRD+K +NI++  +   K+ DFGL++T  +   
Sbjct: 171 Y-QML-------CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 219

Query: 670 T--HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
              +V T       Y  PE        E  D++S G ++ E+V  + +       DQ N 
Sbjct: 220 MTPYVVTRY-----YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274

Query: 728 ADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRP 776
                          +I+    G   PE ++K        +++  K   
Sbjct: 275 ---------------VIE--QLGTPCPEFMKKLQPTVRNYVENRPKYAG 306

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 70.4 bits (173), Expect = 5e-13
 Identities = 50/244 (20%), Positives = 91/244 (37%), Gaps = 65/244 (26%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFET---------EIEMLSKLRHRH 570
           +G G +G V          + AIK+  P        F+          EI++L   +H +
Sbjct: 19  LGEGAYGVVCSATHKPTGEIVAIKKIEP--------FDKPLFALRTLREIKILKHFKHEN 70

Query: 571 LVSLI-----GFCDEQNEMILVYEYMANGTLRSHLFGSDL------PPLTWK-------Q 612
           ++++         +  NE+ ++ E M           +DL        L+         Q
Sbjct: 71  IITIFNIQRPDSFENFNEVYIIQELM----------QTDLHRVISTQMLSDDHIQYFIYQ 120

Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV 672
            L       R +  LH      +IHRD+K +N+L++ N   K+ DFGL++        + 
Sbjct: 121 TL-------RAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170

Query: 673 STAVKGSF--GYLD------PEY-FWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
               + S    ++       PE      + +   DV+S G +L E+   R +      + 
Sbjct: 171 EPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230

Query: 724 QINL 727
           Q+ L
Sbjct: 231 QLLL 234

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 70.5 bits (173), Expect = 6e-13
 Identities = 57/315 (18%), Positives = 112/315 (35%), Gaps = 63/315 (20%)

Query: 520 MIGVGGFGKVFKGE-IEDCTLAAIK--RANPQ-SEQGLAEFETEIEMLSKLR-------- 567
            +G G F  V+  + + + T  A+K  R +   +E        EI++L ++         
Sbjct: 26  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAE----DEIKLLQRVNDADNTKED 81

Query: 568 ---HRHLVSLIGFCDEQNE----MILVYEYMANGTLRSHLFGSDLPPLTW-------KQR 613
                H++ L+   + +      +++V+E +    L + +   +   +         KQ 
Sbjct: 82  SMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQL 140

Query: 614 LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE------NFVAKMSDFGLSKTGPSM 667
           L         L Y+H     GIIH D+K  N+L++           K++D G +      
Sbjct: 141 LLG-------LDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA----CW 187

Query: 668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL 727
              H + +++    Y  PE          +D++S   ++FE++    +  P         
Sbjct: 188 YDEHYTNSIQTRE-YRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246

Query: 728 ADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY 787
            D          +  II+  L G      L   G+      +  G  R       W LE 
Sbjct: 247 DD---------HIAQIIE--LLGELPSYLLRN-GKYTRTFFNSRGLLRNISKLKFWPLED 294

Query: 788 VLQLHEAWMRTDDRQ 802
           VL     + + + ++
Sbjct: 295 VLTEKYKFSKDEAKE 309

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 70.0 bits (172), Expect = 8e-13
 Identities = 69/311 (22%), Positives = 119/311 (38%), Gaps = 65/311 (20%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKR-ANPQSEQGLAEFET---------EIEMLSKLRHR 569
           +G G +G V    +       AIK+   P        F++         E+ +L  +RH 
Sbjct: 33  VGSGAYGAVCSAVDGRTGAKVAIKKLYRP--------FQSELFAKRAYRELRLLKHMRHE 84

Query: 570 HLVSLI------GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL-DACIG--- 619
           +++ L+         D+  +  LV  +M          G+DL  L   ++L +  I    
Sbjct: 85  NVIGLLDVFTPDETLDDFTDFYLVMPFM----------GTDLGKLMKHEKLGEDRIQFLV 134

Query: 620 --AARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
               +GL Y+H     GIIHRD+K  N+ ++E+   K+ DFGL++   S    +V T   
Sbjct: 135 YQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRW- 190

Query: 678 GSFGYLDPEY-FWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK 736
               Y  PE      + T+  D++S G ++ E++  + +   +   DQ+           
Sbjct: 191 ----YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP 246

Query: 737 QRSLKSIIDPHLK------GNYSPESLEKFGEIA--------EKCLDDEGKNRPTMGEVL 782
              ++ +     K           +        A        EK L  + + R T GE L
Sbjct: 247 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEAL 306

Query: 783 WHLEYVLQLHE 793
            H  Y   LH+
Sbjct: 307 AH-PYFESLHD 316

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 68.5 bits (168), Expect = 2e-12
 Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 45/228 (19%)

Query: 509 RVATNNFDESLMIGVGGFGKVF----KGEIEDCTLAAIK--------RANPQSEQGLAEF 556
           +V   NF+   ++G G +GKVF        +   L A+K        +    +E      
Sbjct: 50  KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTR--- 106

Query: 557 ETEIEMLSKLRHRH-LVSLIGFCDEQNE--MILVYEYMANGTLRSHL-----FGSDLPPL 608
            TE ++L  +R    LV+L      Q E  + L+ +Y+  G L +HL     F       
Sbjct: 107 -TERQVLEHIRQSPFLVTL--HYAFQTETKLHLILDYINGGELFTHLSQRERFTEH---- 159

Query: 609 TWKQRLDACIGAAR---GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP 665
                 +  I        L +LH   + GII+RD+K  NILLD N    ++DFGLSK   
Sbjct: 160 ------EVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210

Query: 666 SMEHTHVSTAVKGSFGYLDPE--YFWRQQLTEKSDVYSFGVVLFEVVC 711
           + E         G+  Y+ P+          +  D +S GV+++E++ 
Sbjct: 211 ADETERAYDFC-GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 257

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 68.5 bits (168), Expect = 2e-12
 Identities = 68/348 (19%), Positives = 123/348 (35%), Gaps = 77/348 (22%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGF-- 577
            G G FG V  G E       AIK+          E +  ++ L+ L H ++V L  +  
Sbjct: 31  AGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQ-IMQDLAVLHHPNIVQLQSYFY 89

Query: 578 ---CDEQNEM--ILVYEYMANGTL----RSH-LFGSDLPPLTWK----QRLDACIGAARG 623
                ++ ++   +V EY+   TL    R++       PP+  K    Q +       R 
Sbjct: 90  TLGERDRRDIYLNVVMEYV-PDTLHRCCRNYYRRQVAPPPILIKVFLFQLI-------RS 141

Query: 624 LHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKT-GPSMEHTH-VST----A- 675
           +  LH  +   + HRD+K  N+L++  +   K+ DFG +K   PS  +   + +    A 
Sbjct: 142 IGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAP 200

Query: 676 --VKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV------------INPTL- 720
             + G+  Y           T   D++S G +  E++    +            I   L 
Sbjct: 201 ELIFGNQHY-----------TTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG 249

Query: 721 --PKDQI-----NLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGK 773
              ++ +     +  D  +   K     ++         + E+     ++    L    +
Sbjct: 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVF-SDHSLKDAKEAY----DLLSALLQYLPE 304

Query: 774 NRPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEFAEREAED 821
            R    E L H  Y  +LH+         N+    + L  F   E E 
Sbjct: 305 ERMKPYEALCH-PYFDELHDP---ATKLPNNKDLPEDLFRFLPNEIEV 348

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 67.0 bits (164), Expect = 7e-12
 Identities = 65/350 (18%), Positives = 130/350 (37%), Gaps = 106/350 (30%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKR-ANPQSEQGLAEFET---------EIEMLSKLR-H 568
           +G G +G V+K  +     + A+K+  +         F+          EI +L++L  H
Sbjct: 17  LGKGAYGIVWKSIDRRTGEVVAVKKIFDA--------FQNSTDAQRTFREIMILTELSGH 68

Query: 569 RHLVSL--IGFCDEQNEMILVYEYMANGTLRSHLFGSDL------PPLTWK-------QR 613
            ++V+L  +   D   ++ LV++YM           +DL        L          Q 
Sbjct: 69  ENIVNLLNVLRADNDRDVYLVFDYM----------ETDLHAVIRANILEPVHKQYVVYQL 118

Query: 614 LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS 673
           +       + + YLH+G   G++HRD+K +NILL+     K++DFGLS++  ++     +
Sbjct: 119 I-------KVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNN 168

Query: 674 TAVKGSFGYLDP--------EY----FWR--------QQLTEKSDVYSFGVVLFEVVCAR 713
             +  +    +         +Y    ++R         + T+  D++S G +L E++C +
Sbjct: 169 IPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228

Query: 714 AVINPTLPKDQINL-----------------ADWAMKWQKQRSLKSIIDPHLKGNYSPES 756
            +   +   +Q+                   + +A    +    K  I    K +   + 
Sbjct: 229 PIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKW 288

Query: 757 LEKFGEIA-------------EKCLDDEGKNRPTMGEVLWHLEYVLQLHE 793
                +I              +K L      R +  + L H  +V   H 
Sbjct: 289 KNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKH-PFVSIFHN 337

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 62.3 bits (152), Expect = 2e-10
 Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 36/177 (20%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLI---- 575
           +G GG G VF   + +     AIK+      Q +     EI+++ +L H ++V +     
Sbjct: 19  LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78

Query: 576 ----------GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRL-DACIG----- 619
                     G   E N + +V EYM           +DL  +  +  L +         
Sbjct: 79  PSGSQLTDDVGSLTELNSVYIVQEYM----------ETDLANVLEQGPLLEEHARLFMYQ 128

Query: 620 AARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKT-GPSMEHTHVST 674
             RGL Y+H+     ++HRD+K  N+ ++ E+ V K+ DFGL++   P   H    +
Sbjct: 129 LLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 61.5 bits (150), Expect = 2e-10
 Identities = 36/162 (22%), Positives = 63/162 (38%), Gaps = 39/162 (24%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFC 578
           +G+G  GKV +          A+K           +   E+E+  +  +  H+V ++   
Sbjct: 26  LGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVY 80

Query: 579 DE----QNEMILVYEYMANGTL------RSHLF-----GSDLPPLTWKQRLDACIGAARG 623
           +     +  +++V E +  G L      R          S++     K   +A       
Sbjct: 81  ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI----MKSIGEA------- 129

Query: 624 LHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSK 662
           + YLH      I HRDVK  N+L      N + K++DFG +K
Sbjct: 130 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 61.4 bits (148), Expect = 4e-10
 Identities = 34/201 (16%), Positives = 55/201 (27%), Gaps = 53/201 (26%)

Query: 510 VATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIK--------RANPQSEQGLAEFETEIE 561
           + T        IG G FG+VF+  I D T  AIK          N   ++   E   EI 
Sbjct: 17  LPTEKLQRCEKIGEGVFGEVFQT-IADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEII 75

Query: 562 MLSKL---------RHRHLVSLIGFCDEQ------------------------------N 582
           +  +L         R    + L      Q                              +
Sbjct: 76  ISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDD 135

Query: 583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT 642
           ++ +V E+   G     +        +              L            HRD+  
Sbjct: 136 QLFIVLEFEFGGIDLEQMRTK---LSSLATAKSILHQLTASLAVAEA--SLRFEHRDLHW 190

Query: 643 TNILLDENFVAKMSDFGLSKT 663
            N+LL +  + K+      K+
Sbjct: 191 GNVLLKKTSLKKLHYTLNGKS 211

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 59.7 bits (145), Expect = 2e-09
 Identities = 46/243 (18%), Positives = 86/243 (35%), Gaps = 78/243 (32%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGF-- 577
           +G G FG V +  +IE     A+K+              E++++  L H +++ L+ +  
Sbjct: 15  LGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN----RELDIMKVLDHVNIIKLVDYFY 70

Query: 578 ------------------------------------CDEQNEMILVYEYMA---NGTLRS 598
                                                 +   + ++ EY+    +  L+S
Sbjct: 71  TTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKS 130

Query: 599 HL-FGSDLPPLTWK----QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFV 652
            +  G  +P         Q         R + ++H+    GI HRD+K  N+L++ ++  
Sbjct: 131 FIRSGRSIPMNLISIYIYQLF-------RAVGFIHSL---GICHRDIKPQNLLVNSKDNT 180

Query: 653 AKMSDFGLSK-TGPSMEHTH-VST----AVKGSFGYLDPE-YFWRQQLTEKSDVYSFGVV 705
            K+ DFG +K   PS      + +    A         PE      + T   D++S G V
Sbjct: 181 LKLCDFGSAKKLIPSEPSVAYICSRFYRA---------PELMLGATEYTPSIDLWSIGCV 231

Query: 706 LFE 708
             E
Sbjct: 232 FGE 234

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 59.9 bits (144), Expect = 4e-09
 Identities = 89/600 (14%), Positives = 175/600 (29%), Gaps = 186/600 (31%)

Query: 322 EKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQLGPDTAVG 381
                R+F   ++ +  E     FV+         R  +  + S I+T   Q    T + 
Sbjct: 61  VSGTLRLFWTLLSKQ--EEMVQKFVE------EVLRINYKFLMSPIKTEQRQPSMMTRMY 112

Query: 382 AAGTDALLNGLEIF-KFSQNGNLASVERFDSSGNPVGH---------SNKWILLVG-IGA 430
               D L N  ++F K+       +V R      P              K +L+ G +G+
Sbjct: 113 IEQRDRLYNDNQVFAKY-------NVSRLQ----PYLKLRQALLELRPAKNVLIDGVLGS 161

Query: 431 GIASVVVLAVIFALLFCYCKNWREKSSDPKNNSPGWW--------------PL--FFHRG 474
           G  + V L V        C +++ +    K +   +W               L    ++ 
Sbjct: 162 G-KTWVALDV--------CLSYKVQC---KMDFKIFWLNLKNCNSPETVLEMLQKLLYQI 209

Query: 475 TLNSTANAKGSGTQYLKGSVALTRAGKRFTLAEIRVATNNFDESLMI--GV--GGFGKVF 530
             N T+ +  S    L+  +   +A  R  L         ++  L++   V        F
Sbjct: 210 DPNWTSRSDHSSNIKLR--IHSIQAELRRLLKS-----KPYENCLLVLLNVQNAKAWNAF 262

Query: 531 KGEIEDCT-------------LAAIKRANPQSEQ---GLAEFETEIEMLSK--------L 566
                 C              L+A    +   +     L   E +  +L K        L
Sbjct: 263 NLS---CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK-SLLLKYLDCRPQDL 318

Query: 567 RHR------HLVSLIG-FCDEQNEMILVYEYMANGTLRSHLFGS--DLPPLTWKQRLDAC 617
                      +S+I     +       ++++    L + +  S   L P  +++  D  
Sbjct: 319 PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL 378

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILL-----------DENFVAKMSDFGLSKTGPS 666
                            +         ILL               V K+  + L +  P 
Sbjct: 379 ----------------SVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK 422

Query: 667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN 726
                + +       YL+     + +L  +  ++            R+++      D  N
Sbjct: 423 ESTISIPS------IYLE----LKVKLENEYALH------------RSIV------DHYN 454

Query: 727 LADWAMKWQKQRSLKSIIDP--------HLKGNYSPESLEKFGEIAEKCLDD---EGKNR 775
           +      +     +   +D         HLK     E  E+        LD    E K R
Sbjct: 455 IPK---TFDSDDLIPPYLDQYFYSHIGHHLKN---IEHPERMTLFRMVFLDFRFLEQKIR 508

Query: 776 PT------MGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQALGEFAEREAEDGQDAPTTD 829
                    G +L +    L+ ++ ++  +D +       A+ +F  +  E+   +  TD
Sbjct: 509 HDSTAWNASGSIL-NTLQQLKFYKPYICDNDPKYE-RLVNAILDFLPKIEENLICSKYTD 566

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 2e-04
 Identities = 46/364 (12%), Positives = 101/364 (27%), Gaps = 86/364 (23%)

Query: 67  SGDSIYEPLYKTARVFADGL--NYTF------------EIIAGNYIV---RLHFCPFPFE 109
             + + +      +   + L  NY F             ++   YI    RL+     F 
Sbjct: 74  KQEEMVQ------KFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA 127

Query: 110 DYNVN-KSSFGVVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGVDLDK 168
            YNV+    +  +   L  L           +N+ +    G+  +  +  +    V L  
Sbjct: 128 KYNVSRLQPYLKLRQALLELR--------PAKNVLIDGVLGSGKT-WVALD----VCLSY 174

Query: 169 LMIEFIPSKG---SFGFINAIE-IVPVVDKLFAD-TINKVGGNDVNFNLSGRGVETMYRL 223
            +   +  K    +    N+ E ++ ++ KL      N    +D + N+  R       L
Sbjct: 175 KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234

Query: 224 N--VGGPEIKPS-------RDPDLWRMWEADSSYMITANAGSEIRNSSNITYASTNDSSV 274
              +     +         ++   W  +      ++T       R      + S   ++ 
Sbjct: 235 RRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT------RFKQVTDFLSAATTTH 288

Query: 275 APLLVYETARTMSNT-EVLEKRFNMSWK------FEVDPNFDYFVRLH---FCELVYEKA 324
             L  +    T      +L K  +   +         +P              E + +  
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP-------RRLSIIAESIRDGL 341

Query: 325 NQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFD--AV---SSKI-----ETLWIQL 374
                  ++N        +  +         +R  FD  +V   S+ I       +W  +
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNV--LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDV 399

Query: 375 GPDT 378
               
Sbjct: 400 IKSD 403

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 58.2 bits (141), Expect = 5e-09
 Identities = 50/208 (24%), Positives = 82/208 (39%), Gaps = 39/208 (18%)

Query: 520 MIGVGGFGKVFKGE-IEDCTLAAIK--RANPQ-SEQGLAEFETEIEMLSKLRHR------ 569
           +IG G FG+V K    +     A+K  R   +   Q       EI +L  LR +      
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAA----EEIRILEHLRKQDKDNTM 159

Query: 570 HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTW-------KQRLDACIGAAR 622
           +++ ++     +N + + +E ++   L   +  +     +           L        
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQC------ 212

Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVA--KMSDFGLSKTGPSMEHTHVSTAVKGSF 680
            L  LH   +  IIH D+K  NILL +   +  K+ DFG S      EH  V T ++  F
Sbjct: 213 -LDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYTYIQSRF 264

Query: 681 GYLDPEYFWRQQLTEKSDVYSFGVVLFE 708
            Y  PE     +     D++S G +L E
Sbjct: 265 -YRAPEVILGARYGMPIDMWSLGCILAE 291

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 56.6 bits (137), Expect = 1e-08
 Identities = 48/201 (23%), Positives = 76/201 (37%), Gaps = 23/201 (11%)

Query: 520 MIGVGGFGKVFKGE-IEDCTLAAIK--RANPQ-SEQGLAEFETEIEMLSKLRHR------ 569
           +IG G FG+V K     +    AIK  +       Q       E+ +L  +         
Sbjct: 61  LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQ----IEVRLLELMNKHDTEMKY 116

Query: 570 HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHT 629
           ++V L      +N + LV+E ++   L   L  ++   ++              L +L T
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 175

Query: 630 GAERGIIHRDVKTTNILL--DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY 687
             E  IIH D+K  NILL   +    K+ DFG S          +   ++  F Y  PE 
Sbjct: 176 -PELSIIHCDLKPENILLCNPKRSAIKIVDFGSS----CQLGQRIYQYIQSRF-YRSPEV 229

Query: 688 FWRQQLTEKSDVYSFGVVLFE 708
                     D++S G +L E
Sbjct: 230 LLGMPYDLAIDMWSLGCILVE 250

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 54.3 bits (131), Expect = 5e-08
 Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 15/162 (9%)

Query: 507 EIRVATNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSK 565
           E+RV  N +     IG G FG ++ G  I      AIK    +++      E   ++   
Sbjct: 4   ELRVG-NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIE--SKIYKM 60

Query: 566 LRH-RHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGL 624
           ++    + ++     E +  ++V E +  G     LF       + K  L         +
Sbjct: 61  MQGGVGIPTIRWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSLKTVLLLADQMISRI 118

Query: 625 HYLHTGAERGIIHRDVKTTNILL----DENFVAKMSDFGLSK 662
            Y+H    +  IHRDVK  N L+      N V  + DFGL+K
Sbjct: 119 EYIH---SKNFIHRDVKPDNFLMGLGKKGNLVY-IIDFGLAK 156

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 53.9 bits (129), Expect = 1e-07
 Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 15/162 (9%)

Query: 507 EIRVATNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSK 565
           E RV  N F     IG G FG+++ G  I+     AIK  N +++     +E   ++   
Sbjct: 2   EPRVG-NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYE--SKIYRI 58

Query: 566 LR-HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGL 624
           L+    + ++  F  E +  +LV + +  G     LF      L+ K  L         +
Sbjct: 59  LQGGTGIPNVRWFGVEGDYNVLVMDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRV 116

Query: 625 HYLHTGAERGIIHRDVKTTNILL----DENFVAKMSDFGLSK 662
            ++H    +  +HRD+K  N L+      N V  + DFGL+K
Sbjct: 117 EFVH---SKSFLHRDIKPDNFLMGLGRRANQVY-IIDFGLAK 154

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 53.1 bits (128), Expect = 1e-07
 Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 16/150 (10%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRH-RHLVSLIGFC 578
           IG G FG +F+G  + +    AIK    +S+      E        L     + ++  F 
Sbjct: 18  IGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDE--YRTYKLLAGCTGIPNVYYFG 75

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
            E    +LV + +  G     L        + K    A       +  +H   E+ +++R
Sbjct: 76  QEGLHNVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYR 130

Query: 639 DVKTTNILL------DENFVAKMSDFGLSK 662
           D+K  N L+      + N +  + DFG+ K
Sbjct: 131 DIKPDNFLIGRPNSKNANMIY-VVDFGMVK 159

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 51.2 bits (123), Expect = 7e-07
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 17/167 (10%)

Query: 504 TLAEIRVATNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEM 562
           ++  + V   NF     IG G FG++  G+ +      AIK    +S       E     
Sbjct: 1   SMGVLMVG-PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLE--YRF 57

Query: 563 LSKLRH-RHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA 621
             +L     +  +  F        +V E +  G     LF       + K  L   I   
Sbjct: 58  YKQLGSGDGIPQVYYFGPCGKYNAMVLELL--GPSLEDLFDLCDRTFSLKTVLMIAIQLI 115

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILL------DENFVAKMSDFGLSK 662
             + Y+H    + +I+RDVK  N L+       +  +  + DF L+K
Sbjct: 116 SRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVI-HIIDFALAK 158

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 50.8 bits (122), Expect = 1e-06
 Identities = 49/230 (21%), Positives = 80/230 (34%), Gaps = 65/230 (28%)

Query: 520 MIGVGGFGKVFKG--EIEDCTLAAIK--RANPQ-SEQGLAEFETEIEMLSKLRHR----- 569
            +G G FGKV +        +  A+K  R   +  E        EI +L K++ +     
Sbjct: 26  NLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAAR----LEINVLKKIKEKDKENK 81

Query: 570 -HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTW-------KQRLDACIGAA 621
              V +  + +    M + +E +        L  ++  P           Q   A     
Sbjct: 82  FLCVLMSDWFNFHGHMCIAFELLGK-NTFEFLKENNFQPYPLPHVRHMAYQLCHA----- 135

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVA-------------------KMSDFGLSK 662
             L +LH   E  + H D+K  NIL   +                      +++DFG + 
Sbjct: 136 --LRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA- 189

Query: 663 TGPSMEHTHVSTAVKGSFGYLDPE----YFWRQQLTEKSDVYSFGVVLFE 708
              + +H H +T V     Y  PE      W     +  DV+S G +LFE
Sbjct: 190 ---TFDHEHHTTIVATRH-YRPPEVILELGW----AQPCDVWSIGCILFE 231

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 50.0 bits (120), Expect = 2e-06
 Identities = 64/339 (18%), Positives = 112/339 (33%), Gaps = 98/339 (28%)

Query: 520 MIGVGGFGKVFKGE-IEDCTLAAIK--RANPQ-SEQGLAEFETEIEMLSKLRHR-----H 570
            +G G FG+V   + I++    A+K  R   + +         E ++L K+++      +
Sbjct: 42  KMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAK----IEADILKKIQNDDINNNN 97

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTW-------KQRLDACIGAARG 623
           +V   G     + M L++E +   +L   +  ++              + L A       
Sbjct: 98  IVKYHGKFMYYDHMCLIFEPLGP-SLYEIITRNNYNGFHIEDIKLYCIEILKA------- 149

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV--STAVK---- 677
           L+YL    +  + H D+K  NILLD+ +  K        T       +   ST +K    
Sbjct: 150 LNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDF 206

Query: 678 GSFGYLD--------------PE------YFWRQQLTEKSDVYSFGVVLFE--------- 708
           G   +                PE      +         SD++SFG VL E         
Sbjct: 207 GCATFKSDYHGSIINTRQYRAPEVILNLGW------DVSSDMWSFGCVLAELYTGSLLFR 260

Query: 709 -------VVCARAVINPTLPKDQINLA----------------DWAMKWQKQRSLKSIID 745
                  +    ++I P +PK+ +  A                 W        S+K +  
Sbjct: 261 THEHMEHLAMMESIIQP-IPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHV-- 317

Query: 746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                 Y     E F +     L  +   RP+  E+L H
Sbjct: 318 KKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKH 356

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 49.5 bits (118), Expect = 3e-06
 Identities = 61/381 (16%), Positives = 102/381 (26%), Gaps = 129/381 (33%)

Query: 520 MIGVGGFGKVFKGE-IEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLR--------H 568
            +G G F  V+    I+     A+K  ++     +       EI +L  +R         
Sbjct: 44  KLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETA---LDEIRLLKSVRNSDPNDPNR 100

Query: 569 RHLVSLIG-----------FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDAC 617
             +V L+             C       +V+E + +  L   +  S+   L         
Sbjct: 101 EMVVQLLDDFKISGVNGTHIC-------MVFEVLGH-HLLKWIIKSNYQGLPLPCVKKII 152

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILL------------------------------ 647
               +GL YLHT  +  IIH D+K  NILL                              
Sbjct: 153 QQVLQGLDYLHT--KCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAV 210

Query: 648 -------------------DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
                               E    K++D G +        T           Y   E  
Sbjct: 211 STAPATAGNFLVNPLEPKNAEKLKVKIADLGNA-CWVHKHFTEDIQTR----QYRSLEVL 265

Query: 689 WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN----LA-----------DWAMK 733
                   +D++S   + FE+     +  P   ++       +A              + 
Sbjct: 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVA 325

Query: 734 WQKQR-------SLKSIIDPHL---------KGNYSPESLEKFGEIAEKCLDDEGKNRPT 777
            +  +        LK I              K  +S E    F +     L+   + R T
Sbjct: 326 GKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRAT 385

Query: 778 MGEVLWHLEYVLQLHEAWMRT 798
             E L H          W+ +
Sbjct: 386 AAECLRH---------PWLNS 397

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 49.0 bits (117), Expect = 3e-06
 Identities = 25/181 (13%), Positives = 54/181 (29%), Gaps = 60/181 (33%)

Query: 521 IGVGGFGKVFKGE---------IEDCTLAAIK--RANPQ--SEQGLAEFETEIEMLSKLR 567
                 G +++                  ++K    + +  +EQ   +   +   ++K +
Sbjct: 50  QTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWK 109

Query: 568 HRHLVSLIGF-------CDEQNEMILVYEYMANGTLRSHLFGSDL---------PPLTWK 611
             +   L+           +     LV              G  L           L+ +
Sbjct: 110 KLYSTPLLAIPTCMGFGVHQDKYRFLVLP----------SLGRSLQSALDVSPKHVLSER 159

Query: 612 -------QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLS 661
                  + LDA       L +LH   E   +H +V   NI +   D++ V  ++ +G +
Sbjct: 160 SVLQVACRLLDA-------LEFLH---ENEYVHGNVTAENIFVDPEDQSQV-TLAGYGFA 208

Query: 662 K 662
            
Sbjct: 209 F 209

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 48.4 bits (116), Expect = 5e-06
 Identities = 43/233 (18%), Positives = 79/233 (33%), Gaps = 71/233 (30%)

Query: 520 MIGVGGFGKVFKG--EIEDCTLAAIK--RANPQ-SEQGLAEFETEIEMLSKLRHR----- 569
            +G G FGKV +           A+K  +   +  E       +EI++L  L        
Sbjct: 21  TLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAAR----SEIQVLEHLNTTDPNST 76

Query: 570 -HLVSLIGFCDEQNEMILVYEYM-ANGTLRSHLFGSDLPPLTW-------KQRLDACIGA 620
              V ++ + +    + +V+E +  +      +  +   P           Q   +    
Sbjct: 77  FRCVQMLEWFEHHGHICIVFELLGLS--TYDFIKENGFLPFRLDHIRKMAYQICKS---- 130

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLDENFVA-------------------KMSDFGLS 661
              +++LH      + H D+K  NIL  ++                      K+ DFG +
Sbjct: 131 ---VNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184

Query: 662 KTGPSMEHTHVSTAVKGSFGYLDPE------YFWRQQLTEKSDVYSFGVVLFE 708
               + +  H ST V     Y  PE      +      ++  DV+S G +L E
Sbjct: 185 ----TYDDEHHSTLVSTRH-YRAPEVILALGW------SQPCDVWSIGCILIE 226

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 46.3 bits (110), Expect = 3e-05
 Identities = 29/173 (16%), Positives = 62/173 (35%), Gaps = 44/173 (25%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIK---------RANPQ--SEQGLAEFETEIEMLSKLRHR 569
           IG GGFG ++  ++                    N    +E    +   + E + K    
Sbjct: 43  IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102

Query: 570 HLVSLIGFC----------DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWK-------Q 612
             +  +G            + ++   ++ +    G+    ++ ++    + K       +
Sbjct: 103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF--GSDLQKIYEANAKRFSRKTVLQLSLR 160

Query: 613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSK 662
            LD        L Y+H   E   +H D+K +N+LL   + + V  + D+GL+ 
Sbjct: 161 ILDI-------LEYIH---EHEYVHGDIKASNLLLNYKNPDQV-YLVDYGLAY 202

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 45.1 bits (107), Expect = 6e-05
 Identities = 34/178 (19%), Positives = 58/178 (32%), Gaps = 57/178 (32%)

Query: 521 IGVGGFGKVFKGE----IEDCTLAAIKRANPQSEQGLAEFETEI-----EMLSKLRHRHL 571
           IG GGFG ++        E      +K    ++    +E +        + + K   R  
Sbjct: 45  IGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQ 104

Query: 572 VSLIGF----------CDEQNEMILVYEYMANGTLRSHLFGSDL-------PPLTWK--- 611
           +  +G              ++   +V E            G DL                
Sbjct: 105 LDYLGIPLFYGSGLTEFKGRSYRFMVME----------RLGIDLQKISGQNGTFKKSTVL 154

Query: 612 ----QRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSK 662
               + LD        L Y+H   E   +H D+K  N+LL   + + V  ++D+GLS 
Sbjct: 155 QLGIRMLDV-------LEYIH---ENEYVHGDIKAANLLLGYKNPDQV-YLADYGLSY 201

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	851
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.94
2jwp_A	174	Malectin, MGC80075; sugar binding, sugar binding p	99.93
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.91
2jwp_A	174	Malectin, MGC80075; sugar binding, sugar binding p	99.89
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.86
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.73
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.55
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.19
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.05
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.91
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.79
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.39
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.37
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.25
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.22
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.16
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.1
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.66
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.61
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.57
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.39
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.15
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	96.85
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	96.66
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	96.63
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	96.56
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	96.54
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	96.54
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	96.41
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	96.31
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	96.24
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	95.36
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	95.21
3mes_A	424	Choline kinase; malaria, structural genomics, stru	93.34
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	87.46
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	82.7

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=5.7e-53  Score=462.11  Aligned_cols=261  Identities=29%  Similarity=0.443  Sum_probs=212.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      ++|...++||+|+||+||+|++.      +++.||||++...+....++|.+|+++|++++|||||+++|+|.+++.++|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            56778889999999999999874      367899999988888888899999999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCC-------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeE
Q 047215          587 VYEYMANGTLRSHLFGSD-------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA  653 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~  653 (851)
                      |||||++|+|.++|+...             ..+++|.++++|+.|+|+||+|||+   ++||||||||+||||++++.+
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcE
Confidence            999999999999996532             2469999999999999999999996   899999999999999999999


Q ss_pred             EEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHH
Q 047215          654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAM  732 (851)
Q Consensus       654 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~  732 (851)
                      ||+|||+++.....+.........||+.|||||++.+..++.++|||||||+||||+| |+.||......+   +...  
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~---~~~~--  272 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE---AIDC--  272 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH---HHHH--
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH---HHHH--
Confidence            9999999987544444444456779999999999999999999999999999999999 899987543221   1111  


Q ss_pred             HHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhh
Q 047215          733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH  792 (851)
Q Consensus       733 ~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  792 (851)
                       . ..+         .+...+..+++.+.+|+.+||+.||++|||++||+++|+.+.+..
T Consensus       273 -i-~~g---------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p  321 (329)
T 4aoj_A          273 -I-TQG---------RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP  321 (329)
T ss_dssp             -H-HHT---------CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred             -H-HcC---------CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence             1 111         112344567778999999999999999999999999999887654

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=4.1e-53  Score=457.06  Aligned_cols=260  Identities=28%  Similarity=0.429  Sum_probs=217.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      ++|...+.||+|+||+||+|++.      ++..||||++...+....++|.+|+++|++++|||||+++|+|.+++.++|
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            57888899999999999999864      467899999988887888899999999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCC-----------CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEE
Q 047215          587 VYEYMANGTLRSHLFGS-----------DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM  655 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl  655 (851)
                      |||||++|+|.++|+..           ....++|.++++|+.|+|+||+|||+   ++||||||||+||||++++.+||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEE
Confidence            99999999999999643           24579999999999999999999996   89999999999999999999999


Q ss_pred             eeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHH
Q 047215          656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKW  734 (851)
Q Consensus       656 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~  734 (851)
                      +|||+|+...............||+.|||||++.+..|+.++|||||||+||||+| |+.||......+   +..   ..
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~---~~~---~i  243 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VIE---CI  243 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HHH---HH
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHH---HH
Confidence            99999986443333333445679999999999999999999999999999999999 899987543221   111   11


Q ss_pred             hhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          735 QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       735 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                       ..+.         ....+..+++.+.+|+.+||+.||++|||++|+++.|+.+.+.
T Consensus       244 -~~~~---------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          244 -TQGR---------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             -HHTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -HcCC---------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence             1111         1234456777899999999999999999999999998877553

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.7e-52  Score=454.07  Aligned_cols=255  Identities=21%  Similarity=0.338  Sum_probs=211.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      .+++..++||+|+||+||+|++.      +++.||||++... .....++|.+|+.+|++++|||||+++|+|.+++.++
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  105 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS  105 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence            34566789999999999999873      4578999998765 3344678999999999999999999999999999999


Q ss_pred             EEEEecCCcchhhhccCCC--------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC
Q 047215          586 LVYEYMANGTLRSHLFGSD--------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF  651 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~  651 (851)
                      ||||||++|+|.++|+...              ...++|.++++|+.|||+||+|||+   ++||||||||+||||++++
T Consensus       106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~  182 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKL  182 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGG
T ss_pred             EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCC
Confidence            9999999999999996432              2468999999999999999999996   8999999999999999999


Q ss_pred             eEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHH
Q 047215          652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADW  730 (851)
Q Consensus       652 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~  730 (851)
                      .+||+|||+++.....+.........||+.|||||++.+..++.++|||||||+||||+| |+.||......   .+...
T Consensus       183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~---~~~~~  259 (308)
T 4gt4_A          183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ---DVVEM  259 (308)
T ss_dssp             CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH---HHHHH
T ss_pred             CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH---HHHHH
Confidence            999999999986543333334456679999999999999999999999999999999998 88888754322   11111


Q ss_pred             HHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          731 AMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       731 ~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                          ...+         .....+..++..+.+|+.+||+.||++||||+||+++|+
T Consensus       260 ----i~~~---------~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~  302 (308)
T 4gt4_A          260 ----IRNR---------QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR  302 (308)
T ss_dssp             ----HHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             ----HHcC---------CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence                1111         112345677788999999999999999999999999987

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.6e-51  Score=444.79  Aligned_cols=262  Identities=25%  Similarity=0.464  Sum_probs=208.6

Q ss_pred             HHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          510 VATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       510 ~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      ...+++...++||+|+||+||+|++++  .+|||+++..  +....+.|.+|+++|++++|||||+++|+|.+ +.++||
T Consensus        33 i~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iV  109 (307)
T 3omv_A           33 IEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIV  109 (307)
T ss_dssp             CCTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred             EcHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEE
Confidence            345678889999999999999999765  4788887643  45667889999999999999999999999975 568999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      ||||++|+|.++|+... .+++|.++++|+.|||+||+|||+   ++||||||||+||||++++.+||+|||+|+.....
T Consensus       110 mEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~  185 (307)
T 3omv_A          110 TQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW  185 (307)
T ss_dssp             EECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred             EEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence            99999999999997543 469999999999999999999996   89999999999999999999999999999875443


Q ss_pred             CccccccccccCCcccCcccccc---cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWR---QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~---~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      .........+||+.|||||++.+   ..|+.++|||||||+||||+||+.||........      .......+    ..
T Consensus       186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~------~~~~~~~~----~~  255 (307)
T 3omv_A          186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ------IIFMVGRG----YA  255 (307)
T ss_dssp             --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH------HHHHHHTT----CC
T ss_pred             CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH------HHHHHhcC----CC
Confidence            33344456789999999999964   3699999999999999999999999976443221      11111111    11


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                      .|.+ ...+..+++.+.+|+.+||+.||++||||.||+++|+.+.
T Consensus       256 ~p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~  299 (307)
T 3omv_A          256 SPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ  299 (307)
T ss_dssp             CCCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred             CCCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            2222 2344567788999999999999999999999999998653

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=7.4e-51  Score=448.98  Aligned_cols=270  Identities=23%  Similarity=0.380  Sum_probs=222.1

Q ss_pred             CHHHHHHHhcCCceeeeeeeecceEEEEEEEcC------cceeEEeecCCCC-hhhHHHHHHHHHHHHhcCC-cceeeEE
Q 047215          504 TLAEIRVATNNFDESLMIGVGGFGKVFKGEIED------CTLAAIKRANPQS-EQGLAEFETEIEMLSKLRH-RHLVSLI  575 (851)
Q Consensus       504 ~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~------~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H-pnIv~l~  575 (851)
                      ...+++...++|+..++||+|+||+||+|++.+      ++.||||++.... ....+.|.+|+++|++++| ||||+++
T Consensus        55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~  134 (353)
T 4ase_A           55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL  134 (353)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence            445667778899999999999999999998653      3578999987653 4456789999999999965 9999999


Q ss_pred             EEEcc-CCcEEEEEEecCCcchhhhccCCC--------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCC
Q 047215          576 GFCDE-QNEMILVYEYMANGTLRSHLFGSD--------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDV  640 (851)
Q Consensus       576 g~~~~-~~~~~lV~Ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDl  640 (851)
                      |+|.+ ++.++||||||++|+|.++|+...              ...++|.+++.++.|||+||+|||+   ++||||||
T Consensus       135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDL  211 (353)
T 4ase_A          135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDL  211 (353)
T ss_dssp             EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCC
T ss_pred             EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCcc
Confidence            99965 467899999999999999996432              3458999999999999999999996   89999999


Q ss_pred             CCCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCC
Q 047215          641 KTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPT  719 (851)
Q Consensus       641 k~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~  719 (851)
                      ||+||||++++.+||+|||+|+..............+||+.|||||++.+..|+.++|||||||+||||+| |+.||...
T Consensus       212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~  291 (353)
T 4ase_A          212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV  291 (353)
T ss_dssp             SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999999987544333334456789999999999999999999999999999999998 89998764


Q ss_pred             CCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          720 LPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       720 ~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      ...+.      .......+         .+...+..+++.+.+++.+||+.||++|||+.|+++||+.+++.
T Consensus       292 ~~~~~------~~~~i~~g---------~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~  348 (353)
T 4ase_A          292 KIDEE------FCRRLKEG---------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  348 (353)
T ss_dssp             CCSHH------HHHHHHHT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CHHHH------HHHHHHcC---------CCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence            33221      11111111         12234455677899999999999999999999999999988764

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=8.3e-51  Score=445.53  Aligned_cols=251  Identities=24%  Similarity=0.376  Sum_probs=206.9

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ++|+..+.||+|+||+||+|+. .+++.||||++...  .....+.|.+|+++|++|+|||||++++++.+++.+|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            6899999999999999999986 46789999998654  44556789999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      ||++|+|.++|.......+++.++..++.||+.||+|||+   ++||||||||+||||+.++.+||+|||+|+....  .
T Consensus       104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~--~  178 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS--T  178 (350)
T ss_dssp             CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCH--H
T ss_pred             CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecC--C
Confidence            9999999999976666678899999999999999999995   9999999999999999999999999999986432  1


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                      .......+||+.|||||++.+..|+.++|||||||+||||+||+.||......+      ....... +..     +   
T Consensus       179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~------~~~~i~~-~~~-----~---  243 (350)
T 4b9d_A          179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN------LVLKIIS-GSF-----P---  243 (350)
T ss_dssp             HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHH-TCC-----C---
T ss_pred             cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHc-CCC-----C---
Confidence            223355789999999999999999999999999999999999999997643221      1111111 110     1   


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       ..+..++..+.+|+.+||+.||++|||++|+++|
T Consensus       244 -~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          244 -PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             -CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             2234456679999999999999999999999999

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=2.9e-50  Score=440.57  Aligned_cols=256  Identities=21%  Similarity=0.351  Sum_probs=215.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      ..|+..++||+|+||+||+|+.. +++.||||++........+.+.+|+++|++++|||||++++++.+++.+|||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            56999999999999999999875 67899999987655555667899999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++|+|.+++..   ..+++.++..++.||+.||+|||+   ++||||||||+||||+.++.+||+|||+|+.....  ..
T Consensus       154 ~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~--~~  225 (346)
T 4fih_A          154 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VP  225 (346)
T ss_dssp             TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS--SC
T ss_pred             CCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCC--CC
Confidence            99999999864   358999999999999999999996   89999999999999999999999999999864332  22


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      .....+||+.|||||++.+..|+.++|||||||+||||++|+.||....+.+.   .   .... .     ...+.+  .
T Consensus       226 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~---~---~~i~-~-----~~~~~~--~  291 (346)
T 4fih_A          226 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA---M---KMIR-D-----NLPPRL--K  291 (346)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---H---HHHH-H-----SSCCCC--S
T ss_pred             cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH---H---HHHH-c-----CCCCCC--C
Confidence            34567899999999999999999999999999999999999999976432211   1   1111 1     111111  1


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      ....+++.+++|+.+||+.||++|||++|+++|         +|+...
T Consensus       292 ~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H---------p~~~~~  330 (346)
T 4fih_A          292 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH---------PFLAKA  330 (346)
T ss_dssp             CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC---------GGGGGC
T ss_pred             ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC---------HhhcCC
Confidence            234556779999999999999999999999999         998754

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=3.5e-50  Score=431.24  Aligned_cols=250  Identities=26%  Similarity=0.411  Sum_probs=201.6

Q ss_pred             ceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc----CCcEEEEE
Q 047215          516 DESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE----QNEMILVY  588 (851)
Q Consensus       516 ~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~----~~~~~lV~  588 (851)
                      +..++||+|+||+||+|+.. .+..||+|++...  .....+.|.+|+++|++|+|||||++++++..    ++.++|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            55678999999999999875 5678999987643  44556789999999999999999999999854    45689999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCC--eEEcCCCCCCeEEc-CCCeEEEeeccccccCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG--IIHRDVKTTNILLD-ENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~--iiHrDlk~~NILld-~~~~~kl~DFGla~~~~  665 (851)
                      |||++|+|.++|...  ..+++.++..++.||+.||+|||+   ++  ||||||||+||||+ .++.+||+|||+|+...
T Consensus       109 Ey~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~  183 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             eCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence            999999999999643  468999999999999999999995   55  99999999999997 57999999999998632


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      .    ......+||+.|||||++.+ .|+.++|||||||+||||+||+.||........     ..... ..+       
T Consensus       184 ~----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~-----~~~~i-~~~-------  245 (290)
T 3fpq_A          184 A----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-----IYRRV-TSG-------  245 (290)
T ss_dssp             T----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-----HHHHH-TTT-------
T ss_pred             C----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH-----HHHHH-HcC-------
Confidence            2    23446789999999999865 699999999999999999999999965432211     11111 111       


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                       .....++..+++.+.+|+.+||+.||++|||++|+++|         +|+++
T Consensus       246 -~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H---------p~~~~  288 (290)
T 3fpq_A          246 -VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH---------AFFQE  288 (290)
T ss_dssp             -CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS---------GGGC-
T ss_pred             -CCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC---------ccccC
Confidence             11111223344568999999999999999999999999         99864

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.1e-49  Score=434.58  Aligned_cols=263  Identities=20%  Similarity=0.212  Sum_probs=212.8

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      .+.|...++||+|+||.||+|+.. .++.||||++.....     ..+|+.+|++++|||||++++++.+++.+||||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            356888889999999999999974 578999999875422     24699999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC-eEEEeeccccccCCCCCc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~-~~kl~DFGla~~~~~~~~  669 (851)
                      |++|+|.++|...  ..+++.++..++.||+.||+|||+   ++||||||||+||||+.++ .+||+|||+|+.......
T Consensus       132 ~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~  206 (336)
T 4g3f_A          132 LEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL  206 (336)
T ss_dssp             CTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred             cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence            9999999999643  469999999999999999999995   8999999999999999887 699999999986543221


Q ss_pred             c---ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          670 T---HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       670 ~---~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      .   ......+||+.|||||++.+..|+.++|||||||+||||+||+.||......+..   ...   ...        +
T Consensus       207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~---~~i---~~~--------~  272 (336)
T 4g3f_A          207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC---LKI---ASE--------P  272 (336)
T ss_dssp             -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH---HHH---HHS--------C
T ss_pred             ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH---HHH---HcC--------C
Confidence            1   1223467999999999999999999999999999999999999999765443221   111   000        0


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh----hhhhccc
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL----HEAWMRT  798 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~----~~~w~~~  798 (851)
                      .....+++.+++.+.+++.+||+.||.+|||+.|++++|...++.    ..+|..+
T Consensus       273 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~  328 (336)
T 4g3f_A          273 PPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGE  328 (336)
T ss_dssp             CGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSS
T ss_pred             CCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCC
Confidence            001123456667799999999999999999999999999888763    3467653

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=6.1e-50  Score=431.60  Aligned_cols=263  Identities=21%  Similarity=0.289  Sum_probs=216.5

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|++.++||+|+||+||+|+. .+++.+|||++...   .....+.+.+|+++|++|+|||||++++++++++.+||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            5799999999999999999986 46789999998643   2334577999999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      |||++|+|.++|...  ..+++.++..++.||+.||+|||+   ++||||||||+||||+.++.+||+|||+|+......
T Consensus       112 Ey~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~  186 (311)
T 4aw0_A          112 SYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES  186 (311)
T ss_dssp             CCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred             ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence            999999999999643  468999999999999999999996   999999999999999999999999999998755434


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                      ........+||+.|||||++.+..|+.++||||+||+||||+||+.||......+   +.   .... ..        . 
T Consensus       187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~---~~---~~i~-~~--------~-  250 (311)
T 4aw0_A          187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL---IF---AKII-KL--------E-  250 (311)
T ss_dssp             TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH---HHHH-HT--------C-
T ss_pred             CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HH---HHHH-cC--------C-
Confidence            4444566789999999999999999999999999999999999999997543211   11   1111 11        1 


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCC
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDD  800 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~  800 (851)
                       ..++...++.+++|+.+||+.||++|||++|++.+-+ +  +..+|++.-+
T Consensus       251 -~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~-i--~~Hp~F~~id  298 (311)
T 4aw0_A          251 -YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP-L--KAHPFFESVT  298 (311)
T ss_dssp             -CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHH-H--HTSGGGTTCC
T ss_pred             -CCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHH-H--HCCCCcCCCC
Confidence             1233445567899999999999999999998765522 1  1238886543

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=4.2e-49  Score=441.75  Aligned_cols=257  Identities=21%  Similarity=0.357  Sum_probs=216.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      .+.|+..++||+|+||.||+|+.. .++.||||++........+.+.+|+.+|++++|||||++++++..++.+||||||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            356999999999999999999874 5789999998766666667789999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      |++|+|.+++...   .+++.++..++.||+.||+|||+   ++||||||||+||||+.++.+||+|||+|+.....  .
T Consensus       230 ~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~--~  301 (423)
T 4fie_A          230 LEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--V  301 (423)
T ss_dssp             CTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS--C
T ss_pred             CCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCC--C
Confidence            9999999998643   48999999999999999999996   89999999999999999999999999999864332  2


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      ......+||+.|||||++.+..|+.++|||||||+||||++|+.||....+.+.   .   ... ...     ..+.+  
T Consensus       302 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~---~---~~i-~~~-----~~~~~--  367 (423)
T 4fie_A          302 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA---M---KMI-RDN-----LPPRL--  367 (423)
T ss_dssp             CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---H---HHH-HHS-----CCCCC--
T ss_pred             ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH---H---HHH-HcC-----CCCCC--
Confidence            234567899999999999999999999999999999999999999975432211   1   111 111     11111  


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      .....+++.+++|+.+||+.||++|||++|+|+|         +|+...
T Consensus       368 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H---------p~~~~~  407 (423)
T 4fie_A          368 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH---------PFLAKA  407 (423)
T ss_dssp             SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC---------GGGGGC
T ss_pred             cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC---------HHhcCC
Confidence            1223455679999999999999999999999999         998754

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.8e-49  Score=430.75  Aligned_cols=268  Identities=24%  Similarity=0.332  Sum_probs=201.2

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC----cEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN----EMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~----~~~lV~  588 (851)
                      +++...++||+|+||+||+|++. ++.||||++...... ...+..|+..+.+++|||||+++|+|.+++    .++|||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~   80 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence            45677889999999999999974 678999998754322 223445666777899999999999997653    589999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcC-----CCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG-----AERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~-----~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      |||++|+|.++|+..   +++|.++++++.|+|+||+|||+.     .+++||||||||+||||+.++.+||+|||+++.
T Consensus        81 Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~  157 (303)
T 3hmm_A           81 DYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  157 (303)
T ss_dssp             ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             cCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence            999999999999654   589999999999999999999963     134899999999999999999999999999986


Q ss_pred             CCCCCcc--ccccccccCCcccCccccccc------CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcc----h-----hc
Q 047215          664 GPSMEHT--HVSTAVKGSFGYLDPEYFWRQ------QLTEKSDVYSFGVVLFEVVCARAVINPTLPKD----Q-----IN  726 (851)
Q Consensus       664 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~----~-----~~  726 (851)
                      .......  ......+||+.|||||++.+.      .++.++|||||||+||||+||+.|+.......    .     ..
T Consensus       158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~  237 (303)
T 3hmm_A          158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS  237 (303)
T ss_dssp             EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence            4332221  122346799999999999754      47889999999999999999988764322111    1     11


Q ss_pred             HHHHHHHHhhhcccccccCccCCCC-CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          727 LADWAMKWQKQRSLKSIIDPHLKGN-YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       727 l~~~~~~~~~~~~~~~i~d~~l~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ..+. ....    .....+|.+... .+.+++..+.+|+.+||+.||++||||.||+++|+.+.+
T Consensus       238 ~~~~-~~~~----~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~  297 (303)
T 3hmm_A          238 VEEM-RKVV----CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             HHHH-HHHH----TTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHH-HHHH----hcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence            1111 1111    111122222211 124567889999999999999999999999999987754

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=7.1e-49  Score=417.49  Aligned_cols=251  Identities=24%  Similarity=0.344  Sum_probs=196.4

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||+||+|+. .+++.+|||++...   .......+.+|+++|++++|||||++++++.+++.++|||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            5899999999999999999986 46789999988653   2334567999999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+ +|+|.+++...  .++++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+|+....  
T Consensus        93 Ey~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~--  164 (275)
T 3hyh_A           93 EYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--  164 (275)
T ss_dssp             ECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred             eCC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCC--
Confidence            999 68999998554  469999999999999999999996   8999999999999999999999999999986432  


Q ss_pred             ccccccccccCCcccCcccccccCC-CchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                       .......+||+.|||||++.+..+ +.++||||+||+||||+||+.||......      +...... .+.        
T Consensus       165 -~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~------~~~~~i~-~~~--------  228 (275)
T 3hyh_A          165 -GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP------VLFKNIS-NGV--------  228 (275)
T ss_dssp             -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHH-HTC--------
T ss_pred             -CCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHH-cCC--------
Confidence             223345789999999999998876 58999999999999999999999754221      1111111 110        


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                        ..++...++.+++|+.+||+.||++|||++|+++|         +|++.
T Consensus       229 --~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h---------pw~k~  268 (275)
T 3hyh_A          229 --YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD---------DWFKV  268 (275)
T ss_dssp             --CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC---------HHHHT
T ss_pred             --CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC---------ccccc
Confidence              12233455678999999999999999999999999         88764

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3.1e-49  Score=425.95  Aligned_cols=253  Identities=25%  Similarity=0.315  Sum_probs=204.2

Q ss_pred             cCCceeeeeeeecceEEEEEEEc----CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE----DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~----~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      ++|++.+.||+|+||+||+|+..    .++.+|||++...  .......+.+|+++|++++|||||++++++.+++.+||
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            57999999999999999999862    3578999988654  22234468899999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      |||||++|+|.++|...  ..+++.++..++.|++.||+|||+   ++||||||||+|||++.++.+||+|||+|+....
T Consensus       104 vmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  178 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID  178 (304)
T ss_dssp             EECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred             EEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence            99999999999999653  468999999999999999999996   8999999999999999999999999999986432


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      .  .......+||+.|||||++.+..|+.++|||||||+||||+||+.||......+   +   ..... ..        
T Consensus       179 ~--~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~---~---~~~i~-~~--------  241 (304)
T 3ubd_A          179 H--EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE---T---MTMIL-KA--------  241 (304)
T ss_dssp             ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---H---HHHHH-HC--------
T ss_pred             C--CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH---H---HHHHH-cC--------
Confidence            1  223345789999999999999999999999999999999999999997643221   1   11111 11        


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHHHHhhhhhccc
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPT-----MGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~L~~~~~~~~~w~~~  798 (851)
                      .  ..++..+++.+++|+.+||+.||++|||     ++|+++|         +|++.
T Consensus       242 ~--~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H---------p~f~~  287 (304)
T 3ubd_A          242 K--LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH---------SFFST  287 (304)
T ss_dssp             C--CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS---------GGGTT
T ss_pred             C--CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC---------ccccC
Confidence            1  1234455677999999999999999998     5899999         88865

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=3.1e-46  Score=409.12  Aligned_cols=292  Identities=60%  Similarity=1.061  Sum_probs=258.5

Q ss_pred             cccCHHHHHHHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc
Q 047215          501 KRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE  580 (851)
Q Consensus       501 ~~~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~  580 (851)
                      .++++.++...+++|+..+.||+|+||.||+|+..++..+|+|+.........+.+.+|+.++++++||||+++++++..
T Consensus        27 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  106 (321)
T 2qkw_B           27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE  106 (321)
T ss_dssp             ---CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred             eeecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence            45566677778899999999999999999999988889999999888777778889999999999999999999999999


Q ss_pred             CCcEEEEEEecCCcchhhhccCCCC--CCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeec
Q 047215          581 QNEMILVYEYMANGTLRSHLFGSDL--PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF  658 (851)
Q Consensus       581 ~~~~~lV~Ey~~~gsL~~~L~~~~~--~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DF  658 (851)
                      ++..++||||+++|+|.+++.....  ..+++.+++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+||
T Consensus       107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Df  183 (321)
T 2qkw_B          107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDF  183 (321)
T ss_dssp             TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCC
T ss_pred             CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeec
Confidence            9999999999999999999976542  358999999999999999999995   89999999999999999999999999


Q ss_pred             cccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhc
Q 047215          659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR  738 (851)
Q Consensus       659 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~  738 (851)
                      |+++...............||+.|+|||++.+..++.++||||||+++|||++|+.||....+.+......|.......+
T Consensus       184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~  263 (321)
T 2qkw_B          184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG  263 (321)
T ss_dssp             TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT
T ss_pred             ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc
Confidence            99986443333333445668999999999999999999999999999999999999998877777777888887777777


Q ss_pred             ccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhh
Q 047215          739 SLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAW  795 (851)
Q Consensus       739 ~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w  795 (851)
                      .+..++++.+....+++++..+.+++.+||+.||++|||+.|++++|+.+++.++.|
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~~~  320 (321)
T 2qkw_B          264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESV  320 (321)
T ss_dssp             CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSCCC
T ss_pred             cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcccCc
Confidence            778888888888888999999999999999999999999999999999998876654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1e-46  Score=407.47  Aligned_cols=257  Identities=23%  Similarity=0.333  Sum_probs=192.5

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC--------
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN--------  582 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~--------  582 (851)
                      ++|+..+.||+|+||+||+|+.. +++.+|||++... .....+.+.+|+++|++|+|||||++++++...+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            45899999999999999999864 6788999988654 3344567999999999999999999999986543        


Q ss_pred             ----cEEEEEEecCCcchhhhccCCCC-CCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEee
Q 047215          583 ----EMILVYEYMANGTLRSHLFGSDL-PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD  657 (851)
Q Consensus       583 ----~~~lV~Ey~~~gsL~~~L~~~~~-~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~D  657 (851)
                          .+|||||||++|+|.+++..... ....+..++.++.|++.||+|||+   ++||||||||+||||+.++.+||+|
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEcc
Confidence                37999999999999999976432 234556688999999999999996   8999999999999999999999999


Q ss_pred             ccccccCCCCCcc----------ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcH
Q 047215          658 FGLSKTGPSMEHT----------HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL  727 (851)
Q Consensus       658 FGla~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l  727 (851)
                      ||+|+........          ......+||+.|||||++.+..|+.++|||||||+||||++   ||...     ...
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~-----~~~  233 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ-----MER  233 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH-----HHH
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc-----cHH
Confidence            9999864332111          12234679999999999999999999999999999999996   55321     111


Q ss_pred             HHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          728 ADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       728 ~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      ......         +...... .......+.+.+|+.+||+.||.+|||+.|+++|         +|+++.
T Consensus       234 ~~~~~~---------~~~~~~p-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h---------~~~~~~  286 (299)
T 4g31_A          234 VRTLTD---------VRNLKFP-PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN---------AVFEDL  286 (299)
T ss_dssp             HHHHHH---------HHTTCCC-HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS---------GGGCCC
T ss_pred             HHHHHH---------HhcCCCC-CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC---------HhhCCC
Confidence            110111         0010110 0112334557889999999999999999999999         898754

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.4e-45  Score=410.64  Aligned_cols=271  Identities=21%  Similarity=0.309  Sum_probs=208.2

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc------CCc
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE------QNE  583 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~------~~~  583 (851)
                      ++|++.+.||+|+||+||+|+. ..++.||||++...  .....+.+.+|+++|++|+|||||++++++..      .+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            5799999999999999999986 46789999998754  33445678899999999999999999998753      467


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      +|||||||+ |+|.+++...  .++++.++..++.||+.||+|||+   ++||||||||+|||++.++.+||+|||+|+.
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~  207 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARG  207 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred             EEEEEeCCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeee
Confidence            899999996 6899998553  479999999999999999999996   9999999999999999999999999999986


Q ss_pred             CCCC--CccccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc
Q 047215          664 GPSM--EHTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL  740 (851)
Q Consensus       664 ~~~~--~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  740 (851)
                      ....  .........+||+.|||||++.+. .++.++||||+||++|||++|+.||.+....++................
T Consensus       208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~  287 (398)
T 4b99_A          208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI  287 (398)
T ss_dssp             C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGT
T ss_pred             cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHh
Confidence            4322  122234567899999999998875 5799999999999999999999999865443332211110000000000


Q ss_pred             cc-----------ccCccCCC---CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          741 KS-----------IIDPHLKG---NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       741 ~~-----------i~d~~l~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      ..           .+.+....   ...+..++.+.+|+.+||+.||.+|||++|+|+|         +|+..
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H---------p~f~~  350 (398)
T 4b99_A          288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH---------PFLAK  350 (398)
T ss_dssp             C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS---------GGGTT
T ss_pred             hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC---------HhhCc
Confidence            00           00000000   0012345678999999999999999999999999         88864

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2.1e-44  Score=399.82  Aligned_cols=270  Identities=20%  Similarity=0.285  Sum_probs=204.0

Q ss_pred             HHhcCCceeeeeeeecceEEEEEEEc----CcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcE
Q 047215          510 VATNNFDESLMIGVGGFGKVFKGEIE----DCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       510 ~~t~~f~~~~~LG~G~fG~Vykg~~~----~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~  584 (851)
                      ...++|++.++||+|+||+||+|+.+    .++.||+|++.....  ...+.+|+++|+++ +|||||++++++..++.+
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~   95 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV   95 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence            34678999999999999999999753    357899998865533  35678999999998 699999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCC-CeEEEeecccccc
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN-FVAKMSDFGLSKT  663 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~-~~~kl~DFGla~~  663 (851)
                      +||||||++|+|.+++.     .+++.++..++.|++.||+|||+   ++||||||||+|||++.+ +.+||+|||+|+.
T Consensus        96 ~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~  167 (361)
T 4f9c_A           96 VIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQG  167 (361)
T ss_dssp             EEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence            99999999999999983     48899999999999999999995   999999999999999876 8999999999975


Q ss_pred             CCCCCc--------------------------cccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCC
Q 047215          664 GPSMEH--------------------------THVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVI  716 (851)
Q Consensus       664 ~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~  716 (851)
                      ......                          .......+||+.|+|||++.+. .++.++||||+||++|||+||+.||
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf  247 (361)
T 4f9c_A          168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF  247 (361)
T ss_dssp             CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred             cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence            332111                          0112345799999999999775 5899999999999999999999999


Q ss_pred             CCCCCcc-hhcHHH----------HHHHHhhhc----------------cc--ccccCccC---------CCCCChhHHH
Q 047215          717 NPTLPKD-QINLAD----------WAMKWQKQR----------------SL--KSIIDPHL---------KGNYSPESLE  758 (851)
Q Consensus       717 ~~~~~~~-~~~l~~----------~~~~~~~~~----------------~~--~~i~d~~l---------~~~~~~~~~~  758 (851)
                      ....... +.....          +........                ..  .....|.+         ........++
T Consensus       248 ~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~  327 (361)
T 4f9c_A          248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPD  327 (361)
T ss_dssp             SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCH
T ss_pred             CCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCH
Confidence            6543321 111100          000000000                00  00000000         0011123456


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          759 KFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       759 ~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      .+++|+.+||+.||++|||++|+|+|         +|+++
T Consensus       328 ~a~DLl~~lL~~dP~~R~ta~eaL~H---------p~f~~  358 (361)
T 4f9c_A          328 EAYDLLDKLLDLNPASRITAEEALLH---------PFFKD  358 (361)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHHTS---------GGGTT
T ss_pred             HHHHHHHHHCcCChhHCcCHHHHhcC---------cccCC
Confidence            78999999999999999999999999         99864

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=9.5e-44  Score=417.89  Aligned_cols=258  Identities=21%  Similarity=0.314  Sum_probs=215.2

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      ++|++.+.||+|+||.||+|+.. .++.+|+|++........+.+.+|+++|++|+|||||++++++..++.++||||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            68999999999999999999874 67899999988777777788999999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC--CCeEEEeeccccccCCCCCc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE--NFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~--~~~~kl~DFGla~~~~~~~~  669 (851)
                      ++|+|.++|.... ..+++.++..++.||+.||+|||+   ++|+||||||+|||++.  .+.+||+|||+++.....  
T Consensus       237 ~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~--  310 (573)
T 3uto_A          237 SGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK--  310 (573)
T ss_dssp             CCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--
T ss_pred             CCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCC--
Confidence            9999999985432 469999999999999999999995   99999999999999975  489999999999875432  


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                       ......+||+.|||||++.+..|+.++||||+||+||||++|+.||......+.      ...... .      +..+.
T Consensus       311 -~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~------~~~i~~-~------~~~~~  376 (573)
T 3uto_A          311 -QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET------LRNVKS-C------DWNMD  376 (573)
T ss_dssp             -SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH------HHHHHT-T------CCCCC
T ss_pred             -CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH------HHHHHh-C------CCCCC
Confidence             223456899999999999999999999999999999999999999976533221      111110 0      00111


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      .......++.+++|+.+||+.||.+|||+.|+|+|         +|++..
T Consensus       377 ~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H---------pw~~~~  417 (573)
T 3uto_A          377 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH---------PWLTPG  417 (573)
T ss_dssp             SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS---------TTTSCC
T ss_pred             cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC---------cCcCCC
Confidence            11123345678999999999999999999999999         888754

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=8.7e-44  Score=390.32  Aligned_cols=287  Identities=43%  Similarity=0.738  Sum_probs=245.1

Q ss_pred             CcccCHHHHHHHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCCh-hhHHHHHHHHHHHHhcCCcceeeEEEEE
Q 047215          500 GKRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSE-QGLAEFETEIEMLSKLRHRHLVSLIGFC  578 (851)
Q Consensus       500 ~~~~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~l~g~~  578 (851)
                      .+.+++.++....++|...+.||+|+||.||+|+..+++.+|||++..... .....+.+|++++++++||||++++++|
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   96 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC   96 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence            367899999999999999999999999999999988899999999876532 2234689999999999999999999999


Q ss_pred             ccCCcEEEEEEecCCcchhhhccCCC--CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEe
Q 047215          579 DEQNEMILVYEYMANGTLRSHLFGSD--LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMS  656 (851)
Q Consensus       579 ~~~~~~~lV~Ey~~~gsL~~~L~~~~--~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~  656 (851)
                      ..++..++||||+++|+|.+++....  ..++++..+..++.|++.||.|||+.+..+|+||||||+|||++.++.+||+
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~  176 (326)
T 3uim_A           97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG  176 (326)
T ss_dssp             CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred             ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence            99999999999999999999997643  3459999999999999999999997323399999999999999999999999


Q ss_pred             eccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCC--CCcchhcHHHHHHHH
Q 047215          657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPT--LPKDQINLADWAMKW  734 (851)
Q Consensus       657 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~--~~~~~~~l~~~~~~~  734 (851)
                      |||+++..... .........||+.|+|||++.+..++.++|||||||++|||++|+.||...  .........+|....
T Consensus       177 Dfg~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  255 (326)
T 3uim_A          177 DFGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL  255 (326)
T ss_dssp             CCSSCEECCSS-SSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred             cCccccccCcc-cccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence            99999864332 222334556999999999999999999999999999999999999998631  122334566777666


Q ss_pred             hhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          735 QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       735 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      ........+.+..+...++.+.+..+.+++.+||+.||.+|||++|++++|+.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             TSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             hhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence            66667777788888888889999999999999999999999999999999874

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.7e-43  Score=411.79  Aligned_cols=255  Identities=22%  Similarity=0.289  Sum_probs=205.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC------ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ------SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~------~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      ++|++.++||+|+||.||+|+.. .++.+|||++...      ..........++.+++.++|||||++++++.+++.+|
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            67999999999999999999875 5789999987542      1111222334566777889999999999999999999


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      ||||||++|+|.++|...  ..+++.++..++.||+.||+|||+   ++||||||||+||||+.+|.+||+|||+|+...
T Consensus       269 lVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~  343 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFS  343 (689)
T ss_dssp             EEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             EEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence            999999999999999653  468999999999999999999994   999999999999999999999999999998643


Q ss_pred             CCCccccccccccCCcccCccccc-ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      ..    .....+||+.|||||++. +..|+.++|||||||+||||++|+.||......+...+..   .         +.
T Consensus       344 ~~----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~---~---------i~  407 (689)
T 3v5w_A          344 KK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR---M---------TL  407 (689)
T ss_dssp             SC----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHH---H---------HH
T ss_pred             CC----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH---h---------hc
Confidence            22    234568999999999996 4689999999999999999999999997543332211111   1         01


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHHHHhhhhhcccC
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT-----MGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      ..  ...++...++.+++|+.+||+.||.+|++     ++|+++|         +|++.-
T Consensus       408 ~~--~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H---------pfF~~i  456 (689)
T 3v5w_A          408 TM--AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES---------PFFRSL  456 (689)
T ss_dssp             HC--CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS---------GGGTTC
T ss_pred             CC--CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC---------ccccCC
Confidence            00  11233445567899999999999999998     7999999         776643

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=1e-41  Score=381.16  Aligned_cols=262  Identities=25%  Similarity=0.464  Sum_probs=216.4

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc--------CcceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccC
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE--------DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQ  581 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~--------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~  581 (851)
                      .++|...+.||+|+||.||+|+..        ++..+|||++... .....+.+.+|+++++++ +||||++++++|..+
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            467889999999999999999863        3457899998765 445567899999999999 899999999999999


Q ss_pred             CcEEEEEEecCCcchhhhccCCC--------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE
Q 047215          582 NEMILVYEYMANGTLRSHLFGSD--------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL  647 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl  647 (851)
                      +..++||||+++|+|.+++....              ...+++.+++.++.|++.||.|||+   ++|+||||||+|||+
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEE
Confidence            99999999999999999986543              2358899999999999999999995   899999999999999


Q ss_pred             cCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhc
Q 047215          648 DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQIN  726 (851)
Q Consensus       648 d~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~  726 (851)
                      +.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+   
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~---  313 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---  313 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---
T ss_pred             CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---
Confidence            9999999999999986544333233344567889999999999999999999999999999999 888886543222   


Q ss_pred             HHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhh
Q 047215          727 LADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH  792 (851)
Q Consensus       727 l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  792 (851)
                      +...   . ..         ......+..++..+.+++.+||+.||.+|||+.|++++|+.++.+.
T Consensus       314 ~~~~---~-~~---------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~  366 (370)
T 2psq_A          314 LFKL---L-KE---------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT  366 (370)
T ss_dssp             HHHH---H-HT---------TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHH---H-hc---------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence            1111   1 11         1112234556678999999999999999999999999999988654

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1.8e-40  Score=360.67  Aligned_cols=281  Identities=35%  Similarity=0.650  Sum_probs=230.0

Q ss_pred             cccCHHHHHHHhcCCcee------eeeeeecceEEEEEEEcCcceeEEeecCCC----ChhhHHHHHHHHHHHHhcCCcc
Q 047215          501 KRFTLAEIRVATNNFDES------LMIGVGGFGKVFKGEIEDCTLAAIKRANPQ----SEQGLAEFETEIEMLSKLRHRH  570 (851)
Q Consensus       501 ~~~~~~~l~~~t~~f~~~------~~LG~G~fG~Vykg~~~~~~~vavK~~~~~----~~~~~~~~~~Ei~~l~~l~Hpn  570 (851)
                      ..|++.++..++++|...      +.||+|+||.||+|.. ++..+|+|++...    .....+.+.+|+.++++++|||
T Consensus        13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   91 (307)
T 2nru_A           13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN   91 (307)
T ss_dssp             EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred             CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence            578999999999999988      8999999999999986 5678899987643    2344678999999999999999


Q ss_pred             eeeEEEEEccCCcEEEEEEecCCcchhhhccCC-CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC
Q 047215          571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGS-DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE  649 (851)
Q Consensus       571 Iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~-~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~  649 (851)
                      |+++++++..++..++||||+++|+|.+++... ...++++..+..++.|++.||.|||+   .+++||||||+|||++.
T Consensus        92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~  168 (307)
T 2nru_A           92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDE  168 (307)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECT
T ss_pred             eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEcC
Confidence            999999999999999999999999999998643 23568999999999999999999995   89999999999999999


Q ss_pred             CCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHH
Q 047215          650 NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD  729 (851)
Q Consensus       650 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~  729 (851)
                      ++.+||+|||+++...............||+.|+|||.+.+ .++.++||||||+++|||++|+.||........  +..
T Consensus       169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~  245 (307)
T 2nru_A          169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--LLD  245 (307)
T ss_dssp             TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB--TTH
T ss_pred             CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH--HHH
Confidence            99999999999986544333333345679999999998865 489999999999999999999999976543322  122


Q ss_pred             HHHHHhh-hcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          730 WAMKWQK-QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       730 ~~~~~~~-~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                      +...... ...+...+++.+ ...+...+..+.+++.+||+.||.+|||+++++++|+.+.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          246 IKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             HHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            2222221 122233444443 3456778889999999999999999999999999998763

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=3.3e-41  Score=367.22  Aligned_cols=265  Identities=25%  Similarity=0.398  Sum_probs=216.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      .++|...++||+|+||.||+|+.. ++..+|+|++........+.|.+|++++++++||||+++++++..++..++||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            367888999999999999999875 5788999998877777888999999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++|+|.+++.... ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++........
T Consensus        89 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  164 (310)
T 3s95_A           89 IKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ  164 (310)
T ss_dssp             CTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred             cCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence            99999999996543 468999999999999999999995   89999999999999999999999999999764322111


Q ss_pred             c------------cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhc
Q 047215          671 H------------VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR  738 (851)
Q Consensus       671 ~------------~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~  738 (851)
                      .            ......||+.|+|||++.+..++.++||||||+++|||++|..|+....+........         
T Consensus       165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~---------  235 (310)
T 3s95_A          165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN---------  235 (310)
T ss_dssp             ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC---------
T ss_pred             ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh---------
Confidence            0            1124579999999999999999999999999999999999999887644432210000         


Q ss_pred             ccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhh
Q 047215          739 SLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEA  794 (851)
Q Consensus       739 ~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~  794 (851)
                       .....+..    .+..++..+.+++.+||+.||.+|||++++++.|+.+......
T Consensus       236 -~~~~~~~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~  286 (310)
T 3s95_A          236 -VRGFLDRY----CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG  286 (310)
T ss_dssp             -HHHHHHHT----CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             -hhcccccc----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence             00011111    1234445689999999999999999999999999988765443

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=2.4e-41  Score=366.37  Aligned_cols=256  Identities=21%  Similarity=0.344  Sum_probs=213.9

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      .++|+..+.||+|+||.||+|.. .+++.+|+|++........+.+.+|+.++++++||||+++++++..++..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            36799999999999999999985 56788999998766555567889999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++|+|.+++...   .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++......  
T Consensus        99 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--  170 (297)
T 3fxz_A           99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--  170 (297)
T ss_dssp             CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT--
T ss_pred             CCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc--
Confidence            9999999998654   48899999999999999999996   899999999999999999999999999987643322  


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      .......||+.|+|||++.+..++.++|||||||++|||++|+.||....+....      .......      .+  ..
T Consensus       171 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~------~~~~~~~------~~--~~  236 (297)
T 3fxz_A          171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL------YLIATNG------TP--EL  236 (297)
T ss_dssp             CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH------HHHHHHC------SC--CC
T ss_pred             cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH------HHHHhCC------CC--CC
Confidence            1234567999999999999999999999999999999999999999754332111      1111111      01  11


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      ..+...+..+.+++.+||+.||.+|||++|+++|         +|++.
T Consensus       237 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h---------~~~~~  275 (297)
T 3fxz_A          237 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH---------QFLKI  275 (297)
T ss_dssp             SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC---------GGGGG
T ss_pred             CCccccCHHHHHHHHHHccCChhHCcCHHHHhhC---------hhhcc
Confidence            2234566779999999999999999999999999         88864

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.7e-41  Score=377.09  Aligned_cols=272  Identities=23%  Similarity=0.384  Sum_probs=219.6

Q ss_pred             ccCHHHHHHHhcCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceee
Q 047215          502 RFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVS  573 (851)
Q Consensus       502 ~~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~  573 (851)
                      .+...+++...++|...+.||+|+||.||+|++.      +++.+|||++... .....+.+.+|+++++++ +||||++
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            3455667778899999999999999999999742      3478999998764 344557799999999999 7999999


Q ss_pred             EEEEEccCC-cEEEEEEecCCcchhhhccCCCC-----------------------------------------------
Q 047215          574 LIGFCDEQN-EMILVYEYMANGTLRSHLFGSDL-----------------------------------------------  605 (851)
Q Consensus       574 l~g~~~~~~-~~~lV~Ey~~~gsL~~~L~~~~~-----------------------------------------------  605 (851)
                      ++++|...+ ..++||||+++|+|.+++.....                                               
T Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (359)
T 3vhe_A           91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE  170 (359)
T ss_dssp             EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred             eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence            999997754 48999999999999999965432                                               


Q ss_pred             -----------------CCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          606 -----------------PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       606 -----------------~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                                       ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  247 (359)
T 3vhe_A          171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP  247 (359)
T ss_dssp             -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred             cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence                             128899999999999999999996   899999999999999999999999999998654333


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                      .........||+.|+|||++.+..++.++|||||||++|||++ |+.||........      .......+         
T Consensus       248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~------~~~~~~~~---------  312 (359)
T 3vhe_A          248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRRLKEG---------  312 (359)
T ss_dssp             TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH------HHHHHHHT---------
T ss_pred             cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH------HHHHHHcC---------
Confidence            3333455678999999999999999999999999999999998 9999876543221      11111111         


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      .....+..+++.+.+++.+||+.||.+|||++|+++||+.+++.
T Consensus       313 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  356 (359)
T 3vhe_A          313 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  356 (359)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence            11122344556799999999999999999999999999988754

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=3.5e-41  Score=370.38  Aligned_cols=253  Identities=22%  Similarity=0.326  Sum_probs=211.4

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      .++|...+.||+|+||.||+|+. ..++.||||++...  .....+.+.+|+++|++++||||+++++++...+..++||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            36799999999999999999987 57789999987653  4455677899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++..... 
T Consensus        94 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-  167 (328)
T 3fe3_A           94 EYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-  167 (328)
T ss_dssp             CCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-
T ss_pred             ECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC-
Confidence            999999999998554  358899999999999999999995   89999999999999999999999999999753322 


Q ss_pred             ccccccccccCCcccCcccccccCCC-chHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t-~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                        ......+||+.|+|||++.+..++ .++|||||||++|||++|+.||......+      ...... .+        .
T Consensus       168 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~i~-~~--------~  230 (328)
T 3fe3_A          168 --GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE------LRERVL-RG--------K  230 (328)
T ss_dssp             --CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHH-HC--------C
T ss_pred             --CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH------HHHHHH-hC--------C
Confidence              223556799999999999988775 89999999999999999999997643211      111111 11        1


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                        ...+...+..+.+++.+||+.||.+|||++|+++|         +|+..
T Consensus       231 --~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h---------~~~~~  270 (328)
T 3fe3_A          231 --YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD---------RWINA  270 (328)
T ss_dssp             --CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC---------TTTTT
T ss_pred             --CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC---------HhhcC
Confidence              12233455678999999999999999999999999         88764

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=3.3e-41  Score=370.48  Aligned_cols=264  Identities=22%  Similarity=0.357  Sum_probs=207.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-Ccc----eeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCT----LAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~----~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      ++|+..++||+|+||.||+|+.. ++.    .+++|.+... .....+.|.+|+.++++++||||++++++|..+ ..++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEE
Confidence            67888999999999999999864 333    3578877543 345567899999999999999999999999875 4789


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      |+||+++|+|.+++.... ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus        94 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~  169 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  169 (327)
T ss_dssp             EEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred             EEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence            999999999999986543 468999999999999999999996   8999999999999999999999999999986443


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ...........+|+.|+|||++.+..++.++|||||||++|||++ |+.||........   ...             +.
T Consensus       170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~~~-------------~~  233 (327)
T 3poz_A          170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---SSI-------------LE  233 (327)
T ss_dssp             TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---HHH-------------HH
T ss_pred             CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH---HHH-------------HH
Confidence            333333344567889999999999999999999999999999999 9998876433221   111             11


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcc
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMR  797 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~  797 (851)
                      .......+..++..+.+++.+||+.||.+|||+.|++++|+.+.+....+..
T Consensus       234 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~~~~~~  285 (327)
T 3poz_A          234 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV  285 (327)
T ss_dssp             TTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSHHHHBC
T ss_pred             cCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhhhhhhh
Confidence            1111223455667799999999999999999999999999988766555543

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1e-40  Score=365.60  Aligned_cols=267  Identities=22%  Similarity=0.315  Sum_probs=220.9

Q ss_pred             cccCHHHHHHHhcC----------CceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCc
Q 047215          501 KRFTLAEIRVATNN----------FDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHR  569 (851)
Q Consensus       501 ~~~~~~~l~~~t~~----------f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~Hp  569 (851)
                      ..++.++++.+++.          |+..+.||+|+||.||+|+.. +++.||||++........+.+.+|+.++++++||
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            56788888887764          777789999999999999976 6889999998877666678899999999999999


Q ss_pred             ceeeEEEEEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC
Q 047215          570 HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE  649 (851)
Q Consensus       570 nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~  649 (851)
                      ||+++++++...+..++||||+++|+|.+++..   ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~  176 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTL  176 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECT
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECC
Confidence            999999999999999999999999999999854   358999999999999999999995   89999999999999999


Q ss_pred             CCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHH
Q 047215          650 NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD  729 (851)
Q Consensus       650 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~  729 (851)
                      ++.+||+|||+++......  .......||+.|+|||++.+..++.++||||||+++|||++|+.||.......   .  
T Consensus       177 ~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~---~--  249 (321)
T 2c30_A          177 DGRVKLSDFGFCAQISKDV--PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ---A--  249 (321)
T ss_dssp             TCCEEECCCTTCEECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---H--
T ss_pred             CCcEEEeeeeeeeecccCc--cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---H--
Confidence            9999999999987643321  12345679999999999999999999999999999999999999987543211   1  


Q ss_pred             HHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          730 WAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       730 ~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                       ......      ...+.+  ......+..+.+++.+||+.||.+|||++|+++|         +|+..
T Consensus       250 -~~~~~~------~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h---------p~~~~  300 (321)
T 2c30_A          250 -MKRLRD------SPPPKL--KNSHKVSPVLRDFLERMLVRDPQERATAQELLDH---------PFLLQ  300 (321)
T ss_dssp             -HHHHHH------SSCCCC--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS---------GGGGG
T ss_pred             -HHHHhc------CCCCCc--CccccCCHHHHHHHHHHccCChhhCcCHHHHhcC---------hhhcc
Confidence             111111      111111  1123455678999999999999999999999999         88764

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.5e-41  Score=372.34  Aligned_cols=273  Identities=22%  Similarity=0.337  Sum_probs=210.6

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC----cEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN----EMIL  586 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~----~~~l  586 (851)
                      ..++|+..++||+|+||.||+|+.. ++.||||++..... ....+..|+.++++++||||+++++++....    .+++
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l   99 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL   99 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence            3478999999999999999999876 67899999865433 3445677999999999999999999997643    4799


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCC----------CeEEcCCCCCCeEEcCCCeEEEe
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER----------GIIHRDVKTTNILLDENFVAKMS  656 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~----------~iiHrDlk~~NILld~~~~~kl~  656 (851)
                      ||||+++|+|.+++...   .+++.++..++.|++.||.|||+   .          +|+||||||+|||++.++.+||+
T Consensus       100 v~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~  173 (322)
T 3soc_A          100 ITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA  173 (322)
T ss_dssp             EEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred             EEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence            99999999999999653   48999999999999999999995   6          99999999999999999999999


Q ss_pred             eccccccCCCCCccccccccccCCcccCcccccc-----cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHH
Q 047215          657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR-----QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA  731 (851)
Q Consensus       657 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~  731 (851)
                      |||+++...............||+.|+|||++.+     ..++.++|||||||++|||++|+.||...............
T Consensus       174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~  253 (322)
T 3soc_A          174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI  253 (322)
T ss_dssp             CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred             cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence            9999976443333223344679999999999986     45677899999999999999999999765443222211110


Q ss_pred             HHHhhh-----cccccccCccCCCC-CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          732 MKWQKQ-----RSLKSIIDPHLKGN-YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       732 ~~~~~~-----~~~~~i~d~~l~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      ......     ........+.+... ....++..+.+|+.+||+.||.+|||++|+++.|+.+.+.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          254 GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            000000     00001111111111 1234667799999999999999999999999999988764

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=6.3e-41  Score=367.63  Aligned_cols=259  Identities=24%  Similarity=0.319  Sum_probs=209.3

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++|+..+.||+|+||.||+|+.. +++.+|+|++.... ....+.+.+|+.++++++||||+++++++..++..++||||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            68999999999999999999875 67889999876543 23346688999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++........
T Consensus        87 ~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  161 (323)
T 3tki_A           87 CSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  161 (323)
T ss_dssp             CTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             CCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence            9999999999544  458999999999999999999995   89999999999999999999999999999764332333


Q ss_pred             ccccccccCCcccCcccccccCC-CchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~-t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                      .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||........ ....|    ...         ...
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~----~~~---------~~~  227 (323)
T 3tki_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDW----KEK---------KTY  227 (323)
T ss_dssp             CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-HHHHH----HTT---------CTT
T ss_pred             cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHH----hcc---------ccc
Confidence            33445679999999999987765 7899999999999999999999976443221 11111    111         000


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      .......+..+.+|+.+||+.||.+|||++|+++|         +|+...
T Consensus       228 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h---------~~~~~~  268 (323)
T 3tki_A          228 LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD---------RWYNKP  268 (323)
T ss_dssp             STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC---------TTTTCC
T ss_pred             CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC---------hhhccc
Confidence            11123455678899999999999999999999999         888653

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=3.5e-41  Score=367.28  Aligned_cols=263  Identities=27%  Similarity=0.463  Sum_probs=206.3

Q ss_pred             HHHHHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcE
Q 047215          507 EIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       507 ~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~  584 (851)
                      ++....++|++.+.||+|+||.||+|+. .++.+|||++...  .....+.+.+|++++++++||||+++++++...+..
T Consensus        31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  109 (309)
T 3p86_A           31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL  109 (309)
T ss_dssp             -CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred             cccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence            3344557899999999999999999986 4677899987654  345567899999999999999999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCC-CCCCchhhhHHHHHHHHHHHHHhhcCCCCC--eEEcCCCCCCeEEcCCCeEEEeecccc
Q 047215          585 ILVYEYMANGTLRSHLFGSD-LPPLTWKQRLDACIGAARGLHYLHTGAERG--IIHRDVKTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~-~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~--iiHrDlk~~NILld~~~~~kl~DFGla  661 (851)
                      ++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+   .+  |+||||||+|||++.++.+||+|||++
T Consensus       110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a  186 (309)
T 3p86_A          110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS  186 (309)
T ss_dssp             EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC--
T ss_pred             EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCC
Confidence            99999999999999996543 2248899999999999999999995   77  999999999999999999999999999


Q ss_pred             ccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK  741 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  741 (851)
                      +.....  ........||+.|+|||++.+..++.++|||||||++|||++|+.||....+.+.      .......    
T Consensus       187 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~------~~~~~~~----  254 (309)
T 3p86_A          187 RLKAST--FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV------VAAVGFK----  254 (309)
T ss_dssp             -----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH------HHHHHHS----
T ss_pred             cccccc--ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhc----
Confidence            753321  1123446799999999999999999999999999999999999999875432211      1111000    


Q ss_pred             cccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          742 SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       742 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                           ......+..++..+.+++.+||+.||.+|||++++++.|+.+++
T Consensus       255 -----~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          255 -----CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             -----CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             -----CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                 11122344556679999999999999999999999999886653

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=1.6e-41  Score=380.53  Aligned_cols=261  Identities=25%  Similarity=0.383  Sum_probs=212.5

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ..++|...+.||+|+||.||+|+.. +++.||||.+... .......|.+|+++|++++||||++++++|..++..++||
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  191 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM  191 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence            4467888999999999999999986 6788999998755 3344567899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++.... ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus       192 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~  267 (377)
T 3cbl_A          192 ELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV  267 (377)
T ss_dssp             ECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred             EcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence            9999999999986432 358899999999999999999996   899999999999999999999999999998633221


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                      .........++..|+|||.+....++.++|||||||++|||++ |+.|+......+   ..    .....         .
T Consensus       268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~---~~----~~~~~---------~  331 (377)
T 3cbl_A          268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ---TR----EFVEK---------G  331 (377)
T ss_dssp             EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH---HH----HHHHT---------T
T ss_pred             eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HH----HHHHc---------C
Confidence            1111122335778999999998999999999999999999998 888886543211   11    11111         1


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      .....+..++..+.+++.+||+.||.+|||++++++.|+.+.+.
T Consensus       332 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence            11223445667899999999999999999999999999987653

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=7.5e-41  Score=367.34  Aligned_cols=260  Identities=25%  Similarity=0.397  Sum_probs=211.8

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc----CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE----DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~----~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .++|.+.++||+|+||.||+|+..    .+..+|||++... .....+.|.+|+.++++++||||+++++++..++..++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            467889999999999999999974    3456999998765 45556789999999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+++|+|.+++.... ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       128 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  203 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED  203 (325)
T ss_dssp             EEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred             EeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence            999999999999996543 468999999999999999999995   8999999999999999999999999999986443


Q ss_pred             CCc-cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          667 MEH-THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       667 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      ... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+   +   .....         
T Consensus       204 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~---~~~~~---------  268 (325)
T 3kul_A          204 DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD---V---ISSVE---------  268 (325)
T ss_dssp             ---CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH---H---HHHHH---------
T ss_pred             CccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH---H---HHHHH---------
Confidence            221 112233456788999999999999999999999999999999 998886543221   1   11111         


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                       .......+..++..+.+++.+||+.||.+|||+.|+++.|+.+++.
T Consensus       269 -~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          269 -EGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             -TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             -cCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence             1111223445667899999999999999999999999999987654

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-40  Score=374.17  Aligned_cols=264  Identities=24%  Similarity=0.436  Sum_probs=216.9

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc--------CcceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEcc
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE--------DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDE  580 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~--------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~  580 (851)
                      ..++|...++||+|+||.||+|+..        .+..+|||++... .......+.+|+++++++ +||||++++++|..
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  146 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ  146 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence            4578899999999999999999863        2357899998765 445567899999999999 99999999999999


Q ss_pred             CCcEEEEEEecCCcchhhhccCCC--------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeE
Q 047215          581 QNEMILVYEYMANGTLRSHLFGSD--------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL  646 (851)
Q Consensus       581 ~~~~~lV~Ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NIL  646 (851)
                      ++..++||||+++|+|.+++....              ...+++.+++.++.|++.||.|||+   .+|+||||||+|||
T Consensus       147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl  223 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVL  223 (382)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEE
T ss_pred             CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEE
Confidence            999999999999999999996543              2458999999999999999999995   89999999999999


Q ss_pred             EcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchh
Q 047215          647 LDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQI  725 (851)
Q Consensus       647 ld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~  725 (851)
                      ++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.|+......   
T Consensus       224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~---  300 (382)
T 3tt0_A          224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---  300 (382)
T ss_dssp             ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---
T ss_pred             EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---
Confidence            99999999999999986544333333445567899999999999999999999999999999999 88888654321   


Q ss_pred             cHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhh
Q 047215          726 NLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE  793 (851)
Q Consensus       726 ~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~  793 (851)
                         +...... .         ......+..++..+.+++.+||+.||.+|||++|++++|+.+.....
T Consensus       301 ---~~~~~~~-~---------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  355 (382)
T 3tt0_A          301 ---ELFKLLK-E---------GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS  355 (382)
T ss_dssp             ---HHHHHHH-T---------TCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred             ---HHHHHHH-c---------CCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence               1111111 1         11122334556779999999999999999999999999998876543

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=2.3e-41  Score=365.57  Aligned_cols=271  Identities=24%  Similarity=0.383  Sum_probs=210.0

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-----cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc--CCcE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-----EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEM  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-----~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~--~~~~  584 (851)
                      .++|+..+.||+|+||.||+|++     .+++.+|||++........+.+.+|++++++++||||++++++|..  ....
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            36788899999999999999985     3568899999988777778899999999999999999999999854  4568


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ++||||+++|+|.+++.... ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~  164 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVL  164 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred             EEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence            99999999999999996543 358899999999999999999995   89999999999999999999999999999864


Q ss_pred             CCCCc-cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHH----hhhcc
Q 047215          665 PSMEH-THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW----QKQRS  739 (851)
Q Consensus       665 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~----~~~~~  739 (851)
                      ..... ........++..|+|||.+.+..++.++||||||+++|||++|..|+......    ........    .....
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~  240 (295)
T 3ugc_A          165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE----FMRMIGNDKQGQMIVFH  240 (295)
T ss_dssp             -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH----HHHHHCTTCCTHHHHHH
T ss_pred             cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH----HHhhhcCccccchhHHH
Confidence            33221 12223445778899999999999999999999999999999999887532110    00000000    00000


Q ss_pred             cccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          740 LKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       740 ~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ..+.+........+..++..+.+++.+||+.||.+|||++|+++.|+.+.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~  291 (295)
T 3ugc_A          241 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  291 (295)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence            001111112223455667789999999999999999999999999998764

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.5e-40  Score=362.56  Aligned_cols=270  Identities=20%  Similarity=0.299  Sum_probs=209.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .++|+..++||+|+||.||+|+..+++.+|+|++....  ......+.+|++++++++||||+++++++..++..++|||
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            36799999999999999999999889999999986542  2335678899999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++ +|.+.+.... ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....  
T Consensus       100 ~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~--  172 (311)
T 3niz_A          100 FMEK-DLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIP--  172 (311)
T ss_dssp             CCSE-EHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC--
T ss_pred             CCCC-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCC--
Confidence            9985 7877775543 458999999999999999999995   89999999999999999999999999999864321  


Q ss_pred             cccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcc---cc----
Q 047215          670 THVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS---LK----  741 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~----  741 (851)
                      ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....   .........   ..    
T Consensus       173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~---i~~~~~~~~~~~~~~~~~  249 (311)
T 3niz_A          173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPK---IFSILGTPNPREWPQVQE  249 (311)
T ss_dssp             CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHH---HHHHHCCCCTTTSGGGTT
T ss_pred             cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHH---HHHHHCCCChHHhhhhhc
Confidence            122334568999999999876 5689999999999999999999999976554432211   111110000   00    


Q ss_pred             ---------cccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCC
Q 047215          742 ---------SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDD  800 (851)
Q Consensus       742 ---------~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~  800 (851)
                               ...+........+..++.+.+|+.+||+.||.+|||++|+++|         +|++..+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h---------p~f~~~~  308 (311)
T 3niz_A          250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH---------PYFKDLD  308 (311)
T ss_dssp             SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS---------GGGTTSC
T ss_pred             cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC---------cccccCC
Confidence                     0000000000112344678999999999999999999999999         9987543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.3e-40  Score=354.75  Aligned_cols=257  Identities=28%  Similarity=0.407  Sum_probs=212.0

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .++|+..+.||+|+||.||+|+..++..+|+|++..... ..+.+.+|++++++++||||+++++++..++..++||||+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence            367888999999999999999998888899999876533 3467899999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++|+|.+++.... ..+++.++..++.|++.||+|||+   .+++||||||+|||++.++.+||+|||+++..... ...
T Consensus        88 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~  162 (269)
T 4hcu_A           88 EHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYT  162 (269)
T ss_dssp             TTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH-HHH
T ss_pred             CCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccc-ccc
Confidence            9999999996543 468999999999999999999995   89999999999999999999999999999764321 111


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+      ........          ...
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~------~~~~~~~~----------~~~  226 (269)
T 4hcu_A          163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTG----------FRL  226 (269)
T ss_dssp             STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTT----------CCC
T ss_pred             cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH------HHHHHhcC----------ccC
Confidence            2234456788999999999999999999999999999999 888886543221      11111110          111


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ..+...+..+.+++.+||+.||.+|||++|++++|+.+.+
T Consensus       227 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          227 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence            2233345678999999999999999999999999998764

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=1.7e-40  Score=361.67  Aligned_cols=261  Identities=26%  Similarity=0.409  Sum_probs=215.1

Q ss_pred             HhcCCceeeeeeeecceEEEEEEE------cCcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCc
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEI------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE  583 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~------~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~  583 (851)
                      ..++|...+.||+|+||.||+|+.      .++..+|+|++... .....+.+.+|++++++++||||+++++++..++.
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  100 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP  100 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence            457889999999999999999986      23478999998764 44556789999999999999999999999999999


Q ss_pred             EEEEEEecCCcchhhhccCCCC----------------------CCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCC
Q 047215          584 MILVYEYMANGTLRSHLFGSDL----------------------PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVK  641 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~----------------------~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk  641 (851)
                      .++||||+++|+|.+++.....                      ..+++.++..++.|++.||+|||+   ++|+|||||
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dik  177 (314)
T 2ivs_A          101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLA  177 (314)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCS
T ss_pred             eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccc
Confidence            9999999999999999965332                      348899999999999999999995   899999999


Q ss_pred             CCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCC
Q 047215          642 TTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTL  720 (851)
Q Consensus       642 ~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~  720 (851)
                      |+|||++.++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus       178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  257 (314)
T 2ivs_A          178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP  257 (314)
T ss_dssp             GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence            9999999999999999999986543333223344567889999999999999999999999999999999 998887654


Q ss_pred             CcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       721 ~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ....   ...    ....         .....+..+++.+.+++.+||+.||.+|||+.|++++|+.+..
T Consensus       258 ~~~~---~~~----~~~~---------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          258 PERL---FNL----LKTG---------HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             GGGH---HHH----HHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHH---HHH----hhcC---------CcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            3221   111    1111         1112334556779999999999999999999999999998764

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=9.2e-41  Score=373.73  Aligned_cols=261  Identities=26%  Similarity=0.417  Sum_probs=203.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc----CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE----DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~----~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .++|+..++||+|+||.||+|+..    .+..+|||++... .....+.|.+|+.++++++||||++++++|..++..++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            367888999999999999999865    4677999998765 44556789999999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       124 v~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  199 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLED  199 (373)
T ss_dssp             EEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence            999999999999996543 468999999999999999999995   8999999999999999999999999999986433


Q ss_pred             CCcc-ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          667 MEHT-HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       667 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      .... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||......+   +   .... .        
T Consensus       200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~---~---~~~i-~--------  264 (373)
T 2qol_A          200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD---V---IKAV-D--------  264 (373)
T ss_dssp             --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH---H---HHHH-H--------
T ss_pred             CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---H---HHHH-H--------
Confidence            2111 11223345788999999999999999999999999999998 998886543211   1   1111 1        


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhh
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH  792 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  792 (851)
                       .......+..++..+.+++.+||+.||.+||+++++++.|+.+.+..
T Consensus       265 -~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~  311 (373)
T 2qol_A          265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP  311 (373)
T ss_dssp             -TTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred             -cCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence             11111223456677999999999999999999999999999887643

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=3.3e-40  Score=359.22  Aligned_cols=263  Identities=24%  Similarity=0.385  Sum_probs=215.2

Q ss_pred             HhcCCceeeeeeeecceEEEEEEE------cCcceeEEeecCCCC-hhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCC
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEI------EDCTLAAIKRANPQS-EQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQN  582 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~------~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~  582 (851)
                      ..++|...+.||+|+||.||+|+.      ..+..+|+|++.... ....+.+.+|+.+++++ +||||+++++++..++
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~  100 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence            446888999999999999999985      345789999987653 34567899999999999 9999999999999999


Q ss_pred             cEEEEEEecCCcchhhhccCCCC----------------CCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeE
Q 047215          583 EMILVYEYMANGTLRSHLFGSDL----------------PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL  646 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~----------------~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NIL  646 (851)
                      ..++||||+++|+|.+++.....                ..+++.+++.++.|++.||.|||+   .+|+||||||+|||
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil  177 (313)
T 1t46_A          101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNIL  177 (313)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEE
Confidence            99999999999999999865432                258999999999999999999996   89999999999999


Q ss_pred             EcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchh
Q 047215          647 LDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQI  725 (851)
Q Consensus       647 ld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~  725 (851)
                      ++.++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||........ 
T Consensus       178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-  256 (313)
T 1t46_A          178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-  256 (313)
T ss_dssp             EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-
T ss_pred             EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH-
Confidence            99999999999999987544333333344567889999999999999999999999999999999 8888865433211 


Q ss_pred             cHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          726 NLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       726 ~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                       ..    .....         ......+...+..+.+++.+||+.||.+|||+.|++++|+.+++.
T Consensus       257 -~~----~~~~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  308 (313)
T 1t46_A          257 -FY----KMIKE---------GFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (313)
T ss_dssp             -HH----HHHHH---------TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -HH----HHhcc---------CCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence             11    11111         111122334556799999999999999999999999999987653

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=5.8e-41  Score=374.61  Aligned_cols=263  Identities=25%  Similarity=0.352  Sum_probs=211.9

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~  584 (851)
                      .++|...+.||+|+||.||+|++.      .+..||||++... .......+.+|+.++++++||||+++++++..+...
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            367889999999999999999853      3467999998654 455566799999999999999999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCC-----CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCC---CeEEEe
Q 047215          585 ILVYEYMANGTLRSHLFGSD-----LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN---FVAKMS  656 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~-----~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~---~~~kl~  656 (851)
                      ++||||+++|+|.+++....     ...+++.+++.++.|++.||+|||+   .+|+||||||+|||++.+   ..+||+
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL~  226 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIG  226 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEEC
Confidence            99999999999999996432     2458999999999999999999996   899999999999999844   459999


Q ss_pred             eccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHh
Q 047215          657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQ  735 (851)
Q Consensus       657 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~  735 (851)
                      |||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||......+   +.   ....
T Consensus       227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~---~~---~~i~  300 (367)
T 3l9p_A          227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---VL---EFVT  300 (367)
T ss_dssp             CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---HH---HHHH
T ss_pred             CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH---HHHH
Confidence            9999974321112222334567899999999999999999999999999999998 888886543211   11   1111


Q ss_pred             hhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhh
Q 047215          736 KQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE  793 (851)
Q Consensus       736 ~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~  793 (851)
                       .+         .....+..++..+.+|+.+||+.||.+|||+.+++++|+.+.+..+
T Consensus       301 -~~---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~  348 (367)
T 3l9p_A          301 -SG---------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD  348 (367)
T ss_dssp             -TT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred             -cC---------CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence             11         1112234556679999999999999999999999999998876543

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-40  Score=367.76  Aligned_cols=264  Identities=26%  Similarity=0.434  Sum_probs=214.1

Q ss_pred             HHHHHhcCCceeeeeeeecceEEEEEEEcC------cceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEc
Q 047215          507 EIRVATNNFDESLMIGVGGFGKVFKGEIED------CTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCD  579 (851)
Q Consensus       507 ~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~------~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~  579 (851)
                      .+....++|+..+.||+|+||.||+|+..+      ++.+|+|++... .....+.+.+|+.++++++||||++++++|.
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~  120 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA  120 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            344567899999999999999999998753      478999998765 4445678999999999999999999999999


Q ss_pred             cCCcEEEEEEecCCcchhhhccCCC----------------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEE
Q 047215          580 EQNEMILVYEYMANGTLRSHLFGSD----------------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIH  637 (851)
Q Consensus       580 ~~~~~~lV~Ey~~~gsL~~~L~~~~----------------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiH  637 (851)
                      .++..++||||+++|+|.+++....                      ...+++.+++.++.|+++||+|||+   ++|+|
T Consensus       121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH  197 (343)
T 1luf_A          121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVH  197 (343)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCC
T ss_pred             cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeec
Confidence            9999999999999999999986532                      2568999999999999999999995   89999


Q ss_pred             cCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCC
Q 047215          638 RDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVI  716 (851)
Q Consensus       638 rDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~  716 (851)
                      |||||+|||++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||
T Consensus       198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  277 (343)
T 1luf_A          198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY  277 (343)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence            99999999999999999999999875332222222344568899999999999999999999999999999999 88888


Q ss_pred             CCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          717 NPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       717 ~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                      ......+      ..... ..+..         ...+..++..+.+++.+||+.||.+|||+.+++++|+.+.
T Consensus       278 ~~~~~~~------~~~~~-~~~~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~  334 (343)
T 1luf_A          278 YGMAHEE------VIYYV-RDGNI---------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  334 (343)
T ss_dssp             TTSCHHH------HHHHH-HTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CCCChHH------HHHHH-hCCCc---------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence            6543211      11111 11111         1233455677999999999999999999999999988654

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.7e-40  Score=365.31  Aligned_cols=264  Identities=23%  Similarity=0.381  Sum_probs=212.2

Q ss_pred             HHHhcCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEcc
Q 047215          509 RVATNNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDE  580 (851)
Q Consensus       509 ~~~t~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~  580 (851)
                      +...++|...+.||+|+||.||+|+..      .+..+|+|++... .....+.+.+|+.+++++ +||||+++++++..
T Consensus        41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  120 (344)
T 1rjb_A           41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL  120 (344)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence            345678999999999999999999862      3457899998754 334457899999999999 89999999999999


Q ss_pred             CCcEEEEEEecCCcchhhhccCCCC---------------------CCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcC
Q 047215          581 QNEMILVYEYMANGTLRSHLFGSDL---------------------PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD  639 (851)
Q Consensus       581 ~~~~~lV~Ey~~~gsL~~~L~~~~~---------------------~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrD  639 (851)
                      ++..++||||+++|+|.+++.....                     ..+++.+++.++.|++.||.|||+   .+|+|||
T Consensus       121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~D  197 (344)
T 1rjb_A          121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRD  197 (344)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETT
T ss_pred             CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCC
Confidence            9999999999999999999965432                     347899999999999999999995   8999999


Q ss_pred             CCCCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCC
Q 047215          640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINP  718 (851)
Q Consensus       640 lk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~  718 (851)
                      |||+|||++.++.+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||+| |+.||..
T Consensus       198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  277 (344)
T 1rjb_A          198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG  277 (344)
T ss_dssp             CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred             CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence            999999999999999999999976433222223344567889999999999999999999999999999998 9988876


Q ss_pred             CCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          719 TLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       719 ~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ......  ..    ....         .......+..+++.+.+++.+||+.||.+|||+.+++++|+.++.
T Consensus       278 ~~~~~~--~~----~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          278 IPVDAN--FY----KLIQ---------NGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             CCCSHH--HH----HHHH---------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             CCcHHH--HH----HHHh---------cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            533221  11    1111         111122334556779999999999999999999999999987654

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=4e-40  Score=366.52  Aligned_cols=252  Identities=22%  Similarity=0.298  Sum_probs=206.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh------hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE------QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~------~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~  584 (851)
                      .+.|+..+.||+|+||.||+++.. ++..+|+|.+.....      ...+.+.+|+.+|++++||||+++++++..++..
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            467999999999999999999875 578899998765432      1357899999999999999999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC----eEEEeeccc
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF----VAKMSDFGL  660 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~----~~kl~DFGl  660 (851)
                      ++||||+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++    .+||+|||+
T Consensus        91 ~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~  165 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL  165 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred             EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence            9999999999999999543  469999999999999999999995   8999999999999998776    799999999


Q ss_pred             cccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc
Q 047215          661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL  740 (851)
Q Consensus       661 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  740 (851)
                      ++.....   .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+   .   ...... ...
T Consensus       166 a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~---~---~~~i~~-~~~  235 (361)
T 2yab_A          166 AHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE---T---LANITA-VSY  235 (361)
T ss_dssp             CEECCTT---CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH---H---HHHHHT-TCC
T ss_pred             ceEcCCC---CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH---H---HHHHHh-cCC
Confidence            9864332   12345679999999999999999999999999999999999999997643211   1   111110 000


Q ss_pred             ccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                        -+++.    .....+..+++|+.+||+.||.+|||+.|+++|
T Consensus       236 --~~~~~----~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  273 (361)
T 2yab_A          236 --DFDEE----FFSQTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (361)
T ss_dssp             --CCCHH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             --CCCch----hccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence              00111    112345678999999999999999999999999

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=2.7e-40  Score=364.49  Aligned_cols=248  Identities=26%  Similarity=0.340  Sum_probs=207.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+++.. +++.+|+|++...   .......+.+|+.+|++++||||+++++++...+..++||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            67899999999999999999875 5788999988643   2334567889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++..... 
T Consensus        85 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-  158 (337)
T 1o6l_A           85 EYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-  158 (337)
T ss_dssp             ECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-
T ss_pred             eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccC-
Confidence            999999999998543  358899999999999999999995   89999999999999999999999999999853221 


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                       .......+||+.|+|||++.+..++.++|||||||++|||++|+.||.......   +   ..... ..        . 
T Consensus       159 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~---~~~i~-~~--------~-  221 (337)
T 1o6l_A          159 -GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER---L---FELIL-ME--------E-  221 (337)
T ss_dssp             -TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---H---HHHHH-HC--------C-
T ss_pred             -CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH---H---HHHHH-cC--------C-
Confidence             122345679999999999999999999999999999999999999997543211   1   11111 01        1 


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                       ..++...+..+.+++.+||+.||.+||     +++|+++|
T Consensus       222 -~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          222 -IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             -CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             -CCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence             123344556789999999999999999     99999999

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=1.8e-40  Score=364.18  Aligned_cols=262  Identities=21%  Similarity=0.339  Sum_probs=207.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-Ccce----eEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTL----AAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~----vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      ++|+..++||+|+||.||+|+.. ++..    +++|.+... .......+.+|+.++++++||||++++++|. ++..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            57888999999999999999864 3333    677776543 2344456788999999999999999999996 567899


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+++|+|.+++.... ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus        92 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~  167 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP  167 (325)
T ss_dssp             EEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred             EEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence            999999999999996542 468999999999999999999996   8999999999999999999999999999987554


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ...........||..|+|||++.+..++.++|||||||++|||++ |+.||......+.   .+.    ....       
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~~~----~~~~-------  233 (325)
T 3kex_A          168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV---PDL----LEKG-------  233 (325)
T ss_dssp             CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH---HHH----HHTT-------
T ss_pred             ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH---HHH----HHcC-------
Confidence            443334455678889999999999999999999999999999999 9999876543221   111    1111       


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhh
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAW  795 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w  795 (851)
                        .....+..++..+.+++.+||+.||.+|||+.|++++|+.+......+
T Consensus       234 --~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~~~~  281 (325)
T 3kex_A          234 --ERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRY  281 (325)
T ss_dssp             --CBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSHHHH
T ss_pred             --CCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhh
Confidence              011122334455789999999999999999999999999886554444

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=5.5e-40  Score=376.71  Aligned_cols=253  Identities=27%  Similarity=0.414  Sum_probs=209.8

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC-cEEEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN-EMILVYE  589 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~-~~~lV~E  589 (851)
                      ..++|+..+.||+|+||.||+|... ++.||||.+....  ..+.|.+|+++|++++||||++++++|.... ..++|||
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e  267 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE  267 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence            3467888999999999999999976 5689999987654  4578999999999999999999999986654 7999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      ||++|+|.+++.......+++.+++.++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++.....  
T Consensus       268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--  342 (450)
T 1k9a_A          268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--  342 (450)
T ss_dssp             CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc--
Confidence            9999999999976555557899999999999999999995   89999999999999999999999999999853221  


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                         .....++..|+|||.+.+..++.++|||||||+||||++ |+.||......+.   ..   .. ..         ..
T Consensus       343 ---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~---~~---~i-~~---------~~  403 (450)
T 1k9a_A          343 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV---VP---RV-EK---------GY  403 (450)
T ss_dssp             -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH---HH---HH-HT---------TC
T ss_pred             ---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HH---HH-Hc---------CC
Confidence               122357889999999999999999999999999999998 9988875433221   11   11 11         11


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      +...+..++..+.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus       404 ~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~  445 (450)
T 1k9a_A          404 KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT  445 (450)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence            223445667789999999999999999999999999987754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.7e-40  Score=365.64  Aligned_cols=252  Identities=25%  Similarity=0.390  Sum_probs=202.6

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCC--cceeeEEEEEccCCcEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRH--RHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H--pnIv~l~g~~~~~~~~~lV  587 (851)
                      .++|++.+.||+|+||.||++...+++.+|||++...  .....+.+.+|+.+|++++|  |||+++++++..++..++|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            4678899999999999999999888899999987643  44556789999999999976  9999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      || +.+|+|.+++...  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++ ++.+||+|||+++.....
T Consensus        88 ~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~  160 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD  160 (343)
T ss_dssp             EC-CCSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred             Ee-CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence            99 5688999999654  468899999999999999999995   8999999999999997 578999999999875433


Q ss_pred             CccccccccccCCcccCcccccc-----------cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWR-----------QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK  736 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~-----------~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~  736 (851)
                      ..........||+.|+|||++.+           ..++.++|||||||++|||++|+.||.......     .       
T Consensus       161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~-------  228 (343)
T 3dbq_A          161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-----S-------  228 (343)
T ss_dssp             ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-----H-------
T ss_pred             cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH-----H-------
Confidence            33323345679999999999865           678999999999999999999999996543211     0       


Q ss_pred             hcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       737 ~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                        .+..++++.....++...+..+.+|+.+||+.||.+|||+.|+++|
T Consensus       229 --~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          229 --KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             --HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             --HHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence              1112233333334445555678999999999999999999999999

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=3.6e-40  Score=353.86  Aligned_cols=258  Identities=27%  Similarity=0.391  Sum_probs=209.8

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ..++|+..+.||+|+||.||+|...++..+|+|++...... .+++.+|++++++++||||+++++++..++..++||||
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  100 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY  100 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence            45688999999999999999999998888999998765432 46789999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++|+|.+++.... ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... ..
T Consensus       101 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~-~~  175 (283)
T 3gen_A          101 MANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EY  175 (283)
T ss_dssp             CTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH-HH
T ss_pred             cCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEcccccccccccc-cc
Confidence            99999999996532 458999999999999999999995   89999999999999999999999999999764321 11


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                      .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+.      ......          ...
T Consensus       176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~------~~~~~~----------~~~  239 (283)
T 3gen_A          176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET------AEHIAQ----------GLR  239 (283)
T ss_dssp             HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH------HHHHHT----------TCC
T ss_pred             ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH------HHHHhc----------ccC
Confidence            12233456788999999999999999999999999999998 9888865432211      111111          111


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ...+...++.+.+++.+||+.||.+|||++|++++|+.+.+
T Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          240 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence            12233445679999999999999999999999999998764

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1e-40  Score=363.91  Aligned_cols=250  Identities=24%  Similarity=0.313  Sum_probs=198.7

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..++||+|+||+||+|+.. +++.+|||++...  .......+..|+..+.++ +||||++++++|..++..++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            67999999999999999999976 6889999987653  334444556666666665 8999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+ +++|.+++.... ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++..... 
T Consensus       137 e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-  210 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-  210 (311)
T ss_dssp             ECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred             ecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeecccC-
Confidence            999 668888875543 468999999999999999999996   89999999999999999999999999998764322 


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                        .......||+.|+|||++.+ .++.++|||||||++|||++|+.|+.....        |. ..         .....
T Consensus       211 --~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~--------~~-~~---------~~~~~  269 (311)
T 3p1a_A          211 --GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG--------WQ-QL---------RQGYL  269 (311)
T ss_dssp             ------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH--------HH-HH---------TTTCC
T ss_pred             --CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH--------HH-HH---------hccCC
Confidence              22344569999999999876 799999999999999999999776543210        10 00         00111


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      ...++...++.+.+++.+||+.||++|||++|+++|         +|+++
T Consensus       270 ~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h---------p~~~~  310 (311)
T 3p1a_A          270 PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL---------PVLRQ  310 (311)
T ss_dssp             CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS---------GGGSC
T ss_pred             CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC---------ccccC
Confidence            111122345679999999999999999999999999         88763

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.6e-39  Score=353.83  Aligned_cols=270  Identities=21%  Similarity=0.280  Sum_probs=212.4

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC--cEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN--EMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~--~~~lV~  588 (851)
                      ++|...++||+|+||.||+|+... ++.+|||++.... ....+.+.+|++++++++||||+++++++...+  ..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            578889999999999999998754 7889999987543 344577889999999999999999999987654  789999


Q ss_pred             EecCCcchhhhccCCC-CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE----cCCCeEEEeecccccc
Q 047215          589 EYMANGTLRSHLFGSD-LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL----DENFVAKMSDFGLSKT  663 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~-~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl----d~~~~~kl~DFGla~~  663 (851)
                      ||+++|+|.+++.... ...+++.++..++.|++.||.|||+   .+|+||||||+|||+    +.++.+||+|||+++.
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~  165 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (319)
T ss_dssp             ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred             eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence            9999999999996643 2348999999999999999999995   899999999999999    8888999999999986


Q ss_pred             CCCCCccccccccccCCcccCccccc--------ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcch-hcHHHHHHHH
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFW--------RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ-INLADWAMKW  734 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~-~~l~~~~~~~  734 (851)
                      .....   ......||+.|+|||++.        +..++.++|||||||++|||++|+.||........ ..........
T Consensus       166 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  242 (319)
T 4euu_A          166 LEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG  242 (319)
T ss_dssp             CCTTC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred             cCCCC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence            43322   223456999999999986        57889999999999999999999999976433222 1111111111


Q ss_pred             hhhccccccc-----------CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          735 QKQRSLKSII-----------DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       735 ~~~~~~~~i~-----------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      ........+.           +.......+......+.+++.+||+.||++|||++|+++|..+.
T Consensus       243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence            1111111000           01112245678888999999999999999999999999997643

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.1e-40  Score=360.87  Aligned_cols=258  Identities=21%  Similarity=0.320  Sum_probs=209.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh------hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE------QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~------~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      ++|...+.||+|+||.||+++.. ++..+|+|.+.....      ...+.+.+|+.+|++++||||+++++++..++..+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            56889999999999999999875 578899998765422      23578999999999999999999999999999999


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC----eEEEeecccc
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF----VAKMSDFGLS  661 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~----~~kl~DFGla  661 (851)
                      +||||+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++    .+||+|||++
T Consensus        91 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a  165 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  165 (326)
T ss_dssp             EEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence            999999999999999543  468999999999999999999995   8999999999999998877    8999999999


Q ss_pred             ccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK  741 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  741 (851)
                      +......   ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.      ........   
T Consensus       166 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~------~~~~~~~~---  233 (326)
T 2y0a_A          166 HKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET------LANVSAVN---  233 (326)
T ss_dssp             EECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH------HHHHHHTC---
T ss_pred             eECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH------HHHHHhcC---
Confidence            8643221   22345799999999999999999999999999999999999999875432211      11111000   


Q ss_pred             cccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCC
Q 047215          742 SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDD  800 (851)
Q Consensus       742 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~  800 (851)
                          ...........+..+.+|+.+||+.||.+|||++|+++|         +|+...+
T Consensus       234 ----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h---------p~~~~~~  279 (326)
T 2y0a_A          234 ----YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH---------PWIKPKD  279 (326)
T ss_dssp             ----CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS---------TTTSCCS
T ss_pred             ----CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC---------CCccCCc
Confidence                000000112345668999999999999999999999999         8886543

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=1.1e-40  Score=383.00  Aligned_cols=256  Identities=24%  Similarity=0.399  Sum_probs=211.1

Q ss_pred             HHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          510 VATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       510 ~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ...++|+..+.||+|+||.||+|+.+++..||||++.... ...+.|.+|+.+|++++||||+++++++. .+..++|||
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e  262 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE  262 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred             echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence            3457788899999999999999999888889999987654 34678999999999999999999999997 567899999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++|+|.++|.......+++.+++.++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++..... .
T Consensus       263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~-~  338 (454)
T 1qcf_A          263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDN-E  338 (454)
T ss_dssp             CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH-H
T ss_pred             ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC-c
Confidence            9999999999976544468889999999999999999996   89999999999999999999999999999864321 1


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                      ........+|..|+|||++....++.++|||||||+||||++ |+.||......+   +.   .... .+         .
T Consensus       339 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~---~~---~~i~-~~---------~  402 (454)
T 1qcf_A          339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE---VI---RALE-RG---------Y  402 (454)
T ss_dssp             HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---HH---HHHH-HT---------C
T ss_pred             eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH---HH---HHHH-cC---------C
Confidence            111233456789999999999999999999999999999999 998886543221   11   1111 11         1


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      ....+..+++.+.+|+.+||+.||.+|||++++++.|+.
T Consensus       403 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~  441 (454)
T 1qcf_A          403 RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  441 (454)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence            112344567789999999999999999999999999874

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-39  Score=364.67  Aligned_cols=260  Identities=20%  Similarity=0.313  Sum_probs=213.8

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      .++|+..+.||+|+||.||+|... ++..+|+|.+..........+.+|+.+|++++||||+++++++..++..++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            367999999999999999999875 5778999998877666667899999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc--CCCeEEEeeccccccCCCCC
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD--ENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld--~~~~~kl~DFGla~~~~~~~  668 (851)
                      +++|+|.+++.... ..+++.++..++.|++.||.|||+   .+|+||||||+|||++  .++.+||+|||+++......
T Consensus       130 ~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~  205 (387)
T 1kob_A          130 LSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE  205 (387)
T ss_dssp             CCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred             CCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence            99999999986543 468999999999999999999995   8999999999999997  45789999999998643322


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                         ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+   .   ........       ...
T Consensus       206 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~---~---~~~i~~~~-------~~~  269 (387)
T 1kob_A          206 ---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE---T---LQNVKRCD-------WEF  269 (387)
T ss_dssp             ---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH---H---HHHHHHCC-------CCC
T ss_pred             ---ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH---H---HHHHHhCC-------CCC
Confidence               2334579999999999999999999999999999999999999997543211   1   11111100       011


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCC
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDD  800 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~  800 (851)
                      ........+..+.+|+.+||+.||.+|||+.|+++|         +|+....
T Consensus       270 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h---------p~~~~~~  312 (387)
T 1kob_A          270 DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH---------PWLKGDH  312 (387)
T ss_dssp             CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS---------TTTSSCC
T ss_pred             CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC---------ccccCCc
Confidence            111223455678999999999999999999999999         8887543

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=3.3e-40  Score=383.02  Aligned_cols=257  Identities=22%  Similarity=0.386  Sum_probs=214.4

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ...+|...++||+|+||.||+|++.. +..||||.+.... ...+.|.+|+.+|++++||||++++++|..++..+||||
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E  296 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE  296 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence            34678889999999999999999875 6789999987653 346789999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      ||++|+|.++|.......+++..++.++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++...... 
T Consensus       297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-  372 (495)
T 1opk_A          297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-  372 (495)
T ss_dssp             CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-
T ss_pred             ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCc-
Confidence            9999999999976656679999999999999999999995   899999999999999999999999999998753322 


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                      ........++..|+|||++....++.++|||||||+||||++ |+.||......+   +.+.             +....
T Consensus       373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~~~~-------------~~~~~  436 (495)
T 1opk_A          373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYEL-------------LEKDY  436 (495)
T ss_dssp             EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHH-------------HHTTC
T ss_pred             eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---HHHH-------------HHcCC
Confidence            122234456789999999999999999999999999999999 888886543221   1111             11122


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      ....+..++..+.+|+.+||+.||.+|||+.++++.|+.+
T Consensus       437 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~  476 (495)
T 1opk_A          437 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  476 (495)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            2234456677899999999999999999999999998743

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=4.2e-40  Score=354.74  Aligned_cols=267  Identities=22%  Similarity=0.310  Sum_probs=205.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCCh--hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSE--QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++|+..+.||+|+||.||+|+...++.+|+|++.....  .....+.+|++++++++||||+++++++..++..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            47888999999999999999988788999998865432  2346788999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++ +|.+++.... ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.....  .
T Consensus        82 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~  154 (288)
T 1ob3_A           82 LDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIP--V  154 (288)
T ss_dssp             CSE-EHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred             cCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCcc--c
Confidence            985 8988886543 468899999999999999999995   89999999999999999999999999998753221  1


Q ss_pred             ccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcc---cc---c-
Q 047215          671 HVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS---LK---S-  742 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~---~-  742 (851)
                      .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+.  +.. .........   ..   . 
T Consensus       155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~  231 (288)
T 1ob3_A          155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ--LMR-IFRILGTPNSKNWPNVTEL  231 (288)
T ss_dssp             -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHH-HHHHHCCCCTTTSTTGGGS
T ss_pred             cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHH-HHHHHCCCChhhchhhhcc
Confidence            12234568999999999976 4589999999999999999999999875432221  111 111100000   00   0 


Q ss_pred             -ccCccCC-------CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          743 -IIDPHLK-------GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       743 -i~d~~l~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                       ..++...       ..+....++.+.+|+.+||+.||++|||++|+++|         +|++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h---------p~f~~  286 (288)
T 1ob3_A          232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH---------AYFKE  286 (288)
T ss_dssp             TTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS---------GGGGC
T ss_pred             cccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC---------cchhh
Confidence             0011110       01123456778999999999999999999999999         88864

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=2.2e-40  Score=362.79  Aligned_cols=269  Identities=23%  Similarity=0.369  Sum_probs=198.7

Q ss_pred             HHHHhcCCceeeeeeeecceEEEEEEEcCcc----eeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC
Q 047215          508 IRVATNNFDESLMIGVGGFGKVFKGEIEDCT----LAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ  581 (851)
Q Consensus       508 l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~~----~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~  581 (851)
                      +....++|+..+.||+|+||.||+|+.....    .+|||++...  .....+.+.+|++++++++||||+++++++...
T Consensus        18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   97 (323)
T 3qup_A           18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS   97 (323)
T ss_dssp             TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred             cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence            3345678999999999999999999865432    7899988764  445567899999999999999999999999776


Q ss_pred             CcE------EEEEEecCCcchhhhccCC----CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC
Q 047215          582 NEM------ILVYEYMANGTLRSHLFGS----DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF  651 (851)
Q Consensus       582 ~~~------~lV~Ey~~~gsL~~~L~~~----~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~  651 (851)
                      ...      ++||||+++|+|.+++...    ....+++.++..++.|++.||.|||+   .+|+||||||+|||++.++
T Consensus        98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~  174 (323)
T 3qup_A           98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDM  174 (323)
T ss_dssp             -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTS
T ss_pred             ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCC
Confidence            655      9999999999999998532    22358999999999999999999996   8999999999999999999


Q ss_pred             eEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHH
Q 047215          652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADW  730 (851)
Q Consensus       652 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~  730 (851)
                      .+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |+.||......+.   .. 
T Consensus       175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~---~~-  250 (323)
T 3qup_A          175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI---YN-  250 (323)
T ss_dssp             CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---HH-
T ss_pred             CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH---HH-
Confidence            999999999986443333233334557889999999999999999999999999999999 8888876443221   11 


Q ss_pred             HHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcc
Q 047215          731 AMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMR  797 (851)
Q Consensus       731 ~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~  797 (851)
                        .....          .....+..++..+.+++.+||+.||.+|||+.++++.|+.++.-  +|..
T Consensus       251 --~~~~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~--~~~~  303 (323)
T 3qup_A          251 --YLIGG----------NRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH--LSVL  303 (323)
T ss_dssp             --HHHTT----------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred             --HHhcC----------CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH--hhhc
Confidence              11000          01123345567799999999999999999999999999988754  5554

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=6.5e-40  Score=360.18  Aligned_cols=265  Identities=22%  Similarity=0.359  Sum_probs=207.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-Ccce----eEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTL----AAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~----vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      .++|+..++||+|+||.||+|+.. ++..    +++|.+... .....+.+.+|+.++++++||||++++++|..+. .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            367999999999999999999864 3433    467766543 4455678999999999999999999999998754 88


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      +|+||+++|+|.+++.... ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        93 ~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~  168 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             EEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred             EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence            9999999999999986543 468999999999999999999995   899999999999999999999999999998654


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      ............+|+.|+|||.+.+..++.++|||||||++|||++ |+.||......+.   ...             +
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~---~~~-------------~  232 (327)
T 3lzb_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---SSI-------------L  232 (327)
T ss_dssp             -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---HHH-------------H
T ss_pred             CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH---HHH-------------H
Confidence            3333333344557889999999999999999999999999999999 9999876543321   111             1


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcc
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMR  797 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~  797 (851)
                      ........+..++..+.+++.+||+.||.+|||+.|+++.|+.+.+....+..
T Consensus       233 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~  285 (327)
T 3lzb_A          233 EKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLV  285 (327)
T ss_dssp             HTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSHHHHBC
T ss_pred             HcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCcCceEE
Confidence            11111223445666799999999999999999999999999998876665544

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=8.6e-40  Score=367.98  Aligned_cols=276  Identities=18%  Similarity=0.262  Sum_probs=211.3

Q ss_pred             hcCCceeeeeeee--cceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          512 TNNFDESLMIGVG--GFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       512 t~~f~~~~~LG~G--~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .++|+..++||+|  +||.||+|+.. +++.||||++...  .....+.+.+|+.++++++||||+++++++..++..++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            3678999999999  99999999976 6788999988654  34556778899999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      |||||++|+|.+++.......+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||++.....
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~  180 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS  180 (389)
T ss_dssp             EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred             EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence            9999999999999977655679999999999999999999995   8999999999999999999999999998764321


Q ss_pred             CC-----ccccccccccCCcccCcccccc--cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHh---h
Q 047215          667 ME-----HTHVSTAVKGSFGYLDPEYFWR--QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ---K  736 (851)
Q Consensus       667 ~~-----~~~~~~~~~gt~~y~aPE~~~~--~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~---~  736 (851)
                      ..     .........||+.|+|||++.+  ..++.++|||||||++|||++|+.||........... .+.....   .
T Consensus       181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~  259 (389)
T 3gni_B          181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE-KLNGTVPCLLD  259 (389)
T ss_dssp             TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHH-C----------
T ss_pred             ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH-HhcCCCCcccc
Confidence            11     1111233468999999999987  6899999999999999999999999976443322100 0000000   0


Q ss_pred             ------------------hccccccc---Cc------cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          737 ------------------QRSLKSII---DP------HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       737 ------------------~~~~~~i~---d~------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                                        ........   .+      ......+...+..+.+|+.+||+.||.+|||++|+++|     
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h-----  334 (389)
T 3gni_B          260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH-----  334 (389)
T ss_dssp             ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS-----
T ss_pred             ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC-----
Confidence                              00000000   00      00011233455679999999999999999999999999     


Q ss_pred             HhhhhhcccCC
Q 047215          790 QLHEAWMRTDD  800 (851)
Q Consensus       790 ~~~~~w~~~~~  800 (851)
                          +|++...
T Consensus       335 ----p~f~~~~  341 (389)
T 3gni_B          335 ----SFFKQIK  341 (389)
T ss_dssp             ----GGGGGC-
T ss_pred             ----HHHHHHh
Confidence                8886543

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=7.6e-40  Score=356.82  Aligned_cols=271  Identities=23%  Similarity=0.403  Sum_probs=217.6

Q ss_pred             cCHHHHHHHhcCCceeeeeeeecceEEEEEEE------cCcceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeE
Q 047215          503 FTLAEIRVATNNFDESLMIGVGGFGKVFKGEI------EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSL  574 (851)
Q Consensus       503 ~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~------~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l  574 (851)
                      +...++....++|...+.||+|+||.||+|+.      .+++.+|||++... .....+.+.+|+.+++++ +||||+++
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            34455566678999999999999999999975      34578999998765 334556799999999999 79999999


Q ss_pred             EEEEccCC-cEEEEEEecCCcchhhhccCCCC--------------CCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcC
Q 047215          575 IGFCDEQN-EMILVYEYMANGTLRSHLFGSDL--------------PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD  639 (851)
Q Consensus       575 ~g~~~~~~-~~~lV~Ey~~~gsL~~~L~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrD  639 (851)
                      ++++...+ ..++||||+++|+|.+++.....              ..+++.++..++.|++.||.|||+   .+|+|||
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~d  173 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD  173 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCccccc
Confidence            99987654 58999999999999999966442              238899999999999999999996   8999999


Q ss_pred             CCCCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCC
Q 047215          640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINP  718 (851)
Q Consensus       640 lk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~  718 (851)
                      |||+|||++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus       174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~  253 (316)
T 2xir_A          174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  253 (316)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence            999999999999999999999986543333233345568899999999999999999999999999999998 8888865


Q ss_pred             CCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          719 TLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       719 ~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      ......  +   .... ..+.         ....+...+..+.+++.+||+.||.+|||+.|++++|+.+++.
T Consensus       254 ~~~~~~--~---~~~~-~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  311 (316)
T 2xir_A          254 VKIDEE--F---CRRL-KEGT---------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  311 (316)
T ss_dssp             CCCSHH--H---HHHH-HHTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cchhHH--H---HHHh-ccCc---------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            432221  1   1111 1110         1112334456789999999999999999999999999988753

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=7.3e-40  Score=354.51  Aligned_cols=249  Identities=25%  Similarity=0.358  Sum_probs=197.5

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh--------------------------hhHHHHHHHHHHHHh
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE--------------------------QGLAEFETEIEMLSK  565 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~Ei~~l~~  565 (851)
                      ++|...+.||+|+||.||+|+.. +++.+|||++.....                          ...+.+.+|++++++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   92 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK   92 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence            67899999999999999999864 578899998765421                          123568899999999


Q ss_pred             cCCcceeeEEEEEcc--CCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCC
Q 047215          566 LRHRHLVSLIGFCDE--QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTT  643 (851)
Q Consensus       566 l~HpnIv~l~g~~~~--~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~  643 (851)
                      ++||||+++++++..  .+..++||||+++++|.+++..   .++++.++..++.|++.||+|||+   .+|+||||||+
T Consensus        93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~  166 (298)
T 2zv2_A           93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPS  166 (298)
T ss_dssp             CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred             CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHH
Confidence            999999999999976  5689999999999999987633   468999999999999999999996   89999999999


Q ss_pred             CeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccC---CCchHHHHHHHHHHHHHHhCCcCCCCCC
Q 047215          644 NILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCARAVINPTL  720 (851)
Q Consensus       644 NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~t~ksDVwS~GvvL~eLltG~~p~~~~~  720 (851)
                      |||++.++.+||+|||+++......  .......||+.|+|||.+.+..   ++.++|||||||++|||++|+.||....
T Consensus       167 Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  244 (298)
T 2zv2_A          167 NLLVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER  244 (298)
T ss_dssp             GEEECTTSCEEECCCTTCEECSSSS--CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HEEECCCCCEEEecCCCcccccccc--ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence            9999999999999999997643321  1234457999999999998665   4789999999999999999999986532


Q ss_pred             CcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       721 ~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .      ..+...... .        .+.....+..++.+.+++.+||+.||.+|||+.|+++|
T Consensus       245 ~------~~~~~~~~~-~--------~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          245 I------MCLHSKIKS-Q--------ALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH  293 (298)
T ss_dssp             H------HHHHHHHHH-C--------CCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred             H------HHHHHHHhc-c--------cCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence            1      111111111 1        01111123445679999999999999999999999999

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=9.6e-40  Score=359.75  Aligned_cols=264  Identities=24%  Similarity=0.453  Sum_probs=215.2

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc--------CcceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEcc
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE--------DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDE  580 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~--------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~  580 (851)
                      ..++|...+.||+|+||.||+|+..        ++..+|+|++... .......+.+|+++++++ +||||+++++++..
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            3578999999999999999999863        4567999998765 445567899999999999 89999999999999


Q ss_pred             CCcEEEEEEecCCcchhhhccCCCC--------------CCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeE
Q 047215          581 QNEMILVYEYMANGTLRSHLFGSDL--------------PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL  646 (851)
Q Consensus       581 ~~~~~lV~Ey~~~gsL~~~L~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NIL  646 (851)
                      ++..++||||+++|+|.+++.....              ..+++.+++.++.|++.||.|||+   .+|+||||||+|||
T Consensus       113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl  189 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL  189 (334)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEE
T ss_pred             CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEE
Confidence            9999999999999999999965432              348899999999999999999995   89999999999999


Q ss_pred             EcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchh
Q 047215          647 LDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQI  725 (851)
Q Consensus       647 ld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~  725 (851)
                      ++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+  
T Consensus       190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--  267 (334)
T 2pvf_A          190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--  267 (334)
T ss_dssp             ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--
T ss_pred             EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH--
Confidence            99999999999999986544332223344567889999999998899999999999999999999 888886542211  


Q ss_pred             cHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhh
Q 047215          726 NLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE  793 (851)
Q Consensus       726 ~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~  793 (851)
                          ...... .+         .....+..++..+.+++.+||+.||.+|||+.|++++|+.++....
T Consensus       268 ----~~~~~~-~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~  321 (334)
T 2pvf_A          268 ----LFKLLK-EG---------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT  321 (334)
T ss_dssp             ----HHHHHH-HT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             ----HHHHHh-cC---------CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence                111111 11         0112234556679999999999999999999999999999887543

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=4.6e-40  Score=350.14  Aligned_cols=256  Identities=25%  Similarity=0.387  Sum_probs=210.1

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ..++|+..+.||+|+||.||+|+..++..+|+|++..... ..+++.+|++++++++||||+++++++..++..++||||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY   84 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence            3467889999999999999999998888899999876543 346789999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++.... ..+++.++..++.|++.||+|||+   .+++||||||+|||++.++.+||+|||+++...... .
T Consensus        85 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~  159 (268)
T 3sxs_A           85 ISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-Y  159 (268)
T ss_dssp             CTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC-E
T ss_pred             cCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhh-h
Confidence            99999999986532 358899999999999999999995   899999999999999999999999999998644322 1


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                      .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.......      .........          .
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~~~~~~----------~  223 (268)
T 3sxs_A          160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE------VVLKVSQGH----------R  223 (268)
T ss_dssp             EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HHHHHHTTC----------C
T ss_pred             hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH------HHHHHHcCC----------C
Confidence            22234456778999999999899999999999999999999 888886543221      111111100          1


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      ...+...++.+.+++.+||+.||.+|||+.|++++|+.+
T Consensus       224 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l  262 (268)
T 3sxs_A          224 LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL  262 (268)
T ss_dssp             CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGG
T ss_pred             CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence            111233456789999999999999999999999998754

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=8.7e-40  Score=348.40  Aligned_cols=250  Identities=27%  Similarity=0.481  Sum_probs=196.8

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCC----hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQS----EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      .++|+..+.||+|+||.||+|... +..+|+|++....    ....+.+.+|++++++++||||+++++++..++..++|
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            367889999999999999999975 6788999876542    23356789999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCC---eEEcCCCCCCeEEcC--------CCeEEEe
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG---IIHRDVKTTNILLDE--------NFVAKMS  656 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~---iiHrDlk~~NILld~--------~~~~kl~  656 (851)
                      |||+++++|.+++..   ..+++.++..++.|++.||.|||+   .+   ++||||||+|||++.        ++.+||+
T Consensus        85 ~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~  158 (271)
T 3dtc_A           85 MEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT  158 (271)
T ss_dssp             EECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred             EEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence            999999999999854   358999999999999999999996   55   999999999999986        7789999


Q ss_pred             eccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh
Q 047215          657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK  736 (851)
Q Consensus       657 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~  736 (851)
                      |||+++.....    ......||+.|+|||.+.+..++.++||||||++++||++|+.||........      ...   
T Consensus       159 Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------~~~---  225 (271)
T 3dtc_A          159 DFGLAREWHRT----TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV------AYG---  225 (271)
T ss_dssp             CCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH------HHH---
T ss_pred             cCCcccccccc----cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHh---
Confidence            99999753321    12245689999999999999999999999999999999999999875432111      111   


Q ss_pred             hcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       737 ~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                            +.........+..+++.+.+++.+||+.||.+|||+.|++++|+.
T Consensus       226 ------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          226 ------VAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             ------HHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             ------hhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence                  111122223345566779999999999999999999999999874

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=1.4e-40  Score=378.77  Aligned_cols=271  Identities=20%  Similarity=0.259  Sum_probs=215.9

Q ss_pred             CHHHHHHHhcCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEc
Q 047215          504 TLAEIRVATNNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCD  579 (851)
Q Consensus       504 ~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~  579 (851)
                      .+.+++...++|+..++||+|+||+||+|+... ++.+|+|++....   ......+.+|+.++.+++||||++++++|.
T Consensus        65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  144 (437)
T 4aw2_A           65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ  144 (437)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            456677778999999999999999999999764 6789999886421   122334889999999999999999999999


Q ss_pred             cCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecc
Q 047215          580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG  659 (851)
Q Consensus       580 ~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFG  659 (851)
                      +++.++||||||++|+|.++|... ...+++..+..++.|++.||+|||+   .+||||||||+||||+.++.+||+|||
T Consensus       145 ~~~~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFG  220 (437)
T 4aw2_A          145 DDNNLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFG  220 (437)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             eCCEEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchh
Confidence            999999999999999999999653 2468999999999999999999995   899999999999999999999999999


Q ss_pred             ccccCCCCCccccccccccCCcccCccccc-----ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHH
Q 047215          660 LSKTGPSMEHTHVSTAVKGSFGYLDPEYFW-----RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW  734 (851)
Q Consensus       660 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~  734 (851)
                      +++..... ........+||+.|+|||++.     ...++.++|||||||++|||++|+.||......+.   .   ...
T Consensus       221 la~~~~~~-~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~---~---~~i  293 (437)
T 4aw2_A          221 SCLKLMED-GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET---Y---GKI  293 (437)
T ss_dssp             TCEECCTT-SCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---H---HHH
T ss_pred             hhhhcccC-CCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH---H---Hhh
Confidence            99764332 222234467999999999997     45789999999999999999999999976432211   1   111


Q ss_pred             hhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCC--CCCHHHHHHHHHHHHHhhhhhcccCC
Q 047215          735 QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKN--RPTMGEVLWHLEYVLQLHEAWMRTDD  800 (851)
Q Consensus       735 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~L~~~~~~~~~w~~~~~  800 (851)
                      ....  ....-|..    ....++.+++|+.+||..+|++  ||+++|+++|         +|++.-+
T Consensus       294 ~~~~--~~~~~p~~----~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H---------pff~~i~  346 (437)
T 4aw2_A          294 MNHK--ERFQFPTQ----VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH---------PFFSGID  346 (437)
T ss_dssp             HTHH--HHCCCCSS----CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS---------GGGTTCC
T ss_pred             hhcc--ccccCCcc----cccCCHHHHHHHHHHhcccccccCCCCHHHHhCC---------CccCCCC
Confidence            1100  00111111    1234566899999999888888  9999999999         8876544

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=1.2e-39  Score=349.59  Aligned_cols=258  Identities=24%  Similarity=0.344  Sum_probs=200.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC----cceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED----CTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~----~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .++|+..+.||+|+||.||+|....    +..+|+|+.... .....+.+.+|+.++++++||||+++++++. ++..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l   92 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   92 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence            4678899999999999999998643    356899987764 4455678999999999999999999999985 467899


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+++|+|.+++.... ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++....
T Consensus        93 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  168 (281)
T 1mp8_A           93 IMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  168 (281)
T ss_dssp             EEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred             EEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccCc
Confidence            999999999999996543 468999999999999999999995   8999999999999999999999999999986433


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+.   ...   .. ..       
T Consensus       169 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~---~~~---i~-~~-------  233 (281)
T 1mp8_A          169 STY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV---IGR---IE-NG-------  233 (281)
T ss_dssp             -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---HHH---HH-TT-------
T ss_pred             ccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH---HHH---HH-cC-------
Confidence            211 12233456789999999999999999999999999999997 8888876543221   111   10 10       


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                        .....+..++..+.+++.+||+.||.+|||+.|++++|+.+++.
T Consensus       234 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  277 (281)
T 1mp8_A          234 --ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  277 (281)
T ss_dssp             --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             --CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence              01123445667799999999999999999999999999988754

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=2.1e-40  Score=374.40  Aligned_cols=267  Identities=22%  Similarity=0.277  Sum_probs=213.6

Q ss_pred             HHHHHHHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc
Q 047215          505 LAEIRVATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE  580 (851)
Q Consensus       505 ~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~  580 (851)
                      +.+++...++|+..++||+|+||.||+|+.. +++.+|+|++...   .......+.+|+.+++.++||||+++++++.+
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            4456667789999999999999999999975 4678999987642   11223457899999999999999999999999


Q ss_pred             CCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccc
Q 047215          581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL  660 (851)
Q Consensus       581 ~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGl  660 (851)
                      ++.++|||||+++|+|.+++...   .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~  214 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGT  214 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccce
Confidence            99999999999999999998653   48899999999999999999995   8999999999999999999999999999


Q ss_pred             cccCCCCCccccccccccCCcccCcccccccC----CCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh
Q 047215          661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ----LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK  736 (851)
Q Consensus       661 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~  736 (851)
                      ++...... .......+||+.|+|||++.+..    ++.++|||||||+||||++|+.||......+.      ......
T Consensus       215 a~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~------~~~i~~  287 (410)
T 3v8s_A          215 CMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT------YSKIMN  287 (410)
T ss_dssp             CEECCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHT
T ss_pred             eEeeccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH------HHHHHh
Confidence            97643322 12234568999999999998765    88999999999999999999999975432211      111111


Q ss_pred             hcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCC--CCCHHHHHHHHHHHHHhhhhhcccCC
Q 047215          737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKN--RPTMGEVLWHLEYVLQLHEAWMRTDD  800 (851)
Q Consensus       737 ~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~L~~~~~~~~~w~~~~~  800 (851)
                      ...  .     +........+..+++|+.+||+.+|.+  ||+++|+++|         +|++..+
T Consensus       288 ~~~--~-----~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H---------p~f~~~~  337 (410)
T 3v8s_A          288 HKN--S-----LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH---------LFFKNDQ  337 (410)
T ss_dssp             HHH--H-----CCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS---------GGGCCSS
T ss_pred             ccc--c-----ccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC---------ccccCCC
Confidence            000  0     000111234567899999999999988  9999999999         8876543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=3e-40  Score=366.55  Aligned_cols=249  Identities=25%  Similarity=0.360  Sum_probs=203.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~l  586 (851)
                      -++|+..++||+|+||.||+|+.. +++.+|+|++...   .......+.+|..+++++ +||||+++++++...+..++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            478999999999999999999875 5788999988653   233456788999999998 79999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+++|+|.+++...  ..+++.++..++.|++.||+|||+   .+|+||||||+||||+.++.+||+|||+++....
T Consensus       102 v~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~  176 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC  176 (353)
T ss_dssp             EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence            99999999999998554  358999999999999999999995   8999999999999999999999999999985322


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                        ........+||+.|+|||++.+..++.++|||||||++|||++|+.||......+   +   .....         ..
T Consensus       177 --~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~---~---~~~i~---------~~  239 (353)
T 3txo_A          177 --NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD---L---FEAIL---------ND  239 (353)
T ss_dssp             -----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---H---HHHHH---------HC
T ss_pred             --CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH---H---HHHHH---------cC
Confidence              1223445689999999999999999999999999999999999999997643221   1   11111         11


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCH------HHHHHH
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTM------GEVLWH  784 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~------~evl~~  784 (851)
                      .  ..++...+..+.+++.+||+.||.+||++      +|+++|
T Consensus       240 ~--~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h  281 (353)
T 3txo_A          240 E--VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH  281 (353)
T ss_dssp             C--CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred             C--CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence            1  12233455678999999999999999998      899999

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=4.8e-40  Score=353.65  Aligned_cols=261  Identities=23%  Similarity=0.383  Sum_probs=217.8

Q ss_pred             HHhcCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          510 VATNNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       510 ~~t~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ...++|+..+.||+|+||.||+|.... +..+|+|.+.... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus        10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   88 (288)
T 3kfa_A           10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   88 (288)
T ss_dssp             CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence            355789999999999999999999765 6788999887543 34678999999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++++|.+++.......+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++......
T Consensus        89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  165 (288)
T 3kfa_A           89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  165 (288)
T ss_dssp             ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred             EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence            99999999999977666779999999999999999999995   899999999999999999999999999998654322


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                       ........+|+.|+|||.+.+..++.++||||||+++|||++ |+.|+........   .+.             +...
T Consensus       166 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~---~~~-------------~~~~  228 (288)
T 3kfa_A          166 -YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YEL-------------LEKD  228 (288)
T ss_dssp             -SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH---HHH-------------HHTT
T ss_pred             -cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHH-------------Hhcc
Confidence             223344557889999999999999999999999999999999 8888865433221   111             1111


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      .....+..+++.+.+++.+||+.||.+|||+.|+++.|+.+.+.
T Consensus       229 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~  272 (288)
T 3kfa_A          229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  272 (288)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence            12223445567799999999999999999999999999877653

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=1.6e-39  Score=351.81  Aligned_cols=264  Identities=22%  Similarity=0.329  Sum_probs=201.7

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHh--cCCcceeeEEEEEcc----CCcEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSK--LRHRHLVSLIGFCDE----QNEMI  585 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~--l~HpnIv~l~g~~~~----~~~~~  585 (851)
                      .++|+..+.||+|+||.||+|+. +++.+|||++...   ....+..|.+++..  ++||||+++++++..    ....+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            46899999999999999999987 5778999998653   33456667777766  799999999998643    45689


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCC-----CCCeEEcCCCCCCeEEcCCCeEEEeeccc
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA-----ERGIIHRDVKTTNILLDENFVAKMSDFGL  660 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~-----~~~iiHrDlk~~NILld~~~~~kl~DFGl  660 (851)
                      +||||+++|+|.+++..   ..+++.++++++.|++.||+|||+..     +++|+||||||+|||++.++.+||+|||+
T Consensus        83 lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  159 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL  159 (301)
T ss_dssp             EEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             EehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCC
Confidence            99999999999999954   35899999999999999999999211     38999999999999999999999999999


Q ss_pred             cccCCCCCcc--ccccccccCCcccCccccccc------CCCchHHHHHHHHHHHHHHhC----------CcCCCCCCCc
Q 047215          661 SKTGPSMEHT--HVSTAVKGSFGYLDPEYFWRQ------QLTEKSDVYSFGVVLFEVVCA----------RAVINPTLPK  722 (851)
Q Consensus       661 a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~t~ksDVwS~GvvL~eLltG----------~~p~~~~~~~  722 (851)
                      ++........  .......||+.|+|||++.+.      .++.++|||||||++|||++|          +.||....+.
T Consensus       160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~  239 (301)
T 3q4u_A          160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN  239 (301)
T ss_dssp             CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence            8753222111  112334799999999999876      456799999999999999999          7777654333


Q ss_pred             chhcHHHHHHHHhhhcccccccCccCCC-CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          723 DQINLADWAMKWQKQRSLKSIIDPHLKG-NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       723 ~~~~l~~~~~~~~~~~~~~~i~d~~l~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      ... ...........     ...+.+.. ..+..++..+.+++.+||+.||.+|||+.|+++.|+.+
T Consensus       240 ~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          240 DPS-FEDMRKVVCVD-----QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             SCC-HHHHHHHHTTS-----CCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             Ccc-hhhhhHHHhcc-----CCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            221 11111111111     11111111 12345778899999999999999999999999998864

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-39  Score=357.30  Aligned_cols=252  Identities=17%  Similarity=0.240  Sum_probs=206.4

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      .++|...+.||+|+||.||+|+.. ++..+|+|.+.... .....+.+|+.++++++||||+++++++...+..++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            468999999999999999999875 56788999887543 3456789999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC--CCeEEEeeccccccCCCCC
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE--NFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~--~~~~kl~DFGla~~~~~~~  668 (851)
                      +++|+|.+++.... ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.  ++.+||+|||+++......
T Consensus        83 ~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~  158 (321)
T 1tki_A           83 ISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD  158 (321)
T ss_dssp             CCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred             CCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence            99999999985533 468999999999999999999995   89999999999999986  7899999999998643322


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                         ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+      ......... .  ..++. 
T Consensus       159 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~-~--~~~~~-  225 (321)
T 1tki_A          159 ---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ------IIENIMNAE-Y--TFDEE-  225 (321)
T ss_dssp             ---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTC-C--CCCHH-
T ss_pred             ---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH------HHHHHHcCC-C--CCChh-
Confidence               2344678999999999998889999999999999999999999997643221      111111110 0  00000 


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                         .....+..+.+++.+||+.||.+|||+.|+++|
T Consensus       226 ---~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          226 ---AFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             ---HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ---hhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence               012345678999999999999999999999999

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=8.8e-40  Score=367.98  Aligned_cols=251  Identities=25%  Similarity=0.386  Sum_probs=202.0

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcC--CcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLR--HRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~--HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      .+|...+.||+|+||.||++...+++.+|||++...  .....+.+.+|+.+|++++  ||||+++++++..++..+|||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            468999999999999999999888889999987643  4455678999999999996  599999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      | +.+++|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++ ++.+||+|||+++......
T Consensus       136 E-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~  208 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT  208 (390)
T ss_dssp             E-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred             e-cCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence            9 6788999999654  368889999999999999999995   8999999999999995 5789999999998654332


Q ss_pred             ccccccccccCCcccCcccccc-----------cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWR-----------QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ  737 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~-----------~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~  737 (851)
                      .........||+.|+|||++.+           ..++.++|||||||+||||++|+.||.......     ..       
T Consensus       209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-----~~-------  276 (390)
T 2zmd_A          209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-----SK-------  276 (390)
T ss_dssp             -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-----HH-------
T ss_pred             ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH-----HH-------
Confidence            2223345679999999999865           468999999999999999999999996543211     11       


Q ss_pred             cccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          738 RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       738 ~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                        +..++++.....++...+..+.+|+.+||+.||.+|||+.|+++|
T Consensus       277 --~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          277 --LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             --HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             --HHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence              112233333333344445678999999999999999999999999

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=8.4e-40  Score=367.63  Aligned_cols=256  Identities=23%  Similarity=0.361  Sum_probs=205.0

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .++|+..++||+|+||.||+++.. +++.+|+|++...   .......+..|..++.++ +||||+++++++..++.+++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            467999999999999999999975 4678899987643   233345688899999887 89999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+++|+|..++...  ..+++.++..++.|++.||.|||+   .+|+||||||+||||+.++.+||+|||+++....
T Consensus       131 V~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~  205 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  205 (396)
T ss_dssp             EEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence            99999999999998653  358999999999999999999995   8999999999999999999999999999985322


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcch--hcHHHHHHHHhhhccccccc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ--INLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~--~~l~~~~~~~~~~~~~~~i~  744 (851)
                      .  .......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.  ....+........       
T Consensus       206 ~--~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~-------  276 (396)
T 4dc2_A          206 P--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE-------  276 (396)
T ss_dssp             T--TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH-------
T ss_pred             C--CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc-------
Confidence            1  2234567899999999999999999999999999999999999999964322111  1111111111111       


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCH------HHHHHH
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTM------GEVLWH  784 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~------~evl~~  784 (851)
                       ..  ..++...+..+.+|+.+||+.||.+||++      +|+++|
T Consensus       277 -~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H  319 (396)
T 4dc2_A          277 -KQ--IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  319 (396)
T ss_dssp             -CC--CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred             -cc--cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence             11  12344456678999999999999999984      799988

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=1.9e-40  Score=380.82  Aligned_cols=257  Identities=29%  Similarity=0.442  Sum_probs=207.1

Q ss_pred             HHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          510 VATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       510 ~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ...++|...++||+|+||.||+|..+++..||||++.... ...+.|.+|+++|++++||||+++++++.. +..++|||
T Consensus       181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e  258 (452)
T 1fmk_A          181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE  258 (452)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred             cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence            3457788899999999999999999888889999987654 235689999999999999999999999976 67899999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++|+|.++|.......+++.+++.++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++...... 
T Consensus       259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-  334 (452)
T 1fmk_A          259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-  334 (452)
T ss_dssp             CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred             hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCc-
Confidence            9999999999965444568999999999999999999995   899999999999999999999999999998643221 


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                      ........++..|+|||.+....++.++|||||||+||||++ |+.||......+   .   .... ..         ..
T Consensus       335 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~---~~~i-~~---------~~  398 (452)
T 1fmk_A          335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---V---LDQV-ER---------GY  398 (452)
T ss_dssp             --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---H---HHHH-HT---------TC
T ss_pred             eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH---H---HHHH-Hc---------CC
Confidence            112233457889999999999999999999999999999999 888886543221   1   1111 11         11


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      +...+..+++.+.+++.+||+.||.+|||++++++.|+.+
T Consensus       399 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~  438 (452)
T 1fmk_A          399 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  438 (452)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            2233456677899999999999999999999999998743

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=7.6e-40  Score=360.04  Aligned_cols=265  Identities=24%  Similarity=0.377  Sum_probs=213.7

Q ss_pred             HHHhcCCceeeeeeeecceEEEEEEEcC------cceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEcc
Q 047215          509 RVATNNFDESLMIGVGGFGKVFKGEIED------CTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDE  580 (851)
Q Consensus       509 ~~~t~~f~~~~~LG~G~fG~Vykg~~~~------~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~  580 (851)
                      +...++|...+.||+|+||.||+|....      ...+|+|.+... .....+.+.+|+.+++++ +||||++++++|..
T Consensus        42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  121 (333)
T 2i1m_A           42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH  121 (333)
T ss_dssp             BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence            3445789999999999999999998643      236899988765 344567799999999999 89999999999999


Q ss_pred             CCcEEEEEEecCCcchhhhccCCC------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc
Q 047215          581 QNEMILVYEYMANGTLRSHLFGSD------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD  648 (851)
Q Consensus       581 ~~~~~lV~Ey~~~gsL~~~L~~~~------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld  648 (851)
                      ++..++||||+++|+|.+++....            ...+++.+++.++.|++.||.|||+   .+|+||||||+|||++
T Consensus       122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~  198 (333)
T 2i1m_A          122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLT  198 (333)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEE
T ss_pred             CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEEC
Confidence            999999999999999999985421            3457899999999999999999996   8999999999999999


Q ss_pred             CCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcH
Q 047215          649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINL  727 (851)
Q Consensus       649 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l  727 (851)
                      .++.+||+|||+++...............+|+.|+|||.+.+..++.++|||||||++|||++ |+.||........  .
T Consensus       199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~--~  276 (333)
T 2i1m_A          199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK--F  276 (333)
T ss_dssp             GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH--H
T ss_pred             CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH--H
Confidence            999999999999975433222222334567889999999999999999999999999999999 8888875433221  1


Q ss_pred             HHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          728 ADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       728 ~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      .    .....         ......+..++..+.+++.+||+.||.+|||+.|++++|+.+.+.
T Consensus       277 ~----~~~~~---------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  327 (333)
T 2i1m_A          277 Y----KLVKD---------GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE  327 (333)
T ss_dssp             H----HHHHH---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             H----HHHhc---------CCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence            1    11111         111122334456789999999999999999999999999877654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=1.2e-39  Score=352.53  Aligned_cols=257  Identities=26%  Similarity=0.387  Sum_probs=203.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      .++|+..+.||+|+||.||+|+.. .+..+|+|++...   .....+.+.+|+.++++++||||+++++++..++..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            367899999999999999999864 5778999987433   344567899999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+++|+|.+++...  .++++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus        90 ~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  164 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET  164 (294)
T ss_dssp             EECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred             EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence            9999999999998543  368999999999999999999995   89999999999999999999999999999864322


Q ss_pred             CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                      . ........||+.|+|||.+.+..++.++||||||+++|||++|+.||.......      ........ ..     +.
T Consensus       165 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~-~~-----~~  231 (294)
T 4eqm_A          165 S-LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS------IAIKHIQD-SV-----PN  231 (294)
T ss_dssp             -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH------HHHHHHSS-CC-----CC
T ss_pred             c-ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHhhc-cC-----CC
Confidence            1 122334569999999999999999999999999999999999999997543211      11111111 00     11


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRP-TMGEVLWHLE  786 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~evl~~L~  786 (851)
                      .........++.+.+++.+||+.||.+|| +++++.+.|+
T Consensus       232 ~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~  271 (294)
T 4eqm_A          232 VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLS  271 (294)
T ss_dssp             HHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred             cchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence            11122344567799999999999999999 7888877765

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=1.4e-39  Score=351.25  Aligned_cols=268  Identities=21%  Similarity=0.310  Sum_probs=206.2

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ++|+..++||+|+||+||+|+.. +++.+|+|++...  .......+.+|+.++++++||||+++++++..++..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            57889999999999999999875 5788999987644  33445778899999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++ +|.+.+... ...+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.....  
T Consensus        82 ~~~~-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~--  154 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP--  154 (292)
T ss_dssp             CCSE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC--
T ss_pred             cCCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCc--
Confidence            9986 454444332 2468999999999999999999996   89999999999999999999999999999764321  


Q ss_pred             cccccccccCCcccCcccccccC-CCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcc------ccc
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS------LKS  742 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~-~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~------~~~  742 (851)
                      ........||+.|+|||++.+.. ++.++|||||||++|||++|+.|+........  .............      ...
T Consensus       155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~  232 (292)
T 3o0g_A          155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD--QLKRIFRLLGTPTEEQWPSMTK  232 (292)
T ss_dssp             CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH--HHHHHHHHHCCCCTTTCTTGGG
T ss_pred             cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH--HHHHHHHHhCCCChhhhhhhcc
Confidence            12234457899999999997765 89999999999999999999988654432211  1111111110000      000


Q ss_pred             ccC---------ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          743 IID---------PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       743 i~d---------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      ..+         ........+..+..+.+|+.+||+.||++|||++|+++|         +|++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h---------p~f~~  288 (292)
T 3o0g_A          233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH---------PYFSD  288 (292)
T ss_dssp             STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS---------GGGTT
T ss_pred             cccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC---------ccccc
Confidence            000         000112223456778999999999999999999999999         99864

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.7e-39  Score=361.94  Aligned_cols=253  Identities=21%  Similarity=0.295  Sum_probs=206.9

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      .++|+..+.||+|+||.||+|... ++..+|+|++...  .....+.+.+|+.++++++||||+++++++..++..++||
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            467999999999999999999875 5788999988654  3455678999999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCC---CeEEEeeccccccCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN---FVAKMSDFGLSKTGP  665 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~---~~~kl~DFGla~~~~  665 (851)
                      ||+++|+|.+.+...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.+   +.+||+|||+++...
T Consensus       108 e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~  182 (362)
T 2bdw_A          108 DLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  182 (362)
T ss_dssp             CCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred             ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence            999999999998543  468999999999999999999995   899999999999999754   469999999998643


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ..   .......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+   ..... .+..     
T Consensus       183 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~---~~---~~~i~-~~~~-----  247 (362)
T 2bdw_A          183 DS---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RL---YAQIK-AGAY-----  247 (362)
T ss_dssp             TC---CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH---HHHHH-HTCC-----
T ss_pred             CC---cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HH---HHHHH-hCCC-----
Confidence            22   1233467999999999999999999999999999999999999998754321   11   11111 1110     


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                       .........++..+.+|+.+||+.||.+|||+.|+++|.
T Consensus       248 -~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp  286 (362)
T 2bdw_A          248 -DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP  286 (362)
T ss_dssp             -CCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSH
T ss_pred             -CCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence             001111134556789999999999999999999999993

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=1.4e-39  Score=346.11  Aligned_cols=250  Identities=19%  Similarity=0.305  Sum_probs=206.4

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC--CcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ--NEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--~~~~lV~  588 (851)
                      ++|...+.||+|+||.||+|+.+ +..+|+|++...  .....+.|.+|+.++++++||||+++++++...  +..++||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            57888999999999999999976 677899988754  345567899999999999999999999999876  7889999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCC--eEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG--IIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~--iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||+++|+|.+++.......+++.++..++.|++.||.|||+   .+  ++||||||+|||++.++.++|+|||++.....
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~  165 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS  165 (271)
T ss_dssp             ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred             cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence            99999999999987665679999999999999999999995   77  99999999999999999999999988654211


Q ss_pred             CCccccccccccCCcccCcccccccCC---CchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQL---TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~---t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                             ....||+.|+|||.+.+..+   +.++||||||+++|||++|+.||.......      .....         
T Consensus       166 -------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~---------  223 (271)
T 3kmu_A          166 -------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME------IGMKV---------  223 (271)
T ss_dssp             -------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH------HHHHH---------
T ss_pred             -------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH------HHHHH---------
Confidence                   23468999999999986544   448999999999999999999986543211      11111         


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      .........+..++..+.+++.+||+.||.+|||++|+++.|+.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l  268 (271)
T 3kmu_A          224 ALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM  268 (271)
T ss_dssp             HHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence            111122233445667799999999999999999999999998866

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=6.4e-40  Score=356.69  Aligned_cols=270  Identities=24%  Similarity=0.329  Sum_probs=204.9

Q ss_pred             HhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCC-----hhhHHHHHHHHHHHHhcC---CcceeeEEEEEccC
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQS-----EQGLAEFETEIEMLSKLR---HRHLVSLIGFCDEQ  581 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~~~~  581 (851)
                      ..++|+..++||+|+||.||+|+. .+++.+|+|++....     ......+.+|+.++++++   ||||++++++|...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            357899999999999999999996 567889999875321     122345677888877765   99999999999765


Q ss_pred             C-----cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEe
Q 047215          582 N-----EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMS  656 (851)
Q Consensus       582 ~-----~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~  656 (851)
                      .     ..++||||++ |+|.+++.......+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~  162 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLA  162 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCEEEC
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEEe
Confidence            4     5899999997 599999977766669999999999999999999996   899999999999999999999999


Q ss_pred             eccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh
Q 047215          657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK  736 (851)
Q Consensus       657 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~  736 (851)
                      |||+++.....   .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+..   ........
T Consensus       163 Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~---~~i~~~~~  236 (308)
T 3g33_A          163 DFGLARIYSYQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL---GKIFDLIG  236 (308)
T ss_dssp             SCSCTTTSTTC---CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHH---HHHHHHHC
T ss_pred             eCccccccCCC---cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhC
Confidence            99999764322   2234567899999999999999999999999999999999999999765432221   11111110


Q ss_pred             hcccccc------cCccCCC-------CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          737 QRSLKSI------IDPHLKG-------NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       737 ~~~~~~i------~d~~l~~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      ......+      ....+..       ...++.++.+.+|+.+||+.||.+|||+.|+++|         +|++..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h---------~~~~~~  303 (308)
T 3g33_A          237 LPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH---------SYLHKD  303 (308)
T ss_dssp             CCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS---------TTC---
T ss_pred             CCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC---------ccccCC
Confidence            0000000      0000000       0112455778999999999999999999999999         998753

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=8.9e-40  Score=364.13  Aligned_cols=256  Identities=21%  Similarity=0.257  Sum_probs=196.8

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      .++|...+.||+|+||.||+++.. .++.+|+|++..... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            468999999999999999999975 678899998865432 236688999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe--EEEeeccccccCCCCC
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV--AKMSDFGLSKTGPSME  668 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~--~kl~DFGla~~~~~~~  668 (851)
                      +++|+|.+++...  ..+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.  +||+|||+++....  
T Consensus        98 ~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~--  170 (361)
T 3uc3_A           98 ASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL--  170 (361)
T ss_dssp             CCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred             CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccc--
Confidence            9999999998543  358999999999999999999995   89999999999999987665  99999999874222  


Q ss_pred             ccccccccccCCcccCcccccccCCCch-HHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEK-SDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~k-sDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                       ........||+.|+|||++.+..++.+ +|||||||++|||++|+.||........  ........         ....
T Consensus       171 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~~~~~~---------~~~~  238 (361)
T 3uc3_A          171 -HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD--YRKTIQRI---------LSVK  238 (361)
T ss_dssp             -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC--HHHHHHHH---------HTTC
T ss_pred             -cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH--HHHHHHHH---------hcCC
Confidence             112234569999999999988887766 8999999999999999999976433221  11111111         1111


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      .........+..+.+|+.+||+.||.+|||+.|+++|.+.
T Consensus       239 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f  278 (361)
T 3uc3_A          239 YSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWF  278 (361)
T ss_dssp             CCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHH
T ss_pred             CCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcch
Confidence            1111112345678999999999999999999999999443

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=6.8e-40  Score=361.02  Aligned_cols=246  Identities=24%  Similarity=0.306  Sum_probs=204.1

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|.+.+.||+|+||.||+|+. ..++.+|+|++....   ......+.+|+.++++++||||+++++++..++..++||
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            6789999999999999999996 567889999876431   222457889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+ +|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... 
T Consensus        89 E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~-  161 (336)
T 3h4j_B           89 EYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG-  161 (336)
T ss_dssp             CCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS-
T ss_pred             ECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCC-
Confidence            999 68998888543  358999999999999999999995   89999999999999999999999999999864322 


Q ss_pred             ccccccccccCCcccCcccccccCC-CchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                        ......+||+.|+|||.+.+..+ +.++|||||||++|||++|+.||........               ...+... 
T Consensus       162 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~---------------~~~i~~~-  223 (336)
T 3h4j_B          162 --NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL---------------FKKVNSC-  223 (336)
T ss_dssp             --BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC---------------BCCCCSS-
T ss_pred             --cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH---------------HHHHHcC-
Confidence              22345679999999999988776 7899999999999999999999975432211               1111111 


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       ....+...+..+.+|+.+||+.||.+|||++|+++|
T Consensus       224 -~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          224 -VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             -CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             -CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence             112344556778999999999999999999999999

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=1.8e-39  Score=356.60  Aligned_cols=254  Identities=25%  Similarity=0.355  Sum_probs=200.9

Q ss_pred             hcCCceeeeeeeecceEEEEEEE----cCcceeEEeecCCCC----hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCc
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI----EDCTLAAIKRANPQS----EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE  583 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~----~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~  583 (851)
                      .++|+..+.||+|+||.||+++.    ..++.+|+|++....    ......+.+|+.+|++++||||+++++++..++.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            36799999999999999999987    467889999987542    2344568899999999999999999999999999


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .++||||+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~  170 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKE  170 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred             EEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence            99999999999999998543  358899999999999999999995   8999999999999999999999999999875


Q ss_pred             CCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      ....  ........||+.|+|||++.+..++.++|||||||++|||++|+.||.......   .   ......       
T Consensus       171 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~---~~~i~~-------  235 (327)
T 3a62_A          171 SIHD--GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK---T---IDKILK-------  235 (327)
T ss_dssp             ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---H---HHHHHH-------
T ss_pred             cccC--CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH---H---HHHHHh-------
Confidence            3221  122345679999999999999999999999999999999999999997543211   1   111111       


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHHHhhhhhccc
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~L~~~~~~~~~w~~~  798 (851)
                        ..  ..+++..+..+.+++.+||+.||.+||     +++|+++|         +|++.
T Consensus       236 --~~--~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h---------p~f~~  282 (327)
T 3a62_A          236 --CK--LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH---------PFFRH  282 (327)
T ss_dssp             --TC--CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS---------GGGSS
T ss_pred             --CC--CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC---------CcccC
Confidence              01  123344556789999999999999999     88999999         77754

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=1.3e-39  Score=362.22  Aligned_cols=274  Identities=22%  Similarity=0.284  Sum_probs=213.0

Q ss_pred             cccCHHHHHHHhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcC-----CcceeeE
Q 047215          501 KRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-----HRHLVSL  574 (851)
Q Consensus       501 ~~~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-----HpnIv~l  574 (851)
                      ..+++.+.....++|...++||+|+||.||+|+. .+++.+|||++... ......+..|+.+++++.     ||||+++
T Consensus        23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~  101 (360)
T 3llt_A           23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY  101 (360)
T ss_dssp             GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred             eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence            3455566666778999999999999999999987 46788999998743 344567788999999996     9999999


Q ss_pred             EEEEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-----
Q 047215          575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-----  649 (851)
Q Consensus       575 ~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-----  649 (851)
                      ++++...+..++||||+ +++|.+++.......+++.++..++.|++.||+|||+   .+|+||||||+|||++.     
T Consensus       102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~  177 (360)
T 3llt_A          102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEK  177 (360)
T ss_dssp             EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCE
T ss_pred             cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccc
Confidence            99999999999999999 8999999977666679999999999999999999995   89999999999999975     


Q ss_pred             --------------------CCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHH
Q 047215          650 --------------------NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV  709 (851)
Q Consensus       650 --------------------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eL  709 (851)
                                          ++.+||+|||+++.....     .....||+.|+|||++.+..++.++|||||||++|||
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  252 (360)
T 3llt_A          178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL  252 (360)
T ss_dssp             EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred             cccchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHH
Confidence                                789999999999863321     2345789999999999999999999999999999999


Q ss_pred             HhCCcCCCCCCCcchhcHHHHH---------HHHhhhcccccccCccCCCCCC--------------------hhHHHHH
Q 047215          710 VCARAVINPTLPKDQINLADWA---------MKWQKQRSLKSIIDPHLKGNYS--------------------PESLEKF  760 (851)
Q Consensus       710 ltG~~p~~~~~~~~~~~l~~~~---------~~~~~~~~~~~i~d~~l~~~~~--------------------~~~~~~l  760 (851)
                      ++|+.||......+........         ................+....+                    ....+.+
T Consensus       253 l~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l  332 (360)
T 3llt_A          253 YTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELF  332 (360)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHH
T ss_pred             HHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHH
Confidence            9999999765432221111110         0000000000000000000000                    1112568


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHH
Q 047215          761 GEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       761 ~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .+|+.+||+.||.+|||++|+|+|
T Consensus       333 ~~li~~~L~~dP~~Rpta~elL~h  356 (360)
T 3llt_A          333 CDFLYSILQIDPTLRPSPAELLKH  356 (360)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHHhcCChhhCCCHHHHhcC
Confidence            899999999999999999999999

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.7e-39  Score=360.14  Aligned_cols=259  Identities=22%  Similarity=0.310  Sum_probs=196.8

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ..++|+..+.||+|+||.||+|+.. .++.+|||++....  ..+.+.+|++++++++||||+++++++..++..++|||
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            4578999999999999999999976 46789999987543  34568899999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC---CCeEEEeeccccccCCC
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE---NFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~---~~~~kl~DFGla~~~~~  666 (851)
                      |+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.   ++.+||+|||+++....
T Consensus       129 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~  203 (349)
T 2w4o_A          129 LVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH  203 (349)
T ss_dssp             CCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred             eCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence            99999999998553  458999999999999999999995   89999999999999975   88999999999986432


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                         ........||+.|+|||++.+..++.++|||||||++|||++|+.||........  +   ...... ..      .
T Consensus       204 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~---~~~i~~-~~------~  268 (349)
T 2w4o_A          204 ---QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF--M---FRRILN-CE------Y  268 (349)
T ss_dssp             ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH--H---HHHHHT-TC------C
T ss_pred             ---ccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH--H---HHHHHh-CC------C
Confidence               1223446799999999999999999999999999999999999999875433211  1   111111 00      0


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCC
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDD  800 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~  800 (851)
                      ..........+..+.+|+.+||+.||++|||+.|+++|         +|+....
T Consensus       269 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h---------p~~~~~~  313 (349)
T 2w4o_A          269 YFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH---------PWVTGKA  313 (349)
T ss_dssp             CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS---------TTTTSTT
T ss_pred             ccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC---------cccCCCc
Confidence            11111223456679999999999999999999999999         9987543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-39  Score=355.79  Aligned_cols=245  Identities=24%  Similarity=0.361  Sum_probs=205.9

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+++.. +++.+|+|++...   .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            67899999999999999999875 6788999988643   1234567889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++....  
T Consensus        86 e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~--  158 (318)
T 1fot_A           86 DYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD--  158 (318)
T ss_dssp             CCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred             eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence            999999999999653  358899999999999999999994   8999999999999999999999999999986432  


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                         .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.......      .....         ....+
T Consensus       159 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~i---------~~~~~  220 (318)
T 1fot_A          159 ---VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK------TYEKI---------LNAEL  220 (318)
T ss_dssp             ---CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHH---------HHCCC
T ss_pred             ---ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH------HHHHH---------HhCCC
Confidence               1234679999999999999999999999999999999999999997543211      11111         11111


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                        .++...+..+.+++.+||+.||.+||     +++|+++|
T Consensus       221 --~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          221 --RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             --CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             --CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence              23344556789999999999999999     89999999

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=1.1e-39  Score=349.36  Aligned_cols=258  Identities=26%  Similarity=0.395  Sum_probs=210.9

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ..++|+..+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|++++++++||||+++++++.. +..++||||
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~   88 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY   88 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence            456888999999999999999998888889999887543 335788999999999999999999999874 568999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++.......+++.++..++.|++.||+|||+   .+++||||||+|||++.++.+||+|||+++...... .
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~  164 (279)
T 1qpc_A           89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-Y  164 (279)
T ss_dssp             CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-E
T ss_pred             CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc-c
Confidence            999999999965433468999999999999999999995   899999999999999999999999999998643322 1


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                      .......++..|+|||.+.+..++.++||||||++++||++ |+.||......+   .   ...... +         ..
T Consensus       165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~---~~~~~~-~---------~~  228 (279)
T 1qpc_A          165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---V---IQNLER-G---------YR  228 (279)
T ss_dssp             ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---H---HHHHHT-T---------CC
T ss_pred             ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH---H---HHHHhc-c---------cC
Confidence            22234457889999999998899999999999999999999 888886543211   1   111111 1         11


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ...+..++..+.+++.+||+.||++|||+.++++.|+.+..
T Consensus       229 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  269 (279)
T 1qpc_A          229 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (279)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence            12234456679999999999999999999999999987764

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=8.7e-40  Score=357.49  Aligned_cols=272  Identities=20%  Similarity=0.311  Sum_probs=196.0

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .++|+..+.||+|+||.||+|... +++.+|+|++.... ......+.+|++++++++||||+++++++..++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            467888999999999999999864 57889999886543 3344678899999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCC----CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          590 YMANGTLRSHLFGS----DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       590 y~~~gsL~~~L~~~----~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      |++ |+|.+++...    ....+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            998 5998887432    22458899999999999999999995   899999999999999999999999999997643


Q ss_pred             CCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhc---ccc
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR---SLK  741 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~---~~~  741 (851)
                      ...  .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+..   ..........   ...
T Consensus       160 ~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~  234 (317)
T 2pmi_A          160 IPV--NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQL---KLIFDIMGTPNESLWP  234 (317)
T ss_dssp             SCC--CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCSCCTTTCG
T ss_pred             CCc--ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHhCCCChhHhh
Confidence            211  12234568999999999976 46899999999999999999999999765432221   1111110000   000


Q ss_pred             c---c--cCccC------------CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCCC
Q 047215          742 S---I--IDPHL------------KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDR  801 (851)
Q Consensus       742 ~---i--~d~~l------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~~  801 (851)
                      .   .  ..+.+            ........+..+.+|+.+||+.||.+|||++|+++|         +|+.....
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h---------p~f~~~~~  302 (317)
T 2pmi_A          235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH---------PWFAEYYH  302 (317)
T ss_dssp             GGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS---------GGGGGGCC
T ss_pred             hhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC---------hhhhcccc
Confidence            0   0  00000            000112345678999999999999999999999999         88875443

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=2.4e-39  Score=369.73  Aligned_cols=253  Identities=19%  Similarity=0.258  Sum_probs=205.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      .++|+..+.||+|+||.||++.. .+++.+|+|++....  ....+.+.+|+.++++++||||+++++++..++..++||
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            46799999999999999999986 467889999876543  344567899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc---CCCeEEEeeccccccCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld---~~~~~kl~DFGla~~~~  665 (851)
                      ||+++|+|.+.+...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++   .++.+||+|||+++...
T Consensus        90 E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~  164 (444)
T 3soa_A           90 DLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE  164 (444)
T ss_dssp             CCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred             EeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence            999999999988654  468999999999999999999995   8999999999999998   56889999999997644


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ...  .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+   +   ..... .+..     
T Consensus       165 ~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~---~---~~~i~-~~~~-----  230 (444)
T 3soa_A          165 GEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR---L---YQQIK-AGAY-----  230 (444)
T ss_dssp             TTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---H---HHHHH-HTCC-----
T ss_pred             CCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH---H---HHHHH-hCCC-----
Confidence            322  22345679999999999999999999999999999999999999986543211   1   11111 1110     


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       ..........++.+.+|+.+||+.||.+|||+.|+|+|
T Consensus       231 -~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          231 -DFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             -CCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             -CCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence             01111123455679999999999999999999999999

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=5.4e-39  Score=353.11  Aligned_cols=264  Identities=16%  Similarity=0.153  Sum_probs=210.8

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .++|+..+.||+|+||.||+|+. .+++.+|||.+.....  ...+.+|+++++++ +||||+++++++..++..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            36789999999999999999986 5678899998765432  24588999999999 99999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe-----EEEeeccccccC
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV-----AKMSDFGLSKTG  664 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~-----~kl~DFGla~~~  664 (851)
                      |+ +++|.+++... ...+++.+++.++.|++.||+|||+   .+|+||||||+|||++.++.     +||+|||+++..
T Consensus        86 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~  160 (330)
T 2izr_A           86 LL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY  160 (330)
T ss_dssp             CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred             eC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence            99 99999998654 3468999999999999999999995   89999999999999998887     999999999864


Q ss_pred             CCCCccc-----cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcc
Q 047215          665 PSMEHTH-----VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS  739 (851)
Q Consensus       665 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  739 (851)
                      .......     ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......................
T Consensus       161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~  240 (330)
T 2izr_A          161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATP  240 (330)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSC
T ss_pred             ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCC
Confidence            3222111     12456799999999999999999999999999999999999999987544332222221111111100


Q ss_pred             cccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhh
Q 047215          740 LKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH  792 (851)
Q Consensus       740 ~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  792 (851)
                      .     ..+    ...++ .+.+++..||+.||.+||+++++++.|+.+.+..
T Consensus       241 ~-----~~~----~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~  283 (330)
T 2izr_A          241 I-----EVL----CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK  283 (330)
T ss_dssp             H-----HHH----TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             H-----HHH----hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence            0     000    11233 7999999999999999999999999999777543

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.6e-39  Score=352.14  Aligned_cols=270  Identities=23%  Similarity=0.289  Sum_probs=205.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ++|+..+.||+|+||.||+|+.. +++.+|+|++....  ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            57899999999999999999975 47889999876543  3345678899999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++++|.+++...  ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....  
T Consensus        83 ~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--  155 (311)
T 4agu_A           83 YCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP--  155 (311)
T ss_dssp             CCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred             eCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc--
Confidence            99999999988543  458999999999999999999995   89999999999999999999999999999764322  


Q ss_pred             cccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHH---------HHHhhhcc
Q 047215          670 THVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA---------MKWQKQRS  739 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~---------~~~~~~~~  739 (851)
                      ........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||......+........         ..+.....
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (311)
T 4agu_A          156 SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY  235 (311)
T ss_dssp             ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred             ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence            122334578999999999976 67899999999999999999999999765443322111110         00000000


Q ss_pred             cc--cccCccCCCC---CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          740 LK--SIIDPHLKGN---YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       740 ~~--~i~d~~l~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      ..  .+.++.....   ..+..+..+.+|+.+||+.||.+|||++|+++|         +|++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h---------p~f~~  290 (311)
T 4agu_A          236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH---------PYFEN  290 (311)
T ss_dssp             GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS---------GGGTT
T ss_pred             cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC---------hHHHh
Confidence            00  0111110000   002345678999999999999999999999999         99864

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=3.9e-40  Score=361.69  Aligned_cols=278  Identities=22%  Similarity=0.324  Sum_probs=214.0

Q ss_pred             cCCceeeeeeeecceEEEEEEE-----cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEc--cCCcEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-----EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD--EQNEMI  585 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-----~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~--~~~~~~  585 (851)
                      ++|+..+.||+|+||.||+|++     ..+..+|||++........+.+.+|++++++++||||+++++++.  ..+..+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            6788999999999999999984     356789999998887777788999999999999999999999885  556789


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      +||||+++++|.+++.... ..+++.+++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       103 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~  178 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLP  178 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred             EEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence            9999999999999986532 358999999999999999999995   899999999999999999999999999998654


Q ss_pred             CCCc-cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          666 SMEH-THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       666 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      .... ........||..|+|||++.+..++.++||||||+++|||++|+.|+......... ...+.............+
T Consensus       179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  257 (327)
T 3lxl_A          179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLR-MMGCERDVPALSRLLELL  257 (327)
T ss_dssp             TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH-HCC----CCHHHHHHHHH
T ss_pred             cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhh-hcccccccccHHHHHHHh
Confidence            3222 12233456888899999999999999999999999999999999887542211000 000000000000011111


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhh
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAW  795 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w  795 (851)
                      ........+..+++.+.+++.+||+.||.+|||++|++++|+.+......|
T Consensus       258 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~  308 (327)
T 3lxl_A          258 EEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC  308 (327)
T ss_dssp             HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred             hcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence            222233345566778999999999999999999999999998775544443

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=4.4e-40  Score=360.02  Aligned_cols=267  Identities=25%  Similarity=0.360  Sum_probs=214.4

Q ss_pred             cCHHHHHHHhcCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEE
Q 047215          503 FTLAEIRVATNNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLI  575 (851)
Q Consensus       503 ~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~  575 (851)
                      +...+++...++|...+.||+|+||.||+|+..      .+..+|+|.+... .......+.+|+.++++++||||++++
T Consensus        15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   94 (322)
T 1p4o_A           15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL   94 (322)
T ss_dssp             CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred             cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence            334455566788999999999999999999864      3578999998755 334556799999999999999999999


Q ss_pred             EEEccCCcEEEEEEecCCcchhhhccCC--------CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE
Q 047215          576 GFCDEQNEMILVYEYMANGTLRSHLFGS--------DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL  647 (851)
Q Consensus       576 g~~~~~~~~~lV~Ey~~~gsL~~~L~~~--------~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl  647 (851)
                      +++..++..++||||+++|+|.+++...        ....+++.++++++.|++.||.|||+   ++|+||||||+|||+
T Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli  171 (322)
T 1p4o_A           95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMV  171 (322)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEE
T ss_pred             EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEE
Confidence            9999999999999999999999998542        12457899999999999999999995   899999999999999


Q ss_pred             cCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhc
Q 047215          648 DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQIN  726 (851)
Q Consensus       648 d~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~  726 (851)
                      +.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.|+......    
T Consensus       172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----  247 (322)
T 1p4o_A          172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE----  247 (322)
T ss_dssp             CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH----
T ss_pred             cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH----
Confidence            9999999999999875432222222334457889999999999999999999999999999999 77777653221    


Q ss_pred             HHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          727 LADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       727 l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                        +...... .+..         ...+..++..+.+++.+||+.||.+|||+.|++++|+.+
T Consensus       248 --~~~~~~~-~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~  297 (322)
T 1p4o_A          248 --QVLRFVM-EGGL---------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  297 (322)
T ss_dssp             --HHHHHHH-TTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             --HHHHHHH-cCCc---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence              1111111 1110         122345567799999999999999999999999998754

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=2.5e-39  Score=358.14  Aligned_cols=255  Identities=24%  Similarity=0.372  Sum_probs=206.0

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      ++|+..+.||+|+||.||+++.. +++.+|+|++...   .....+.+.+|+.+++++ +||||+++++++...+..++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            57889999999999999999975 5778999988653   344566788999999988 899999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+++|+|.+++...  ..+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus        89 ~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~  163 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP  163 (345)
T ss_dssp             ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred             EeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence            9999999999998643  358999999999999999999995   89999999999999999999999999999853221


Q ss_pred             CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchh--cHHHHHHHHhhhcccccccC
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI--NLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~--~l~~~~~~~~~~~~~~~i~d  745 (851)
                        .......+||+.|+|||++.+..++.++|||||||++|||++|+.||.........  ..........        ..
T Consensus       164 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i--------~~  233 (345)
T 3a8x_A          164 --GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI--------LE  233 (345)
T ss_dssp             --TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHH--------HH
T ss_pred             --CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHH--------Hc
Confidence              12234568999999999999999999999999999999999999999653221110  0011111111        11


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCH------HHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTM------GEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~------~evl~~  784 (851)
                      ..  ..++...+..+.+++.+||+.||.+||++      +|+++|
T Consensus       234 ~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h  276 (345)
T 3a8x_A          234 KQ--IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  276 (345)
T ss_dssp             CC--CCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred             CC--CCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence            11  12334556678999999999999999995      789888

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=3.5e-39  Score=354.31  Aligned_cols=269  Identities=20%  Similarity=0.256  Sum_probs=213.4

Q ss_pred             HHHHHHHhcCCcee-eeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEc
Q 047215          505 LAEIRVATNNFDES-LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCD  579 (851)
Q Consensus       505 ~~~l~~~t~~f~~~-~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~  579 (851)
                      +...+...+.|... ++||+|+||.||+|+.. +++.+|+|++...  .......+.+|+.+++++ +||||+++++++.
T Consensus        20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~   99 (327)
T 3lm5_A           20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE   99 (327)
T ss_dssp             SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred             HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence            33444455677776 88999999999999875 5788999987653  334467889999999999 5699999999999


Q ss_pred             cCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC---CCeEEEe
Q 047215          580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE---NFVAKMS  656 (851)
Q Consensus       580 ~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~---~~~~kl~  656 (851)
                      .++..++||||+++|+|.+++.......+++.++..++.|++.||+|||+   .+|+||||||+|||++.   ++.+||+
T Consensus       100 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL~  176 (327)
T 3lm5_A          100 NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIV  176 (327)
T ss_dssp             CSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEEC
T ss_pred             eCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEEe
Confidence            99999999999999999999977666779999999999999999999995   89999999999999987   7899999


Q ss_pred             eccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh
Q 047215          657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK  736 (851)
Q Consensus       657 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~  736 (851)
                      |||+++.....   .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.      ......
T Consensus       177 Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~------~~~i~~  247 (327)
T 3lm5_A          177 DFGMSRKIGHA---CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET------YLNISQ  247 (327)
T ss_dssp             CGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHH
T ss_pred             eCccccccCCc---cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH------HHHHHh
Confidence            99999864322   122345799999999999999999999999999999999999999865432211      111110


Q ss_pred             hcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCCC
Q 047215          737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDR  801 (851)
Q Consensus       737 ~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~~  801 (851)
                      .       ...........++..+.+++.+||+.||.+|||++|+++|         +|++..+.
T Consensus       248 ~-------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h---------~~~~~~~~  296 (327)
T 3lm5_A          248 V-------NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH---------SWLQQWDF  296 (327)
T ss_dssp             T-------CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC---------GGGCCCCT
T ss_pred             c-------ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC---------Hhhccccc
Confidence            0       0111122234456779999999999999999999999999         88875443

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2.2e-39  Score=344.29  Aligned_cols=257  Identities=28%  Similarity=0.398  Sum_probs=211.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .++|...+.||+|+||.||+|...++..+|+|++..... ..+.+.+|++++++++||||+++++++..++..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM   85 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence            367888999999999999999998888899999876543 3467899999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++++|.+++.... ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++..... ...
T Consensus        86 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~-~~~  160 (267)
T 3t9t_A           86 EHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYT  160 (267)
T ss_dssp             TTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH-HHH
T ss_pred             CCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccc-ccc
Confidence            9999999986543 468899999999999999999995   89999999999999999999999999999764321 111


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+      ....... +         ...
T Consensus       161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~i~~-~---------~~~  224 (267)
T 3t9t_A          161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDIST-G---------FRL  224 (267)
T ss_dssp             STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHT-T---------CCC
T ss_pred             ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH------HHHHHhc-C---------CcC
Confidence            2233457788999999999999999999999999999999 888876543211      1111111 0         011


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ..+...+..+.+++.+||+.||.+|||+++++++|+.+.+
T Consensus       225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          225 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            1223445678999999999999999999999999988764

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=2.8e-39  Score=362.04  Aligned_cols=250  Identities=24%  Similarity=0.343  Sum_probs=206.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+++.. .++.+|+|++...   .......+.+|+.+|++++||||+++++++...+..++||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            67899999999999999999875 4678999987643   2334567889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... 
T Consensus        95 e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-  168 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-  168 (384)
T ss_dssp             CCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred             ecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCC-
Confidence            999999999999653  468999999999999999999995   89999999999999999999999999999864322 


Q ss_pred             ccccccccccCCcccCcccccc---cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWR---QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~---~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                        ......+||+.|+|||++..   ..++.++|||||||++|||++|+.||..........+..   ....         
T Consensus       169 --~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~---~~~~---------  234 (384)
T 4fr4_A          169 --TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVH---TFET---------  234 (384)
T ss_dssp             --CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHH---HHHH---------
T ss_pred             --CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHH---HHhh---------
Confidence              22345679999999999974   458999999999999999999999997544332221111   1110         


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCC-HHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT-MGEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~evl~~  784 (851)
                        ....++...+..+.+|+.+||+.||.+||+ ++++++|
T Consensus       235 --~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h  272 (384)
T 4fr4_A          235 --TVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF  272 (384)
T ss_dssp             --CCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred             --cccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence              011234455677999999999999999998 8888888

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=1.5e-39  Score=363.75  Aligned_cols=248  Identities=24%  Similarity=0.291  Sum_probs=199.1

Q ss_pred             eeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCCcc
Q 047215          517 ESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGT  595 (851)
Q Consensus       517 ~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~gs  595 (851)
                      ..++||+|+||.||+|+. .++..+|+|++........+.+.+|+++|++++||||+++++++..++..++||||+++|+
T Consensus        93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~  172 (373)
T 2x4f_A           93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE  172 (373)
T ss_dssp             EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred             cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence            356899999999999986 4578899999987776777889999999999999999999999999999999999999999


Q ss_pred             hhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE--cCCCeEEEeeccccccCCCCCccccc
Q 047215          596 LRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL--DENFVAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       596 L~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl--d~~~~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      |.+++.... ..+++.++..++.|++.||.|||+   .+|+||||||+|||+  +.++.+||+|||+++......   ..
T Consensus       173 L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---~~  245 (373)
T 2x4f_A          173 LFDRIIDES-YNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KL  245 (373)
T ss_dssp             EHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---BC
T ss_pred             HHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---cc
Confidence            999885432 358899999999999999999995   899999999999999  677899999999998643322   22


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYS  753 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  753 (851)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.      ........  ..     +.....
T Consensus       246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------~~~i~~~~--~~-----~~~~~~  312 (373)
T 2x4f_A          246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET------LNNILACR--WD-----LEDEEF  312 (373)
T ss_dssp             CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHHTC--CC-----SCSGGG
T ss_pred             ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhcc--CC-----CChhhh
Confidence            345699999999999999999999999999999999999999875432211      11111110  00     001111


Q ss_pred             hhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          754 PESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       754 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ...++.+.+|+.+||+.||.+|||++|+++|
T Consensus       313 ~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h  343 (373)
T 2x4f_A          313 QDISEEAKEFISKLLIKEKSWRISASEALKH  343 (373)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            2345678999999999999999999999999

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=3.8e-39  Score=344.25  Aligned_cols=259  Identities=24%  Similarity=0.323  Sum_probs=210.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++|+..+.||+|+||.||+|+.. +++.+|+|++... .....+.+.+|+.++++++||||+++++++..++..++||||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            57889999999999999999875 6788999987643 334457889999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++...  ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++.........
T Consensus        87 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~  161 (276)
T 2yex_A           87 CSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  161 (276)
T ss_dssp             CTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             cCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence            9999999998543  468999999999999999999995   89999999999999999999999999998754322222


Q ss_pred             ccccccccCCcccCcccccccCC-CchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~-t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                      .......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||........ ....|    ....         ..
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~----~~~~---------~~  227 (276)
T 2yex_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDW----KEKK---------TY  227 (276)
T ss_dssp             CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHHHH----HTTC---------TT
T ss_pred             hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHh----hhcc---------cc
Confidence            23345678999999999987665 7899999999999999999999976443221 11111    1110         00


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      .......+..+.+++.+||+.||.+|||++|+++|         +|++..
T Consensus       228 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~---------~~~~~~  268 (276)
T 2yex_A          228 LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD---------RWYNKP  268 (276)
T ss_dssp             STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC---------TTTTCC
T ss_pred             cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC---------ccccCh
Confidence            01123445678999999999999999999999999         888643

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=1.1e-38  Score=344.74  Aligned_cols=264  Identities=16%  Similarity=0.167  Sum_probs=211.8

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .++|+..+.||+|+||.||+|+. .+++.+|+|++....  ....+.+|+.+++++ +|+|++++++++..+...++|||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            46799999999999999999986 567889999876443  234578899999999 79999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe-----EEEeeccccccC
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV-----AKMSDFGLSKTG  664 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~-----~kl~DFGla~~~  664 (851)
                      |+ +++|.+++.... .++++.++..++.|++.||+|||+   .+|+||||||+|||++.++.     +||+|||+++..
T Consensus        87 ~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~  161 (298)
T 1csn_A           87 LL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY  161 (298)
T ss_dssp             CC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred             ec-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence            99 999999996543 358999999999999999999994   89999999999999987765     999999999864


Q ss_pred             CCCCcc-----ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcc
Q 047215          665 PSMEHT-----HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS  739 (851)
Q Consensus       665 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  739 (851)
                      ......     .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......................
T Consensus       162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  241 (298)
T 1csn_A          162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP  241 (298)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred             ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCcc
Confidence            332211     123456799999999999999999999999999999999999999987544333222222111111111


Q ss_pred             cccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          740 LKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       740 ~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      .     +.+    ...+++.+.+++.+||+.||.+|||++++++.|+.+.+.
T Consensus       242 ~-----~~~----~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~  284 (298)
T 1csn_A          242 L-----REL----CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER  284 (298)
T ss_dssp             H-----HHH----TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             H-----HHH----HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence            1     111    123456799999999999999999999999999988754

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.4e-39  Score=356.98  Aligned_cols=255  Identities=23%  Similarity=0.336  Sum_probs=199.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC--------
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN--------  582 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~--------  582 (851)
                      ++|+..+.||+|+||.||+|+.. +++.+|||++... .....+.+.+|+++|++++||||++++++|.+..        
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            57889999999999999999976 6789999998654 3445678999999999999999999999985443        


Q ss_pred             -------------------------------------------------cEEEEEEecCCcchhhhccCCC-CCCCchhh
Q 047215          583 -------------------------------------------------EMILVYEYMANGTLRSHLFGSD-LPPLTWKQ  612 (851)
Q Consensus       583 -------------------------------------------------~~~lV~Ey~~~gsL~~~L~~~~-~~~l~~~~  612 (851)
                                                                       ..++||||+++|+|.+++.... .....+..
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  165 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV  165 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence                                                             2899999999999999996643 23345667


Q ss_pred             hHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc----------ccccccccCCcc
Q 047215          613 RLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT----------HVSTAVKGSFGY  682 (851)
Q Consensus       613 ~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~----------~~~~~~~gt~~y  682 (851)
                      ++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++........          .......||+.|
T Consensus       166 ~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  242 (332)
T 3qd2_B          166 CLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY  242 (332)
T ss_dssp             HHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred             HHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence            89999999999999995   89999999999999999999999999999864432111          122345799999


Q ss_pred             cCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHH
Q 047215          683 LDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGE  762 (851)
Q Consensus       683 ~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~  762 (851)
                      +|||++.+..++.++|||||||++|||++|..|+..        ........ ...        .. ........+.+.+
T Consensus       243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--------~~~~~~~~-~~~--------~~-~~~~~~~~~~~~~  304 (332)
T 3qd2_B          243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--------RVRIITDV-RNL--------KF-PLLFTQKYPQEHM  304 (332)
T ss_dssp             SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--------HHHHHHHH-HTT--------CC-CHHHHHHCHHHHH
T ss_pred             cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--------HHHHHHHh-hcc--------CC-CcccccCChhHHH
Confidence            999999999999999999999999999998654210        01100000 000        00 0111334466799


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcc
Q 047215          763 IAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMR  797 (851)
Q Consensus       763 l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~  797 (851)
                      ++.+||+.||.+|||++|+++|         +|++
T Consensus       305 li~~~l~~~p~~Rps~~~~l~~---------~~f~  330 (332)
T 3qd2_B          305 MVQDMLSPSPTERPEATDIIEN---------AIFE  330 (332)
T ss_dssp             HHHHHHCSSGGGSCCHHHHHHS---------TTCC
T ss_pred             HHHHHccCCCCcCCCHHHHhhc---------hhhh
Confidence            9999999999999999999999         8875

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=5.1e-39  Score=344.69  Aligned_cols=261  Identities=21%  Similarity=0.328  Sum_probs=209.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC----cceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED----CTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~----~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .++|...+.||+|+||.||+|+..+    +..+|+|.+... .....+.+.+|+.++++++||||+++++++..+ ..++
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~   89 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI   89 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence            4678899999999999999998643    235899988765 445567899999999999999999999998754 5689


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+++++|.+++.... ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++....
T Consensus        90 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  165 (281)
T 3cc6_A           90 IMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIED  165 (281)
T ss_dssp             EEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred             EEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence            999999999999986532 458899999999999999999995   8999999999999999999999999999986433


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+.   ....    ...       
T Consensus       166 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~---~~~~----~~~-------  230 (281)
T 3cc6_A          166 EDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV---IGVL----EKG-------  230 (281)
T ss_dssp             --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH---HHHH----HHT-------
T ss_pred             ccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH---HHHH----hcC-------
Confidence            211 12234457889999999999999999999999999999998 9999875433221   1111    011       


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhh
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEA  794 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~  794 (851)
                        .....+..+++.+.+++.+||+.||.+|||+.|++++|+.+.+....
T Consensus       231 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~  277 (281)
T 3cc6_A          231 --DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD  277 (281)
T ss_dssp             --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             --CCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhhh
Confidence              01112334556799999999999999999999999999998876554

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=7.8e-40  Score=361.89  Aligned_cols=252  Identities=25%  Similarity=0.380  Sum_probs=206.7

Q ss_pred             HHHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCc
Q 047215          509 RVATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNE  583 (851)
Q Consensus       509 ~~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~  583 (851)
                      ....++|...++||+|+||.||+|+.. +++.+|+|++....   ......+..|..++.++ +||||+++++++...+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            345588999999999999999999975 57889999886531   23456678899999987 89999999999999999


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .++||||+++|+|.+++...  ..+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++.
T Consensus        93 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~  167 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKE  167 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence            99999999999999999643  358899999999999999999996   8999999999999999999999999999985


Q ss_pred             CCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      ....  .......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+   +   ..... ..     
T Consensus       168 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~---~~~i~-~~-----  233 (345)
T 1xjd_A          168 NMLG--DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE---L---FHSIR-MD-----  233 (345)
T ss_dssp             CCCT--TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---H---HHHHH-HC-----
T ss_pred             cccC--CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH---H---HHHHH-hC-----
Confidence            3221  122345689999999999999999999999999999999999999997543211   1   11111 00     


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHH-HHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMG-EVLWH  784 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~-evl~~  784 (851)
                       .+    .++...+..+.+++.+||+.||.+||++. ++++|
T Consensus       234 -~~----~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h  270 (345)
T 1xjd_A          234 -NP----FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH  270 (345)
T ss_dssp             -CC----CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred             -CC----CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence             11    22334556789999999999999999998 89888

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=1.8e-39  Score=347.86  Aligned_cols=247  Identities=25%  Similarity=0.397  Sum_probs=202.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      .++|+..+.||+|+||.||+|... ++..+|+|++....   ......+.+|+.++++++||||+++++++...+..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            467999999999999999999865 45688999875432   22346788999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++......
T Consensus        88 ~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~  162 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS  162 (279)
T ss_dssp             ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred             EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence            9999999999998543  358899999999999999999994   89999999999999999999999999998653321


Q ss_pred             CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                          ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+      .......           
T Consensus       163 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~-----------  221 (279)
T 3fdn_A          163 ----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE------TYKRISR-----------  221 (279)
T ss_dssp             ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHH-----------
T ss_pred             ----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH------HHHHHHh-----------
Confidence                2234578999999999999999999999999999999999999987543211      1111110           


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ....++...+..+.+++.+||+.||.+|||++|+++|
T Consensus       222 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          222 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             TCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             CCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            1112334455678999999999999999999999999

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.9e-39  Score=352.02  Aligned_cols=263  Identities=25%  Similarity=0.421  Sum_probs=206.9

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC-----cceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED-----CTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~-----~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      .++|...+.||+|+||.||+|+...     +..+|+|.+... .......+.+|+.++++++||||+++++++...+..+
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence            3567788999999999999998653     235899998764 3445667999999999999999999999999999999


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      +||||+++|+|.+++.... ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       123 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~  198 (333)
T 1mqb_A          123 IITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  198 (333)
T ss_dssp             EEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             EEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence            9999999999999986542 468999999999999999999995   899999999999999999999999999998643


Q ss_pred             CCCc-cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          666 SMEH-THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       666 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      .... ........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||......+   +   ..... .+     
T Consensus       199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~---~---~~~~~-~~-----  266 (333)
T 1mqb_A          199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE---V---MKAIN-DG-----  266 (333)
T ss_dssp             ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---H---HHHHH-TT-----
T ss_pred             cccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH---H---HHHHH-CC-----
Confidence            3211 111223446789999999999999999999999999999999 998886543211   1   11111 11     


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhh
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEA  794 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~  794 (851)
                          .....+..++..+.+++.+||+.||.+||++.+++++|+.+.+....
T Consensus       267 ----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~  313 (333)
T 1mqb_A          267 ----FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS  313 (333)
T ss_dssp             ----CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred             ----CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence                11122345667799999999999999999999999999988765443

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.2e-39  Score=344.32  Aligned_cols=259  Identities=24%  Similarity=0.366  Sum_probs=210.5

Q ss_pred             cCCceee-eeeeecceEEEEEEEc---CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          513 NNFDESL-MIGVGGFGKVFKGEIE---DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       513 ~~f~~~~-~LG~G~fG~Vykg~~~---~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      ++|...+ .||+|+||.||+|...   .+..+|+|++... .....+.+.+|++++++++||||+++++++ ..+..++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            4566665 8999999999999853   5677999998765 445667899999999999999999999999 45679999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+++++|.+++... ...+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++.....
T Consensus        88 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~  163 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD  163 (287)
T ss_dssp             EECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred             EEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence            9999999999998643 3468999999999999999999995   89999999999999999999999999999865332


Q ss_pred             Ccc-ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          668 EHT-HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       668 ~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+   ....    ...+       
T Consensus       164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~----i~~~-------  229 (287)
T 1u59_A          164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VMAF----IEQG-------  229 (287)
T ss_dssp             SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH---HHHH----HHTT-------
T ss_pred             cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH---HHHH----HhcC-------
Confidence            221 12233457889999999998899999999999999999998 999987643321   1111    1111       


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhh
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH  792 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  792 (851)
                        .....+..++..+.+++.+||+.||.+||++.+++++|+.+....
T Consensus       230 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  274 (287)
T 1u59_A          230 --KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  274 (287)
T ss_dssp             --CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             --CcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence              112234556678999999999999999999999999999876543

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=5.6e-39  Score=346.06  Aligned_cols=259  Identities=29%  Similarity=0.532  Sum_probs=197.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .++|...++||+|+||.||+|+..+  .+|+|++...  .....+.|.+|++++++++||||+++++++. ....++|||
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e   99 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQ   99 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred             ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEEE
Confidence            4678999999999999999998654  4788887644  4556678999999999999999999999764 456899999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++++|.+++.... ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus       100 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  175 (289)
T 3og7_A          100 WCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG  175 (289)
T ss_dssp             CCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred             ecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceeccccccccc
Confidence            999999999986543 568999999999999999999995   8999999999999999999999999999976443223


Q ss_pred             cccccccccCCcccCccccc---ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          670 THVSTAVKGSFGYLDPEYFW---RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      ........||+.|+|||.+.   +..++.++||||||+++|||++|+.||......+.  +    ......+..    .+
T Consensus       176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~----~~~~~~~~~----~~  245 (289)
T 3og7_A          176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--I----IEMVGRGSL----SP  245 (289)
T ss_dssp             --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH--H----HHHHHHTSC----CC
T ss_pred             cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH--H----HHHhccccc----Cc
Confidence            33334567999999999986   66789999999999999999999999976433221  1    111111111    11


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      .+ ......++..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus       246 ~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l  286 (289)
T 3og7_A          246 DL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL  286 (289)
T ss_dssp             CT-TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             ch-hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            11 122345667899999999999999999999999998865

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=3.5e-39  Score=351.61  Aligned_cols=268  Identities=24%  Similarity=0.409  Sum_probs=204.2

Q ss_pred             HHHHHHHhcCCceeeeeeeecceEEEEEEEcC----cceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEE
Q 047215          505 LAEIRVATNNFDESLMIGVGGFGKVFKGEIED----CTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFC  578 (851)
Q Consensus       505 ~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~----~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~  578 (851)
                      +.++....++|...+.||+|+||.||+|+...    +..+|+|++...  .....+.+.+|+.++++++||||+++++++
T Consensus        26 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~  105 (313)
T 3brb_A           26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVC  105 (313)
T ss_dssp             TTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             HHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence            34445566889999999999999999998643    347899988754  445567899999999999999999999999


Q ss_pred             ccCC-----cEEEEEEecCCcchhhhccC----CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC
Q 047215          579 DEQN-----EMILVYEYMANGTLRSHLFG----SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE  649 (851)
Q Consensus       579 ~~~~-----~~~lV~Ey~~~gsL~~~L~~----~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~  649 (851)
                      ...+     ..++||||+++|+|.+++..    .....+++.+++.++.|++.||.|||+   .+|+||||||+|||++.
T Consensus       106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~  182 (313)
T 3brb_A          106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRD  182 (313)
T ss_dssp             EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECT
T ss_pred             eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcC
Confidence            7654     35999999999999998842    234568999999999999999999995   89999999999999999


Q ss_pred             CCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHH
Q 047215          650 NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLA  728 (851)
Q Consensus       650 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~  728 (851)
                      ++.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......   ..
T Consensus       183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~  259 (313)
T 3brb_A          183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE---MY  259 (313)
T ss_dssp             TSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HH
T ss_pred             CCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH---HH
Confidence            99999999999976443322222344567889999999999999999999999999999999 777876543322   11


Q ss_pred             HHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          729 DWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       729 ~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      ..   .. .+         .....+..++..+.+++.+||+.||.+|||+.+++++|+.+++.
T Consensus       260 ~~---~~-~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~  309 (313)
T 3brb_A          260 DY---LL-HG---------HRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES  309 (313)
T ss_dssp             HH---HH-TT---------CCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HH---HH-cC---------CCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            11   10 00         01123345567799999999999999999999999999988653

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=1.7e-39  Score=360.46  Aligned_cols=254  Identities=21%  Similarity=0.248  Sum_probs=203.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-----ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-----SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      .+.|+..+.||+|+||.||+|+.. +++.+|||++...     .....+.+.+|+.++++++||||+++++++..++..+
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            357899999999999999999864 5788999987532     1224577999999999999999999999999999999


Q ss_pred             EEEEecCCcchhhhccCC--CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe---EEEeeccc
Q 047215          586 LVYEYMANGTLRSHLFGS--DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV---AKMSDFGL  660 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~---~kl~DFGl  660 (851)
                      +||||+++|+|.+.+...  ....+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.   +||+|||+
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            999999999998877532  23458899999999999999999995   89999999999999976554   99999999


Q ss_pred             cccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc
Q 047215          661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL  740 (851)
Q Consensus       661 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  740 (851)
                      ++......  .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....    .+.   .... .+..
T Consensus       180 a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~---~~i~-~~~~  249 (351)
T 3c0i_A          180 AIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE----RLF---EGII-KGKY  249 (351)
T ss_dssp             CEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH----HHH---HHHH-HTCC
T ss_pred             eeEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH----HHH---HHHH-cCCC
Confidence            97643321  123445799999999999999999999999999999999999999975311    111   1111 1100


Q ss_pred             ccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                        ...+...    ...+..+.+|+.+||+.||.+|||+.|+++|
T Consensus       250 --~~~~~~~----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  287 (351)
T 3c0i_A          250 --KMNPRQW----SHISESAKDLVRRMLMLDPAERITVYEALNH  287 (351)
T ss_dssp             --CCCHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             --CCCcccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence              0011000    2345678999999999999999999999999

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=2.3e-39  Score=359.07  Aligned_cols=245  Identities=20%  Similarity=0.284  Sum_probs=206.4

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+++.. +++.+|+|++...   .....+.+.+|+.+|++++||||+++++++..++..++||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            67999999999999999999975 5788999987643   2234567889999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++..... 
T Consensus       121 e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-  194 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-  194 (350)
T ss_dssp             ECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred             cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence            999999999999653  358999999999999999999995   89999999999999999999999999999864321 


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                          ....+||+.|+|||++.+..++.++|||||||++|||++|+.||......+      .......         .. 
T Consensus       195 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~---------~~-  254 (350)
T 1rdq_E          195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVS---------GK-  254 (350)
T ss_dssp             ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHH---------CC-
T ss_pred             ----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH------HHHHHHc---------CC-
Confidence                234679999999999999999999999999999999999999997543211      1111111         11 


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPT-----MGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  784 (851)
                       ..++...+..+.+++.+||+.||.+||+     ++|+++|
T Consensus       255 -~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          255 -VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             -CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             -CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence             1233445667999999999999999998     9999999

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=2.6e-39  Score=353.80  Aligned_cols=272  Identities=25%  Similarity=0.376  Sum_probs=211.2

Q ss_pred             CceeeeeeeecceEEEEEEEc-----CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc--CCcEEE
Q 047215          515 FDESLMIGVGGFGKVFKGEIE-----DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMIL  586 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~~-----~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~--~~~~~l  586 (851)
                      |+..++||+|+||.||++.+.     +++.+|||++... .....+.+.+|++++++++||||+++++++..  ....++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            488899999999999998753     5678999998765 34556789999999999999999999999976  467899


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+++|+|.+++...   .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       113 v~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~  186 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE  186 (318)
T ss_dssp             EECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred             EEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccccccccc
Confidence            99999999999999654   38999999999999999999995   8999999999999999999999999999986543


Q ss_pred             CCc-cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          667 MEH-THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       667 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ... ........+|..|+|||.+.+..++.++||||||+++|||++|+.|+...... ......+.........+.+.+.
T Consensus       187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  265 (318)
T 3lxp_A          187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK-FLELIGIAQGQMTVLRLTELLE  265 (318)
T ss_dssp             TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH-HHHHHCSCCHHHHHHHHHHHHH
T ss_pred             cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchh-hhhhhcccccchhHHHHHHHHh
Confidence            222 12234456888999999999999999999999999999999999887642111 0000000000000011111222


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhh
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE  793 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~  793 (851)
                      .......+..++..+.+|+.+||+.||.+|||++|+++.|+.+.+...
T Consensus       266 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~  313 (318)
T 3lxp_A          266 RGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ  313 (318)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence            222333455667789999999999999999999999999988765443

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=1.8e-39  Score=356.31  Aligned_cols=257  Identities=19%  Similarity=0.279  Sum_probs=185.7

Q ss_pred             eeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEEEEEecCCcch
Q 047215          519 LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILVYEYMANGTL  596 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL  596 (851)
                      ++||+|+||.||+|... +++.+|||++...   ....+.+|+.+++++. ||||+++++++..+...++||||+++|+|
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   93 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL   93 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence            67999999999999875 5788999998643   3456788999999997 99999999999999999999999999999


Q ss_pred             hhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC---eEEEeeccccccCCCCCccccc
Q 047215          597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF---VAKMSDFGLSKTGPSMEHTHVS  673 (851)
Q Consensus       597 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~---~~kl~DFGla~~~~~~~~~~~~  673 (851)
                      .+++...  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++   .+||+|||+++.....  ....
T Consensus        94 ~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--~~~~  166 (325)
T 3kn6_A           94 FERIKKK--KHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD--NQPL  166 (325)
T ss_dssp             HHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred             HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC--CCcc
Confidence            9999654  468999999999999999999995   8999999999999997655   8999999999864332  1223


Q ss_pred             cccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchh-cHHHHHHHHhhhcccccccCccCCCCC
Q 047215          674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI-NLADWAMKWQKQRSLKSIIDPHLKGNY  752 (851)
Q Consensus       674 ~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~-~l~~~~~~~~~~~~~~~i~d~~l~~~~  752 (851)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ...+..... ..+..      ......
T Consensus       167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i-~~~~~------~~~~~~  239 (325)
T 3kn6_A          167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI-KKGDF------SFEGEA  239 (325)
T ss_dssp             -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHH-TTTCC------CCCSHH
T ss_pred             cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHH-HcCCC------CCCccc
Confidence            4556899999999999999999999999999999999999999764332111 111111111 11100      011111


Q ss_pred             ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCCC
Q 047215          753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDR  801 (851)
Q Consensus       753 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~~  801 (851)
                      ....++.+.+|+.+||+.||.+|||++|+++|         +|++....
T Consensus       240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h---------~w~~~~~~  279 (325)
T 3kn6_A          240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN---------EWLQDGSQ  279 (325)
T ss_dssp             HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC---------GGGCTTCC
T ss_pred             ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC---------hhhccCcc
Confidence            12356779999999999999999999999999         99875433

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.9e-40  Score=371.64  Aligned_cols=271  Identities=21%  Similarity=0.260  Sum_probs=214.5

Q ss_pred             cCHHHHHHHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEE
Q 047215          503 FTLAEIRVATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFC  578 (851)
Q Consensus       503 ~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~  578 (851)
                      +.+.+++...++|+..++||+|+||.||+++.. +++.+|+|++...   .......+.+|+.++.+++||||+++++++
T Consensus        51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  130 (412)
T 2vd5_A           51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF  130 (412)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            455666777899999999999999999999975 6789999998643   122334588999999999999999999999


Q ss_pred             ccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeec
Q 047215          579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF  658 (851)
Q Consensus       579 ~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DF  658 (851)
                      ..++.++|||||+++|+|.++|.... ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+||
T Consensus       131 ~~~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DF  206 (412)
T 2vd5_A          131 QDENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADF  206 (412)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred             eeCCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeec
Confidence            99999999999999999999996432 368899999999999999999995   89999999999999999999999999


Q ss_pred             cccccCCCCCccccccccccCCcccCccccc-------ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHH
Q 047215          659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW-------RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA  731 (851)
Q Consensus       659 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~  731 (851)
                      |+++...... .......+||+.|+|||++.       ...++.++|||||||++|||++|+.||......+.      .
T Consensus       207 Gla~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~------~  279 (412)
T 2vd5_A          207 GSCLKLRADG-TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET------Y  279 (412)
T ss_dssp             TTCEECCTTS-CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------H
T ss_pred             hhheeccCCC-ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH------H
Confidence            9997643322 12233467999999999997       35689999999999999999999999976432211      1


Q ss_pred             HHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCC---CCHHHHHHHHHHHHHhhhhhcccCC
Q 047215          732 MKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR---PTMGEVLWHLEYVLQLHEAWMRTDD  800 (851)
Q Consensus       732 ~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Pt~~evl~~L~~~~~~~~~w~~~~~  800 (851)
                      .......  .....|.    .....+..+++|+.+||+ +|.+|   |+++|+++|         +|+...+
T Consensus       280 ~~i~~~~--~~~~~p~----~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H---------pff~~i~  335 (412)
T 2vd5_A          280 GKIVHYK--EHLSLPL----VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH---------PFFFGLD  335 (412)
T ss_dssp             HHHHTHH--HHCCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS---------GGGTTCC
T ss_pred             HHHHhcc--cCcCCCc----cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC---------CCcCCCC
Confidence            1111100  0011111    123445678999999999 99998   699999999         7776543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=3e-39  Score=358.36  Aligned_cols=249  Identities=22%  Similarity=0.318  Sum_probs=206.4

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .++|+..++||+|+||.||+|+... ++.+|+|++...   .....+.+..|..++..+ +||||+++++++...+..++
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            4789999999999999999999764 678999988653   223456788999999988 89999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus        99 v~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  173 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW  173 (353)
T ss_dssp             EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence            99999999999999643  358999999999999999999995   8999999999999999999999999999985322


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      .  .......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+   +   .....         ..
T Consensus       174 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~---~---~~~i~---------~~  236 (353)
T 2i0e_A          174 D--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---L---FQSIM---------EH  236 (353)
T ss_dssp             T--TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---H---HHHHH---------HC
T ss_pred             C--CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH---H---HHHHH---------hC
Confidence            1  122345679999999999999999999999999999999999999997543211   1   11111         11


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPT-----MGEVLWH  784 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  784 (851)
                      .  ..++...+..+.+|+.+||+.||.+||+     ++++++|
T Consensus       237 ~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          237 N--VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             C--CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred             C--CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            1  1233455667999999999999999995     6899988

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=6.4e-39  Score=344.86  Aligned_cols=252  Identities=27%  Similarity=0.511  Sum_probs=203.8

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhh-------HHHHHHHHHHHHhcCCcceeeEEEEEccCCc
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQG-------LAEFETEIEMLSKLRHRHLVSLIGFCDEQNE  583 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~-------~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~  583 (851)
                      .++|+..+.||+|+||.||+|+. .+++.+|+|++.......       .+.+.+|+.++++++||||+++++++.... 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            36889999999999999999987 467889999886543211       167899999999999999999999997665 


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCC--eEEcCCCCCCeEEcCCCe-----EEEe
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG--IIHRDVKTTNILLDENFV-----AKMS  656 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~--iiHrDlk~~NILld~~~~-----~kl~  656 (851)
                       ++||||+++|+|.+.+.... ..+++..+..++.|++.||+|||+   .+  |+||||||+|||++.++.     +||+
T Consensus        97 -~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~  171 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKVA  171 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred             -eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence             79999999999998886543 468999999999999999999995   77  999999999999987776     9999


Q ss_pred             eccccccCCCCCccccccccccCCcccCccccc--ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHH
Q 047215          657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW--RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW  734 (851)
Q Consensus       657 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~  734 (851)
                      |||+++....     ......||+.|+|||.+.  ...++.++|||||||++|||++|+.||........ ..   ....
T Consensus       172 Dfg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~---~~~~  242 (287)
T 4f0f_A          172 DFGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KF---INMI  242 (287)
T ss_dssp             CCTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH-HH---HHHH
T ss_pred             CCCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH-HH---HHHH
Confidence            9999975322     233467899999999984  55688999999999999999999999976443221 11   1111


Q ss_pred             hhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          735 QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       735 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      .         ........+..+++.+.+++.+||+.||.+|||++|+++.|+.
T Consensus       243 ~---------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          243 R---------EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             H---------HSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             h---------ccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            1         1122223445566779999999999999999999999999864

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=7.5e-39  Score=343.61  Aligned_cols=258  Identities=21%  Similarity=0.309  Sum_probs=209.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      .++|+..+.||+|+||.||+|... ++..+|+|++...  .....+.+.+|+.++++++||||+++++++..++..++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            478999999999999999999875 5788999987543  4455678899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe---EEEeeccccccCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV---AKMSDFGLSKTGP  665 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~---~kl~DFGla~~~~  665 (851)
                      ||+++++|.+.+...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.   +||+|||++....
T Consensus        85 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~  159 (284)
T 3kk8_A           85 DLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  159 (284)
T ss_dssp             CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             ecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence            999999998888543  458999999999999999999995   89999999999999976554   9999999997643


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ..   .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......   .   ..... .+..     
T Consensus       160 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~---~~~~~-~~~~-----  224 (284)
T 3kk8_A          160 DS---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR---L---YAQIK-AGAY-----  224 (284)
T ss_dssp             SS---CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---H---HHHHH-HTCC-----
T ss_pred             cC---ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH---H---HHHHH-hccc-----
Confidence            22   12234578999999999999999999999999999999999999986543221   1   11111 1110     


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                       ..........++.+.+++.+||+.||.+|||++|+++|         +|+...
T Consensus       225 -~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h---------~~~~~~  268 (284)
T 3kk8_A          225 -DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV---------PWICNR  268 (284)
T ss_dssp             -CCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS---------HHHHSC
T ss_pred             -cCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC---------ccccCC
Confidence             01111123445678999999999999999999999999         787643

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=5.4e-39  Score=349.58  Aligned_cols=254  Identities=27%  Similarity=0.471  Sum_probs=199.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecC
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      ++|+..+.||+|+||.||+|+.. ++.+|+|++...  ...+.|.+|++++++++||||+++++++.+  ..++||||++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~   82 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE   82 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence            57888999999999999999876 567899998654  345789999999999999999999999874  5799999999


Q ss_pred             CcchhhhccCCC-CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe-EEEeeccccccCCCCCcc
Q 047215          593 NGTLRSHLFGSD-LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV-AKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       593 ~gsL~~~L~~~~-~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~-~kl~DFGla~~~~~~~~~  670 (851)
                      +|+|.+++.... ...+++.+++.++.|+++||.|||+...++|+||||||+|||++.++. +||+|||+++.....   
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~---  159 (307)
T 2eva_A           83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---  159 (307)
T ss_dssp             TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred             CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence            999999997543 235788999999999999999999533378999999999999988775 899999998753221   


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                        .....||+.|+|||++.+..++.++||||||+++|||++|+.||........  ...|  ... .+         ...
T Consensus       160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~--~~~-~~---------~~~  223 (307)
T 2eva_A          160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF--RIMW--AVH-NG---------TRP  223 (307)
T ss_dssp             -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH--HHHH--HHH-TT---------CCC
T ss_pred             --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH--HHHH--HHh-cC---------CCC
Confidence              2234689999999999999999999999999999999999999875432211  0111  110 11         011


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      .....++..+.+++.+||+.||.+|||+++++++|+.+.+
T Consensus       224 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  263 (307)
T 2eva_A          224 PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR  263 (307)
T ss_dssp             CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred             CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            2223455678999999999999999999999999987753

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.8e-39  Score=349.42  Aligned_cols=251  Identities=24%  Similarity=0.360  Sum_probs=204.0

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC-c-------ceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCc
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED-C-------TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE  583 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~-~-------~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~  583 (851)
                      .++|...+.||+|+||.||+|+... +       ..+|+|.+........+.+.+|++++++++||||+++++++..++.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            3678889999999999999998653 2       4689999877766777889999999999999999999999999999


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe--------EEE
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV--------AKM  655 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~--------~kl  655 (851)
                      .++||||+++|+|.+++.... ..+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.        +||
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl  162 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKL  162 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred             CEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccceeee
Confidence            999999999999999996543 348899999999999999999995   89999999999999988877        999


Q ss_pred             eeccccccCCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHH
Q 047215          656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW  734 (851)
Q Consensus       656 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~  734 (851)
                      +|||+++....      .....||+.|+|||++.+ ..++.++||||||+++|||++|+.|+........     .....
T Consensus       163 ~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-----~~~~~  231 (289)
T 4fvq_A          163 SDPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR-----KLQFY  231 (289)
T ss_dssp             CCCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----HHHHH
T ss_pred             ccCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH-----HHHHh
Confidence            99999875322      123457899999999987 7799999999999999999997665543322211     01111


Q ss_pred             hhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          735 QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       735 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                      ..        .+.    .+...+..+.+++.+||+.||.+|||++|++++|+.+.
T Consensus       232 ~~--------~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~  274 (289)
T 4fvq_A          232 ED--------RHQ----LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF  274 (289)
T ss_dssp             HT--------TCC----CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred             hc--------cCC----CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            10        011    11222345889999999999999999999999988554

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.4e-38  Score=359.38  Aligned_cols=251  Identities=21%  Similarity=0.314  Sum_probs=193.7

Q ss_pred             cCCcee-eeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHh-cCCcceeeEEEEEcc----CCcEE
Q 047215          513 NNFDES-LMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSK-LRHRHLVSLIGFCDE----QNEMI  585 (851)
Q Consensus       513 ~~f~~~-~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~-l~HpnIv~l~g~~~~----~~~~~  585 (851)
                      ++|... ++||+|+||.||++... ++..+|||++...     ..+.+|+.++.+ .+||||+++++++..    ++.++
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            466665 68999999999999875 5778999998632     456788888755 489999999998864    66789


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC---CCeEEEeeccccc
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE---NFVAKMSDFGLSK  662 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~---~~~~kl~DFGla~  662 (851)
                      |||||+++|+|.+++.......+++.++..++.|++.||.|||+   .+|+||||||+|||++.   ++.+||+|||+++
T Consensus       136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~  212 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK  212 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence            99999999999999977655679999999999999999999995   89999999999999987   7899999999998


Q ss_pred             cCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchh-cHHHHHHHHhhhcccc
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI-NLADWAMKWQKQRSLK  741 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~-~l~~~~~~~~~~~~~~  741 (851)
                      .....   ......+||+.|+|||++.+..++.++|||||||+||||++|+.||......... ......    ..+.. 
T Consensus       213 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i----~~~~~-  284 (400)
T 1nxk_A          213 ETTSH---NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMGQY-  284 (400)
T ss_dssp             ECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH----HHTCC-
T ss_pred             ccCCC---CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH----HcCcc-
Confidence            64321   2234567899999999999999999999999999999999999999765433211 111111    01110 


Q ss_pred             cccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          742 SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       742 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                           .+.......++..+.+|+.+||+.||.+|||+.|+++|
T Consensus       285 -----~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          285 -----EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             -----CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             -----cCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                 01111113455678999999999999999999999999

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.1e-39  Score=381.95  Aligned_cols=255  Identities=29%  Similarity=0.439  Sum_probs=210.0

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ..++|...++||+|+||.||+|++.++..||||++.... ...+.|.+|+++|++++||||++++++|.. +..+|||||
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~  342 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  342 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence            346788899999999999999999888889999987654 335689999999999999999999999976 678999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      |++|+|.++|.......+++.+++.++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+++..... ..
T Consensus       343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~  418 (535)
T 2h8h_A          343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDN-EY  418 (535)
T ss_dssp             CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH-HH
T ss_pred             hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCC-ce
Confidence            999999999965444568999999999999999999995   89999999999999999999999999999864321 11


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                      .......++..|+|||++....++.++|||||||+||||++ |+.||......+   +   .... ..         ..+
T Consensus       419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~---~---~~~i-~~---------~~~  482 (535)
T 2h8h_A          419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---V---LDQV-ER---------GYR  482 (535)
T ss_dssp             HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH---H---HHHH-HT---------TCC
T ss_pred             ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---H---HHHH-Hc---------CCC
Confidence            12233456789999999999999999999999999999999 888886543221   1   1111 11         111


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      ...+..++..+.+|+.+||+.||++|||++++++.|+.
T Consensus       483 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~  520 (535)
T 2h8h_A          483 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED  520 (535)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            22345667789999999999999999999999999874

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.6e-39  Score=356.32  Aligned_cols=265  Identities=22%  Similarity=0.256  Sum_probs=204.2

Q ss_pred             HHHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-----ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC
Q 047215          509 RVATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-----SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN  582 (851)
Q Consensus       509 ~~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~  582 (851)
                      ....++|+..+.||+|+||.||+|+.. ++..+|+|++...     .....+.+.+|++++++++||||+++++++..++
T Consensus        22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  101 (345)
T 3hko_A           22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ  101 (345)
T ss_dssp             HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence            345678999999999999999999874 5678899987542     3455678999999999999999999999999999


Q ss_pred             cEEEEEEecCCcchhhhccCC--------------------------------------CCCCCchhhhHHHHHHHHHHH
Q 047215          583 EMILVYEYMANGTLRSHLFGS--------------------------------------DLPPLTWKQRLDACIGAARGL  624 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~--------------------------------------~~~~l~~~~~~~i~~~ia~gL  624 (851)
                      ..++||||+++|+|.+++...                                      ....+++..+..++.|++.||
T Consensus       102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  181 (345)
T 3hko_A          102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL  181 (345)
T ss_dssp             EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence            999999999999999988420                                      011245777889999999999


Q ss_pred             HHhhcCCCCCeEEcCCCCCCeEEcCCC--eEEEeeccccccCCCCC--ccccccccccCCcccCcccccc--cCCCchHH
Q 047215          625 HYLHTGAERGIIHRDVKTTNILLDENF--VAKMSDFGLSKTGPSME--HTHVSTAVKGSFGYLDPEYFWR--QQLTEKSD  698 (851)
Q Consensus       625 ~yLHs~~~~~iiHrDlk~~NILld~~~--~~kl~DFGla~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~--~~~t~ksD  698 (851)
                      +|||+   .+|+||||||+|||++.++  .+||+|||+++......  .........||+.|+|||.+.+  ..++.++|
T Consensus       182 ~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D  258 (345)
T 3hko_A          182 HYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD  258 (345)
T ss_dssp             HHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred             HHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence            99996   8999999999999998766  89999999997532211  1112345679999999999975  68899999


Q ss_pred             HHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCH
Q 047215          699 VYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTM  778 (851)
Q Consensus       699 VwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~  778 (851)
                      ||||||++|||++|+.||......+.      ........  .     ..........+..+.+|+.+||+.||.+|||+
T Consensus       259 iwslG~il~el~~g~~pf~~~~~~~~------~~~~~~~~--~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  325 (345)
T 3hko_A          259 AWSAGVLLHLLLMGAVPFPGVNDADT------ISQVLNKK--L-----CFENPNYNVLSPLARDLLSNLLNRNVDERFDA  325 (345)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHHCC--C-----CTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred             HHHHHHHHHHHHHCCCCCCCCChHHH------HHHHHhcc--c-----ccCCcccccCCHHHHHHHHHHcCCChhHCCCH
Confidence            99999999999999999875432211      11111110  0     00111112345679999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhhccc
Q 047215          779 GEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       779 ~evl~~L~~~~~~~~~w~~~  798 (851)
                      .|+++|         +|++.
T Consensus       326 ~~~l~h---------p~~~~  336 (345)
T 3hko_A          326 MRALQH---------PWISQ  336 (345)
T ss_dssp             HHHHHS---------HHHHT
T ss_pred             HHHhcC---------hhhcc
Confidence            999999         77764

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=4.8e-39  Score=375.21  Aligned_cols=255  Identities=24%  Similarity=0.358  Sum_probs=211.3

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      ..++|+..++||+|+||.||+|+.. +++.+|+|++...   .......+.+|+.+|++++||||+++++++..++..++
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            3467999999999999999999875 6789999988643   22345668899999999999999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+++|+|.+++.......+++.++..++.||+.||.|||+   ++|+||||||+||||+.++.+||+|||+++....
T Consensus       262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~  338 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE  338 (576)
T ss_dssp             EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence            9999999999999977665669999999999999999999996   8999999999999999999999999999986433


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      ..   .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.........  ....... ..         
T Consensus       339 ~~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~--~~i~~~i-~~---------  403 (576)
T 2acx_A          339 GQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR--EEVERLV-KE---------  403 (576)
T ss_dssp             TC---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH--HHHHHHH-HH---------
T ss_pred             Cc---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH--HHHHHHh-hc---------
Confidence            21   223457999999999999989999999999999999999999999765432211  1111111 00         


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                       ....++...+..+.+|+.+||+.||.+||     +++|+++|
T Consensus       404 -~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          404 -VPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             -CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             -ccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence             01123344556799999999999999999     78999999

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=1.5e-39  Score=354.76  Aligned_cols=271  Identities=23%  Similarity=0.289  Sum_probs=202.2

Q ss_pred             cCCcee-eeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDES-LMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~-~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      +.|.+. ++||+|+||.||+|+. .+++.+|||++..........+.+|++++.++ +||||+++++++..++..++|||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            456663 6799999999999985 46788999998776656677899999999995 79999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe---EEEeeccccccCCC
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV---AKMSDFGLSKTGPS  666 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~---~kl~DFGla~~~~~  666 (851)
                      |+++|+|.+++...  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.   +||+|||+++....
T Consensus        92 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~  166 (316)
T 2ac3_A           92 KMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL  166 (316)
T ss_dssp             CCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred             cCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence            99999999999653  358899999999999999999996   89999999999999987765   99999999875332


Q ss_pred             CCc-----cccccccccCCcccCcccccc-----cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh
Q 047215          667 MEH-----THVSTAVKGSFGYLDPEYFWR-----QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK  736 (851)
Q Consensus       667 ~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~  736 (851)
                      ...     ........||+.|+|||++.+     ..++.++|||||||++|||++|+.||......+.............
T Consensus       167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  246 (316)
T 2ac3_A          167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ  246 (316)
T ss_dssp             ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred             CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence            111     111234569999999999975     5688999999999999999999999976543221000000000000


Q ss_pred             hcccccccCccCCCCCC----hhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          737 QRSLKSIIDPHLKGNYS----PESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       737 ~~~~~~i~d~~l~~~~~----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      ......+.....  .++    ...+..+.+|+.+||+.||.+|||++|+++|         +|++..
T Consensus       247 ~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h---------p~~~~~  302 (316)
T 2ac3_A          247 NMLFESIQEGKY--EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH---------PWVQGC  302 (316)
T ss_dssp             HHHHHHHHHCCC--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS---------TTCC--
T ss_pred             HHHHHHHhccCc--ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC---------hhhcCC
Confidence            000000111111  111    1245678999999999999999999999999         998753

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-38  Score=343.51  Aligned_cols=259  Identities=25%  Similarity=0.375  Sum_probs=206.4

Q ss_pred             CCceeeeeeeecceEEEEEEEcCc----ceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcE-EEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIEDC----TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM-ILV  587 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~~~----~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~-~lV  587 (851)
                      .|...++||+|+||.||+|+..+.    ..+|+|.+... .....+.+.+|+.++++++||||+++++++...+.. ++|
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            455668999999999999986432    36899988764 445567899999999999999999999999766655 999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+.+|+|.+++.... ..+++.++..++.|++.||+|||+   .+++||||||+|||++.++.+||+|||+++.....
T Consensus       102 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  177 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDR  177 (298)
T ss_dssp             ECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred             EecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence            99999999999996633 568999999999999999999995   89999999999999999999999999999754322


Q ss_pred             C--ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          668 E--HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       668 ~--~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      .  .........+|+.|+|||.+.+..++.++||||||+++|||++|+.|+.......  .+....    ...       
T Consensus       178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~--~~~~~~----~~~-------  244 (298)
T 3pls_A          178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF--DLTHFL----AQG-------  244 (298)
T ss_dssp             GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG--GHHHHH----HTT-------
T ss_pred             cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH--HHHHHh----hcC-------
Confidence            1  1112234567889999999999999999999999999999999766654432221  111111    010       


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                        .....+..++..+.+++.+||+.||.+|||++++++.|+.++..
T Consensus       245 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~  288 (298)
T 3pls_A          245 --RRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA  288 (298)
T ss_dssp             --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             --CCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence              11122344556799999999999999999999999999988754

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=3.5e-39  Score=357.48  Aligned_cols=247  Identities=28%  Similarity=0.404  Sum_probs=201.6

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      .+.|...+.||+|+||.||+|+. .+++.||||++....   ....+.+.+|++++++++||||+++++++..++..++|
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  132 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV  132 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence            35588899999999999999986 567889999886542   33456789999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||++ |+|.+++.... .++++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.... 
T Consensus       133 ~e~~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-  206 (348)
T 1u5q_A          133 MEYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-  206 (348)
T ss_dssp             EECCS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-
T ss_pred             EecCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCC-
Confidence            99997 68877774322 468999999999999999999996   8999999999999999999999999999976432 


Q ss_pred             CccccccccccCCcccCccccc---ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFW---RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                           .....||+.|+|||++.   ...++.++|||||||++|||++|+.||.......      .........      
T Consensus       207 -----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~------~~~~~~~~~------  269 (348)
T 1u5q_A          207 -----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYHIAQNE------  269 (348)
T ss_dssp             -----BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSC------
T ss_pred             -----CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHHhcC------
Confidence                 12356899999999985   5678999999999999999999999986543211      111111111      


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .+.+   .+...+..+.+++.+||+.||.+|||++++++|
T Consensus       270 ~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          270 SPAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             CCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             CCCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            1111   123345668999999999999999999999999

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.7e-39  Score=359.02  Aligned_cols=259  Identities=26%  Similarity=0.415  Sum_probs=197.2

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC--c--ceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEc-cCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED--C--TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCD-EQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~--~--~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~-~~~~~~l  586 (851)
                      ..|+..++||+|+||.||+|+..+  +  ..+|+|.+... .....+.|.+|+.++++++||||++++++|. .++..++
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l  168 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  168 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence            346778899999999999998642  2  35789988654 3455678999999999999999999999975 4568899


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+++|+|.+++.... ..+++.++..++.|+++||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       169 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~  244 (373)
T 3c1x_A          169 VLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD  244 (373)
T ss_dssp             EEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EEECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeeccccccccc
Confidence            999999999999996543 458899999999999999999995   8999999999999999999999999999986432


Q ss_pred             CCcc--ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          667 MEHT--HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       667 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      ....  .......+|+.|+|||.+.+..++.++|||||||++|||++ |.+||......+   .....    ..+.    
T Consensus       245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~~~----~~~~----  313 (373)
T 3c1x_A          245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYL----LQGR----  313 (373)
T ss_dssp             -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHHHH----HTTC----
T ss_pred             cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHHHH----HcCC----
Confidence            2211  12234457889999999999999999999999999999999 555555433322   11111    0110    


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                           ....+..++..+.+++.+||+.||.+|||++|++++|+.+...
T Consensus       314 -----~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~  356 (373)
T 3c1x_A          314 -----RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  356 (373)
T ss_dssp             -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             -----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence                 1112344567799999999999999999999999999987653

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=8.5e-39  Score=346.37  Aligned_cols=263  Identities=24%  Similarity=0.424  Sum_probs=207.5

Q ss_pred             cCCceeeeeeeecceEEEEEEE-----cCcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC--CcE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-----EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ--NEM  584 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-----~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--~~~  584 (851)
                      +.|+..+.||+|+||.||+|++     ..++.+|+|++... .....+.+.+|++++++++||||+++++++...  +..
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4588889999999999999984     35788999998754 334557899999999999999999999999766  678


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  176 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAI  176 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECcccccccc
Confidence            99999999999999985433 458999999999999999999995   89999999999999999999999999999865


Q ss_pred             CCCCcc-ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCC---------cchhcHHHHHHHH
Q 047215          665 PSMEHT-HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLP---------KDQINLADWAMKW  734 (851)
Q Consensus       665 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~---------~~~~~l~~~~~~~  734 (851)
                      ...... .......||..|+|||.+.+..++.++||||||+++|||++|+.|+.....         ...........  
T Consensus       177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--  254 (302)
T 4e5w_A          177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN--  254 (302)
T ss_dssp             CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH--
T ss_pred             cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH--
Confidence            432221 223445688899999999999999999999999999999999887532110         00001111111  


Q ss_pred             hhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          735 QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       735 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                              .+........+..+++.+.+++.+||+.||.+|||++++++.|+.++
T Consensus       255 --------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          255 --------TLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             --------HHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             --------HHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence                    11111122344556678999999999999999999999999998765

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=1.1e-38  Score=366.93  Aligned_cols=247  Identities=26%  Similarity=0.355  Sum_probs=205.9

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|...+.||+|+||.||+|+.. +++.+|||++....   ......+.+|+.+++.++||||+++++++...+..++||
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            67888999999999999999975 67899999886432   233567899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... 
T Consensus        96 E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~-  169 (476)
T 2y94_A           96 EYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-  169 (476)
T ss_dssp             ECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT-
T ss_pred             eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhcccc-
Confidence            999999999999543  468999999999999999999994   89999999999999999999999999999864332 


Q ss_pred             ccccccccccCCcccCcccccccCC-CchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                        ......+||+.|+|||++.+..+ +.++|||||||++|||++|+.||.......   +   ....         .+..
T Consensus       170 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~---~---~~~i---------~~~~  232 (476)
T 2y94_A          170 --EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT---L---FKKI---------CDGI  232 (476)
T ss_dssp             --CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH---H---HHHH---------HTTC
T ss_pred             --ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH---H---HHHH---------hcCC
Confidence              22345679999999999988765 789999999999999999999997543221   1   1111         1111


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .  ..+...+..+.+|+.+||+.||.+|||++|+++|
T Consensus       233 ~--~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h  267 (476)
T 2y94_A          233 F--YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH  267 (476)
T ss_dssp             C--CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             c--CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence            1  1223345678999999999999999999999999

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=6.1e-39  Score=357.77  Aligned_cols=271  Identities=14%  Similarity=0.168  Sum_probs=207.4

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcC------cceeEEeecCCCChhhH-----------HHHHHHHHHHHhcCCcceee
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIED------CTLAAIKRANPQSEQGL-----------AEFETEIEMLSKLRHRHLVS  573 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~------~~~vavK~~~~~~~~~~-----------~~~~~Ei~~l~~l~HpnIv~  573 (851)
                      ..++|...++||+|+||.||+|....      ++.+|||++........           ..+..|+..++.++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            35689999999999999999998765      36789998776543211           12344566677788999999


Q ss_pred             EEEEEccC----CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc-
Q 047215          574 LIGFCDEQ----NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-  648 (851)
Q Consensus       574 l~g~~~~~----~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld-  648 (851)
                      +++++...    ...+|||||+ +++|.+++... ...+++.+++.++.|++.||+|||+   .+|+||||||+|||++ 
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~  187 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNY  187 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEES
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEec
Confidence            99998654    4589999999 99999998653 2569999999999999999999996   8999999999999998 


Q ss_pred             -CCCeEEEeeccccccCCCCCc-----cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCc
Q 047215          649 -ENFVAKMSDFGLSKTGPSMEH-----THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPK  722 (851)
Q Consensus       649 -~~~~~kl~DFGla~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~  722 (851)
                       .++.+||+|||+++.......     ........||+.|+|||++.+..++.++|||||||+||||++|+.||......
T Consensus       188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~  267 (364)
T 3op5_A          188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD  267 (364)
T ss_dssp             SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred             CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence             889999999999976432111     11123455999999999999999999999999999999999999999753322


Q ss_pred             chhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhh
Q 047215          723 DQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH  792 (851)
Q Consensus       723 ~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  792 (851)
                      ..  ...+... .....+..++++.+.   ...++..+.+++..||+.+|.+||+++++++.|+.+++..
T Consensus       268 ~~--~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~  331 (364)
T 3op5_A          268 PK--YVRDSKI-RYRENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI  331 (364)
T ss_dssp             HH--HHHHHHH-HHHHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HH--HHHHHHH-HhhhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence            11  1111111 111223333333332   1234567899999999999999999999999999887643

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=6.1e-39  Score=352.15  Aligned_cols=261  Identities=30%  Similarity=0.466  Sum_probs=207.7

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-Ccce--eEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTL--AAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~--vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      ++|+..+.||+|+||.||+|+.. ++..  +++|++... .....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            67889999999999999999864 3443  488887653 344556789999999999 899999999999999999999


Q ss_pred             EEecCCcchhhhccCCC--------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeE
Q 047215          588 YEYMANGTLRSHLFGSD--------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA  653 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~  653 (851)
                      |||+++|+|.+++....              ...+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCeE
Confidence            99999999999996543              3468999999999999999999995   899999999999999999999


Q ss_pred             EEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHH
Q 047215          654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAM  732 (851)
Q Consensus       654 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~  732 (851)
                      ||+|||+++....   ........+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+      ...
T Consensus       182 kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~------~~~  252 (327)
T 1fvr_A          182 KIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------LYE  252 (327)
T ss_dssp             EECCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHH
T ss_pred             EEcccCcCccccc---cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH------HHH
Confidence            9999999874221   112233457889999999998899999999999999999998 999886543211      111


Q ss_pred             HHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhh
Q 047215          733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAW  795 (851)
Q Consensus       733 ~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w  795 (851)
                      .. ..         ......+..++..+.+++.+||+.||.+|||++|++++|+.+++....+
T Consensus       253 ~~-~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~  305 (327)
T 1fvr_A          253 KL-PQ---------GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY  305 (327)
T ss_dssp             HG-GG---------TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCS
T ss_pred             Hh-hc---------CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCc
Confidence            11 11         1112233455677999999999999999999999999999887654443

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.8e-39  Score=361.80  Aligned_cols=267  Identities=22%  Similarity=0.372  Sum_probs=193.9

Q ss_pred             HhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcC-CcceeeEEEEEccC--CcE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQ--NEM  584 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~--~~~  584 (851)
                      ..++|+..+.||+|+||.||+|.. ..++.||||++...  .......+.+|+.+++++. ||||+++++++...  ...
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            347899999999999999999986 46788999988643  4455677889999999997 99999999999644  478


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ++|||||+ |+|.+++...   .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus        87 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  159 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSF  159 (388)
T ss_dssp             EEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred             EEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence            99999998 6899888653   58899999999999999999996   89999999999999999999999999999753


Q ss_pred             CCC-------------------CccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcch
Q 047215          665 PSM-------------------EHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ  724 (851)
Q Consensus       665 ~~~-------------------~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~  724 (851)
                      ...                   ..........||+.|+|||++.+ ..++.++|||||||+++||++|+.||......++
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~  239 (388)
T 3oz6_A          160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ  239 (388)
T ss_dssp             SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            221                   01112344679999999999976 6799999999999999999999999976543332


Q ss_pred             hcHHHHHHHHhhhccccccc------------------CccCCC------------CCChhHHHHHHHHHHHhcccCCCC
Q 047215          725 INLADWAMKWQKQRSLKSII------------------DPHLKG------------NYSPESLEKFGEIAEKCLDDEGKN  774 (851)
Q Consensus       725 ~~l~~~~~~~~~~~~~~~i~------------------d~~l~~------------~~~~~~~~~l~~l~~~Cl~~dP~~  774 (851)
                      .....-.........+..+.                  ......            .....+++.+.+|+.+||+.||.+
T Consensus       240 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~  319 (388)
T 3oz6_A          240 LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK  319 (388)
T ss_dssp             HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGG
T ss_pred             HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCccc
Confidence            21110000000000000000                  000000            001134567899999999999999


Q ss_pred             CCCHHHHHHH
Q 047215          775 RPTMGEVLWH  784 (851)
Q Consensus       775 RPt~~evl~~  784 (851)
                      |||++|+++|
T Consensus       320 R~t~~e~l~H  329 (388)
T 3oz6_A          320 RISANDALKH  329 (388)
T ss_dssp             SCCHHHHTTS
T ss_pred             CCCHHHHhCC
Confidence            9999999999

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=1.7e-38  Score=343.48  Aligned_cols=258  Identities=27%  Similarity=0.422  Sum_probs=203.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCc----ceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEE-ccCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDC----TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~----~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~-~~~~~~~l  586 (851)
                      .+|+..++||+|+||.||+|+..+.    ..+++|.+... .....+.+.+|+.++++++||||++++++| ..++..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            5688889999999999999986432    35788887764 445567899999999999999999999996 45668899


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+++|+|.+++.... ..+++.++..++.|++.||+|||+   .+++||||||+|||++.++.+||+|||+++....
T Consensus       105 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~  180 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD  180 (298)
T ss_dssp             EEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred             EEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcccccccccc
Confidence            999999999999996543 467899999999999999999995   8999999999999999999999999999986433


Q ss_pred             CCc--cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcC-CCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          667 MEH--THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV-INPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       667 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p-~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      ...  ........+|+.|+|||.+.+..++.++||||||+++|||++|+.| +......+   ....   ... +     
T Consensus       181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~~---~~~-~-----  248 (298)
T 3f66_A          181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVY---LLQ-G-----  248 (298)
T ss_dssp             GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HHHH---HHT-T-----
T ss_pred             cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HHHH---Hhc-C-----
Confidence            221  1122345678899999999999999999999999999999996554 43332221   1111   100 0     


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                          .....+..++..+.+++.+||+.||.+|||++|+++.|+.+..
T Consensus       249 ----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  291 (298)
T 3f66_A          249 ----RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  291 (298)
T ss_dssp             ----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence                0111223445679999999999999999999999999998765

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.9e-39  Score=356.01  Aligned_cols=268  Identities=21%  Similarity=0.375  Sum_probs=200.7

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChh-hHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQ-GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++|...+.||+|+||.||+|+.. +++.+|+|++...... ....+.+|++++++++||||+++++++..++..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            57889999999999999999975 6788999988654322 122456799999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      ++ |+|.+++.... ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....  .
T Consensus        82 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~--~  154 (324)
T 3mtl_A           82 LD-KDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIP--T  154 (324)
T ss_dssp             CS-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred             cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCC--c
Confidence            98 58888876543 468899999999999999999995   89999999999999999999999999999753321  1


Q ss_pred             ccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh---ccccccc--
Q 047215          671 HVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ---RSLKSII--  744 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~~i~--  744 (851)
                      .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+..   .........   .....+.  
T Consensus       155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~  231 (324)
T 3mtl_A          155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL---HFIFRILGTPTEETWPGILSN  231 (324)
T ss_dssp             --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCCCCTTTSTTGGGC
T ss_pred             cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhCCCChHhchhhhcc
Confidence            22334568999999999876 57899999999999999999999999765433221   111111100   0000000  


Q ss_pred             -------CccCCC----CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          745 -------DPHLKG----NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       745 -------d~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                             .+....    ...+..+..+.+|+.+||+.||.+|||++|+++|         +|+...
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h---------p~f~~~  288 (324)
T 3mtl_A          232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH---------PFFLSL  288 (324)
T ss_dssp             HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS---------GGGGGG
T ss_pred             hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC---------hhhhhc
Confidence                   000000    0112345678999999999999999999999999         898753

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3e-38  Score=347.44  Aligned_cols=275  Identities=25%  Similarity=0.344  Sum_probs=204.5

Q ss_pred             CHHHHHHHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhc--CCcceeeEEEEEccC
Q 047215          504 TLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL--RHRHLVSLIGFCDEQ  581 (851)
Q Consensus       504 ~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l--~HpnIv~l~g~~~~~  581 (851)
                      +...-....++|+..+.||+|+||.||+|+.. +..+|||++....   ...+..|.+++..+  +||||+++++++...
T Consensus        28 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~  103 (337)
T 3mdy_A           28 PLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKG  103 (337)
T ss_dssp             CHHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred             CcccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence            33444445678999999999999999999876 7889999885432   23445566666554  899999999999776


Q ss_pred             ----CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCC-----CCCeEEcCCCCCCeEEcCCCe
Q 047215          582 ----NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA-----ERGIIHRDVKTTNILLDENFV  652 (851)
Q Consensus       582 ----~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~-----~~~iiHrDlk~~NILld~~~~  652 (851)
                          ...++||||+++|+|.+++...   .+++.++..++.|++.||+|||+..     +.+|+||||||+|||++.++.
T Consensus       104 ~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~  180 (337)
T 3mdy_A          104 TGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT  180 (337)
T ss_dssp             CGGGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred             CCCCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence                7899999999999999999553   5899999999999999999999510     129999999999999999999


Q ss_pred             EEEeeccccccCCCCCccc--cccccccCCcccCcccccccCCCch------HHHHHHHHHHHHHHhC----------Cc
Q 047215          653 AKMSDFGLSKTGPSMEHTH--VSTAVKGSFGYLDPEYFWRQQLTEK------SDVYSFGVVLFEVVCA----------RA  714 (851)
Q Consensus       653 ~kl~DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~k------sDVwS~GvvL~eLltG----------~~  714 (851)
                      +||+|||+++.........  ......||+.|+|||++.+...+.+      +|||||||++|||++|          +.
T Consensus       181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~  260 (337)
T 3mdy_A          181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL  260 (337)
T ss_dssp             EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred             EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence            9999999997543222111  1124579999999999987766654      9999999999999999          45


Q ss_pred             CCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC-CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          715 VINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN-YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       715 p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      |+....+... ..... .......    ...+.+... .+..++..+.+++.+||+.||.+|||+.|++++|+.+.+.
T Consensus       261 p~~~~~~~~~-~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          261 PYHDLVPSDP-SYEDM-REIVCIK----KLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             TTTTTSCSSC-CHHHH-HHHHTTS----CCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             cHhhhcCCCC-chhhh-HHHHhhh----ccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence            5544322221 11111 1111111    111111111 1236788899999999999999999999999999988754

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=5e-39  Score=352.82  Aligned_cols=263  Identities=25%  Similarity=0.364  Sum_probs=207.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~  584 (851)
                      .++|...+.||+|+||.||+|+..      .+..+|||++... .......+.+|+.++++++||||+++++++..++..
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            468999999999999999999842      4568999998754 445567899999999999999999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCCC-----CCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc---CCCeEEEe
Q 047215          585 ILVYEYMANGTLRSHLFGSDL-----PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMS  656 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~-----~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld---~~~~~kl~  656 (851)
                      ++||||+++|+|.+++.....     ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++   .+..+||+
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl~  185 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIG  185 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEEC
Confidence            999999999999999965432     458899999999999999999995   8999999999999998   45569999


Q ss_pred             eccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHh
Q 047215          657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQ  735 (851)
Q Consensus       657 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~  735 (851)
                      |||+++...............||+.|+|||.+.+..++.++||||||+++|||++ |+.||......+   ..+   .. 
T Consensus       186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~---~~-  258 (327)
T 2yfx_A          186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---VLE---FV-  258 (327)
T ss_dssp             CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---HHH---HH-
T ss_pred             ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH---HHH---HH-
Confidence            9999874322222222334567899999999999999999999999999999998 888886542211   111   11 


Q ss_pred             hhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhh
Q 047215          736 KQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE  793 (851)
Q Consensus       736 ~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~  793 (851)
                      ..+         .....+..++..+.+++.+||+.||.+|||+.+++++|+.+.+..+
T Consensus       259 ~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~  307 (327)
T 2yfx_A          259 TSG---------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD  307 (327)
T ss_dssp             HTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred             hcC---------CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence            111         0112234456679999999999999999999999999998876443

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1.9e-39  Score=372.07  Aligned_cols=255  Identities=24%  Similarity=0.321  Sum_probs=201.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      .++|+..++||+|+||.||+|+.. ++..+|||++...   .......+.+|+.++++++||||++++++|...+..++|
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            467999999999999999999864 5788999988643   334456778899999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+++|+|.+++...  ..+++.++..++.|++.||+|||+  +.+|+||||||+||||+.++.+||+|||+++.....
T Consensus       227 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  302 (446)
T 4ejn_A          227 MEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD  302 (446)
T ss_dssp             ECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred             EeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence            9999999999998543  368999999999999999999994  378999999999999999999999999999853321


Q ss_pred             CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                        .......+||+.|+|||++.+..++.++|||||||+||||++|+.||.......   +.   .....         ..
T Consensus       303 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~---~~i~~---------~~  365 (446)
T 4ejn_A          303 --GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---LF---ELILM---------EE  365 (446)
T ss_dssp             ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH---HHHHH---------CC
T ss_pred             --CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH---HH---HHHHh---------CC
Confidence              222345679999999999999999999999999999999999999997543211   11   11110         01


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHHHhhhhhccc
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~L~~~~~~~~~w~~~  798 (851)
                        ..++...+..+.+|+.+||+.||.+||     +++|+++|         +|+..
T Consensus       366 --~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h---------p~f~~  410 (446)
T 4ejn_A          366 --IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH---------RFFAG  410 (446)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS---------GGGTT
T ss_pred             --CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC---------ccccC
Confidence              123344556789999999999999999     99999999         88764

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=8.5e-39  Score=350.13  Aligned_cols=259  Identities=22%  Similarity=0.310  Sum_probs=210.0

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh------hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE------QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~------~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~  584 (851)
                      .++|+..+.||+|+||.||+|+.. ++..+|+|.+.....      ...+.+.+|+.++++++||||+++++++..++..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            357889999999999999999875 578899998765422      1357899999999999999999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC----eEEEeeccc
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF----VAKMSDFGL  660 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~----~~kl~DFGl  660 (851)
                      ++||||+++++|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++    .+||+|||+
T Consensus        91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~  165 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL  165 (321)
T ss_dssp             EEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred             EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence            9999999999999999653  468999999999999999999995   8999999999999999887    799999999


Q ss_pred             cccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc
Q 047215          661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL  740 (851)
Q Consensus       661 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  740 (851)
                      ++......   ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+      ........   
T Consensus       166 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~i~~~---  233 (321)
T 2a2a_A          166 AHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANITSV---  233 (321)
T ss_dssp             CEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTT---
T ss_pred             ceecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhc---
Confidence            97643321   2234568999999999999999999999999999999999999987543211      11111100   


Q ss_pred             ccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCC
Q 047215          741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDD  800 (851)
Q Consensus       741 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~  800 (851)
                      ....++.    .....+..+.+++.+||+.||.+|||++|+++|         +|+...+
T Consensus       234 ~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h---------p~~~~~~  280 (321)
T 2a2a_A          234 SYDFDEE----FFSHTSELAKDFIRKLLVKETRKRLTIQEALRH---------PWITPVD  280 (321)
T ss_dssp             CCCCCHH----HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS---------TTTSCSS
T ss_pred             ccccChh----hhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC---------ccccCCC
Confidence            0000111    112344668999999999999999999999999         8876543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=8.9e-39  Score=341.92  Aligned_cols=247  Identities=19%  Similarity=0.291  Sum_probs=204.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      .++|...+.||+|+||.||+|.... +..+|+|++........+.+.+|++++++++||||+++++++..++..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            4678999999999999999998754 567899988766555677899999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE---cCCCeEEEeeccccccCCCC
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl---d~~~~~kl~DFGla~~~~~~  667 (851)
                      +++++|.+++...  ..+++.++..++.|++.||.|||+   .+++||||||+|||+   +.++.+||+|||++......
T Consensus        88 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~  162 (277)
T 3f3z_A           88 CTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG  162 (277)
T ss_dssp             CCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred             cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence            9999999988543  358899999999999999999995   899999999999999   78899999999999764332


Q ss_pred             CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                      .   ......||+.|+|||.+.+. ++.++||||||+++|||++|+.||......+      ...... .+..       
T Consensus       163 ~---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~-~~~~-------  224 (277)
T 3f3z_A          163 K---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE------VMLKIR-EGTF-------  224 (277)
T ss_dssp             S---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHH-HCCC-------
T ss_pred             c---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH------HHHHHH-hCCC-------
Confidence            2   23345689999999998654 8999999999999999999999987543211      111111 1100       


Q ss_pred             CCCCCCh----hHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          748 LKGNYSP----ESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       748 l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                         ..+.    ..++.+.+++.+||+.||.+|||+.|+++|
T Consensus       225 ---~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h  262 (277)
T 3f3z_A          225 ---TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH  262 (277)
T ss_dssp             ---CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             ---CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence               1111    345678999999999999999999999999

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.4e-38  Score=376.25  Aligned_cols=257  Identities=23%  Similarity=0.370  Sum_probs=205.0

Q ss_pred             cCCceee-eeeeecceEEEEEEEc---CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          513 NNFDESL-MIGVGGFGKVFKGEIE---DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       513 ~~f~~~~-~LG~G~fG~Vykg~~~---~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      +++...+ .||+|+||.||+|.+.   ++..||||++... .....+.|.+|+++|++++|||||+++++|.. +..++|
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv  413 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV  413 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence            4444444 7999999999999874   4567999998765 33456889999999999999999999999976 569999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+++|+|.++|... ...+++.++..++.|++.||+|||+   ++|+||||||+||||+.++.+||+|||+++.....
T Consensus       414 ~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~  489 (613)
T 2ozo_A          414 MEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD  489 (613)
T ss_dssp             EECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred             EEeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence            9999999999999654 3568999999999999999999996   89999999999999999999999999999864332


Q ss_pred             Cc-cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          668 EH-THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       668 ~~-~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      .. ........+|+.|+|||++.+..++.++|||||||+||||++ |+.||......+   +...    ...+       
T Consensus       490 ~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~---~~~~----i~~~-------  555 (613)
T 2ozo_A          490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VMAF----IEQG-------  555 (613)
T ss_dssp             ------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH---HHHH----HHTT-------
T ss_pred             CceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHH----HHcC-------
Confidence            21 111223446789999999999999999999999999999998 999987654322   1111    1111       


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                        .....+..++..+.+|+.+||+.||.+||++.++++.|+.+..
T Consensus       556 --~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~  598 (613)
T 2ozo_A          556 --KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  598 (613)
T ss_dssp             --CCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             --CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence              1123445677889999999999999999999999999886643

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.4e-38  Score=357.20  Aligned_cols=271  Identities=21%  Similarity=0.289  Sum_probs=213.7

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC--cEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN--EMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~--~~~lV~  588 (851)
                      ++|...++||+|+||.||+|+... ++.+|||++.... ....+.+.+|++++++++||||+++++++...+  ..++||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            578889999999999999999754 7889999987543 334567889999999999999999999987654  789999


Q ss_pred             EecCCcchhhhccCCC-CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE----cCCCeEEEeecccccc
Q 047215          589 EYMANGTLRSHLFGSD-LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL----DENFVAKMSDFGLSKT  663 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~-~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl----d~~~~~kl~DFGla~~  663 (851)
                      ||+++|+|.+++.... ...+++.++..++.|++.||+|||+   .+|+||||||+|||+    +.++.+||+|||+++.
T Consensus        89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~  165 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (396)
T ss_dssp             CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred             ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence            9999999999996543 2348999999999999999999995   899999999999999    7888899999999986


Q ss_pred             CCCCCccccccccccCCcccCcccccc--------cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHh
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFWR--------QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ  735 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~  735 (851)
                      ....   .......||+.|+|||++.+        ..++.++|||||||++|||++|+.||.+.......  .+......
T Consensus       166 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~--~~~~~~~~  240 (396)
T 4eut_A          166 LEDD---EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN--KEVMYKII  240 (396)
T ss_dssp             CCCG---GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC--HHHHHHHH
T ss_pred             ccCC---CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch--HHHHHHHh
Confidence            4332   22334679999999999875        56788999999999999999999999754332211  11111111


Q ss_pred             hhc---ccccc---c--------CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          736 KQR---SLKSI---I--------DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       736 ~~~---~~~~i---~--------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      ...   ....+   .        +.......+......+.+++.+||+.||++|||+.|++++++.+++.
T Consensus       241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            111   00000   0        11112245577888999999999999999999999999999888653

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=9.9e-39  Score=341.73  Aligned_cols=254  Identities=22%  Similarity=0.384  Sum_probs=188.7

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|...+.||+|+||.||+|+. .+++.+|+|.+....   ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            5788999999999999999986 467889999886432   123467899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++++|.+++.... .++++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++.......
T Consensus        91 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~  166 (278)
T 3cok_A           91 EMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH  166 (278)
T ss_dssp             ECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred             ecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence            9999999999986542 468999999999999999999995   899999999999999999999999999987643221


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                      .  ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.........               ..+.... 
T Consensus       167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---------------~~~~~~~-  228 (278)
T 3cok_A          167 E--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL---------------NKVVLAD-  228 (278)
T ss_dssp             ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------------CCSSC-
T ss_pred             C--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH---------------HHHhhcc-
Confidence            1  123456899999999999999999999999999999999999998754332110               1111111 


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                       ...+...+..+.+++.+||+.||.+|||++++++|         +|+..
T Consensus       229 -~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h---------~~~~~  268 (278)
T 3cok_A          229 -YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH---------PFMSR  268 (278)
T ss_dssp             -CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS---------TTTC-
T ss_pred             -cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC---------ccccC
Confidence             12233455678999999999999999999999999         88764

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=5.6e-39  Score=352.97  Aligned_cols=271  Identities=20%  Similarity=0.301  Sum_probs=199.3

Q ss_pred             HhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCCh--hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSE--QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      ..++|...++||+|+||.||+|+. .+++.+|||++.....  .....+.+|++++++++||||+++++++..++..++|
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            346899999999999999999985 4678899999875432  3345678999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE-----cCCCeEEEeeccccc
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL-----DENFVAKMSDFGLSK  662 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl-----d~~~~~kl~DFGla~  662 (851)
                      |||++ |+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||+     +.++.+||+|||+++
T Consensus       112 ~e~~~-~~L~~~~~~~--~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~  185 (329)
T 3gbz_A          112 FEYAE-NDLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR  185 (329)
T ss_dssp             EECCS-EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred             EecCC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence            99998 5999998554  358999999999999999999996   899999999999999     456679999999997


Q ss_pred             cCCCCCccccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh--hcc
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK--QRS  739 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~--~~~  739 (851)
                      .....  ........||+.|+|||++.+. .++.++|||||||++|||++|+.||......+..  .........  ...
T Consensus       186 ~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~  261 (329)
T 3gbz_A          186 AFGIP--IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQL--FKIFEVLGLPDDTT  261 (329)
T ss_dssp             HHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCCCCTTT
T ss_pred             ccCCc--ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHH--HHHHHHhCCCchhh
Confidence            53221  1123345689999999999874 5899999999999999999999999764332211  111111000  000


Q ss_pred             ccccc--------CccCCCC-----CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCC
Q 047215          740 LKSII--------DPHLKGN-----YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDD  800 (851)
Q Consensus       740 ~~~i~--------d~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~  800 (851)
                      .....        .+.....     .....+..+.+|+.+||+.||.+|||++|+++|         +|++..+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h---------p~f~~~~  326 (329)
T 3gbz_A          262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH---------PYFSHND  326 (329)
T ss_dssp             STTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS---------GGGSSSC
T ss_pred             hhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC---------cccCCCC
Confidence            00000        0000000     011245678999999999999999999999999         9987543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=9.4e-39  Score=343.71  Aligned_cols=255  Identities=25%  Similarity=0.371  Sum_probs=201.2

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++|...+.||+|+||.||+++.. ++..+|+|++... .....+.+.+|++++++++||||+++++++...+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            57888999999999999999874 5678899987654 334467899999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCC--CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE---cCCCeEEEeeccccccCC
Q 047215          591 MANGTLRSHLFGS--DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       591 ~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl---d~~~~~kl~DFGla~~~~  665 (851)
                      +++|+|.+.+...  ....+++.++..++.|++.||.|||+   .+|+||||||+|||+   +.++.+||+|||+++...
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            9999999988532  23568999999999999999999995   899999999999999   456889999999997643


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ..   .......||+.|+|||.+. ..++.++||||||+++|||++|+.||......+.      ...... .      .
T Consensus       179 ~~---~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~------~~~~~~-~------~  241 (285)
T 3is5_A          179 SD---EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV------QQKATY-K------E  241 (285)
T ss_dssp             -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHH-C------C
T ss_pred             Cc---ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH------Hhhhcc-C------C
Confidence            22   2234456899999999985 5789999999999999999999999875432111      111100 0      0


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcc
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMR  797 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~  797 (851)
                      +.... .....++.+.+++.+||+.||.+|||+.|+++|         +|++
T Consensus       242 ~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h---------p~f~  283 (285)
T 3is5_A          242 PNYAV-ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH---------EWFK  283 (285)
T ss_dssp             CCCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS---------GGGG
T ss_pred             ccccc-ccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC---------HHhh
Confidence            11110 011234568899999999999999999999999         8875

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=6.5e-39  Score=365.45  Aligned_cols=267  Identities=21%  Similarity=0.261  Sum_probs=207.7

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhc------CCcceeeEEEEEccCCcE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKL------RHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l------~HpnIv~l~g~~~~~~~~  584 (851)
                      ..+|+..++||+|+||.||+|... .++.||||++... ......+.+|+++++.+      .|+||+++++++...+..
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            467999999999999999999865 4788999998754 33456778899998887      577999999999999999


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe--EEEeeccccc
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV--AKMSDFGLSK  662 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~--~kl~DFGla~  662 (851)
                      ++||||+. ++|.+++.......+++..+..++.|++.||+|||+   .+|+||||||+||||+.++.  +||+|||+++
T Consensus       175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~  250 (429)
T 3kvw_A          175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSC  250 (429)
T ss_dssp             EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred             EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence            99999996 699999877666679999999999999999999996   89999999999999999887  9999999997


Q ss_pred             cCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHH-------h
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW-------Q  735 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~-------~  735 (851)
                      .....     .....||+.|+|||++.+..++.++|||||||+||||++|+.||......+...  ......       .
T Consensus       251 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~--~i~~~~~~p~~~~~  323 (429)
T 3kvw_A          251 YEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLA--CMIELLGMPSQKLL  323 (429)
T ss_dssp             ETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHHHCCCCHHHH
T ss_pred             ecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHHcCCCCHHHH
Confidence            53221     234578999999999999999999999999999999999999987654332211  111100       0


Q ss_pred             hh-cccccccCcc---------------------------C-----CC----CCChhHHHHHHHHHHHhcccCCCCCCCH
Q 047215          736 KQ-RSLKSIIDPH---------------------------L-----KG----NYSPESLEKFGEIAEKCLDDEGKNRPTM  778 (851)
Q Consensus       736 ~~-~~~~~i~d~~---------------------------l-----~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~  778 (851)
                      .. ......++..                           +     ..    .......+.+.+|+.+||+.||++|||+
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta  403 (429)
T 3kvw_A          324 DASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTP  403 (429)
T ss_dssp             HTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCH
Confidence            00 0000000000                           0     00    0011224668999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhhcccC
Q 047215          779 GEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       779 ~evl~~L~~~~~~~~~w~~~~  799 (851)
                      +|+|+|         +|++..
T Consensus       404 ~e~L~H---------pw~~~~  415 (429)
T 3kvw_A          404 GQALRH---------PWLRRR  415 (429)
T ss_dssp             HHHHTS---------TTTC--
T ss_pred             HHHhCC---------hhhccC
Confidence            999999         998754

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=1.2e-38  Score=350.69  Aligned_cols=272  Identities=23%  Similarity=0.380  Sum_probs=199.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHH--HHhcCCcceeeEEEEE-----ccCCcE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEM--LSKLRHRHLVSLIGFC-----DEQNEM  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~--l~~l~HpnIv~l~g~~-----~~~~~~  584 (851)
                      -++|+..+.||+|+||.||+|+. +++.+|||++.....   ..+..|.++  +..++||||+++++.+     ......
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            36889999999999999999986 567899999864432   334444444  4558999999999854     233467


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCC---------CeEEcCCCCCCeEEcCCCeEEE
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER---------GIIHRDVKTTNILLDENFVAKM  655 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~---------~iiHrDlk~~NILld~~~~~kl  655 (851)
                      ++||||+++|+|.+++....   .++.++.+++.|++.||.|||+   .         +|+||||||+|||++.++.+||
T Consensus        88 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL  161 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI  161 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred             EEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCcEEE
Confidence            89999999999999996543   5889999999999999999995   5         9999999999999999999999


Q ss_pred             eeccccccCCCCC------ccccccccccCCcccCcccccc-------cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCc
Q 047215          656 SDFGLSKTGPSME------HTHVSTAVKGSFGYLDPEYFWR-------QQLTEKSDVYSFGVVLFEVVCARAVINPTLPK  722 (851)
Q Consensus       656 ~DFGla~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~-------~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~  722 (851)
                      +|||+++......      .........||+.|+|||++.+       ..++.++|||||||++|||++|+.|+......
T Consensus       162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~  241 (336)
T 3g2f_A          162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV  241 (336)
T ss_dssp             CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred             eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence            9999997643211      1112234569999999999976       46778999999999999999998877553322


Q ss_pred             chhc--HH---------HHHHHHhhhcccccccCccCCCC--CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          723 DQIN--LA---------DWAMKWQKQRSLKSIIDPHLKGN--YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       723 ~~~~--l~---------~~~~~~~~~~~~~~i~d~~l~~~--~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                      ....  ..         +.........    ...+.+...  ....++..+.+|+.+||+.||.+|||++|+++.|+.++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll  317 (336)
T 3g2f_A          242 PEYQMAFQTEVGNHPTFEDMQVLVSRE----KQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM  317 (336)
T ss_dssp             CCCCCTTHHHHCSSCCHHHHHHHHTTS----CCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hHHHHhhhcccCCCchHHHHHhhhccc----ccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence            1110  00         0000000000    111111111  12346778999999999999999999999999988765


Q ss_pred             HhhhhhcccCC
Q 047215          790 QLHEAWMRTDD  800 (851)
Q Consensus       790 ~~~~~w~~~~~  800 (851)
                         ..|.+...
T Consensus       318 ---~~~~~~~~  325 (336)
T 3g2f_A          318 ---MIWERNKS  325 (336)
T ss_dssp             ---HCCCC---
T ss_pred             ---HHHHhccc
Confidence               46765433

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=9.6e-39  Score=344.49  Aligned_cols=259  Identities=24%  Similarity=0.333  Sum_probs=206.6

Q ss_pred             HhcCCceee-eeeeecceEEEEEEEc---CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcE
Q 047215          511 ATNNFDESL-MIGVGGFGKVFKGEIE---DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       511 ~t~~f~~~~-~LG~G~fG~Vykg~~~---~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~  584 (851)
                      ..++|...+ .||+|+||.||+|...   .+..+|||++....  ....+.+.+|++++++++||||+++++++ ..+..
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~   92 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW   92 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence            446777777 9999999999999653   35788999987542  33467899999999999999999999999 56778


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ++||||+++++|.+++...  ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++..
T Consensus        93 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  167 (291)
T 1xbb_A           93 MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL  167 (291)
T ss_dssp             EEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence            9999999999999999654  458899999999999999999995   89999999999999999999999999999764


Q ss_pred             CCCCcc-ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          665 PSMEHT-HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       665 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      ...... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+   ...    ....+    
T Consensus       168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~----~~~~~----  236 (291)
T 1xbb_A          168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VTA----MLEKG----  236 (291)
T ss_dssp             CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHH----HHHTT----
T ss_pred             ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHH----HHHcC----
Confidence            332221 12233456789999999998889999999999999999999 999887543221   111    11111    


Q ss_pred             ccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       743 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                           .....+..++..+.+++.+||+.||.+||++.++++.|+.+...
T Consensus       237 -----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  280 (291)
T 1xbb_A          237 -----ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  280 (291)
T ss_dssp             -----CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             -----CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence                 11123445667799999999999999999999999999877643

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=1.2e-38  Score=343.37  Aligned_cols=253  Identities=26%  Similarity=0.405  Sum_probs=201.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc----CCcEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE----QNEMI  585 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~----~~~~~  585 (851)
                      ..|...+.||+|+||.||+|... ++..+|+|.+...  .....+.+.+|+.++++++||||+++++++..    +...+
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            34677889999999999999874 5567888887643  45556789999999999999999999998854    45689


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCC--eEEcCCCCCCeEEc-CCCeEEEeeccccc
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG--IIHRDVKTTNILLD-ENFVAKMSDFGLSK  662 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~--iiHrDlk~~NILld-~~~~~kl~DFGla~  662 (851)
                      +||||+++|+|.+++...  ..+++..+..++.|++.||.|||+   .+  ++||||||+|||++ .++.+||+|||++.
T Consensus       106 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~  180 (290)
T 1t4h_A          106 LVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  180 (290)
T ss_dssp             EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             EEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence            999999999999999543  458899999999999999999995   66  99999999999997 88999999999997


Q ss_pred             cCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      .....    ......||+.|+|||.+. ..++.++||||||+++|||++|+.||........     ...... .+    
T Consensus       181 ~~~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-----~~~~~~-~~----  245 (290)
T 1t4h_A          181 LKRAS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-----IYRRVT-SG----  245 (290)
T ss_dssp             GCCTT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-----HHHHHT-TT----
T ss_pred             ccccc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH-----HHHHHh-cc----
Confidence            53322    223456899999999886 4699999999999999999999999875433211     111111 11    


Q ss_pred             ccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       743 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                          ......+...++.+.+++.+||+.||.+|||++|+++|         +|+++
T Consensus       246 ----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h---------~~f~~  288 (290)
T 1t4h_A          246 ----VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH---------AFFQE  288 (290)
T ss_dssp             ----CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS---------GGGC-
T ss_pred             ----CCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC---------ccccc
Confidence                00111122334568999999999999999999999999         88864

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=7.7e-39  Score=342.72  Aligned_cols=252  Identities=27%  Similarity=0.414  Sum_probs=200.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc-CCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE-QNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~-~~~~~lV~Ey  590 (851)
                      .++|+..+.||+|+||.||+|+.. +..+|+|.+....  ..+.+.+|++++++++||||+++++++.. ++..++||||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            467889999999999999999875 6788999987543  45678999999999999999999999754 4578999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++|+|.+++.......+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.....   
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~---  170 (278)
T 1byg_A           97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---  170 (278)
T ss_dssp             CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred             CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeecccccccccc---
Confidence            999999999965433347889999999999999999995   89999999999999999999999999998753321   


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                        .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+   ...   .. .         ....
T Consensus       171 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~---~~-~---------~~~~  232 (278)
T 1byg_A          171 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVP---RV-E---------KGYK  232 (278)
T ss_dssp             -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG---HHH---HH-T---------TTCC
T ss_pred             --ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH---HH-h---------cCCC
Confidence              123357889999999999999999999999999999998 888886543221   111   11 0         1111


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ...+..++..+.+++.+||+.||.+|||+.|+++.|+.+..
T Consensus       233 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~  273 (278)
T 1byg_A          233 MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  273 (278)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence            22344556779999999999999999999999999988754

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.5e-39  Score=353.98  Aligned_cols=269  Identities=24%  Similarity=0.399  Sum_probs=212.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-----cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC--cE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-----EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN--EM  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-----~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~--~~  584 (851)
                      .++|+..+.||+|+||.||++++     .++..+|+|++........+.+.+|++++++++||||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            35688899999999999999984     357889999998877777788999999999999999999999986544  78


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ++||||+++++|.+++.... ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~  195 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVL  195 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence            99999999999999996543 458999999999999999999995   89999999999999999999999999999865


Q ss_pred             CCCCcc-ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh------
Q 047215          665 PSMEHT-HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ------  737 (851)
Q Consensus       665 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~------  737 (851)
                      ...... .......++..|+|||.+.+..++.++||||||+++|||++|+.|+.....       ++.......      
T Consensus       196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~-------~~~~~~~~~~~~~~~  268 (326)
T 2w1i_A          196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA-------EFMRMIGNDKQGQMI  268 (326)
T ss_dssp             CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH-------HHHHHHCTTCCTHHH
T ss_pred             cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH-------HHHHhhccccchhhh
Confidence            432221 122334577889999999988999999999999999999999987653210       000000000      


Q ss_pred             -cccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          738 -RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       738 -~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                       ..+.+.+........+..++..+.+++.+||+.||.+|||+.|+++.|+.+.+.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~  323 (326)
T 2w1i_A          269 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ  323 (326)
T ss_dssp             HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence             000111111112223455667899999999999999999999999999987653

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.3e-38  Score=349.35  Aligned_cols=271  Identities=22%  Similarity=0.265  Sum_probs=202.7

Q ss_pred             HHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChh-----hHHHHHHHHHHHHhcCCcceeeEEEEEccCCc
Q 047215          510 VATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQ-----GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE  583 (851)
Q Consensus       510 ~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~-----~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~  583 (851)
                      ...++|+..+.||+|+||.||+|+.. +++.+|+|++......     ....+.+|++++++++||||+++++++...+.
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            34578999999999999999999975 5788999998753221     12467899999999999999999999999999


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .++||||+++ +|.+++.... ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus        87 ~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~  161 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKS  161 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred             eEEEEEcCCC-CHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence            9999999986 8888875543 468899999999999999999995   8999999999999999999999999999986


Q ss_pred             CCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      ....  ........||+.|+|||++.+ ..++.++|||||||++|||++|..|+......+.  +....... .......
T Consensus       162 ~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~--~~~i~~~~-~~~~~~~  236 (346)
T 1ua2_A          162 FGSP--NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ--LTRIFETL-GTPTEEQ  236 (346)
T ss_dssp             TTSC--CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHH-CCCCTTT
T ss_pred             ccCC--cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHc-CCCChhh
Confidence            4322  122344678999999999975 4589999999999999999999988876533221  11111111 0000000


Q ss_pred             cc------CccC---CCCC-----ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          743 II------DPHL---KGNY-----SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       743 i~------d~~l---~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      ..      +...   ....     ....+..+.+|+.+||+.||.+|||++|+++|         +|+...
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h---------~~f~~~  298 (346)
T 1ua2_A          237 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM---------KYFSNR  298 (346)
T ss_dssp             SSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS---------GGGTSS
T ss_pred             hhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC---------hhhhcC
Confidence            00      0000   0001     13345779999999999999999999999999         888654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1e-38  Score=367.25  Aligned_cols=262  Identities=22%  Similarity=0.260  Sum_probs=196.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC------C
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ------N  582 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~------~  582 (851)
                      .++|+..+.||+|+||.||+|... .++.||||++...  .....+.+.+|+.+|++++||||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            478999999999999999999864 5788999998754  445567789999999999999999999999544      4


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      ..+||||||+++ |.+.+..    .+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       141 ~~~lv~E~~~~~-l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~  212 (464)
T 3ttj_A          141 DVYLVMELMDAN-LCQVIQM----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  212 (464)
T ss_dssp             EEEEEEECCSEE-HHHHHTS----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred             eEEEEEeCCCCC-HHHHHhh----cCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence            679999999865 5555532    38899999999999999999996   899999999999999999999999999998


Q ss_pred             cCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHH-----------
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA-----------  731 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~-----------  731 (851)
                      ....   ........||+.|+|||++.+..++.++|||||||+||||++|+.||.+....++.......           
T Consensus       213 ~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~  289 (464)
T 3ttj_A          213 TAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK  289 (464)
T ss_dssp             -------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred             ecCC---CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence            6432   22234567999999999999999999999999999999999999999765433221111000           


Q ss_pred             -----HHHhhhc-ccc-----cccCccCCCC---CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          732 -----MKWQKQR-SLK-----SIIDPHLKGN---YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       732 -----~~~~~~~-~~~-----~i~d~~l~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                           ..+.... ...     ..+...+...   ........+.+|+.+||+.||.+|||++|+++|
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                 0000000 000     0000000000   001125679999999999999999999999999

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=1.6e-38  Score=351.18  Aligned_cols=254  Identities=21%  Similarity=0.316  Sum_probs=203.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .++|+..+.||+|+||.||++... +++.+|+|++.....    ...+|++++.++ +||||+++++++..++..++|||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            467999999999999999999875 578899999865433    235688888888 79999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCC----CeEEEeeccccccCC
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN----FVAKMSDFGLSKTGP  665 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~----~~~kl~DFGla~~~~  665 (851)
                      |+++|+|.+++...  ..+++.++..++.|++.||+|||+   .+|+||||||+|||+.++    +.+||+|||+++...
T Consensus        97 ~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~  171 (342)
T 2qr7_A           97 LMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR  171 (342)
T ss_dssp             CCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred             CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence            99999999998654  468999999999999999999995   899999999999998432    359999999998643


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ...  ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..........+   .... ..+.      
T Consensus       172 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~---~~~i-~~~~------  239 (342)
T 2qr7_A          172 AEN--GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEI---LARI-GSGK------  239 (342)
T ss_dssp             CTT--CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHH---HHHH-HHCC------
T ss_pred             CCC--CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHH---HHHH-ccCC------
Confidence            221  223456789999999999988899999999999999999999999975432221111   1111 1111      


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      ..+........+..+.+|+.+||+.||++|||+.|+++|.+
T Consensus       240 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~  280 (342)
T 2qr7_A          240 FSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPW  280 (342)
T ss_dssp             CCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred             cccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCe
Confidence            11112223445677999999999999999999999999933

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=2.2e-38  Score=343.87  Aligned_cols=256  Identities=24%  Similarity=0.384  Sum_probs=207.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      .++|...+.||+|+||.||+++.. +++.+|+|.+..........+.+|+.++++++||||+++++++..++..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            367889999999999999999875 6788999998766555556789999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE---cCCCeEEEeeccccccCCCC
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl---d~~~~~kl~DFGla~~~~~~  667 (851)
                      +++++|.+++...  ..+++.++..++.|++.||.|||+   .+++||||||+|||+   +.++.+||+|||+++.... 
T Consensus        88 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~-  161 (304)
T 2jam_A           88 VSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN-  161 (304)
T ss_dssp             CCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC-
T ss_pred             CCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC-
Confidence            9999999988543  358899999999999999999995   899999999999999   7889999999999875322 


Q ss_pred             CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                         .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......   +   ..... .+..      .
T Consensus       162 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~---~~~i~-~~~~------~  225 (304)
T 2jam_A          162 ---GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK---L---FEKIK-EGYY------E  225 (304)
T ss_dssp             ---BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH---H---HHHHH-HCCC------C
T ss_pred             ---CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH---H---HHHHH-cCCC------C
Confidence               12234568999999999999999999999999999999999999986543211   1   11111 1100      1


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      .........+..+.+++.+||+.||.+|||++|+++|         +|+..
T Consensus       226 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h---------~~~~~  267 (304)
T 2jam_A          226 FESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH---------PWIDG  267 (304)
T ss_dssp             CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS---------HHHHS
T ss_pred             CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC---------ccccC
Confidence            1112233456679999999999999999999999999         77764

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1.9e-38  Score=344.18  Aligned_cols=249  Identities=26%  Similarity=0.389  Sum_probs=206.3

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      +.|...+.||+|+||.||+|+.. +++.+|+|++.... ....+.+.+|+.++++++||||+++++++..++..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            56888999999999999999864 57889999886543 34567899999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++..   .++++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||++.......  
T Consensus       102 ~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~--  173 (303)
T 3a7i_A          102 LGGGSALDLLEP---GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--  173 (303)
T ss_dssp             CTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--
T ss_pred             CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCccc--
Confidence            999999999854   358999999999999999999995   899999999999999999999999999997643221  


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      .......||+.|+|||++.+..++.++||||||+++|||++|+.|+.......   .   .... ...     ..+.   
T Consensus       174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~---~~~~-~~~-----~~~~---  238 (303)
T 3a7i_A          174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK---V---LFLI-PKN-----NPPT---  238 (303)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---H---HHHH-HHS-----CCCC---
T ss_pred             cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH---H---HHHh-hcC-----CCCC---
Confidence            12234568999999999999999999999999999999999999986543211   1   1111 111     1111   


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL  785 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  785 (851)
                       .+...+..+.+++.+||+.||.+|||+.|+++|.
T Consensus       239 -~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~  272 (303)
T 3a7i_A          239 -LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK  272 (303)
T ss_dssp             -CCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred             -CccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence             2234456689999999999999999999999993

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=1.2e-38  Score=362.16  Aligned_cols=258  Identities=28%  Similarity=0.390  Sum_probs=196.5

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--------hhhHHHHHHHHHHHHhcCCcceeeEEEEEccC
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--------EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ  581 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--------~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~  581 (851)
                      ..++|...+.||+|+||.||+|... +++.+|||++....        ......+.+|+.+|++++||||+++++++.. 
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-  211 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-  211 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence            3578999999999999999999864 56889999875421        1222358899999999999999999999864 


Q ss_pred             CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCC---CeEEEeec
Q 047215          582 NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN---FVAKMSDF  658 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~---~~~kl~DF  658 (851)
                      +..++||||+++|+|.+++...  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.+   ..+||+||
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl~DF  286 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDF  286 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred             CceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEEeec
Confidence            4589999999999999998544  468999999999999999999995   899999999999999654   45999999


Q ss_pred             cccccCCCCCccccccccccCCcccCcccccc---cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHh
Q 047215          659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR---QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ  735 (851)
Q Consensus       659 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~  735 (851)
                      |+++....   ........||+.|+|||++.+   ..++.++|||||||++|||++|+.||........  +.+..    
T Consensus       287 G~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~~~i----  357 (419)
T 3i6u_A          287 GHSKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQI----  357 (419)
T ss_dssp             STTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--HHHHH----
T ss_pred             ccceecCC---CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--HHHHH----
Confidence            99986432   223345679999999999863   6788999999999999999999999975433221  11111    


Q ss_pred             hhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          736 KQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       736 ~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      ..+...  ..+.    .....+..+.+++.+||+.||.+|||++|+++|         +|+++
T Consensus       358 ~~~~~~--~~~~----~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h---------p~~~~  405 (419)
T 3i6u_A          358 TSGKYN--FIPE----VWAEVSEKALDLVKKLLVVDPKARFTTEEALRH---------PWLQD  405 (419)
T ss_dssp             HTTCCC--CCHH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS---------GGGCC
T ss_pred             hcCCCC--CCch----hhcccCHHHHHHHHHHccCChhHCcCHHHHhCC---------cccCC
Confidence            111000  0000    012345678999999999999999999999999         88864

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=9.7e-39  Score=355.55  Aligned_cols=276  Identities=21%  Similarity=0.259  Sum_probs=206.8

Q ss_pred             cCHHHHHHHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCC-----------hhhHHHHHHHHHHHHhcCCcce
Q 047215          503 FTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQS-----------EQGLAEFETEIEMLSKLRHRHL  571 (851)
Q Consensus       503 ~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~-----------~~~~~~~~~Ei~~l~~l~HpnI  571 (851)
                      ....++....++|...+.||+|+||.||+|...++..+|||++....           ....+.+.+|++++++++||||
T Consensus        12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   91 (362)
T 3pg1_A           12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI   91 (362)
T ss_dssp             HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence            34677888899999999999999999999998889999999875432           1223779999999999999999


Q ss_pred             eeEEEEE-----ccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeE
Q 047215          572 VSLIGFC-----DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL  646 (851)
Q Consensus       572 v~l~g~~-----~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NIL  646 (851)
                      +++++++     ......++||||++ |+|.+.+... ...+++.++..++.|++.||.|||+   .+|+||||||+|||
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl  166 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNIL  166 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEE
T ss_pred             cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEE
Confidence            9999998     33446899999998 6888887644 3468999999999999999999996   89999999999999


Q ss_pred             EcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchh
Q 047215          647 LDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI  725 (851)
Q Consensus       647 ld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~  725 (851)
                      ++.++.+||+|||+++.....   .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+..
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~  243 (362)
T 3pg1_A          167 LADNNDITICDFNLAREDTAD---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL  243 (362)
T ss_dssp             ECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             EcCCCCEEEEecCcccccccc---cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            999999999999999753221   22334568999999999876 67999999999999999999999999765432211


Q ss_pred             cHHHHHHHHhhhcc-----------cccccCccC-------CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          726 NLADWAMKWQKQRS-----------LKSIIDPHL-------KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       726 ~l~~~~~~~~~~~~-----------~~~i~d~~l-------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      .   ..........           ........+       .....+..++.+.+|+.+||+.||.+|||++|+++|   
T Consensus       244 ~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h---  317 (362)
T 3pg1_A          244 N---KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH---  317 (362)
T ss_dssp             H---HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS---
T ss_pred             H---HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC---
Confidence            1   1110000000           000000000       001123345678999999999999999999999999   


Q ss_pred             HHHhhhhhccc
Q 047215          788 VLQLHEAWMRT  798 (851)
Q Consensus       788 ~~~~~~~w~~~  798 (851)
                            +|++.
T Consensus       318 ------p~f~~  322 (362)
T 3pg1_A          318 ------PYFES  322 (362)
T ss_dssp             ------GGGTT
T ss_pred             ------chhhh
Confidence                  88764

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=5.9e-38  Score=346.00  Aligned_cols=275  Identities=24%  Similarity=0.353  Sum_probs=210.9

Q ss_pred             cCHHHHHHHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHh--cCCcceeeEEEEEcc
Q 047215          503 FTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSK--LRHRHLVSLIGFCDE  580 (851)
Q Consensus       503 ~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~--l~HpnIv~l~g~~~~  580 (851)
                      .++..-....++|...+.||+|+||.||+|+.. ++.+|||++...   ....+.+|++++..  ++||||+++++++..
T Consensus        32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~  107 (342)
T 1b6c_B           32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNK  107 (342)
T ss_dssp             SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred             CceeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence            344444455678999999999999999999974 788999998643   34567889999887  789999999999977


Q ss_pred             CC----cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCC-----CCCeEEcCCCCCCeEEcCCC
Q 047215          581 QN----EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA-----ERGIIHRDVKTTNILLDENF  651 (851)
Q Consensus       581 ~~----~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~-----~~~iiHrDlk~~NILld~~~  651 (851)
                      ..    ..++||||+++|+|.+++...   .+++.+++.++.|++.||.|||+..     +.+|+||||||+|||++.++
T Consensus       108 ~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~  184 (342)
T 1b6c_B          108 DNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG  184 (342)
T ss_dssp             CCSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTS
T ss_pred             cCCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCC
Confidence            65    899999999999999999653   5899999999999999999999311     38999999999999999999


Q ss_pred             eEEEeeccccccCCCCCcc--ccccccccCCcccCccccccc------CCCchHHHHHHHHHHHHHHhC----------C
Q 047215          652 VAKMSDFGLSKTGPSMEHT--HVSTAVKGSFGYLDPEYFWRQ------QLTEKSDVYSFGVVLFEVVCA----------R  713 (851)
Q Consensus       652 ~~kl~DFGla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~t~ksDVwS~GvvL~eLltG----------~  713 (851)
                      .+||+|||+++........  .......||+.|+|||++.+.      .++.++|||||||++|||++|          +
T Consensus       185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~  264 (342)
T 1b6c_B          185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ  264 (342)
T ss_dssp             CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence            9999999999753322211  122345799999999999765      334789999999999999999          5


Q ss_pred             cCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC-CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          714 AVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN-YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       714 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      .||....+.. .....+......     ....+.+... .+.+++..+.+|+.+||+.||.+|||++|++++|+.+.+
T Consensus       265 ~p~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~  336 (342)
T 1b6c_B          265 LPYYDLVPSD-PSVEEMRKVVCE-----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  336 (342)
T ss_dssp             CTTTTTSCSS-CCHHHHHHHHTT-----SCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCccccCcCc-ccHHHHHHHHHH-----HHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence            6665433221 112222211111     1111211111 124677889999999999999999999999999998764

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=7.6e-39  Score=348.92  Aligned_cols=255  Identities=25%  Similarity=0.389  Sum_probs=197.4

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCc----
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE----  583 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~----  583 (851)
                      .++|+..+.||+|+||.||+|+. .+++.+|||++...   .......+.+|+.++++++||||+++++++.....    
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            36799999999999999999986 56788999998764   33445678999999999999999999999865543    


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .++||||+++|+|.+++...  .++++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~  165 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARA  165 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred             cEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence            49999999999999999643  368999999999999999999995   8999999999999999999999999999976


Q ss_pred             CCCCCc-cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          664 GPSMEH-THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       664 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      ...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....+..      ..........   
T Consensus       166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~~~---  236 (311)
T 3ork_A          166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS------VAYQHVREDP---  236 (311)
T ss_dssp             ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCCC---
T ss_pred             ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHhcCCC---
Confidence            433211 122234568999999999999999999999999999999999999987543221      1111111110   


Q ss_pred             ccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       743 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       ..+   .......+..+.+++.+||+.||.+||+..+++.+
T Consensus       237 -~~~---~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~  274 (311)
T 3ork_A          237 -IPP---SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA  274 (311)
T ss_dssp             -CCH---HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             -CCc---ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence             000   00112345678999999999999999999888887

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=6e-39  Score=349.87  Aligned_cols=263  Identities=24%  Similarity=0.373  Sum_probs=204.6

Q ss_pred             cccCHHHHHHHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcC--CcceeeEEE
Q 047215          501 KRFTLAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLR--HRHLVSLIG  576 (851)
Q Consensus       501 ~~~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~--HpnIv~l~g  576 (851)
                      ..+.+..+....++|...+.||+|+||.||++...+++.+|+|++...  .....+.+.+|+.++++++  ||||+++++
T Consensus        16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~   95 (313)
T 3cek_A           16 ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD   95 (313)
T ss_dssp             ----CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEE
T ss_pred             CCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEE
Confidence            344444455566789999999999999999999888889999987643  4455678999999999997  599999999


Q ss_pred             EEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEe
Q 047215          577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMS  656 (851)
Q Consensus       577 ~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~  656 (851)
                      ++..++..++||| +.+++|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||+++ +.+||+
T Consensus        96 ~~~~~~~~~lv~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~  168 (313)
T 3cek_A           96 YEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLI  168 (313)
T ss_dssp             EEECSSEEEEEEC-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEEC
T ss_pred             EeecCCEEEEEEe-cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEe
Confidence            9999999999999 6788999999654  368899999999999999999995   89999999999999964 899999


Q ss_pred             eccccccCCCCCccccccccccCCcccCcccccc-----------cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchh
Q 047215          657 DFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR-----------QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI  725 (851)
Q Consensus       657 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~  725 (851)
                      |||+++...............||+.|+|||.+.+           ..++.++||||||+++|||++|+.||.......  
T Consensus       169 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--  246 (313)
T 3cek_A          169 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--  246 (313)
T ss_dssp             CCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH--
T ss_pred             eccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH--
Confidence            9999986443322222344568999999999875           478999999999999999999999986543211  


Q ss_pred             cHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          726 NLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       726 ~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                         ...         ..+.++.....++...+..+.+++.+||+.||.+|||+.|+++|
T Consensus       247 ---~~~---------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          247 ---SKL---------HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             ---HHH---------HHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ---HHH---------HHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence               111         11222222233344445679999999999999999999999999

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=4.7e-39  Score=354.57  Aligned_cols=247  Identities=20%  Similarity=0.321  Sum_probs=205.7

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCCh--------hhHHHHHHHHHHHHhcCCcceeeEEEEEccCC
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSE--------QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN  582 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~  582 (851)
                      .++|...+.||+|+||.||+|+. .++..+|||++.....        .....+.+|+.++++++||||+++++++...+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            46899999999999999999985 4678899998765421        13345778999999999999999999999999


Q ss_pred             cEEEEEEecCCc-chhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccc
Q 047215          583 EMILVYEYMANG-TLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       583 ~~~lV~Ey~~~g-sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla  661 (851)
                      ..++||||+..| +|.+++...  ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a  177 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSA  177 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence            999999999877 999998654  368999999999999999999995   89999999999999999999999999999


Q ss_pred             ccCCCCCccccccccccCCcccCcccccccCC-CchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL  740 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  740 (851)
                      +.....   .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....                   
T Consensus       178 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------------------  235 (335)
T 3dls_A          178 AYLERG---KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE-------------------  235 (335)
T ss_dssp             EECCTT---CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-------------------
T ss_pred             eECCCC---CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-------------------
Confidence            864332   12334679999999999988876 8899999999999999999999864211                   


Q ss_pred             ccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       741 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                        ......  ..+...+..+.+|+.+||+.||.+|||++|+++|         +|+..
T Consensus       236 --~~~~~~--~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h---------p~~~~  280 (335)
T 3dls_A          236 --TVEAAI--HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD---------PWVTQ  280 (335)
T ss_dssp             --GTTTCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC---------TTTTC
T ss_pred             --HHhhcc--CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC---------ccccC
Confidence              001111  1122345668999999999999999999999999         88764

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=4e-39  Score=358.49  Aligned_cols=265  Identities=23%  Similarity=0.319  Sum_probs=205.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .++|+..+.||+|+||.||+|+.. ++..+|+|++... .....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            367999999999999999999875 5788999988765 44556789999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++|+|.+++...  ..+++..+..++.|++.||.|||+  ..+|+||||||+|||++.++.+||+|||+++...    
T Consensus       112 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~----  183 (360)
T 3eqc_A          112 HMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----  183 (360)
T ss_dssp             CCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH----
T ss_pred             CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH--hCCEEcCCccHHHEEECCCCCEEEEECCCCcccc----
Confidence            99999999999653  358899999999999999999995  3489999999999999999999999999986421    


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHH-------------------
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADW-------------------  730 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~-------------------  730 (851)
                      ........||+.|+|||++.+..++.++|||||||++|||++|+.||......+.......                   
T Consensus       184 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (360)
T 3eqc_A          184 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP  263 (360)
T ss_dssp             HHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred             cccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence            1122345789999999999999999999999999999999999999976432211000000                   


Q ss_pred             ----HHHHhhhc----ccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          731 ----AMKWQKQR----SLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       731 ----~~~~~~~~----~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                          ........    ....+.............+..+.+|+.+||+.||.+|||++|+++|
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  325 (360)
T 3eqc_A          264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  325 (360)
T ss_dssp             ----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             ccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence                00000000    0000000011111112345679999999999999999999999999

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=2.4e-38  Score=341.43  Aligned_cols=259  Identities=20%  Similarity=0.334  Sum_probs=204.9

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      ++|....+||+|+||.||+|+. .++..+|+|.+........+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  101 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV  101 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence            3455556899999999999986 456789999987766666788999999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCC-CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-CCeEEEeeccccccCCCCCc
Q 047215          592 ANGTLRSHLFGSD-LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-NFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       592 ~~gsL~~~L~~~~-~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-~~~~kl~DFGla~~~~~~~~  669 (851)
                      ++++|.+++.... ...+++..+..++.|++.||.|||+   .+++||||||+|||++. ++.+||+|||+++...... 
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-  177 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-  177 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCC-
Confidence            9999999986542 3456788899999999999999995   89999999999999987 8999999999997643221 


Q ss_pred             cccccccccCCcccCcccccccC--CCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQ--LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~--~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                       .......||+.|+|||++.+..  ++.++||||||+++|||++|+.||........ ..  +  .....         .
T Consensus       178 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~--~--~~~~~---------~  242 (295)
T 2clq_A          178 -PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA-AM--F--KVGMF---------K  242 (295)
T ss_dssp             ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH-HH--H--HHHHH---------C
T ss_pred             -CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH-HH--H--hhccc---------c
Confidence             1223456899999999997653  89999999999999999999999864322111 00  0  00000         1


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      .....+...+..+.+++.+||+.||++|||++|+++|         +|++..
T Consensus       243 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~---------~~~~~~  285 (295)
T 2clq_A          243 VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD---------EFLKVS  285 (295)
T ss_dssp             CCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS---------GGGCC-
T ss_pred             ccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC---------hhhhhc
Confidence            1122344556678999999999999999999999999         888643

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=4e-38  Score=341.61  Aligned_cols=251  Identities=22%  Similarity=0.305  Sum_probs=201.7

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC----hhhHHHHHHHHHHHHhcCCcceeeEEEEE--ccCCcEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS----EQGLAEFETEIEMLSKLRHRHLVSLIGFC--DEQNEMI  585 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~--~~~~~~~  585 (851)
                      ++|...+.||+|+||.||++... ++..+|+|++....    ......+.+|++++++++||||+++++++  ...+..+
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            68999999999999999999874 56789999886532    23457899999999999999999999998  5566899


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      +||||++++ |.+++.......+++.++..++.|++.||.|||+   ++++||||||+|||++.++.+||+|||++....
T Consensus        85 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~  160 (305)
T 2wtk_C           85 MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALH  160 (305)
T ss_dssp             EEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence            999999976 7677755555679999999999999999999995   899999999999999999999999999998654


Q ss_pred             CCCccccccccccCCcccCcccccccC--CCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQ--LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      ............||+.|+|||++.+..  ++.++||||||+++|||++|+.||......      +...... ...    
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~i~-~~~----  229 (305)
T 2wtk_C          161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY------KLFENIG-KGS----  229 (305)
T ss_dssp             TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHH-HCC----
T ss_pred             ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH------HHHHHHh-cCC----
Confidence            333333334566899999999997654  478999999999999999999998754221      1111111 110    


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                            ...+..++..+.+++.+||+.||.+|||++|+++|
T Consensus       230 ------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          230 ------YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             ------CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             ------CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                  12233455678999999999999999999999999

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=1.1e-38  Score=342.01  Aligned_cols=250  Identities=22%  Similarity=0.346  Sum_probs=202.4

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      .++|+..+.||+|+||.||+|+.. +++.+|+|++...  .......+.+|+..+.++ +||||+++++++..++..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            467899999999999999999875 6788999987753  334556788999999999 999999999999999999999


Q ss_pred             EEecCCcchhhhccCCC--CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC----------------
Q 047215          588 YEYMANGTLRSHLFGSD--LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE----------------  649 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~--~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~----------------  649 (851)
                      |||+++|+|.+++....  ...+++.++..++.|++.||.|||+   ++|+||||||+|||++.                
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~  166 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW  166 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC-----------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence            99999999999996432  2568999999999999999999995   89999999999999984                


Q ss_pred             ---CCeEEEeeccccccCCCCCccccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchh
Q 047215          650 ---NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI  725 (851)
Q Consensus       650 ---~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~  725 (851)
                         ...+||+|||++......      ....||+.|+|||.+.+. .++.++|||||||+++||++|++++....     
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----  235 (289)
T 1x8b_A          167 ASNKVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD-----  235 (289)
T ss_dssp             ---CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-----
T ss_pred             cCCceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-----
Confidence               447999999998764331      223589999999999766 66789999999999999999987653221     


Q ss_pred             cHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          726 NLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       726 ~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                         .+. .. ..+.         ....+..++..+.+++.+||+.||.+|||+.|+++|         +|+..
T Consensus       236 ---~~~-~~-~~~~---------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h---------~~~~~  285 (289)
T 1x8b_A          236 ---QWH-EI-RQGR---------LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH---------SVLLS  285 (289)
T ss_dssp             ---HHH-HH-HTTC---------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC---------TTC--
T ss_pred             ---HHH-HH-HcCC---------CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC---------hHhhh
Confidence               010 00 1111         112234455679999999999999999999999999         88764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=2.5e-38  Score=364.02  Aligned_cols=272  Identities=22%  Similarity=0.284  Sum_probs=190.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEc-----cCCc
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCD-----EQNE  583 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~-----~~~~  583 (851)
                      .++|+..++||+|+||.||+|+.. +++.||||++...  .....+.+.+|+++|++++||||+++++++.     ....
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            368999999999999999999864 6788999988653  4445678999999999999999999999993     3367


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      +++||||+. |+|.+++...  ..+++..+..++.||+.||+|||+   .+||||||||+||||+.++.+||+|||+++.
T Consensus       132 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  205 (458)
T 3rp9_A          132 LYVVLEIAD-SDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLART  205 (458)
T ss_dssp             EEEEECCCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred             EEEEEeccc-cchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchh
Confidence            999999985 7999988553  468999999999999999999996   8999999999999999999999999999986


Q ss_pred             CCCCCcc-------------------------ccccccccCCcccCcccc-cccCCCchHHHHHHHHHHHHHHh------
Q 047215          664 GPSMEHT-------------------------HVSTAVKGSFGYLDPEYF-WRQQLTEKSDVYSFGVVLFEVVC------  711 (851)
Q Consensus       664 ~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~t~ksDVwS~GvvL~eLlt------  711 (851)
                      .......                         ......+||+.|+|||++ ....++.++|||||||+||||++      
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~  285 (458)
T 3rp9_A          206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV  285 (458)
T ss_dssp             TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTC
T ss_pred             ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccc
Confidence            4321110                         123455789999999986 56679999999999999999999      


Q ss_pred             -----CCcCCCCCCCcch-----------------hcHHHHHHHHhhhcc--------------cccccCccCC---CCC
Q 047215          712 -----ARAVINPTLPKDQ-----------------INLADWAMKWQKQRS--------------LKSIIDPHLK---GNY  752 (851)
Q Consensus       712 -----G~~p~~~~~~~~~-----------------~~l~~~~~~~~~~~~--------------~~~i~d~~l~---~~~  752 (851)
                           |+++|.+......                 .+.............              ....+.....   ...
T Consensus       286 ~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (458)
T 3rp9_A          286 AYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAER  365 (458)
T ss_dssp             SSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGG
T ss_pred             cccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHH
Confidence                 4555543221000                 000000000000000              0000000000   011


Q ss_pred             ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       753 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      .+..+..+.+|+.+||+.||.+|||++|+|+|         +|++.
T Consensus       366 ~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H---------p~f~~  402 (458)
T 3rp9_A          366 FPASSADAIHLLKRMLVFNPNKRITINECLAH---------PFFKE  402 (458)
T ss_dssp             STTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS---------GGGTT
T ss_pred             CCCCCHHHHHHHHHHhccCccccCCHHHHhcC---------Hhhhh
Confidence            12345678999999999999999999999999         88764

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=9.8e-39  Score=342.54  Aligned_cols=251  Identities=21%  Similarity=0.313  Sum_probs=201.5

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh------hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE------QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~------~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      ++|+..+.||+|+||.||+|+.. +++.+|+|.+.....      ...+.+.+|+.++++++||||+++++++..++..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            56889999999999999999976 578899998764321      23678999999999999999999999999999999


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC----eEEEeecccc
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF----VAKMSDFGLS  661 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~----~~kl~DFGla  661 (851)
                      +||||+++++|.+++...  ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++    .+||+|||++
T Consensus        85 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~  159 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA  159 (283)
T ss_dssp             EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence            999999999999998543  468999999999999999999995   8999999999999998776    8999999999


Q ss_pred             ccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK  741 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  741 (851)
                      +......   ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+      .........   
T Consensus       160 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~---  227 (283)
T 3bhy_A          160 HKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE------TLTNISAVN---  227 (283)
T ss_dssp             EECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTC---
T ss_pred             eeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH------HHHHhHhcc---
Confidence            7643221   2234568999999999999999999999999999999999999987543211      111111000   


Q ss_pred             cccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          742 SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       742 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                          ...........+..+.+++.+||+.||.+|||+.|+++|
T Consensus       228 ----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  266 (283)
T 3bhy_A          228 ----YDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH  266 (283)
T ss_dssp             ----CCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred             ----cCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence                000000112345668999999999999999999999999

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-38  Score=353.75  Aligned_cols=260  Identities=23%  Similarity=0.311  Sum_probs=197.7

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC------C
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ------N  582 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~------~  582 (851)
                      .++|...+.||+|+||.||+|.. ..++.||||++...  .....+.+.+|+++|++++||||+++++++...      .
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46799999999999999999987 46788999998653  344456789999999999999999999999765      3


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      ..++||||+ +++|.+++..   ..+++.++..++.|+++||+|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~  176 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR  176 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             eEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence            469999999 7899999865   358899999999999999999996   899999999999999999999999999998


Q ss_pred             cCCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh----
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ----  737 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~----  737 (851)
                      .....     .....||+.|+|||++.+ ..++.++||||+||+++||++|+.||......++.............    
T Consensus       177 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~  251 (367)
T 1cm8_A          177 QADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ  251 (367)
T ss_dssp             ECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred             ccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence            64321     234568999999999887 68999999999999999999999999765433221111000000000    


Q ss_pred             -----------cccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          738 -----------RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       738 -----------~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                                 ..+.......+ ....+..+..+.+|+.+||+.||.+|||++|+++|
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          252 RLQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             TCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HhhhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence                       00000000001 11223456679999999999999999999999999

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=5.6e-39  Score=344.23  Aligned_cols=247  Identities=28%  Similarity=0.411  Sum_probs=203.4

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc----------
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE----------  580 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~----------  580 (851)
                      .++|+..+.||+|+||.||+|+.. +++.+|+|++....    ..+.+|++++++++||||+++++++..          
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   85 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK   85 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence            367899999999999999999975 67889999987654    346789999999999999999998854          


Q ss_pred             ------CCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEE
Q 047215          581 ------QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAK  654 (851)
Q Consensus       581 ------~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~k  654 (851)
                            ....++||||+++|+|.+++.......+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+|
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~k  162 (284)
T 2a19_B           86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVK  162 (284)
T ss_dssp             ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEE
T ss_pred             cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCCEE
Confidence                  4568999999999999999976555678999999999999999999995   8999999999999999999999


Q ss_pred             EeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHH
Q 047215          655 MSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW  734 (851)
Q Consensus       655 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~  734 (851)
                      |+|||+++......   ......||+.|+|||.+.+..++.++||||||+++|||++|..|+...        ..+... 
T Consensus       163 l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~~~~~-  230 (284)
T 2a19_B          163 IGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--------SKFFTD-  230 (284)
T ss_dssp             ECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HHHHHH-
T ss_pred             ECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HHHHHH-
Confidence            99999987643322   223456899999999999999999999999999999999998765311        111111 


Q ss_pred             hhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          735 QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       735 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                              +....+    +...+..+.+++.+||+.||.+|||+.|++++|+.+.
T Consensus       231 --------~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          231 --------LRDGII----SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             --------HHTTCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             --------hhcccc----cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence                    111111    2233456889999999999999999999999988653

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=3.6e-38  Score=366.92  Aligned_cols=255  Identities=25%  Similarity=0.387  Sum_probs=209.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      .++|...++||+|+||.||+++.. +++.+|+|++....   ......+.+|+++|++++||||+++++++...+.+++|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            367899999999999999999975 57899999986432   23456788999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCC--CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          588 YEYMANGTLRSHLFGSD--LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~--~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      |||+++|+|.+++....  ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence            99999999999986543  4568999999999999999999995   899999999999999999999999999998643


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ...  ......+||+.|+|||++.+..++.++|||||||++|||++|+.||........  ..+......         .
T Consensus       341 ~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~--~~~~~~~i~---------~  407 (543)
T 3c4z_A          341 AGQ--TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQRVL---------E  407 (543)
T ss_dssp             TTC--CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC--HHHHHHHHH---------H
T ss_pred             CCC--cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh--HHHHHHHHh---------h
Confidence            321  123345899999999999999999999999999999999999999976532211  111111111         1


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTM-----GEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~evl~~  784 (851)
                      ..  ..++...+..+.+|+.+||+.||.+||++     +++++|
T Consensus       408 ~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H  449 (543)
T 3c4z_A          408 QA--VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH  449 (543)
T ss_dssp             CC--CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred             cc--cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence            11  12334556778999999999999999964     889888

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=1.9e-38  Score=348.84  Aligned_cols=265  Identities=24%  Similarity=0.377  Sum_probs=202.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ++|+..+.||+|+||.||+|+.. +++.+|+|++...  .....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            67889999999999999999975 4788999987554  33345668899999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++++|.+++...  ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....  
T Consensus       105 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--  177 (331)
T 4aaa_A          105 FVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP--  177 (331)
T ss_dssp             CCSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred             cCCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCC--
Confidence            99999999887543  358999999999999999999995   89999999999999999999999999999754321  


Q ss_pred             cccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHH---------HHHHHhhhcc
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD---------WAMKWQKQRS  739 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~---------~~~~~~~~~~  739 (851)
                      ........||+.|+|||++.+. .++.++|||||||++|||++|+.||......+......         +...+.....
T Consensus       178 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (331)
T 4aaa_A          178 GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV  257 (331)
T ss_dssp             ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred             ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence            1223345689999999999875 78999999999999999999999987654322211100         0000111111


Q ss_pred             cccccCccCCCCC-----ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          740 LKSIIDPHLKGNY-----SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       740 ~~~i~d~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ......+.+....     .+.+++.+.+|+.+||+.||.+|||++|+++|
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  307 (331)
T 4aaa_A          258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH  307 (331)
T ss_dssp             GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            1111111111111     12456779999999999999999999999999

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=1.9e-38  Score=340.75  Aligned_cols=246  Identities=24%  Similarity=0.379  Sum_probs=204.4

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+|+.. ++..+|+|++....   ......+.+|++++++++||||+++++++...+..++||
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            67889999999999999999875 46788999875431   223467899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++...... 
T Consensus        94 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-  167 (284)
T 2vgo_A           94 EFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-  167 (284)
T ss_dssp             CCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred             EeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence            999999999998653  358899999999999999999994   89999999999999999999999999998753321 


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                         ......|++.|+|||.+.+..++.++||||||+++|||++|+.||......+      .....         .... 
T Consensus       168 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~---------~~~~-  228 (284)
T 2vgo_A          168 ---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------THRRI---------VNVD-  228 (284)
T ss_dssp             ---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHH---------HTTC-
T ss_pred             ---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH------HHHHH---------hccc-
Confidence               1234568999999999999999999999999999999999999986542211      11111         1111 


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       ..++...+..+.+++.+||+.||.+|||++|+++|
T Consensus       229 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          229 -LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             -CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred             -cCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence             12334455678999999999999999999999999

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=6.8e-38  Score=340.88  Aligned_cols=261  Identities=21%  Similarity=0.320  Sum_probs=200.1

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|...+.||+|+||.||+|.. .++..+|+|++...   .......+.+|+.++++++||||+++++++..++..++||
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            5789999999999999999986 46788999988653   3455678999999999999999999999999999999999


Q ss_pred             EecCCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          589 EYMANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       589 Ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||+++|+|.+++..  .....+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++....
T Consensus       112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~  188 (310)
T 2wqm_A          112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  188 (310)
T ss_dssp             ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred             ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence            99999999998853  223568899999999999999999995   8999999999999999999999999999876432


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      ..  .......|++.|+|||.+.+..++.++||||||+++|||++|+.||......    .......... .        
T Consensus       189 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~-~--------  253 (310)
T 2wqm_A          189 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKKIEQ-C--------  253 (310)
T ss_dssp             ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC----HHHHHHHHHT-T--------
T ss_pred             CC--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh----HHHHHHHhhc-c--------
Confidence            11  1223456899999999999999999999999999999999999998653221    1111111111 1        


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      ..........+..+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus       254 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~  298 (310)
T 2wqm_A          254 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC  298 (310)
T ss_dssp             CSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            111111234456799999999999999999999999999877643

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.4e-37  Score=335.51  Aligned_cols=265  Identities=17%  Similarity=0.232  Sum_probs=208.4

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEE-ccCCcEEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVYE  589 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~-~~~~~~~lV~E  589 (851)
                      .++|+..+.||+|+||.||+|+. .+++.+|+|++.....  ...+.+|+.++++++|++++..+.++ ..++..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            47899999999999999999996 5778999998765433  24688999999999988877766665 66678899999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE---cCCCeEEEeeccccccCCC
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl---d~~~~~kl~DFGla~~~~~  666 (851)
                      |+ +++|.+++.... ..+++.++..++.|++.||+|||+   ++|+||||||+|||+   +.++.+||+|||+++....
T Consensus        86 ~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  160 (296)
T 3uzp_A           86 LL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  160 (296)
T ss_dssp             CC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred             ec-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence            99 899999986332 468999999999999999999995   899999999999999   5889999999999976433


Q ss_pred             CCcc-----ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc
Q 047215          667 MEHT-----HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK  741 (851)
Q Consensus       667 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  741 (851)
                      ....     .......||+.|+|||.+.+..++.++|||||||++|||++|+.||........................ 
T Consensus       161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-  239 (296)
T 3uzp_A          161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-  239 (296)
T ss_dssp             TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-
T ss_pred             cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch-
Confidence            2211     1124567999999999999999999999999999999999999999865433322222221111111000 


Q ss_pred             cccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhh
Q 047215          742 SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH  792 (851)
Q Consensus       742 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  792 (851)
                          +.+    ...+++.+.+++.+||+.||.+|||++++++.|+.+....
T Consensus       240 ----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  282 (296)
T 3uzp_A          240 ----EVL----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             ----HHH----TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             ----HHH----HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence                011    1234466899999999999999999999999999876543

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=9.6e-38  Score=336.70  Aligned_cols=267  Identities=17%  Similarity=0.229  Sum_probs=205.9

Q ss_pred             HhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEE-ccCCcEEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC-DEQNEMILVY  588 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~-~~~~~~~lV~  588 (851)
                      ..++|+..+.||+|+||.||+|+. .+++.+|+|+......  ...+.+|+.++++++|++++..++++ ..++..++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            347899999999999999999986 5678899997654322  23578899999999988877777666 6677889999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE---cCCCeEEEeeccccccCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl---d~~~~~kl~DFGla~~~~  665 (851)
                      ||+ +++|.+++.... ..+++.++..++.|++.||+|||+   .+|+||||||+|||+   +.++.+||+|||+++...
T Consensus        85 e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~  159 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             ECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             Ecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence            999 999999986432 358999999999999999999995   899999999999999   789999999999998643


Q ss_pred             CCCcc-----ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc
Q 047215          666 SMEHT-----HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL  740 (851)
Q Consensus       666 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  740 (851)
                      .....     .......||+.|+|||.+.+..++.++|||||||++|||++|+.||........................
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  239 (296)
T 4hgt_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI  239 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred             CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence            32211     1223567999999999999999999999999999999999999999865443332222221111111000


Q ss_pred             ccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhh
Q 047215          741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE  793 (851)
Q Consensus       741 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~  793 (851)
                           +.+    ....++.+.+++.+||+.||++|||++++++.|+.+.+...
T Consensus       240 -----~~~----~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~  283 (296)
T 4hgt_A          240 -----EVL----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             -----HHH----TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             -----hhh----hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence                 001    12234579999999999999999999999999998876543

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=4.1e-38  Score=349.08  Aligned_cols=275  Identities=21%  Similarity=0.317  Sum_probs=205.1

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEcc--------C
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--------Q  581 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~--------~  581 (851)
                      ++|+..++||+|+||.||+|+. .+++.+|+|++....  ......+.+|++++++++||||+++++++..        .
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            6799999999999999999997 567899999876542  2334578899999999999999999999876        4


Q ss_pred             CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccc
Q 047215          582 NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla  661 (851)
                      +..++||||+++ +|.+.+.... ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||++
T Consensus        97 ~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  171 (351)
T 3mi9_A           97 GSIYLVFDFCEH-DLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLA  171 (351)
T ss_dssp             CEEEEEEECCSE-EHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             ceEEEEEeccCC-CHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence            568999999985 7777665433 458999999999999999999995   89999999999999999999999999999


Q ss_pred             ccCCCCC--ccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhc
Q 047215          662 KTGPSME--HTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR  738 (851)
Q Consensus       662 ~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~  738 (851)
                      +......  .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......................
T Consensus       172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  251 (351)
T 3mi9_A          172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE  251 (351)
T ss_dssp             EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence            7643221  1122345678999999999876 468999999999999999999999987654332211111000000000


Q ss_pred             ccccc-----cCc-c-CCCC-CC-hh------HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCCC
Q 047215          739 SLKSI-----IDP-H-LKGN-YS-PE------SLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDR  801 (851)
Q Consensus       739 ~~~~i-----~d~-~-l~~~-~~-~~------~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~~  801 (851)
                      ....+     .+. . .... .. .+      ..+.+.+|+.+||+.||.+|||++|+++|         +|+.....
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h---------p~f~~~~~  320 (351)
T 3mi9_A          252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH---------DFFWSDPM  320 (351)
T ss_dssp             TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS---------GGGGSSSC
T ss_pred             hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC---------CCcCCCCC
Confidence            00000     000 0 0000 00 00      13558899999999999999999999999         99875433

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=2.3e-38  Score=345.54  Aligned_cols=260  Identities=25%  Similarity=0.333  Sum_probs=204.6

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEc----cCCcEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD----EQNEMIL  586 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~----~~~~~~l  586 (851)
                      .++|+..+.||+|+||.||+++. .+++.+|+|++........+.+.+|++++++++||||+++++++.    .....++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            46899999999999999999987 567899999987777777788999999999999999999999986    3457899


Q ss_pred             EEEecCCcchhhhccCC--CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          587 VYEYMANGTLRSHLFGS--DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ||||+++|+|.+++...  ....+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence            99999999999988542  34568999999999999999999996   89999999999999999999999999998753


Q ss_pred             CCCCccc-------cccccccCCcccCcccccccC---CCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHH
Q 047215          665 PSMEHTH-------VSTAVKGSFGYLDPEYFWRQQ---LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW  734 (851)
Q Consensus       665 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~  734 (851)
                      .......       ......||+.|+|||.+.+..   ++.++||||||+++|||++|+.||........ .....   .
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~---~  260 (317)
T 2buj_A          185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD-SVALA---V  260 (317)
T ss_dssp             CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS-CHHHH---H
T ss_pred             ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc-hhhHH---h
Confidence            2111100       112345799999999987543   78999999999999999999998853111000 01000   0


Q ss_pred             hhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          735 QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       735 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                                ............+..+.+++.+||+.||.+|||+++++++|+.+
T Consensus       261 ----------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~  304 (317)
T 2buj_A          261 ----------QNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL  304 (317)
T ss_dssp             ----------HCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             ----------hccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence                      00111112234556799999999999999999999999998754

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.1e-39  Score=351.09  Aligned_cols=261  Identities=27%  Similarity=0.403  Sum_probs=202.5

Q ss_pred             cCHHHHHHHhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEcc
Q 047215          503 FTLAEIRVATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDE  580 (851)
Q Consensus       503 ~~~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~  580 (851)
                      +.+.++....++|+..+.||+|+||.||+|+. .+++.+|+|++.... .....+.+|+.+++++ +||||+++++++..
T Consensus        14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK   92 (326)
T ss_dssp             --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred             ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence            34444555678999999999999999999997 467889999886543 3346789999999999 89999999999865


Q ss_pred             ------CCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEE
Q 047215          581 ------QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAK  654 (851)
Q Consensus       581 ------~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~k  654 (851)
                            .+..++||||+++|+|.+++.......+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+|
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~k  169 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVK  169 (326)
T ss_dssp             CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEE
T ss_pred             ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEE
Confidence                  5688999999999999999976555678999999999999999999995   8999999999999999999999


Q ss_pred             EeeccccccCCCCCccccccccccCCcccCccccc-----ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHH
Q 047215          655 MSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW-----RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD  729 (851)
Q Consensus       655 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~  729 (851)
                      |+|||++......  ........||+.|+|||++.     ...++.++|||||||++|||++|+.||........     
T Consensus       170 l~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----  242 (326)
T 2x7f_A          170 LVDFGVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-----  242 (326)
T ss_dssp             ECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-----
T ss_pred             EeeCcCceecCcC--ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH-----
Confidence            9999998764321  11223456899999999987     56789999999999999999999999865432211     


Q ss_pred             HHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          730 WAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       730 ~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       ..... ..     ..+.+   .+...+..+.+++.+||+.||.+|||++++++|
T Consensus       243 -~~~~~-~~-----~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  287 (326)
T 2x7f_A          243 -LFLIP-RN-----PAPRL---KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH  287 (326)
T ss_dssp             -HHHHH-HS-----CCCCC---SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             -HHHhh-cC-----ccccC---CccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence             11111 01     01111   123345678999999999999999999999999

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=1.2e-38  Score=343.06  Aligned_cols=253  Identities=21%  Similarity=0.272  Sum_probs=188.8

Q ss_pred             HhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCC-h-hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQS-E-QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~-~-~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      ..++|+..+.||+|+||.||+|+. .+++.+|+|++.... . ...+.+.++...++.++||||+++++++..++..++|
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv   84 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC   84 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence            347899999999999999999987 467889999987642 2 2233455555668888999999999999999999999


Q ss_pred             EEecCCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCC-CeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          588 YEYMANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAER-GIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~-~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      |||++ |+|.+++..  .....+++.++..++.|++.||.|||+   . +++||||||+|||++.++.+||+|||+++..
T Consensus        85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            99998 588777643  234568999999999999999999996   6 9999999999999999999999999999764


Q ss_pred             CCCCccccccccccCCcccCcccc----cccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc
Q 047215          665 PSMEHTHVSTAVKGSFGYLDPEYF----WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL  740 (851)
Q Consensus       665 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  740 (851)
                      ...   .......||+.|+|||.+    .+..++.++||||||+++|||++|+.||........ .+    ......   
T Consensus       161 ~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~----~~~~~~---  229 (290)
T 3fme_A          161 VDD---VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ-QL----KQVVEE---  229 (290)
T ss_dssp             ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH-HH----HHHHHS---
T ss_pred             ccc---ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH-HH----HHHhcc---
Confidence            322   122334689999999996    566799999999999999999999999875322111 11    111111   


Q ss_pred             ccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                            ..........+..+.+++.+||+.||.+|||+.|+++|
T Consensus       230 ------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h  267 (290)
T 3fme_A          230 ------PSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH  267 (290)
T ss_dssp             ------CCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             ------CCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence                  11111123445678999999999999999999999999

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=4.5e-38  Score=350.84  Aligned_cols=254  Identities=16%  Similarity=0.182  Sum_probs=205.4

Q ss_pred             HHhcCCceeeeeeeecceEEEEEE------EcCcceeEEeecCCCChhhHHHHHHHHHHHHhcC---CcceeeEEEEEcc
Q 047215          510 VATNNFDESLMIGVGGFGKVFKGE------IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR---HRHLVSLIGFCDE  580 (851)
Q Consensus       510 ~~t~~f~~~~~LG~G~fG~Vykg~------~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~~~  580 (851)
                      ...++|...++||+|+||.||+|.      ...++.+|+|++....   ..++..|++++++++   |+||+++++++..
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~  138 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF  138 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence            345789999999999999999994      4567889999987654   346778888888886   9999999999999


Q ss_pred             CCcEEEEEEecCCcchhhhccCC---CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC--------
Q 047215          581 QNEMILVYEYMANGTLRSHLFGS---DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE--------  649 (851)
Q Consensus       581 ~~~~~lV~Ey~~~gsL~~~L~~~---~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~--------  649 (851)
                      ++..+|||||+++|+|.+++...   ....+++.++..++.|++.||+|||+   .+||||||||+||||+.        
T Consensus       139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~  215 (365)
T 3e7e_A          139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDE  215 (365)
T ss_dssp             SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC---
T ss_pred             CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCcccc
Confidence            99999999999999999999531   34569999999999999999999995   89999999999999998        


Q ss_pred             ---CCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhc
Q 047215          650 ---NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQIN  726 (851)
Q Consensus       650 ---~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~  726 (851)
                         ++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||+||+.||.......   
T Consensus       216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---  292 (365)
T 3e7e_A          216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE---  292 (365)
T ss_dssp             ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE---
T ss_pred             ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc---
Confidence               89999999999975332223334456779999999999999999999999999999999999999885432211   


Q ss_pred             HHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHHHH
Q 047215          727 LADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR-PTMGEVLWHLEYVLQ  790 (851)
Q Consensus       727 l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Pt~~evl~~L~~~~~  790 (851)
                                     ......+.. .  ...+.+.+++..||+.+|.+| |+++++.+.|+.+++
T Consensus       293 ---------------~~~~~~~~~-~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~  339 (365)
T 3e7e_A          293 ---------------CKPEGLFRR-L--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ  339 (365)
T ss_dssp             ---------------EEECSCCTT-C--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred             ---------------eeechhccc-c--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence                           001111111 1  235668899999999999998 578888888776554

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=1.3e-38  Score=344.65  Aligned_cols=270  Identities=24%  Similarity=0.341  Sum_probs=191.7

Q ss_pred             HHhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          510 VATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       510 ~~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      ...++|+..+.||+|+||.||+|+. .++..+|||++.... ....+.+.+|+.++++++||||+++++++..++..++|
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV   91 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence            3457899999999999999999985 467889999886543 34456788999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccC------CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccc
Q 047215          588 YEYMANGTLRSHLFG------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~------~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla  661 (851)
                      |||+++++|.+++..      .....+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||++
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~  168 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVS  168 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence            999999999998853      124568999999999999999999995   89999999999999999999999999998


Q ss_pred             ccCCCCC---ccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh
Q 047215          662 KTGPSME---HTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ  737 (851)
Q Consensus       662 ~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~  737 (851)
                      +......   .........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||.........      .... .
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------~~~~-~  241 (303)
T 2vwi_A          169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL------MLTL-Q  241 (303)
T ss_dssp             HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH------HHHH-T
T ss_pred             heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHH------HHHh-c
Confidence            7543221   1112234568999999999876 57899999999999999999999998765433211      0000 1


Q ss_pred             cccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          738 RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       738 ~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      ...................+..+.+++.+||+.||.+|||+.|+++|         +|+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h---------~~~~~  293 (303)
T 2vwi_A          242 NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH---------KFFQK  293 (303)
T ss_dssp             SSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS---------TTC--
T ss_pred             cCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC---------hhhhc
Confidence            11111110001111223345678999999999999999999999999         88764

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1.1e-37  Score=350.89  Aligned_cols=263  Identities=22%  Similarity=0.251  Sum_probs=204.7

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcC--------CcceeeEEEEEc---
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR--------HRHLVSLIGFCD---  579 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~--------HpnIv~l~g~~~---  579 (851)
                      .++|+..++||+|+||.||+|+. .+++.+|||++... ....+.+.+|++++++++        ||||+++++++.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            37899999999999999999986 45788999998754 344577899999999995        888999999987   


Q ss_pred             -cCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCC-CeEEcCCCCCCeEEcCCC------
Q 047215          580 -EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER-GIIHRDVKTTNILLDENF------  651 (851)
Q Consensus       580 -~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~-~iiHrDlk~~NILld~~~------  651 (851)
                       .+...++||||+ +++|.+.+.......+++.++..++.|++.||+|||+   + +|+||||||+|||++.++      
T Consensus       115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~~~~~~  190 (397)
T 1wak_A          115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQYIRRL  190 (397)
T ss_dssp             TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred             CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccchhhhhh
Confidence             667899999999 5566666654444679999999999999999999996   6 999999999999998775      


Q ss_pred             -------------------------------------------eEEEeeccccccCCCCCccccccccccCCcccCcccc
Q 047215          652 -------------------------------------------VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF  688 (851)
Q Consensus       652 -------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~  688 (851)
                                                                 .+||+|||+++.....     .....||+.|+|||++
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~  265 (397)
T 1wak_A          191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVL  265 (397)
T ss_dssp             HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHH
T ss_pred             hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhh
Confidence                                                       8999999999764321     2345689999999999


Q ss_pred             cccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh-hccc-----------ccccCc----------
Q 047215          689 WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK-QRSL-----------KSIIDP----------  746 (851)
Q Consensus       689 ~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~-~~~~-----------~~i~d~----------  746 (851)
                      .+..++.++|||||||+||||++|+.||............+....... .+..           ......          
T Consensus       266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (397)
T 1wak_A          266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL  345 (397)
T ss_dssp             HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred             cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence            999999999999999999999999999986544322111111111100 0000           000000          


Q ss_pred             c---------CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          747 H---------LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       747 ~---------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .         -....+...+..+.+|+.+||+.||++|||++|+++|
T Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  392 (397)
T 1wak_A          346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH  392 (397)
T ss_dssp             CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred             CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence            0         0112456778889999999999999999999999999

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=3.8e-38  Score=346.19  Aligned_cols=258  Identities=21%  Similarity=0.289  Sum_probs=191.0

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcC-CcceeeEEEEE--------cc
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGFC--------DE  580 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~--------~~  580 (851)
                      ...+|+..++||+|+||.||+|+.. +++.+|+|++........+.+.+|+.+++++. ||||+++++++        ..
T Consensus        26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~  105 (337)
T 3ll6_A           26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG  105 (337)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred             cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence            4468899999999999999999964 67889999987777777788999999999996 99999999998        44


Q ss_pred             CCcEEEEEEecCCcchhhhccC-CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCC--eEEcCCCCCCeEEcCCCeEEEee
Q 047215          581 QNEMILVYEYMANGTLRSHLFG-SDLPPLTWKQRLDACIGAARGLHYLHTGAERG--IIHRDVKTTNILLDENFVAKMSD  657 (851)
Q Consensus       581 ~~~~~lV~Ey~~~gsL~~~L~~-~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~--iiHrDlk~~NILld~~~~~kl~D  657 (851)
                      ....++||||++ |+|.+++.. ....++++.+++.++.|++.||.|||+   .+  |+||||||+|||++.++.+||+|
T Consensus       106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~D  181 (337)
T 3ll6_A          106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCD  181 (337)
T ss_dssp             SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred             CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEec
Confidence            456899999996 799888754 223469999999999999999999995   77  99999999999999999999999


Q ss_pred             ccccccCCCCCccc----------cccccccCCcccCcccc---cccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcch
Q 047215          658 FGLSKTGPSMEHTH----------VSTAVKGSFGYLDPEYF---WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ  724 (851)
Q Consensus       658 FGla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~  724 (851)
                      ||+++.........          ......||+.|+|||++   .+..++.++|||||||++|||++|+.||....... 
T Consensus       182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-  260 (337)
T 3ll6_A          182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-  260 (337)
T ss_dssp             CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred             CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-
Confidence            99998643321110          11244689999999998   56788999999999999999999999986432211 


Q ss_pred             hcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          725 INLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       725 ~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                                        +.............+..+.+|+.+||+.||.+|||+.|++++|+.+...
T Consensus       261 ------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~  309 (337)
T 3ll6_A          261 ------------------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA  309 (337)
T ss_dssp             -----------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ------------------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence                              1111111111222334588999999999999999999999999877653

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.3e-38  Score=351.41  Aligned_cols=266  Identities=14%  Similarity=0.163  Sum_probs=208.0

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC---------cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceee---------
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED---------CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVS---------  573 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~---------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~---------  573 (851)
                      .++|...+.||+|+||.||+|+...         ++.+|+|.+...     ..+.+|++++++++||||++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            3689999999999999999998764         788999998654     35789999999999999998         


Q ss_pred             ------EEEEEcc-CCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeE
Q 047215          574 ------LIGFCDE-QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL  646 (851)
Q Consensus       574 ------l~g~~~~-~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NIL  646 (851)
                            +++++.. ++..++||||+ +++|.+++.......+++.+++.++.|++.||.|||+   .+|+||||||+|||
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl  191 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIF  191 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEE
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEE
Confidence                  6777765 77889999999 9999999976544679999999999999999999996   89999999999999


Q ss_pred             EcCCC--eEEEeeccccccCCCCCc-----cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCC
Q 047215          647 LDENF--VAKMSDFGLSKTGPSMEH-----THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPT  719 (851)
Q Consensus       647 ld~~~--~~kl~DFGla~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~  719 (851)
                      ++.++  .+||+|||+++.......     ........||+.|+|||++.+..++.++|||||||+||||++|+.||...
T Consensus       192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  271 (352)
T 2jii_A          192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC  271 (352)
T ss_dssp             EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence            99998  999999999976432111     11123457999999999999999999999999999999999999998765


Q ss_pred             CCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhh
Q 047215          720 LPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH  792 (851)
Q Consensus       720 ~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  792 (851)
                      .+.. ..+........  .....+.++...   ....+..+.+++.+||+.||.+|||++++++.|+.+.+..
T Consensus       272 ~~~~-~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~  338 (352)
T 2jii_A          272 LPNT-EDIMKQKQKFV--DKPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL  338 (352)
T ss_dssp             TTCH-HHHHHHHHHHH--HSCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             CcCH-HHHHHHHHhcc--CChhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence            3221 11111111111  111111111110   1233467999999999999999999999999999877543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=2.6e-39  Score=362.54  Aligned_cols=242  Identities=14%  Similarity=0.175  Sum_probs=192.4

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCC---CChhhHHHHHHHH---HHHHhcCCcceeeEE-------EE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANP---QSEQGLAEFETEI---EMLSKLRHRHLVSLI-------GF  577 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~---~~~~~~~~~~~Ei---~~l~~l~HpnIv~l~-------g~  577 (851)
                      .++|...+.||+|+||.||+|+. .+++.+|||++..   ......+.+.+|+   +++++++|||||+++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            46788899999999999999996 5688999999863   3445567899999   555566899999998       66


Q ss_pred             EccCC-----------------cEEEEEEecCCcchhhhccCCC-----CCCCchhhhHHHHHHHHHHHHHhhcCCCCCe
Q 047215          578 CDEQN-----------------EMILVYEYMANGTLRSHLFGSD-----LPPLTWKQRLDACIGAARGLHYLHTGAERGI  635 (851)
Q Consensus       578 ~~~~~-----------------~~~lV~Ey~~~gsL~~~L~~~~-----~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~i  635 (851)
                      +..++                 ..+|||||+ +|+|.+++....     ...+++..++.++.|++.||+|||+   .+|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence            65553                 389999999 689999986421     2235568889999999999999996   899


Q ss_pred             EEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCccccccc-----------CCCchHHHHHHHH
Q 047215          636 IHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ-----------QLTEKSDVYSFGV  704 (851)
Q Consensus       636 iHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~t~ksDVwS~Gv  704 (851)
                      +||||||+|||++.++.+||+|||+++....     ......| +.|+|||++.+.           .++.++|||||||
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~  301 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL  301 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence            9999999999999999999999999985221     2344567 999999999887           8999999999999


Q ss_pred             HHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          705 VLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       705 vL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +||||++|+.||........               ...+...      ...+++.+.+|+.+||+.||.+|||+.|+++|
T Consensus       302 il~elltg~~Pf~~~~~~~~---------------~~~~~~~------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  360 (377)
T 3byv_A          302 VIYWIWCADLPITKDAALGG---------------SEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET  360 (377)
T ss_dssp             HHHHHHHSSCCC------CC---------------SGGGGSS------CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred             HHHHHHHCCCCCcccccccc---------------hhhhhhh------ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence            99999999999865432211               1111110      12344668999999999999999999999999

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=1.6e-37  Score=354.47  Aligned_cols=199  Identities=25%  Similarity=0.337  Sum_probs=166.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC-----Cc
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ-----NE  583 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~-----~~  583 (851)
                      .++|...++||+|+||.||+|+.. .++.||||++...  .....+.+.+|+++|++++||||+++++++...     +.
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            468999999999999999999864 5678999998754  444567889999999999999999999999766     57


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .++||||++ |+|.+++...  ..+++.++..++.|+++||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~  178 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLART  178 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEEecCC-cCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence            999999987 5999998653  468999999999999999999996   8999999999999999999999999999986


Q ss_pred             CCCCCcc--------------------ccccccccCCcccCcccc-cccCCCchHHHHHHHHHHHHHHhCCcCC
Q 047215          664 GPSMEHT--------------------HVSTAVKGSFGYLDPEYF-WRQQLTEKSDVYSFGVVLFEVVCARAVI  716 (851)
Q Consensus       664 ~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~t~ksDVwS~GvvL~eLltG~~p~  716 (851)
                      .......                    .......||+.|+|||++ ....++.++|||||||++|||++|..|+
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence            4332111                    123556799999999986 5667999999999999999999854443

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=3.4e-38  Score=375.90  Aligned_cols=250  Identities=24%  Similarity=0.355  Sum_probs=200.2

Q ss_pred             eeeeeecceEEEEEEEc---CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIE---DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~---~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      ++||+|+||.||+|.+.   .++.+|||++...  .....+++.+|+++|++++|||||+++++|.. +..++|||||++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            47999999999999753   4567999998764  33446789999999999999999999999964 568999999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc-ccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH-THV  672 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~-~~~  672 (851)
                      |+|.++|...  ..+++.++..++.||+.||+|||+   ++||||||||+||||+.++.+||+|||+++....... ...
T Consensus       454 g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~  528 (635)
T 4fl3_A          454 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA  528 (635)
T ss_dssp             EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred             CCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence            9999999543  468999999999999999999995   8999999999999999999999999999986433221 122


Q ss_pred             ccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      .....+|+.|+|||++.+..++.++|||||||+||||++ |+.||......+   +.    .....         .....
T Consensus       529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~---~~----~~i~~---------~~~~~  592 (635)
T 4fl3_A          529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VT----AMLEK---------GERMG  592 (635)
T ss_dssp             ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HH----HHHHT---------TCCCC
T ss_pred             ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH----HHHHc---------CCCCC
Confidence            334457889999999999999999999999999999998 999987643321   11    11111         11223


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      .+..++..+.+|+.+||+.||++|||++++++.|+.+..
T Consensus       593 ~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~  631 (635)
T 4fl3_A          593 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  631 (635)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            445667789999999999999999999999999987653

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=4.9e-38  Score=339.35  Aligned_cols=248  Identities=22%  Similarity=0.334  Sum_probs=205.4

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|...+.||+|+||.||+++.. .++.+|+|.+...   .....+.+.+|+.++++++||||+++++++..++..++||
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   94 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL   94 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence            67888999999999999999976 4677899987543   3445678899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++++|.+++...  ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++......
T Consensus        95 e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  169 (294)
T 2rku_A           95 ELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG  169 (294)
T ss_dssp             ECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             ecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence            999999999988543  368999999999999999999995   899999999999999999999999999997643221


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                        .......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+      .......         .. 
T Consensus       170 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~---------~~-  231 (294)
T 2rku_A          170 --ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKK---------NE-  231 (294)
T ss_dssp             --CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHT---------TC-
T ss_pred             --cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHhh---------cc-
Confidence              12334568999999999999999999999999999999999999986543211      1111111         00 


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       ...+...+..+.+++.+||+.||++|||++|+++|
T Consensus       232 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          232 -YSIPKHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             -CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             -CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence             11233445678999999999999999999999999

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-38  Score=353.46  Aligned_cols=254  Identities=25%  Similarity=0.331  Sum_probs=204.7

Q ss_pred             hcCCceeeeeeeecceEEEEEEE----cCcceeEEeecCCCC----hhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCC
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI----EDCTLAAIKRANPQS----EQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQN  582 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~----~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~  582 (851)
                      .++|+..++||+|+||.||+++.    ..++.+|||++....    ....+.+.+|+++++++ +||||+++++++..++
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            36899999999999999999987    367899999886532    23345677899999999 6999999999999999


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      ..++||||+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~  207 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK  207 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             eEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence            999999999999999999653  358899999999999999999995   899999999999999999999999999997


Q ss_pred             cCCCCCccccccccccCCcccCcccccc--cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWR--QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL  740 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  740 (851)
                      ..... .........||+.|+|||++.+  ..++.++|||||||+||||++|+.||........  ...........   
T Consensus       208 ~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~---  281 (355)
T 1vzo_A          208 EFVAD-ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRILKS---  281 (355)
T ss_dssp             ECCGG-GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHHHC---
T ss_pred             ecccC-CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch--HHHHHHHHhcc---
Confidence            64321 2222344679999999999985  4578999999999999999999999975433221  11111111100   


Q ss_pred             ccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 047215          741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWH  784 (851)
Q Consensus       741 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  784 (851)
                              ...++...+..+.+|+.+||+.||.+||     |++|+++|
T Consensus       282 --------~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          282 --------EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             --------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             --------CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence                    1123445566789999999999999999     99999999

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=2.8e-38  Score=349.57  Aligned_cols=265  Identities=21%  Similarity=0.337  Sum_probs=210.6

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChh-----------------hHHHHHHHHHHHHhcCCcceeeE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQ-----------------GLAEFETEIEMLSKLRHRHLVSL  574 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~-----------------~~~~~~~Ei~~l~~l~HpnIv~l  574 (851)
                      .++|...+.||+|+||.||+|+. ++..+|+|++......                 ..+.+.+|+.++++++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            46899999999999999999998 8889999987643211                 11789999999999999999999


Q ss_pred             EEEEccCCcEEEEEEecCCcchhhh------ccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc
Q 047215          575 IGFCDEQNEMILVYEYMANGTLRSH------LFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD  648 (851)
Q Consensus       575 ~g~~~~~~~~~lV~Ey~~~gsL~~~------L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld  648 (851)
                      ++++...+..++||||+++|+|.++      +.......+++.++..++.|++.||.|||+  +.+++||||||+|||++
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~  186 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMD  186 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEEC
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEc
Confidence            9999999999999999999999999      655446789999999999999999999994  48999999999999999


Q ss_pred             CCCeEEEeeccccccCCCCCccccccccccCCcccCccccccc-CCCc-hHHHHHHHHHHHHHHhCCcCCCCCCCcchhc
Q 047215          649 ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ-QLTE-KSDVYSFGVVLFEVVCARAVINPTLPKDQIN  726 (851)
Q Consensus       649 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~-ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~  726 (851)
                      .++.+||+|||+++.....    ......||+.|+|||.+.+. .++. ++||||||+++|||++|+.||........  
T Consensus       187 ~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--  260 (348)
T 2pml_X          187 KNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE--  260 (348)
T ss_dssp             TTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH--
T ss_pred             CCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH--
Confidence            9999999999999764322    23456789999999999877 6666 99999999999999999999976543211  


Q ss_pred             HHHHHHHHhhhccccccc------CccC---CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcc
Q 047215          727 LADWAMKWQKQRSLKSII------DPHL---KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMR  797 (851)
Q Consensus       727 l~~~~~~~~~~~~~~~i~------d~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~  797 (851)
                      +   .... .........      .+..   ........+..+.+++.+||+.||.+|||++|+++|         +|+.
T Consensus       261 ~---~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h---------p~f~  327 (348)
T 2pml_X          261 L---FNNI-RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH---------EWLA  327 (348)
T ss_dssp             H---HHHH-TSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS---------GGGT
T ss_pred             H---HHHH-hccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC---------cccc
Confidence            1   1111 111110000      0000   000113456779999999999999999999999999         8886


Q ss_pred             c
Q 047215          798 T  798 (851)
Q Consensus       798 ~  798 (851)
                      .
T Consensus       328 ~  328 (348)
T 2pml_X          328 D  328 (348)
T ss_dssp             T
T ss_pred             C
Confidence            4

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=3.3e-38  Score=347.72  Aligned_cols=249  Identities=22%  Similarity=0.336  Sum_probs=206.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      .++|...+.||+|+||.||+++.. +++.+|+|++...   .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            367889999999999999999875 4678899987543   345567889999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+++++|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus       120 ~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  194 (335)
T 2owb_A          120 LELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD  194 (335)
T ss_dssp             ECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             EecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence            9999999999988543  468999999999999999999995   89999999999999999999999999999764322


Q ss_pred             CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                      .  .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+      .........       . 
T Consensus       195 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~-------~-  258 (335)
T 2owb_A          195 G--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKKNE-------Y-  258 (335)
T ss_dssp             T--CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTC-------C-
T ss_pred             c--ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH------HHHHHhcCC-------C-
Confidence            1  12344568999999999999999999999999999999999999986543211      111111110       1 


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                         ..+...+..+.+++.+||+.||.+|||++|+++|
T Consensus       259 ---~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          259 ---SIPKHINPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             ---CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             ---CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence               1223445668999999999999999999999999

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=7.8e-38  Score=343.79  Aligned_cols=268  Identities=18%  Similarity=0.282  Sum_probs=210.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEE--cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcc------eeeEEEEEccCCc
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI--EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRH------LVSLIGFCDEQNE  583 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~--~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~Hpn------Iv~l~g~~~~~~~  583 (851)
                      .++|+..+.||+|+||.||+|..  .++..+|||++... ....+.+.+|++++++++|++      ++++++++...+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            36899999999999999999986  35788999998754 344577899999999998765      9999999999999


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC--------------
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE--------------  649 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~--------------  649 (851)
                      .++||||+ +++|.+++......++++.++..++.|++.||+|||+   ++|+||||||+|||++.              
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~  167 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRD  167 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred             EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCccccc
Confidence            99999999 8899999977665678999999999999999999995   89999999999999987              


Q ss_pred             -----CCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcch
Q 047215          650 -----NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ  724 (851)
Q Consensus       650 -----~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~  724 (851)
                           ++.+||+|||+++.....     .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.
T Consensus       168 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  242 (339)
T 1z57_A          168 ERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH  242 (339)
T ss_dssp             EEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH
T ss_pred             cccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence                 678999999999763321     2345789999999999999999999999999999999999999976543322


Q ss_pred             hcHHHHHHH-----Hhhhccccc---------------------ccCccC-CCCCChhHHHHHHHHHHHhcccCCCCCCC
Q 047215          725 INLADWAMK-----WQKQRSLKS---------------------IIDPHL-KGNYSPESLEKFGEIAEKCLDDEGKNRPT  777 (851)
Q Consensus       725 ~~l~~~~~~-----~~~~~~~~~---------------------i~d~~l-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt  777 (851)
                      .........     +........                     ...+.. .......+++.+.+|+.+||+.||.+|||
T Consensus       243 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt  322 (339)
T 1z57_A          243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRIT  322 (339)
T ss_dssp             HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccC
Confidence            111111000     000000000                     000000 01123456788999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhhccc
Q 047215          778 MGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       778 ~~evl~~L~~~~~~~~~w~~~  798 (851)
                      +.|+++|         +|++.
T Consensus       323 ~~ell~h---------p~f~~  334 (339)
T 1z57_A          323 LREALKH---------PFFDL  334 (339)
T ss_dssp             HHHHTTS---------GGGGG
T ss_pred             HHHHhcC---------HHHHH
Confidence            9999999         88864

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=5.7e-38  Score=343.73  Aligned_cols=270  Identities=23%  Similarity=0.332  Sum_probs=208.5

Q ss_pred             HhcCCceeeeeeeecceEEEEEEE--cCcceeEEeecCCCC--hhhHHHHHHHHHHHHhc---CCcceeeEEEEEc----
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEI--EDCTLAAIKRANPQS--EQGLAEFETEIEMLSKL---RHRHLVSLIGFCD----  579 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~--~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l---~HpnIv~l~g~~~----  579 (851)
                      ..++|+..+.||+|+||.||+|+.  .++..+|+|++....  ......+.+|+.+++++   +||||++++++|.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            457899999999999999999997  467889999875432  22233566788777766   8999999999986    


Q ss_pred             -cCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeec
Q 047215          580 -EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF  658 (851)
Q Consensus       580 -~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DF  658 (851)
                       .....++||||++ |+|.+++.......+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+||
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~Df  164 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADF  164 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEecC
Confidence             5678899999998 699999876655669999999999999999999995   89999999999999999999999999


Q ss_pred             cccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh-
Q 047215          659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ-  737 (851)
Q Consensus       659 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~-  737 (851)
                      |+++....   ........||+.|+|||++.+..++.++|||||||++|||++|+.||........   .......... 
T Consensus       165 g~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~~  238 (326)
T 1blx_A          165 GLARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ---LGKILDVIGLP  238 (326)
T ss_dssp             CSCCCCCG---GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCC
T ss_pred             cccccccC---CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH---HHHHHHHcCCC
Confidence            99976332   2223456789999999999999999999999999999999999999876533221   1111111000 


Q ss_pred             --ccccc-------ccC---ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          738 --RSLKS-------IID---PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       738 --~~~~~-------i~d---~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                        .....       ...   ......+....+..+.+|+.+||+.||.+|||+.|+++|         +|++..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h---------p~~~~~  303 (326)
T 1blx_A          239 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH---------PYFQDL  303 (326)
T ss_dssp             CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS---------GGGTTC
T ss_pred             CcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC---------cccccc
Confidence              00000       000   000011223456778999999999999999999999999         888653

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=1.3e-37  Score=341.63  Aligned_cols=263  Identities=19%  Similarity=0.265  Sum_probs=205.6

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcC-CcceeeEEEEEcc--CCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGFCDE--QNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~--~~~~~lV~  588 (851)
                      ++|+..++||+|+||.||+|+. .+++.+|+|++....   .+.+.+|++++++++ ||||+++++++..  ....++||
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            6799999999999999999986 567889999987543   457889999999997 9999999999977  67789999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC-eEEEeeccccccCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF-VAKMSDFGLSKTGPSM  667 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~-~~kl~DFGla~~~~~~  667 (851)
                      ||+++++|.+++.     .+++.++..++.|++.||+|||+   .+|+||||||+|||++.++ .+||+|||+++.....
T Consensus       113 e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~  184 (330)
T 3nsz_A          113 EHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG  184 (330)
T ss_dssp             ECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             eccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence            9999999999883     37889999999999999999995   8999999999999999766 8999999999764332


Q ss_pred             CccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh--------hc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK--------QR  738 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~--------~~  738 (851)
                      .   ......||..|+|||.+.+ ..++.++|||||||++|||++|+.||........ .+.........        ..
T Consensus       185 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~  260 (330)
T 3nsz_A          185 Q---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD-QLVRIAKVLGTEDLYDYIDKY  260 (330)
T ss_dssp             C---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH-HHHHHHHHHCHHHHHHHHHHT
T ss_pred             C---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHH-HHHHHHHhcCCchhhhHHHHh
Confidence            2   2234568999999999977 6799999999999999999999999865433211 11111110000        00


Q ss_pred             cc------ccc--------cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          739 SL------KSI--------IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       739 ~~------~~i--------~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      ..      ..+        .............+..+.+|+.+||+.||.+|||++|+++|         +|+..-
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h---------p~f~~~  326 (330)
T 3nsz_A          261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH---------PYFYTV  326 (330)
T ss_dssp             TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS---------GGGTTC
T ss_pred             ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC---------ccHhhh
Confidence            00      000        00011111223356789999999999999999999999999         998753

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=3.7e-38  Score=336.75  Aligned_cols=247  Identities=23%  Similarity=0.325  Sum_probs=196.2

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|...+.||+|+||.||+|+.. +++.+|+|.+....   ....+.+.+|+.++++++||||+++++++..++..++||
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM   90 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence            67889999999999999999975 67889999876432   233567899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++++|.+++...  ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||++...... 
T Consensus        91 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~-  164 (276)
T 2h6d_A           91 EYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-  164 (276)
T ss_dssp             ECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred             eccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCC-
Confidence            999999999998543  358899999999999999999995   89999999999999999999999999999764332 


Q ss_pred             ccccccccccCCcccCcccccccCC-CchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                        .......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||......      ....... .+.        
T Consensus       165 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~-~~~--------  227 (276)
T 2h6d_A          165 --EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP------TLFKKIR-GGV--------  227 (276)
T ss_dssp             --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHH-HCC--------
T ss_pred             --cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH------HHHHHhh-cCc--------
Confidence              12234568999999999987765 68999999999999999999998653211      1111111 110        


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                        ...+...+..+.+++.+||+.||.+|||++|+++|
T Consensus       228 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          228 --FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             --ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence              01223445678999999999999999999999999

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=2.2e-38  Score=339.02  Aligned_cols=252  Identities=24%  Similarity=0.369  Sum_probs=203.4

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEE--ccCCcEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFC--DEQNEMIL  586 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~--~~~~~~~l  586 (851)
                      .++|+..+.||+|+||.||+++.. +++.+|+|++...  .....+.+.+|+.++++++||||+++++++  ..++..++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            367889999999999999999875 6788999988654  345567899999999999999999999987  45678999


Q ss_pred             EEEecCCcchhhhccCC--CCCCCchhhhHHHHHHHHHHHHHhhcCCCCC-----eEEcCCCCCCeEEcCCCeEEEeecc
Q 047215          587 VYEYMANGTLRSHLFGS--DLPPLTWKQRLDACIGAARGLHYLHTGAERG-----IIHRDVKTTNILLDENFVAKMSDFG  659 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~-----iiHrDlk~~NILld~~~~~kl~DFG  659 (851)
                      ||||+++|+|.+++...  ....+++.+++.++.|++.||.|||+   .+     ++||||||+|||++.++.+||+|||
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg  161 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG  161 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence            99999999999998642  23458999999999999999999996   56     9999999999999999999999999


Q ss_pred             ccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcc
Q 047215          660 LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS  739 (851)
Q Consensus       660 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  739 (851)
                      +++.....  ........||+.|+|||.+.+..++.++||||||+++|||++|+.||......   .+.   ... ..+.
T Consensus       162 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~---~~i-~~~~  232 (279)
T 2w5a_A          162 LARILNHD--TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK---ELA---GKI-REGK  232 (279)
T ss_dssp             HHHHC-----CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHH---HHH-HHTC
T ss_pred             hheeeccc--cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH---HHH---HHH-hhcc
Confidence            99764322  11223456899999999999999999999999999999999999998754321   111   111 1111


Q ss_pred             cccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          740 LKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       740 ~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .         ...+...+..+.+++.+||+.||.+|||++|++++
T Consensus       233 ~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  268 (279)
T 2w5a_A          233 F---------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN  268 (279)
T ss_dssp             C---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             c---------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence            1         12233455679999999999999999999999998

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=1.7e-38  Score=351.47  Aligned_cols=264  Identities=16%  Similarity=0.142  Sum_probs=197.8

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc----CcceeEEeecCCCChh-----------hHHHHHHHHHHHHhcCCcceeeEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE----DCTLAAIKRANPQSEQ-----------GLAEFETEIEMLSKLRHRHLVSLIG  576 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~----~~~~vavK~~~~~~~~-----------~~~~~~~Ei~~l~~l~HpnIv~l~g  576 (851)
                      .++|...+.||+|+||.||+|+..    .+..+|+|+.......           ....+.+|+..++.++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            367999999999999999999975    5678899987755322           1234678889999999999999999


Q ss_pred             EEcc----CCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC-
Q 047215          577 FCDE----QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF-  651 (851)
Q Consensus       577 ~~~~----~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~-  651 (851)
                      ++..    +...++||||+ +++|.+++....  .+++.+++.++.|++.||+|||+   .+|+||||||+|||++.++ 
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~  189 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNP  189 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSST
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCCC
Confidence            9977    77899999999 999999996543  68999999999999999999996   8999999999999998877 


Q ss_pred             -eEEEeeccccccCCCCC-----ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchh
Q 047215          652 -VAKMSDFGLSKTGPSME-----HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI  725 (851)
Q Consensus       652 -~~kl~DFGla~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~  725 (851)
                       .+||+|||+++......     .........||+.|+|||++.+..++.++|||||||++|||++|+.||........ 
T Consensus       190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-  268 (345)
T 2v62_A          190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV-  268 (345)
T ss_dssp             TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH-
T ss_pred             CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH-
Confidence             99999999997643211     11112455799999999999999999999999999999999999999964322211 


Q ss_pred             cHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          726 NLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       726 ~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      .......... . ...........   ...++..+.+++.+||+.||.+|||++++++.|+.
T Consensus       269 ~~~~~~~~~~-~-~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~  325 (345)
T 2v62_A          269 AVQTAKTNLL-D-ELPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNP  325 (345)
T ss_dssp             HHHHHHHHHH-H-TTTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCT
T ss_pred             HHHHHHHhhc-c-cccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            1111111110 0 00000000000   11345679999999999999999999999999764

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1.5e-38  Score=355.37  Aligned_cols=249  Identities=24%  Similarity=0.332  Sum_probs=194.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHH-HHhcCCcceeeEEEEEccCCcEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEM-LSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~-l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .++|+..++||+|+||.||+|+.. ++..+|+|++....   ......+..|..+ ++.++||||+++++++...+..++
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            367999999999999999999975 46788999876542   2334456677776 567899999999999999999999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ||||+++|+|.+++...  ..+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus       117 v~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~  191 (373)
T 2r5t_A          117 VLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE  191 (373)
T ss_dssp             EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred             EEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence            99999999999998653  358889999999999999999995   8999999999999999999999999999975322


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      .  .......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+      .....         ...
T Consensus       192 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~------~~~~i---------~~~  254 (373)
T 2r5t_A          192 H--NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE------MYDNI---------LNK  254 (373)
T ss_dssp             C--CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH------HHHHH---------HHS
T ss_pred             C--CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH------HHHHH---------Hhc
Confidence            1  122345689999999999999999999999999999999999999997542211      11111         111


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCH----HHHHHH
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTM----GEVLWH  784 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~----~evl~~  784 (851)
                      .+  .+++..+..+.+|+.+||+.||.+||++    .++++|
T Consensus       255 ~~--~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h  294 (373)
T 2r5t_A          255 PL--QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH  294 (373)
T ss_dssp             CC--CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTS
T ss_pred             cc--CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCC
Confidence            11  1233455678999999999999999997    466666

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=4.7e-38  Score=350.80  Aligned_cols=256  Identities=23%  Similarity=0.312  Sum_probs=205.0

Q ss_pred             HHHHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh--------hhHHHHHHHHHHHHhc-CCcceeeEEEE
Q 047215          508 IRVATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE--------QGLAEFETEIEMLSKL-RHRHLVSLIGF  577 (851)
Q Consensus       508 l~~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l-~HpnIv~l~g~  577 (851)
                      .....++|+..+.||+|+||.||+|+.. +++.||||++.....        ...+.+.+|+.+++++ +||||++++++
T Consensus        89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  168 (365)
T 2y7j_A           89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS  168 (365)
T ss_dssp             HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence            3445578999999999999999999985 688999998765431        1245688999999999 79999999999


Q ss_pred             EccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEee
Q 047215          578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD  657 (851)
Q Consensus       578 ~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~D  657 (851)
                      +...+..++||||+++++|.+++...  ..+++..+..++.|++.||.|||+   .+++||||||+|||++.++.+||+|
T Consensus       169 ~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~D  243 (365)
T 2y7j_A          169 YESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSD  243 (365)
T ss_dssp             EEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECC
T ss_pred             EeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEe
Confidence            99999999999999999999998543  468999999999999999999995   8999999999999999999999999


Q ss_pred             ccccccCCCCCccccccccccCCcccCcccccc------cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHH
Q 047215          658 FGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR------QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWA  731 (851)
Q Consensus       658 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~  731 (851)
                      ||++.......   ......||+.|+|||++.+      ..++.++|||||||++|||++|+.||.......   ...  
T Consensus       244 fG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~---~~~--  315 (365)
T 2y7j_A          244 FGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL---MLR--  315 (365)
T ss_dssp             CTTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH--
T ss_pred             cCcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH---HHH--
Confidence            99987643322   2344679999999999864      358899999999999999999999986542211   111  


Q ss_pred             HHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          732 MKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       732 ~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       .. ..+... ...+.     ....+..+.+++.+||+.||.+|||++|+++|
T Consensus       316 -~i-~~~~~~-~~~~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          316 -MI-MEGQYQ-FSSPE-----WDDRSSTVKDLISRLLQVDPEARLTAEQALQH  360 (365)
T ss_dssp             -HH-HHTCCC-CCHHH-----HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             -HH-HhCCCC-CCCcc-----cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence             11 111000 00000     01234568999999999999999999999999

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=2.2e-38  Score=343.16  Aligned_cols=258  Identities=25%  Similarity=0.388  Sum_probs=204.6

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      .++|++.+.||+|+||.||+|+.. ++..+|+|.+........+.+.+|++++++++||||+++++++..++..++||||
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   97 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF   97 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence            468999999999999999999976 4788999998877666778899999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++++|.+++.... ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||++.....  ..
T Consensus        98 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--~~  171 (302)
T 2j7t_A           98 CPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK--TL  171 (302)
T ss_dssp             CTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH--HH
T ss_pred             CCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccccc--cc
Confidence            99999999885432 458999999999999999999995   8999999999999999999999999998753110  11


Q ss_pred             ccccccccCCcccCccccc-----ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          671 HVSTAVKGSFGYLDPEYFW-----RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      .......||+.|+|||++.     ...++.++||||||+++|||++|+.|+.......      ......... .     
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~-~-----  239 (302)
T 2j7t_A          172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR------VLLKIAKSD-P-----  239 (302)
T ss_dssp             HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSC-C-----
T ss_pred             cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH------HHHHHhccC-C-----
Confidence            1123356899999999984     6678999999999999999999999987543211      111111110 0     


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      +.  ...+...+..+.+++.+||+.||.+|||+.++++|         +|+..
T Consensus       240 ~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h---------~~~~~  281 (302)
T 2j7t_A          240 PT--LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH---------PFVSS  281 (302)
T ss_dssp             CC--CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS---------TTTTT
T ss_pred             cc--cCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC---------hHHhh
Confidence            00  11234455679999999999999999999999999         89864

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=2.3e-38  Score=354.02  Aligned_cols=254  Identities=13%  Similarity=0.061  Sum_probs=185.3

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHHHHHHHHHhc--CCcceeeEE-------EEEc
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFETEIEMLSKL--RHRHLVSLI-------GFCD  579 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l--~HpnIv~l~-------g~~~  579 (851)
                      .+|...+.||+|+||.||+|+.. +++.+|||++....   ....+.+.+|+.+++.|  +||||++++       +++.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            45888999999999999999964 67889999987753   24456678886555555  699988755       4443


Q ss_pred             cC-----------------CcEEEEEEecCCcchhhhccCCCCCCCchhhh------HHHHHHHHHHHHHhhcCCCCCeE
Q 047215          580 EQ-----------------NEMILVYEYMANGTLRSHLFGSDLPPLTWKQR------LDACIGAARGLHYLHTGAERGII  636 (851)
Q Consensus       580 ~~-----------------~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~------~~i~~~ia~gL~yLHs~~~~~ii  636 (851)
                      ..                 ...+|||||++ |+|.+++.... ..+.+..+      ..++.|++.||+|||+   ++|+
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~iv  216 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQS---KGLV  216 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTEE
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCCc
Confidence            22                 34899999999 89999996532 23455566      7888999999999995   8999


Q ss_pred             EcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccc--cCCCchHHHHHHHHHHHHHHhCCc
Q 047215          637 HRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR--QQLTEKSDVYSFGVVLFEVVCARA  714 (851)
Q Consensus       637 HrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~t~ksDVwS~GvvL~eLltG~~  714 (851)
                      ||||||+|||++.++.+||+|||+++....     ......+|+.|+|||++.+  ..++.++|||||||+||||++|+.
T Consensus       217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~  291 (371)
T 3q60_A          217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL  291 (371)
T ss_dssp             ETTCSGGGEEECTTSCEEECCGGGEEETTC-----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred             cCcCCHHHEEECCCCCEEEEecceeeecCC-----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999986422     1113456799999999987  789999999999999999999999


Q ss_pred             CCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          715 VINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       715 p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ||....+......        ............+.......++..+.+|+.+||+.||++|||+.|+++|
T Consensus       292 Pf~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  353 (371)
T 3q60_A          292 PFGLVTPGIKGSW--------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET  353 (371)
T ss_dssp             STTBCCTTCTTCC--------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred             CCCCcCcccccch--------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            9986543321100        0000000111111112223566789999999999999999999999999

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=2.9e-38  Score=366.00  Aligned_cols=251  Identities=22%  Similarity=0.324  Sum_probs=205.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      .++|+..++||+|+||.||+|+.. .++.+|||++...   .......+.+|+.++++++||||+++++++...+..++|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            467899999999999999999875 6788999987543   234567899999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE---cCCCeEEEeeccccccC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTG  664 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl---d~~~~~kl~DFGla~~~  664 (851)
                      |||+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||+   +.++.+||+|||+++..
T Consensus       105 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  179 (484)
T 3nyv_A          105 GEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF  179 (484)
T ss_dssp             ECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred             EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence            9999999999988654  468999999999999999999996   899999999999999   56789999999999764


Q ss_pred             CCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          665 PSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       665 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      ....   ......||+.|+|||++.+ .++.++|||||||++|||++|+.||......+   ..   ... ..+...   
T Consensus       180 ~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~---~~i-~~~~~~---  245 (484)
T 3nyv_A          180 EASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD---IL---KKV-EKGKYT---  245 (484)
T ss_dssp             CCCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH---HHH-HHCCCC---
T ss_pred             cccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH---HH---HHH-HcCCCC---
Confidence            3321   2344579999999999866 69999999999999999999999997643221   11   111 111100   


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                         .........++.+.+|+.+||+.||.+|||+.|+++|
T Consensus       246 ---~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          246 ---FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             ---CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ---CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence               0001113456779999999999999999999999999

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.8e-38  Score=354.94  Aligned_cols=263  Identities=21%  Similarity=0.266  Sum_probs=197.8

Q ss_pred             HHHhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc-------
Q 047215          509 RVATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE-------  580 (851)
Q Consensus       509 ~~~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~-------  580 (851)
                      ....++|...+.||+|+||.||+|+. .+++.+|||++......    ..+|++++++++||||+++++++..       
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            44568899999999999999999986 56789999988654322    2479999999999999999999833       


Q ss_pred             -------------------------------CCcEEEEEEecCCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHh
Q 047215          581 -------------------------------QNEMILVYEYMANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYL  627 (851)
Q Consensus       581 -------------------------------~~~~~lV~Ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yL  627 (851)
                                                     ....++||||++ |+|.+.+..  .....+++..+..++.|+++||+||
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  157 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI  157 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                           334889999998 587777643  2345689999999999999999999


Q ss_pred             hcCCCCCeEEcCCCCCCeEEc-CCCeEEEeeccccccCCCCCccccccccccCCcccCccccccc-CCCchHHHHHHHHH
Q 047215          628 HTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVV  705 (851)
Q Consensus       628 Hs~~~~~iiHrDlk~~NILld-~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~Gvv  705 (851)
                      |+   .+|+||||||+|||++ .++.+||+|||+++......   ......||+.|+|||.+.+. .++.++|||||||+
T Consensus       158 H~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  231 (383)
T 3eb0_A          158 HS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV  231 (383)
T ss_dssp             HT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             HH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence            94   8999999999999997 68999999999998643322   22345689999999998764 59999999999999


Q ss_pred             HHHHHhCCcCCCCCCCcchhcHHHHHHHHh--------h-hcccccccCccC-----CCCCChhHHHHHHHHHHHhcccC
Q 047215          706 LFEVVCARAVINPTLPKDQINLADWAMKWQ--------K-QRSLKSIIDPHL-----KGNYSPESLEKFGEIAEKCLDDE  771 (851)
Q Consensus       706 L~eLltG~~p~~~~~~~~~~~l~~~~~~~~--------~-~~~~~~i~d~~l-----~~~~~~~~~~~l~~l~~~Cl~~d  771 (851)
                      +|||++|+.||......++.  ........        . ........-+.+     ...++...+..+.+|+.+||+.|
T Consensus       232 l~ell~g~~pf~~~~~~~~~--~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  309 (383)
T 3eb0_A          232 FGELILGKPLFSGETSIDQL--VRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYE  309 (383)
T ss_dssp             HHHHHHSSCSSCCSSHHHHH--HHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred             HHHHHhCCCCCCCCChHHHH--HHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCC
Confidence            99999999999765433221  11111000        0 000001111111     11123345677999999999999


Q ss_pred             CCCCCCHHHHHHH
Q 047215          772 GKNRPTMGEVLWH  784 (851)
Q Consensus       772 P~~RPt~~evl~~  784 (851)
                      |.+|||+.|+++|
T Consensus       310 P~~R~t~~e~l~h  322 (383)
T 3eb0_A          310 PDLRINPYEAMAH  322 (383)
T ss_dssp             GGGSCCHHHHHTS
T ss_pred             hhhCCCHHHHhcC
Confidence            9999999999999

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=3e-38  Score=344.38  Aligned_cols=269  Identities=23%  Similarity=0.337  Sum_probs=201.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEc-----------
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD-----------  579 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~-----------  579 (851)
                      .++|...+.||+|+||.||+|.... ++.+|+|++........+.+.+|++++++++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            3678899999999999999999764 7889999988777777888999999999999999999999873           


Q ss_pred             ---cCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc-CCCeEEE
Q 047215          580 ---EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKM  655 (851)
Q Consensus       580 ---~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld-~~~~~kl  655 (851)
                         ..+..++||||++ |+|.+++..   .++++.++..++.|++.||+|||+   .+|+||||||+|||++ +++.+||
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl  162 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKI  162 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEE
T ss_pred             cccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEE
Confidence               4467899999998 699999854   358899999999999999999995   8999999999999997 6779999


Q ss_pred             eeccccccCCCCC-ccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHH
Q 047215          656 SDFGLSKTGPSME-HTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMK  733 (851)
Q Consensus       656 ~DFGla~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~  733 (851)
                      +|||+++...... .........+|..|+|||.+.+ ..++.++||||||+++|||++|+.||......+..   .....
T Consensus       163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~~  239 (320)
T 2i6l_A          163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQM---QLILE  239 (320)
T ss_dssp             CCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHH
T ss_pred             ccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHH---HHHHH
Confidence            9999998643211 1112234457999999998865 68999999999999999999999999765432211   11100


Q ss_pred             Hhh----------hcccc-----cccCccCC-CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcc
Q 047215          734 WQK----------QRSLK-----SIIDPHLK-GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMR  797 (851)
Q Consensus       734 ~~~----------~~~~~-----~i~d~~l~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~  797 (851)
                      ...          .....     ....+... ....+..+..+.+++.+||+.||.+|||++|+++|         +|++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h---------p~~~  310 (320)
T 2i6l_A          240 SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH---------PYMS  310 (320)
T ss_dssp             HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS---------HHHH
T ss_pred             hcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC---------cccc
Confidence            000          00000     00000000 00112345679999999999999999999999999         7776


Q ss_pred             cC
Q 047215          798 TD  799 (851)
Q Consensus       798 ~~  799 (851)
                      ..
T Consensus       311 ~~  312 (320)
T 2i6l_A          311 IY  312 (320)
T ss_dssp             TT
T ss_pred             cc
Confidence            43

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=4.1e-38  Score=338.89  Aligned_cols=258  Identities=23%  Similarity=0.338  Sum_probs=198.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC--c--ceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED--C--TLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~--~--~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~  584 (851)
                      .++|+..+.||+|+||.||+|++..  +  ..+|+|++...   .....+.+.+|++++++++||||+++++++..+. .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            3678899999999999999998642  2  25899988754   3345678999999999999999999999998765 8


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ++|+||+++|+|.+++.... ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++..
T Consensus        96 ~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  171 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL  171 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             eeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEccccccccc
Confidence            99999999999999986532 458899999999999999999995   89999999999999999999999999999865


Q ss_pred             CCCCcc-ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          665 PSMEHT-HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       665 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      ...... .......+|..|+|||.+.+..++.++||||||+++|||++ |+.||......      +........     
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~~~-----  240 (291)
T 1u46_A          172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------QILHKIDKE-----  240 (291)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTS-----
T ss_pred             cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH------HHHHHHHcc-----
Confidence            432221 12234557889999999998889999999999999999999 99888654321      111111111     


Q ss_pred             ccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       743 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                          ......+..++..+.+++.+||+.||.+|||+.+++++|+.+.
T Consensus       241 ----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          241 ----GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             ----CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             ----CCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence                1111223455677999999999999999999999999988653

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=6.1e-38  Score=363.46  Aligned_cols=251  Identities=23%  Similarity=0.323  Sum_probs=202.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      .++|++.++||+|+||.||+|+.. +++.+|||++...  .......+.+|++++++++||||+++++++...+..++||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            367999999999999999999875 6788999987542  2234577899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc---CCCeEEEeeccccccCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld---~~~~~kl~DFGla~~~~  665 (851)
                      ||+++|+|.+.+...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++   .++.+||+|||+++...
T Consensus       101 e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  175 (486)
T 3mwu_A          101 ELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (486)
T ss_dssp             CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred             EcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence            999999999988543  368999999999999999999995   8999999999999994   56689999999997543


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ..   .......||+.|+|||++.+ .++.++|||||||++|+|++|+.||......+   +   ..... .+..     
T Consensus       176 ~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~---~~~i~-~~~~-----  239 (486)
T 3mwu_A          176 QN---TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD---I---LKRVE-TGKY-----  239 (486)
T ss_dssp             CC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---H---HHHHH-HTCC-----
T ss_pred             CC---CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---H---HHHHH-hCCC-----
Confidence            22   22344579999999999875 59999999999999999999999997643221   1   11111 1110     


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       ..........+..+.+|+.+||+.||.+|||+.|+++|
T Consensus       240 -~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          240 -AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             -CSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             -CCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence             00001113455678999999999999999999999999

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=5.8e-38  Score=364.35  Aligned_cols=253  Identities=23%  Similarity=0.327  Sum_probs=199.7

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      .++|...+.||+|+||.||+|+.. .+..+|+|++....  ......+.+|+.++++++||||++++++|...+..++||
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  115 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM  115 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            357999999999999999999975 56788999876542  334577899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC---CCeEEEeeccccccCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE---NFVAKMSDFGLSKTGP  665 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~---~~~~kl~DFGla~~~~  665 (851)
                      ||+++|+|.+.+...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.   ++.+||+|||+++...
T Consensus       116 e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~  190 (494)
T 3lij_A          116 ECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE  190 (494)
T ss_dssp             ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred             ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence            999999999988543  458899999999999999999995   89999999999999975   4569999999997643


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ..   .......||+.|+|||++. ..++.++|||||||++|||++|+.||......+      ...... .+..  ..+
T Consensus       191 ~~---~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~-~~~~--~~~  257 (494)
T 3lij_A          191 NQ---KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE------ILRKVE-KGKY--TFD  257 (494)
T ss_dssp             TT---BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHH-HTCC--CCC
T ss_pred             CC---ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHH-hCCC--CCC
Confidence            22   2234567999999999986 569999999999999999999999997643321      111111 1110  001


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      ..    .....+..+.+|+.+||+.||.+|||+.|+++|.+
T Consensus       258 ~~----~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~  294 (494)
T 3lij_A          258 SP----EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPW  294 (494)
T ss_dssp             SG----GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred             ch----hcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcc
Confidence            11    11234567899999999999999999999999943

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.1e-37  Score=347.71  Aligned_cols=268  Identities=23%  Similarity=0.322  Sum_probs=206.6

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccC-----CcE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ-----NEM  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~-----~~~  584 (851)
                      .++|...+.||+|+||.||+|... ++..+|||++.... ......+.+|++++++++||||+++++++...     ...
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            468999999999999999999864 56789999987543 34457789999999999999999999999654     468


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ++||||++ |+|.+++...   .+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus       106 ~iv~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~  178 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA  178 (364)
T ss_dssp             EEEEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence            99999998 5999988543   48999999999999999999995   89999999999999999999999999999864


Q ss_pred             CCCCc-cccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcc---
Q 047215          665 PSMEH-THVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS---  739 (851)
Q Consensus       665 ~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~---  739 (851)
                      ..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+.....   ........   
T Consensus       179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i---~~~~~~~~~~~  255 (364)
T 3qyz_A          179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI---LGILGSPSQED  255 (364)
T ss_dssp             CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHH---HHHHCSCCHHH
T ss_pred             CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHH---HHHhCCCCHHH
Confidence            32211 112244579999999998754 45899999999999999999999999765544332111   11000000   


Q ss_pred             ------------cccccCccCC--CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          740 ------------LKSIIDPHLK--GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       740 ------------~~~i~d~~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                                  ......+...  ....+..+..+.+|+.+||+.||.+|||++|+++|         +|++.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h---------p~~~~  319 (364)
T 3qyz_A          256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH---------PYLEQ  319 (364)
T ss_dssp             HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS---------GGGTT
T ss_pred             HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC---------cchhh
Confidence                        0000000000  00112345678999999999999999999999999         88764

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=1e-37  Score=339.96  Aligned_cols=252  Identities=24%  Similarity=0.347  Sum_probs=201.2

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ..++|+..+.||+|+||.||+|... ++..+|+|.+....  ....+.+|+.++++++||||+++++++..++..++|||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            4578999999999999999999875 47889999887543  34678999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++++|.+++... ...+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++......  
T Consensus       105 ~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~--  178 (314)
T 3com_A          105 YCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT--  178 (314)
T ss_dssp             CCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT--
T ss_pred             cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh--
Confidence            99999999998532 2468999999999999999999995   89999999999999999999999999999764321  


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                      ........||+.|+|||.+.+..++.++||||||+++|||++|+.||........      ..... ..     ..+.+ 
T Consensus       179 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~-~~-----~~~~~-  245 (314)
T 3com_A          179 MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA------IFMIP-TN-----PPPTF-  245 (314)
T ss_dssp             BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHH-HS-----CCCCC-
T ss_pred             ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH------HHHHh-cC-----CCccc-
Confidence            1122345689999999999999999999999999999999999999875432111      11110 00     01111 


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       ..+...+..+.+++.+||+.||.+|||+.++++|
T Consensus       246 -~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~  279 (314)
T 3com_A          246 -RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH  279 (314)
T ss_dssp             -SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             -CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence             1223445679999999999999999999999999

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=2.6e-37  Score=345.50  Aligned_cols=262  Identities=21%  Similarity=0.285  Sum_probs=193.6

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC------
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN------  582 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~------  582 (851)
                      .++|...+.||+|+||.||+|... .++.+|||++...  .....+.+.+|+.++++++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            368999999999999999999864 5788999988653  3445577899999999999999999999997654      


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      ..++||||+++ +|.+.+..    .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       104 ~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~  175 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  175 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred             ceEEEEEcCCC-CHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence            78999999975 78887742    48899999999999999999995   899999999999999999999999999997


Q ss_pred             cCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHH---------HH---
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLA---------DW---  730 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~---------~~---  730 (851)
                      ....   ........||+.|+|||++.+..++.++|||||||++|||++|+.||......+.....         ++   
T Consensus       176 ~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  252 (371)
T 2xrw_A          176 TAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK  252 (371)
T ss_dssp             -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTT
T ss_pred             cccc---ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence            6332   11233457899999999999999999999999999999999999999765332111000         00   


Q ss_pred             ----HHHHhhhc-c-----cccccCccCCCC---CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          731 ----AMKWQKQR-S-----LKSIIDPHLKGN---YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       731 ----~~~~~~~~-~-----~~~i~d~~l~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                          ...+.... .     ............   .....+..+.+|+.+||+.||.+|||++|+++|
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence                00000000 0     000000000000   012236789999999999999999999999999

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=4.2e-38  Score=351.26  Aligned_cols=266  Identities=23%  Similarity=0.313  Sum_probs=189.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC------C
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ------N  582 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~------~  582 (851)
                      .++|...+.||+|+||.||+|.. .++..||||++...  .....+.+.+|++++++++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            47899999999999999999985 46788999998653  344567788999999999999999999998654      5


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      ..++|+|++ +++|.+++..   ..+++.++..++.|+++||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~  180 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR  180 (367)
T ss_dssp             CCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred             eEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence            689999999 6899998854   458999999999999999999996   899999999999999999999999999998


Q ss_pred             cCCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK  741 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  741 (851)
                      ....     ......||+.|+|||++.+ ..++.++|||||||+++||++|+.||......++.................
T Consensus       181 ~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~  255 (367)
T 2fst_X          181 HTAD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK  255 (367)
T ss_dssp             ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred             cccc-----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            6332     1234578999999999876 689999999999999999999999997654332221110000000000000


Q ss_pred             cc--------cC--ccCCC----CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          742 SI--------ID--PHLKG----NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       742 ~i--------~d--~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      .+        +.  +....    ...+..+..+.+|+.+||+.||.+|||++|+++|         +|+..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h---------p~~~~  317 (367)
T 2fst_X          256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH---------AYFAQ  317 (367)
T ss_dssp             TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS---------GGGTT
T ss_pred             HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC---------hhhhh
Confidence            00        00  00000    0012335678999999999999999999999999         88764

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1.1e-37  Score=341.29  Aligned_cols=257  Identities=28%  Similarity=0.388  Sum_probs=201.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC--------hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS--------EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN  582 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~--------~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~  582 (851)
                      .++|...+.||+|+||.||+|+.. +++.+|||.+....        ......+.+|++++++++||||+++++++..++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            467999999999999999999875 56789999876432        122345889999999999999999999997654


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCe---EEEeecc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFV---AKMSDFG  659 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~---~kl~DFG  659 (851)
                       .++||||+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.   +||+|||
T Consensus        89 -~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg  162 (322)
T 2ycf_A           89 -YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFG  162 (322)
T ss_dssp             -EEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred             -eEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence             89999999999999998543  468999999999999999999995   89999999999999986654   9999999


Q ss_pred             ccccCCCCCccccccccccCCcccCccccc---ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh
Q 047215          660 LSKTGPSMEHTHVSTAVKGSFGYLDPEYFW---RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK  736 (851)
Q Consensus       660 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~  736 (851)
                      +++....   ........||+.|+|||++.   ...++.++|||||||++|||++|+.||........  +.....    
T Consensus       163 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~----  233 (322)
T 2ycf_A          163 HSKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQIT----  233 (322)
T ss_dssp             TCEECCC---CHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--HHHHHH----
T ss_pred             cceeccc---ccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--HHHHHH----
Confidence            9986432   12233456899999999974   56789999999999999999999999975433221  111111    


Q ss_pred             hcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       737 ~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      .+...  ..+..    ....+..+.+++.+||+.||.+|||+.|+++|         +|++.
T Consensus       234 ~~~~~--~~~~~----~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h---------~~~~~  280 (322)
T 2ycf_A          234 SGKYN--FIPEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALRH---------PWLQD  280 (322)
T ss_dssp             HTCCC--CCHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS---------GGGCC
T ss_pred             hCccc--cCchh----hhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC---------cCcCC
Confidence            11100  00111    12345678999999999999999999999999         88764

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=2.4e-37  Score=334.33  Aligned_cols=257  Identities=21%  Similarity=0.283  Sum_probs=208.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC---------hhhHHHHHHHHHHHHhcC-CcceeeEEEEEcc
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---------EQGLAEFETEIEMLSKLR-HRHLVSLIGFCDE  580 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---------~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~  580 (851)
                      .++|+..+.||+|+||.||+|+.. +++.+|||++....         ....+.+.+|+++++++. ||||+++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            478999999999999999999975 57889999886542         123456889999999995 9999999999999


Q ss_pred             CCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccc
Q 047215          581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGL  660 (851)
Q Consensus       581 ~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGl  660 (851)
                      ++..++||||+++++|.+++...  ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~  170 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF  170 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             CCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccc
Confidence            99999999999999999998643  468999999999999999999995   8999999999999999999999999999


Q ss_pred             cccCCCCCccccccccccCCcccCccccc------ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHH
Q 047215          661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFW------RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW  734 (851)
Q Consensus       661 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~  734 (851)
                      +.......   ......|++.|+|||++.      ...++.++||||||+++|||++|+.||.......   .   ....
T Consensus       171 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~---~~~~  241 (298)
T 1phk_A          171 SCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML---M---LRMI  241 (298)
T ss_dssp             CEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---H---HHHH
T ss_pred             hhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH---H---HHHH
Confidence            87643221   223456899999999985      4568899999999999999999999986542211   1   1111


Q ss_pred             hhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          735 QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       735 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      . .+..      ..........+..+.+++.+||+.||.+|||+.|+++|         +|++.
T Consensus       242 ~-~~~~------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h---------~~~~~  289 (298)
T 1phk_A          242 M-SGNY------QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH---------PFFQQ  289 (298)
T ss_dssp             H-HTCC------CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS---------GGGCT
T ss_pred             h-cCCc------ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC---------hHhhh
Confidence            1 1110      01111123456779999999999999999999999999         88864

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=1.1e-37  Score=362.94  Aligned_cols=252  Identities=23%  Similarity=0.317  Sum_probs=201.0

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh-------------hhHHHHHHHHHHHHhcCCcceeeEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE-------------QGLAEFETEIEMLSKLRHRHLVSLIG  576 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~-------------~~~~~~~~Ei~~l~~l~HpnIv~l~g  576 (851)
                      ..++|...++||+|+||.||+|+.. .+..+|+|++.....             ...+.+.+|+.+|++++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            3578999999999999999999975 467899998765321             33567899999999999999999999


Q ss_pred             EEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC---eE
Q 047215          577 FCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF---VA  653 (851)
Q Consensus       577 ~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~---~~  653 (851)
                      ++..++..++||||+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++   .+
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~  188 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNI  188 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSE
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccE
Confidence            999999999999999999999988543  458999999999999999999996   8999999999999998765   69


Q ss_pred             EEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHH
Q 047215          654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMK  733 (851)
Q Consensus       654 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~  733 (851)
                      ||+|||+++.....   .......||+.|+|||++. ..++.++|||||||++|+|++|+.||......+.      ...
T Consensus       189 kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~------~~~  258 (504)
T 3q5i_A          189 KIVDFGLSSFFSKD---YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDI------IKK  258 (504)
T ss_dssp             EECCCTTCEECCTT---SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHH
T ss_pred             EEEECCCCEEcCCC---CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH------HHH
Confidence            99999999864332   1234457999999999986 5699999999999999999999999976432211      111


Q ss_pred             HhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          734 WQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       734 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .. .+...  .+..    .....+..+.+|+.+||+.||.+|||++|+++|
T Consensus       259 i~-~~~~~--~~~~----~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          259 VE-KGKYY--FDFN----DWKNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             HH-HCCCC--CCHH----HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HH-cCCCC--CCcc----ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            11 11100  0000    002345678999999999999999999999999

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=9.8e-38  Score=351.85  Aligned_cols=265  Identities=23%  Similarity=0.310  Sum_probs=198.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC------cEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN------EMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~------~~~l  586 (851)
                      .+|...++||+|+||.||+|+...+..+|+|++......    ..+|++++++++||||+++++++...+      ..++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            568899999999999999999877767888877544322    246999999999999999999985433      3789


Q ss_pred             EEEecCCcchhhhcc-CCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc-CCCeEEEeeccccccC
Q 047215          587 VYEYMANGTLRSHLF-GSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTG  664 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~-~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld-~~~~~kl~DFGla~~~  664 (851)
                      ||||++++.+..... ......+++..+..++.|+++||+|||+   .+|+||||||+|||++ .++.+||+|||+++..
T Consensus       116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~  192 (394)
T 4e7w_A          116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL  192 (394)
T ss_dssp             EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence            999998765544332 1223568899999999999999999996   8999999999999999 8999999999999864


Q ss_pred             CCCCccccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHh--------
Q 047215          665 PSMEHTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ--------  735 (851)
Q Consensus       665 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~--------  735 (851)
                      ....   ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......++.  ........        
T Consensus       193 ~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l--~~i~~~~g~p~~~~~~  267 (394)
T 4e7w_A          193 IAGE---PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQL--VEIIKVLGTPSREQIK  267 (394)
T ss_dssp             CTTC---CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCCCCHHHHH
T ss_pred             cCCC---CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHhCCCCHHHHH
Confidence            3222   12345689999999998764 5999999999999999999999999765433221  11111000        


Q ss_pred             h-hcccccccCccCC-----CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          736 K-QRSLKSIIDPHLK-----GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       736 ~-~~~~~~i~d~~l~-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      . ........-+...     ..++...+..+.+|+.+||+.||.+|||+.|+++|         +|++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h---------p~f~~  327 (394)
T 4e7w_A          268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH---------PFFDE  327 (394)
T ss_dssp             HHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS---------GGGST
T ss_pred             hhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC---------hhhhh
Confidence            0 0000000001110     01223356679999999999999999999999999         88764

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=3.7e-37  Score=345.71  Aligned_cols=268  Identities=23%  Similarity=0.262  Sum_probs=208.3

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcC-Cc-----ceeeEEEEEccCCc
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HR-----HLVSLIGFCDEQNE  583 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-Hp-----nIv~l~g~~~~~~~  583 (851)
                      ..++|...++||+|+||.||+|+.. +++.||||++... ......+..|+.+++.++ |+     +|+++++++...+.
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  130 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH  130 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence            4578999999999999999999865 5678999998753 344567788999998885 44     49999999999999


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc--CCCeEEEeecccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD--ENFVAKMSDFGLS  661 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld--~~~~~kl~DFGla  661 (851)
                      .++||||++ |+|.+++.......+++..+..++.|++.||.|||+ .+.+|+||||||+|||++  .++.+||+|||++
T Consensus       131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a  208 (382)
T 2vx3_A          131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSS  208 (382)
T ss_dssp             EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence            999999996 599999977665679999999999999999999994 247899999999999994  5788999999999


Q ss_pred             ccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh----
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ----  737 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~----  737 (851)
                      +.....     .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+...   ........    
T Consensus       209 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~---~i~~~~~~~~~~  280 (382)
T 2vx3_A          209 CQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMN---KIVEVLGIPPAH  280 (382)
T ss_dssp             EETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHHHCSCCHH
T ss_pred             eecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHhCCCCHH
Confidence            864321     234578999999999999999999999999999999999999998654332211   11110000    


Q ss_pred             -----c----ccccccCcc------------C-------------------------CCCCChhHHHHHHHHHHHhcccC
Q 047215          738 -----R----SLKSIIDPH------------L-------------------------KGNYSPESLEKFGEIAEKCLDDE  771 (851)
Q Consensus       738 -----~----~~~~i~d~~------------l-------------------------~~~~~~~~~~~l~~l~~~Cl~~d  771 (851)
                           .    .+..+.+..            .                         ...........+.+|+.+||+.|
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~d  360 (382)
T 2vx3_A          281 ILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYD  360 (382)
T ss_dssp             HHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSC
T ss_pred             HHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCC
Confidence                 0    000000000            0                         00011233467999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          772 GKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       772 P~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      |++|||++|+|+|         +|++.
T Consensus       361 P~~Rpta~e~L~h---------p~f~~  378 (382)
T 2vx3_A          361 PKTRIQPYYALQH---------SFFKK  378 (382)
T ss_dssp             TTTSCCHHHHTTS---------GGGCC
T ss_pred             hhhCCCHHHHhcC---------ccccc
Confidence            9999999999999         99864

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1.1e-37  Score=354.51  Aligned_cols=259  Identities=25%  Similarity=0.312  Sum_probs=194.7

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC------CcEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ------NEMI  585 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~------~~~~  585 (851)
                      .+|+..++||+|+||.||+|+.. .+..||||++.....    .+.+|+++|++++||||+++++++...      ..++
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            46888999999999999999975 578899998865422    234799999999999999999988432      2367


Q ss_pred             EEEEecCCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCC-CeEEEeeccccc
Q 047215          586 LVYEYMANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDEN-FVAKMSDFGLSK  662 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~-~~~kl~DFGla~  662 (851)
                      +||||+++ +|.+.+..  .....+++..+..++.|+++||.|||+   .+|+||||||+||||+.+ +.+||+|||+++
T Consensus       130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~  205 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK  205 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence            99999986 55555432  223568999999999999999999994   899999999999999954 678999999998


Q ss_pred             cCCCCCccccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHh------
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ------  735 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~------  735 (851)
                      ......   ......||+.|+|||++.+. .++.++|||||||+||||++|+.||......++  +.+......      
T Consensus       206 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~--l~~i~~~lg~p~~~~  280 (420)
T 1j1b_A          206 QLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ--LVEIIKVLGTPTREQ  280 (420)
T ss_dssp             ECCTTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCSCCHHH
T ss_pred             hcccCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHH
Confidence            643221   12345689999999999764 799999999999999999999999976543222  111111100      


Q ss_pred             --h-hcccccccCccCCC-----CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          736 --K-QRSLKSIIDPHLKG-----NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       736 --~-~~~~~~i~d~~l~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                        . .....+...+.+..     .+++..+..+.+|+.+||+.||.+|||+.|+++|
T Consensus       281 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             HHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence              0 00011111111111     0223445779999999999999999999999999

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=8.1e-37  Score=338.55  Aligned_cols=269  Identities=22%  Similarity=0.301  Sum_probs=205.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC-----CcE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ-----NEM  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~-----~~~  584 (851)
                      .++|...+.||+|+||.||+|+.. +++.+|||++... .......+.+|++++++++||||+++++++..+     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            478999999999999999999975 5788999998754 334456788999999999999999999998654     678


Q ss_pred             EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          585 ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ++||||++ |+|.+++..   ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus        90 ~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARII  162 (353)
T ss_dssp             EEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence            99999997 699998855   358999999999999999999995   89999999999999999999999999999764


Q ss_pred             CCCCccc--------cccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHh
Q 047215          665 PSMEHTH--------VSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ  735 (851)
Q Consensus       665 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~  735 (851)
                      .......        ......||+.|+|||++.. ..++.++|||||||++|||++|+.||..........   ......
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~  239 (353)
T 2b9h_A          163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL---LIFGII  239 (353)
T ss_dssp             C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH---HHHHHH
T ss_pred             ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH---HHHHHh
Confidence            3211110        1223568999999998764 789999999999999999999999987653222111   011100


Q ss_pred             hhcc----cc--------cccC--ccCCC----CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcc
Q 047215          736 KQRS----LK--------SIID--PHLKG----NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMR  797 (851)
Q Consensus       736 ~~~~----~~--------~i~d--~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~  797 (851)
                      ....    ..        +...  +....    ...+..+..+.+|+.+||+.||.+|||++|+++|         +|++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h---------p~~~  310 (353)
T 2b9h_A          240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH---------PYLQ  310 (353)
T ss_dssp             CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS---------GGGT
T ss_pred             CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC---------cccc
Confidence            0000    00        0000  00000    0112455678999999999999999999999999         8887


Q ss_pred             cC
Q 047215          798 TD  799 (851)
Q Consensus       798 ~~  799 (851)
                      ..
T Consensus       311 ~~  312 (353)
T 2b9h_A          311 TY  312 (353)
T ss_dssp             TT
T ss_pred             cc
Confidence            53

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.2e-37  Score=339.08  Aligned_cols=257  Identities=20%  Similarity=0.292  Sum_probs=198.4

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      -++|...+.||+|+||.||+|+.. +++.+|+|++...   .....+.+.+|+.++++++||||+++++++..++..++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            378999999999999999999875 6788999988654   233457799999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+++++|.+++...  .++++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++......
T Consensus       113 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  187 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDE  187 (309)
T ss_dssp             EECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred             EEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence            9999999999998643  368999999999999999999995   89999999999999999999999999998764332


Q ss_pred             CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                      . ........|++.|+|||.+.+..++.++||||||+++|||++|+.||......       ........ .   ...+ 
T Consensus       188 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~-~---~~~~-  254 (309)
T 2h34_A          188 K-LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-------VMGAHINQ-A---IPRP-  254 (309)
T ss_dssp             ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-------HHHHHHHS-C---CCCG-
T ss_pred             c-cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-------HHHHHhcc-C---CCCc-
Confidence            1 11223456899999999999999999999999999999999999998653211       01111110 0   0000 


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRP-TMGEVLWHLEYV  788 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~evl~~L~~~  788 (851)
                        ...++.++..+.+++.+||+.||++|| +++++++.|+.+
T Consensus       255 --~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~  294 (309)
T 2h34_A          255 --STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAA  294 (309)
T ss_dssp             --GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred             --cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHH
Confidence              112334556689999999999999999 999999987744

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=1.4e-37  Score=345.63  Aligned_cols=276  Identities=20%  Similarity=0.224  Sum_probs=195.4

Q ss_pred             HHHHHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCc--
Q 047215          507 EIRVATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE--  583 (851)
Q Consensus       507 ~l~~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~--  583 (851)
                      +.....++|...+.||+|+||.||+|+.. ++..+|||++.... .....+.+|++.++.++||||+++++++...+.  
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred             hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence            44556789999999999999999999974 57889999875542 223456788889999999999999999855433  


Q ss_pred             -----EEEEEEecCCcchhhhccC--CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-CCeEEE
Q 047215          584 -----MILVYEYMANGTLRSHLFG--SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-NFVAKM  655 (851)
Q Consensus       584 -----~~lV~Ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-~~~~kl  655 (851)
                           .++||||++++ |.+.+..  .....+++..+..++.|++.||.|||. ...+|+||||||+|||++. ++.+||
T Consensus        96 ~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp~NIll~~~~~~~kl  173 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKPHNVLVNEADGTLKL  173 (360)
T ss_dssp             TTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred             ccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCHHHEEEeCCCCcEEE
Confidence                 88999999875 4333321  234568899999999999999999992 1389999999999999996 899999


Q ss_pred             eeccccccCCCCCccccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHH
Q 047215          656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW  734 (851)
Q Consensus       656 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~  734 (851)
                      +|||+++......   ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.........  .......
T Consensus       174 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~--~~~~~~~  248 (360)
T 3e3p_A          174 CDFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQL--HEIVRVL  248 (360)
T ss_dssp             CCCTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHH
T ss_pred             eeCCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHH--HHHHHHc
Confidence            9999998644322   22345689999999998654 4899999999999999999999999765432221  1111100


Q ss_pred             -----------hhhcccccccC------ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcc
Q 047215          735 -----------QKQRSLKSIID------PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMR  797 (851)
Q Consensus       735 -----------~~~~~~~~i~d------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~  797 (851)
                                 ..........+      ...........+..+.+|+.+||+.||.+|||+.|+++|         +|++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h---------p~f~  319 (360)
T 3e3p_A          249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH---------PYFD  319 (360)
T ss_dssp             CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS---------GGGG
T ss_pred             CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC---------cccc
Confidence                       00000000000      001112223467789999999999999999999999999         8886


Q ss_pred             cC
Q 047215          798 TD  799 (851)
Q Consensus       798 ~~  799 (851)
                      ..
T Consensus       320 ~~  321 (360)
T 3e3p_A          320 EL  321 (360)
T ss_dssp             GG
T ss_pred             cc
Confidence            53

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=1.3e-37  Score=373.53  Aligned_cols=250  Identities=23%  Similarity=0.333  Sum_probs=208.0

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~  585 (851)
                      ..++|+..++||+|+||.||+|+.. .++.+|||++...   .....+.+..|..+|..+ +||+|+++++++...+.++
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            3478999999999999999999975 4678999988643   233456788899999988 7999999999999999999


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      |||||+++|+|.++|...  ..+++.++..++.||+.||.|||+   .+||||||||+||||+.++.+||+|||+++...
T Consensus       419 lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~  493 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI  493 (674)
T ss_dssp             EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred             EEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence            999999999999999654  358999999999999999999996   899999999999999999999999999998533


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ...  ......+||+.|+|||++.+..++.++|||||||+||||++|+.||......+   +   ..         .+..
T Consensus       494 ~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~---~---~~---------~i~~  556 (674)
T 3pfq_A          494 WDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---L---FQ---------SIME  556 (674)
T ss_dssp             CTT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---H---HH---------HHHS
T ss_pred             cCC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH---H---HH---------HHHh
Confidence            221  22455789999999999999999999999999999999999999997643211   1   11         1111


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTM-----GEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~evl~~  784 (851)
                      ..  ..++...+..+.+|+.+||+.||.+||++     +|+++|
T Consensus       557 ~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h  598 (674)
T 3pfq_A          557 HN--VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  598 (674)
T ss_dssp             SC--CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred             CC--CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence            11  12344566779999999999999999997     899888

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.8e-37  Score=350.95  Aligned_cols=272  Identities=20%  Similarity=0.250  Sum_probs=186.7

Q ss_pred             CCce-eeeeeeecceEEEEEEEc---CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEE--ccCCcEEEE
Q 047215          514 NFDE-SLMIGVGGFGKVFKGEIE---DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC--DEQNEMILV  587 (851)
Q Consensus       514 ~f~~-~~~LG~G~fG~Vykg~~~---~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~--~~~~~~~lV  587 (851)
                      .|+. .++||+|+||.||+|+..   .+..+|||++.....  ...+.+|+.+|++++||||+++++++  ..+...++|
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv   98 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL   98 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred             hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence            3444 347999999999999975   467899999875432  24678999999999999999999999  557789999


Q ss_pred             EEecCCcchhhhccC-------CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE----cCCCeEEEe
Q 047215          588 YEYMANGTLRSHLFG-------SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL----DENFVAKMS  656 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~-------~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl----d~~~~~kl~  656 (851)
                      |||+++ +|.+++..       .....+++..+..++.|++.||+|||+   .+|+||||||+||||    +.++.+||+
T Consensus        99 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~  174 (405)
T 3rgf_A           99 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIA  174 (405)
T ss_dssp             EECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred             EeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence            999975 77777642       122358999999999999999999996   899999999999999    778999999


Q ss_pred             eccccccCCCCC-ccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcc-------hhcH
Q 047215          657 DFGLSKTGPSME-HTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD-------QINL  727 (851)
Q Consensus       657 DFGla~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~-------~~~l  727 (851)
                      |||+++...... .........||+.|+|||++.+ ..++.++|||||||+||||++|+.||.......       ...+
T Consensus       175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l  254 (405)
T 3rgf_A          175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL  254 (405)
T ss_dssp             CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHH
T ss_pred             ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHH
Confidence            999998643221 1122345679999999999987 459999999999999999999999997543211       0011


Q ss_pred             HHHHHHHhh--hcccccc-------------cCccCCC--------CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          728 ADWAMKWQK--QRSLKSI-------------IDPHLKG--------NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       728 ~~~~~~~~~--~~~~~~i-------------~d~~l~~--------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ......+..  ......+             .......        .........+.+|+.+||+.||.+|||++|+|+|
T Consensus       255 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h  334 (405)
T 3rgf_A          255 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD  334 (405)
T ss_dssp             HHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            111100000  0000000             0000000        0001114568899999999999999999999999


Q ss_pred             HHHHHHhhhhhcccCC
Q 047215          785 LEYVLQLHEAWMRTDD  800 (851)
Q Consensus       785 L~~~~~~~~~w~~~~~  800 (851)
                               +|+....
T Consensus       335 ---------p~f~~~~  341 (405)
T 3rgf_A          335 ---------PYFLEDP  341 (405)
T ss_dssp             ---------GGGTSSS
T ss_pred             ---------hhhccCC
Confidence                     9987543

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=7.8e-37  Score=341.22  Aligned_cols=268  Identities=19%  Similarity=0.300  Sum_probs=206.2

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcC-----------CcceeeEEEEEcc
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-----------HRHLVSLIGFCDE  580 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-----------HpnIv~l~g~~~~  580 (851)
                      ++|...+.||+|+||.||+|+. .+++.+|||++... ......+.+|+.++++++           ||||+++++++..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            6799999999999999999986 56788999998743 344567889999999886           8999999999875


Q ss_pred             CC----cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCC-CeEEcCCCCCCeEEc------C
Q 047215          581 QN----EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER-GIIHRDVKTTNILLD------E  649 (851)
Q Consensus       581 ~~----~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~-~iiHrDlk~~NILld------~  649 (851)
                      .+    ..++||||+ +++|.+++.......+++.++..++.|++.||+|||+   + +|+||||||+|||++      .
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~~~  173 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSPEN  173 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETTTT
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCCcC
Confidence            44    789999999 8999999976555669999999999999999999996   6 999999999999994      4


Q ss_pred             CCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHH
Q 047215          650 NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD  729 (851)
Q Consensus       650 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~  729 (851)
                      .+.+||+|||+++....     ......||+.|+|||++.+..++.++|||||||++|||++|+.||............+
T Consensus       174 ~~~~kl~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~  248 (373)
T 1q8y_A          174 LIQIKIADLGNACWYDE-----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD  248 (373)
T ss_dssp             EEEEEECCCTTCEETTB-----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred             cceEEEcccccccccCC-----CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence            45899999999976432     1234568999999999999999999999999999999999999997644221111111


Q ss_pred             HHHHHhh-hcc---------------------cccccCc---------cCCCCCChhHHHHHHHHHHHhcccCCCCCCCH
Q 047215          730 WAMKWQK-QRS---------------------LKSIIDP---------HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTM  778 (851)
Q Consensus       730 ~~~~~~~-~~~---------------------~~~i~d~---------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~  778 (851)
                      ....... .+.                     ...+...         .....++...+..+.+|+.+||+.||.+|||+
T Consensus       249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  328 (373)
T 1q8y_A          249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA  328 (373)
T ss_dssp             HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred             HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence            1111000 000                     0000000         00123556788899999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhhcccC
Q 047215          779 GEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       779 ~evl~~L~~~~~~~~~w~~~~  799 (851)
                      +|+++|         +|+...
T Consensus       329 ~ell~h---------p~f~~~  340 (373)
T 1q8y_A          329 GGLVNH---------PWLKDT  340 (373)
T ss_dssp             HHHHTC---------GGGTTC
T ss_pred             HHHhhC---------hhhhcc
Confidence            999999         898753

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=6e-37  Score=340.08  Aligned_cols=261  Identities=21%  Similarity=0.321  Sum_probs=202.4

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCc-----
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE-----  583 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~-----  583 (851)
                      .++|...+.||+|+||.||+|+.. +++.+|||++...  .....+.+.+|+.++++++||||+++++++.....     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            367888999999999999999874 5788999998654  33445778999999999999999999999977654     


Q ss_pred             -EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          584 -MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       584 -~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                       .++||||++ |+|.+++..    .+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       103 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  174 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR  174 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred             eEEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeeccccc
Confidence             499999998 699888732    48999999999999999999995   899999999999999999999999999997


Q ss_pred             cCCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh----
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ----  737 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~----  737 (851)
                      ....     ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+...   ........    
T Consensus       175 ~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~---~i~~~~~~~~~~  246 (353)
T 3coi_A          175 HADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT---QILKVTGVPGTE  246 (353)
T ss_dssp             C-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHH---HHHHHHCBCCHH
T ss_pred             CCCC-----CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHhCCCCHH
Confidence            6322     1234568999999999876 689999999999999999999999997653322111   11000000    


Q ss_pred             --------------cccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          738 --------------RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       738 --------------~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                                    ..+.....+.+ ....+..+..+.+|+.+||+.||.+|||++|+++|         +|+..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h---------p~f~~  311 (353)
T 3coi_A          247 FVQKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH---------PFFEP  311 (353)
T ss_dssp             HHTTCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS---------GGGTT
T ss_pred             HHHHHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC---------cchhh
Confidence                          00000000011 12234556789999999999999999999999999         88764

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=2.9e-37  Score=345.21  Aligned_cols=262  Identities=20%  Similarity=0.313  Sum_probs=201.8

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcE----
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEM----  584 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~----  584 (851)
                      .++|...+.||+|+||.||+|... +++.+|||++...  .......+.+|+.++++++||||+++++++...+..    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            468999999999999999999864 5788999998764  344467889999999999999999999999877655    


Q ss_pred             --EEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          585 --ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       585 --~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                        ++||||++ ++|.+.+.    ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       121 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~  192 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR  192 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred             eEEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCccc
Confidence              99999998 68888873    248999999999999999999995   899999999999999999999999999997


Q ss_pred             cCCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhh--hc-
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK--QR-  738 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~--~~-  738 (851)
                      ....     ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+...  ........  .. 
T Consensus       193 ~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~--~i~~~~~~~~~~~  265 (371)
T 4exu_A          193 HADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT--QILKVTGVPGTEF  265 (371)
T ss_dssp             ------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCCCCHHH
T ss_pred             cccc-----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHH--HHHHHhCCCcHHH
Confidence            5322     1234568999999999987 789999999999999999999999997643222111  10000000  00 


Q ss_pred             -----------ccccccCccCCC---CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          739 -----------SLKSIIDPHLKG---NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       739 -----------~~~~i~d~~l~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                                 ....+. .....   ...+..+..+.+|+.+||+.||.+|||++|+++|         +|++.
T Consensus       266 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h---------p~f~~  329 (371)
T 4exu_A          266 VQKLNDKAAKSYIQSLP-QTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH---------PFFEP  329 (371)
T ss_dssp             HTTCSCHHHHHHHHHSC-CCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS---------GGGTT
T ss_pred             HHHhhhhhhhhhhhccC-CCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC---------ccccc
Confidence                       000000 00000   0112345679999999999999999999999999         88763

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=1.2e-36  Score=350.50  Aligned_cols=265  Identities=17%  Similarity=0.219  Sum_probs=209.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCC-cceeeEEEEEccCCcEEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRH-RHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H-pnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .++|.+.++||+|+||.||+|+. .++..||||++......  ..+..|+++++.++| +++..+..++...+..+||||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            46789999999999999999986 56788999986654332  357889999999976 566666667778888999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE---cCCCeEEEeeccccccCCC
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL---DENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl---d~~~~~kl~DFGla~~~~~  666 (851)
                      |+ +++|.+++.... ..+++.+++.++.||+.||.|||+   ++||||||||+||||   +.++.+||+|||+++....
T Consensus        84 ~~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~  158 (483)
T 3sv0_A           84 LL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD  158 (483)
T ss_dssp             CC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred             CC-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence            99 999999986432 468999999999999999999995   899999999999999   6889999999999986433


Q ss_pred             CCcc-----ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc
Q 047215          667 MEHT-----HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK  741 (851)
Q Consensus       667 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  741 (851)
                      ....     .......||+.|+|||++.+..++.++|||||||+||||++|+.||.........................
T Consensus       159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~  238 (483)
T 3sv0_A          159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE  238 (483)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH
T ss_pred             CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH
Confidence            2211     11235679999999999999999999999999999999999999998765443332222222211111111


Q ss_pred             cccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhh
Q 047215          742 SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH  792 (851)
Q Consensus       742 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  792 (851)
                      .+         ...++..+.+|+.+||+.+|.+||+++++++.|+.+....
T Consensus       239 ~l---------~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~  280 (483)
T 3sv0_A          239 AL---------CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE  280 (483)
T ss_dssp             HH---------HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HH---------hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence            11         1123456899999999999999999999999999887643

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=4.3e-37  Score=332.31  Aligned_cols=258  Identities=25%  Similarity=0.430  Sum_probs=199.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc----------
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE----------  580 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~----------  580 (851)
                      .++|+..+.||+|+||.||+|+.. +++.+|||++.. .....+.+.+|+.++++++||||+++++++..          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            467899999999999999999964 678899998854 34456788999999999999999999998754          


Q ss_pred             ---CCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEee
Q 047215          581 ---QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSD  657 (851)
Q Consensus       581 ---~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~D  657 (851)
                         .+..++||||+++|+|.+++.... ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~d  159 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGD  159 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECC
T ss_pred             cccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEee
Confidence               467899999999999999996533 457788999999999999999995   8999999999999999999999999


Q ss_pred             ccccccCCCCC------------ccccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcch
Q 047215          658 FGLSKTGPSME------------HTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ  724 (851)
Q Consensus       658 FGla~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~  724 (851)
                      ||+++......            .........||+.|+|||++.+. .++.++|||||||++|||++   |+...     
T Consensus       160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~-----  231 (303)
T 1zy4_A          160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG-----  231 (303)
T ss_dssp             CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH-----
T ss_pred             CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc-----
Confidence            99997643211            01122345689999999999764 78999999999999999998   33211     


Q ss_pred             hcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          725 INLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       725 ~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      ....+.......       ....+...++...+..+.+++.+||+.||.+|||++++++|         +|+..
T Consensus       232 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h---------~~~~~  289 (303)
T 1zy4_A          232 MERVNILKKLRS-------VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS---------GWLPV  289 (303)
T ss_dssp             HHHHHHHHHHHS-------TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS---------SCSCC
T ss_pred             hhHHHHHHhccc-------cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC---------CCcCC
Confidence            111111111111       11222334455666779999999999999999999999999         99864

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=5e-37  Score=338.50  Aligned_cols=253  Identities=19%  Similarity=0.267  Sum_probs=175.9

Q ss_pred             hcCCceee-eeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc----CCcEE
Q 047215          512 TNNFDESL-MIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE----QNEMI  585 (851)
Q Consensus       512 t~~f~~~~-~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~----~~~~~  585 (851)
                      .++|...+ +||+|+||.||+|+.. +++.+|||++....    ....+....++.+.||||+++++++..    +...+
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~  102 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL  102 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence            46888854 6999999999999876 57899999986532    122223334566799999999999865    45689


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC---CCeEEEeeccccc
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE---NFVAKMSDFGLSK  662 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~---~~~~kl~DFGla~  662 (851)
                      +||||+++|+|.+++.......+++.++..++.|++.||.|||+   .+|+||||||+|||++.   ++.+||+|||+++
T Consensus       103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~  179 (336)
T 3fhr_A          103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK  179 (336)
T ss_dssp             EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence            99999999999999987666679999999999999999999995   89999999999999975   5569999999997


Q ss_pred             cCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      .....    ......||+.|+|||++.+..++.++||||||+++|||++|+.||...........   ......      
T Consensus       180 ~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~------  246 (336)
T 3fhr_A          180 ETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG---MKRRIR------  246 (336)
T ss_dssp             EC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred             ecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh---HHHhhh------
Confidence            63321    22345689999999999888999999999999999999999999865433211000   000000      


Q ss_pred             ccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       743 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .............++..+.+|+.+||+.||.+|||++|+++|
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  288 (336)
T 3fhr_A          247 LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH  288 (336)
T ss_dssp             ----CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             ccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            000011111223456679999999999999999999999999

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=4.8e-37  Score=367.37  Aligned_cols=261  Identities=24%  Similarity=0.349  Sum_probs=208.3

Q ss_pred             HHHhcCCceeeeeeeecceEEEEEEEcC----cceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCc
Q 047215          509 RVATNNFDESLMIGVGGFGKVFKGEIED----CTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE  583 (851)
Q Consensus       509 ~~~t~~f~~~~~LG~G~fG~Vykg~~~~----~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~  583 (851)
                      ....++|+..+.||+|+||.||+|....    +..+|+|+.... .....+.|.+|+.++++++||||+++++++. ++.
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~  464 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP  464 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence            3445789999999999999999998743    356899987764 4445578999999999999999999999995 457


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .++||||+++|+|.+++.... ..+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++.
T Consensus       465 ~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~  540 (656)
T 2j0j_A          465 VWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY  540 (656)
T ss_dssp             CEEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred             eEEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCee
Confidence            899999999999999996543 458999999999999999999996   8999999999999999999999999999986


Q ss_pred             CCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      ..... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+   ..   .... .+    
T Consensus       541 ~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~---~~---~~i~-~~----  608 (656)
T 2j0j_A          541 MEDST-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VI---GRIE-NG----  608 (656)
T ss_dssp             CCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HH---HHHH-HT----
T ss_pred             cCCCc-ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH---HH---HHHH-cC----
Confidence            53322 112234457889999999999999999999999999999997 888886543221   11   1111 11    


Q ss_pred             ccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       743 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                           .....+..++..+.+++.+||+.||.+|||+.+++++|+.+++.
T Consensus       609 -----~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          609 -----ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -----CCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence                 01123445667899999999999999999999999999988653

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=8.2e-37  Score=338.10  Aligned_cols=268  Identities=18%  Similarity=0.262  Sum_probs=206.7

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-Cc-ceeEEeecCCCChhhHHHHHHHHHHHHhcCCcc------eeeEEEEEccCCc
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DC-TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRH------LVSLIGFCDEQNE  583 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~-~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~Hpn------Iv~l~g~~~~~~~  583 (851)
                      .++|+..+.||+|+||.||+|... .+ ..+|+|++... ....+.+.+|+.++++++|++      ++.+.+++...+.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            368999999999999999999864 33 68999998754 344567889999999998776      9999999999999


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEE----------------
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILL----------------  647 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILl----------------  647 (851)
                      .++||||+ +++|.+.+.......+++.++..++.|++.||+|||+   .+|+||||||+|||+                
T Consensus        97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~  172 (355)
T 2eu9_A           97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCE  172 (355)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred             EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeccccccccccccccc
Confidence            99999999 5667677665555679999999999999999999995   899999999999999                


Q ss_pred             ---cCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcch
Q 047215          648 ---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQ  724 (851)
Q Consensus       648 ---d~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~  724 (851)
                         +.++.+||+|||+++.....     .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.
T Consensus       173 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  247 (355)
T 2eu9_A          173 EKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH  247 (355)
T ss_dssp             EEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence               56889999999999763221     2345789999999999999999999999999999999999999976543222


Q ss_pred             hcHHHHHHH-----Hhhhcccccc-cCc-------------------cC--CCCCChhHHHHHHHHHHHhcccCCCCCCC
Q 047215          725 INLADWAMK-----WQKQRSLKSI-IDP-------------------HL--KGNYSPESLEKFGEIAEKCLDDEGKNRPT  777 (851)
Q Consensus       725 ~~l~~~~~~-----~~~~~~~~~i-~d~-------------------~l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt  777 (851)
                      .........     +......... ...                   .+  ........+..+.+|+.+||+.||.+|||
T Consensus       248 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt  327 (355)
T 2eu9_A          248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT  327 (355)
T ss_dssp             HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcC
Confidence            111111000     0000000000 000                   00  00112344668999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhhccc
Q 047215          778 MGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       778 ~~evl~~L~~~~~~~~~w~~~  798 (851)
                      +.|+++|         +|+..
T Consensus       328 ~~e~l~h---------p~f~~  339 (355)
T 2eu9_A          328 LAEALLH---------PFFAG  339 (355)
T ss_dssp             HHHHTTS---------GGGGG
T ss_pred             HHHHhcC---------hhhcC
Confidence            9999999         88875

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=8e-37  Score=335.16  Aligned_cols=255  Identities=23%  Similarity=0.291  Sum_probs=181.6

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHH-HHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIE-MLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~-~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      .++|...+.||+|+||.||+|... +++.+|||++... .......+..|+. +++.++||||+++++++..++..++||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            367888899999999999999975 6788999988764 3344455666666 677789999999999999999999999


Q ss_pred             EecCCcchhhhccC---CCCCCCchhhhHHHHHHHHHHHHHhhcCCCC-CeEEcCCCCCCeEEcCCCeEEEeeccccccC
Q 047215          589 EYMANGTLRSHLFG---SDLPPLTWKQRLDACIGAARGLHYLHTGAER-GIIHRDVKTTNILLDENFVAKMSDFGLSKTG  664 (851)
Q Consensus       589 Ey~~~gsL~~~L~~---~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~-~iiHrDlk~~NILld~~~~~kl~DFGla~~~  664 (851)
                      ||+++ +|.+++..   .....+++..+..++.|++.||.|||+   . +|+||||||+|||++.++.+||+|||+++..
T Consensus       101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  176 (327)
T 3aln_A          101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL  176 (327)
T ss_dssp             CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred             eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence            99985 77776642   224568999999999999999999996   6 9999999999999999999999999999764


Q ss_pred             CCCCccccccccccCCcccCcccc----cccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc
Q 047215          665 PSMEHTHVSTAVKGSFGYLDPEYF----WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL  740 (851)
Q Consensus       665 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  740 (851)
                      ...   .......||+.|+|||++    .+..++.++||||||+++|||++|+.||........           .....
T Consensus       177 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----------~~~~~  242 (327)
T 3aln_A          177 VDS---IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-----------QLTQV  242 (327)
T ss_dssp             --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------------CCC
T ss_pred             ccc---cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-----------HHHHH
Confidence            321   112334689999999998    466799999999999999999999999875322100           00001


Q ss_pred             ccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       741 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .....+.+........+..+.+|+.+||+.||.+|||+.++++|
T Consensus       243 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  286 (327)
T 3aln_A          243 VKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH  286 (327)
T ss_dssp             CCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             hcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence            11111122222223456779999999999999999999999999

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=1.8e-36  Score=345.80  Aligned_cols=253  Identities=21%  Similarity=0.253  Sum_probs=189.9

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      +.|...++||+|+||+||.+...+++.||||++...   ..+.+.+|+.+|+++ +||||+++++++..++..++||||+
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~   91 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC   91 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred             heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence            345556889999999998776677899999987643   235678899999987 8999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCC-----CchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-------------CCeE
Q 047215          592 ANGTLRSHLFGSDLPP-----LTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-------------NFVA  653 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~-----l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-------------~~~~  653 (851)
                      + |+|.+++.......     ..+.+++.++.|++.||+|||+   .+|+||||||+|||++.             ++.+
T Consensus        92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~  167 (434)
T 2rio_A           92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI  167 (434)
T ss_dssp             S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred             C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEE
Confidence            6 69999997643211     2445678899999999999996   89999999999999965             4589


Q ss_pred             EEeeccccccCCCCCcc--ccccccccCCcccCcccccc-------cCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcc
Q 047215          654 KMSDFGLSKTGPSMEHT--HVSTAVKGSFGYLDPEYFWR-------QQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKD  723 (851)
Q Consensus       654 kl~DFGla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-------~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~  723 (851)
                      ||+|||+++........  .......||+.|+|||++.+       ..++.++|||||||++|||++ |+.||.......
T Consensus       168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~  247 (434)
T 2rio_A          168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE  247 (434)
T ss_dssp             EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred             EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence            99999999865432211  11234579999999999975       678999999999999999999 888886543221


Q ss_pred             hhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          724 QINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       724 ~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .    .    ... +. .  ..+..........+..+.+++.+||+.||.+|||+.|+++|
T Consensus       248 ~----~----i~~-~~-~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  296 (434)
T 2rio_A          248 S----N----IIR-GI-F--SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH  296 (434)
T ss_dssp             H----H----HHH-TC-C--CCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             H----H----Hhc-CC-C--CcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence            0    0    000 00 0  01111222245677889999999999999999999999998

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=4.6e-37  Score=330.65  Aligned_cols=251  Identities=24%  Similarity=0.323  Sum_probs=201.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      .++|+..+.||+|+||.||+|+.. +++.+|+|++...  .......+.+|++++++++||||+++++++...+..++|+
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            468999999999999999999875 6788999987543  2345678999999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC---CCeEEEeeccccccCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE---NFVAKMSDFGLSKTGP  665 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~---~~~~kl~DFGla~~~~  665 (851)
                      ||+++++|.+.+...  ..+++.++..++.|++.||.|||+   .+++||||||+||+++.   ++.+||+|||+++...
T Consensus       101 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~  175 (287)
T 2wei_A          101 ELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (287)
T ss_dssp             CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred             EccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence            999999999888543  358899999999999999999995   89999999999999965   4479999999987643


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ...   ......||+.|+|||.+.+ .++.++||||||+++|||++|+.||......+      ...... .+...  .+
T Consensus       176 ~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~-~~~~~--~~  242 (287)
T 2wei_A          176 QNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------ILKRVE-TGKYA--FD  242 (287)
T ss_dssp             CCS---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHH-HCCCC--CC
T ss_pred             CCC---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH------HHHHHH-cCCCC--CC
Confidence            221   1223458899999999865 48999999999999999999999987543211      111111 11100  00


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      .    ......+..+.+++.+||+.||.+|||+.|+++|
T Consensus       243 ~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          243 L----PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             S----GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             c----hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence            0    0012345678999999999999999999999999

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=8.7e-38  Score=341.16  Aligned_cols=264  Identities=22%  Similarity=0.378  Sum_probs=202.8

Q ss_pred             HHHHHHHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC
Q 047215          505 LAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN  582 (851)
Q Consensus       505 ~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~  582 (851)
                      ..+.....++|+..+.||+|+||.||+|+..+  .+++|++...  .....+.+.+|+.++++++||||+++++++..++
T Consensus        25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  102 (319)
T 2y4i_B           25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP  102 (319)
T ss_dssp             GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred             cccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence            34444456889999999999999999998764  4788877643  2334456788999999999999999999999999


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      ..++||||+++++|.+++.... ..+++.++..++.|++.||.|||+   .+++||||||+|||++ ++.+||+|||+++
T Consensus       103 ~~~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~  177 (319)
T 2y4i_B          103 HLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFS  177 (319)
T ss_dssp             CEEEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC
T ss_pred             ceEEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCcc
Confidence            9999999999999999996543 468999999999999999999995   8999999999999998 6799999999987


Q ss_pred             cCCCCC---ccccccccccCCcccCcccccc---------cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHH
Q 047215          663 TGPSME---HTHVSTAVKGSFGYLDPEYFWR---------QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADW  730 (851)
Q Consensus       663 ~~~~~~---~~~~~~~~~gt~~y~aPE~~~~---------~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~  730 (851)
                      ......   .........||+.|+|||.+..         ..++.++||||||+++|||++|+.||.......      .
T Consensus       178 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~  251 (319)
T 2y4i_B          178 ISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA------I  251 (319)
T ss_dssp             ----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH------H
T ss_pred             ccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------H
Confidence            532211   1122234568999999999874         458999999999999999999999987543221      1


Q ss_pred             HHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          731 AMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       731 ~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ..... .+     ..+.+.   ...++..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus       252 ~~~~~-~~-----~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~  302 (319)
T 2y4i_B          252 IWQMG-TG-----MKPNLS---QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPK  302 (319)
T ss_dssp             HHHHH-TT-----CCCCCC---CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred             HHHhc-cC-----CCCCCC---cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            11111 11     111111   11234458899999999999999999999999886654

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.6e-37  Score=333.41  Aligned_cols=250  Identities=25%  Similarity=0.408  Sum_probs=196.1

Q ss_pred             HHHhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChh------hHHHHHHHHHHHHhc----CCcceeeEEEE
Q 047215          509 RVATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQ------GLAEFETEIEMLSKL----RHRHLVSLIGF  577 (851)
Q Consensus       509 ~~~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~------~~~~~~~Ei~~l~~l----~HpnIv~l~g~  577 (851)
                      ....++|...+.||+|+||.||+|+. .+++.+|+|++......      ....+.+|+.++.++    +||||++++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~  106 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW  106 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence            34457899999999999999999986 46788999998654321      223466799999999    89999999999


Q ss_pred             EccCCcEEEEEEe-cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc-CCCeEEE
Q 047215          578 CDEQNEMILVYEY-MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKM  655 (851)
Q Consensus       578 ~~~~~~~~lV~Ey-~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld-~~~~~kl  655 (851)
                      +...+..++|+|+ +++++|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++ .++.+||
T Consensus       107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl  181 (312)
T 2iwi_A          107 FETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAKL  181 (312)
T ss_dssp             C-----CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEEEE
T ss_pred             EecCCeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeEEE
Confidence            9999999999999 7899999999653  358999999999999999999995   8999999999999999 8999999


Q ss_pred             eeccccccCCCCCccccccccccCCcccCcccccccCCC-chHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHH
Q 047215          656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT-EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW  734 (851)
Q Consensus       656 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t-~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~  734 (851)
                      +|||+++.....    ......||..|+|||++.+..+. .++||||||+++|||++|+.||....        +    .
T Consensus       182 ~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~----~  245 (312)
T 2iwi_A          182 IDFGSGALLHDE----PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ--------E----I  245 (312)
T ss_dssp             CCCSSCEECCSS----CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------H----H
T ss_pred             EEcchhhhcccC----cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH--------H----H
Confidence            999998864332    12345689999999999877664 58999999999999999999885320        0    0


Q ss_pred             hhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          735 QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       735 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      ..         ..  ..++...+..+.+++.+||+.||++|||++|+++|         +|++..
T Consensus       246 ~~---------~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~---------~~~~~~  290 (312)
T 2iwi_A          246 LE---------AE--LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD---------PWMQTP  290 (312)
T ss_dssp             HH---------TC--CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS---------TTTCC-
T ss_pred             hh---------hc--cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC---------hhhcCc
Confidence            00         00  11234455678999999999999999999999999         887643

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.7e-36  Score=342.68  Aligned_cols=252  Identities=23%  Similarity=0.285  Sum_probs=190.6

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ...+|...++||+|+||+||.....+++.||||++......   .+.+|+++|+++ +|||||++++++..++..++|||
T Consensus        22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E   98 (432)
T 3p23_A           22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE   98 (432)
T ss_dssp             TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence            44678889999999999976655667889999998764332   356899999999 79999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc-----CCCeEEEeeccccccC
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-----ENFVAKMSDFGLSKTG  664 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld-----~~~~~kl~DFGla~~~  664 (851)
                      |++ |+|.+++.... ..+.+.++..++.|++.||+|||+   .+|+||||||+|||++     ....+||+|||+++..
T Consensus        99 ~~~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~  173 (432)
T 3p23_A           99 LCA-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL  173 (432)
T ss_dssp             CCS-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred             CCC-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence            997 69999987654 345566778999999999999996   8999999999999994     3346889999999864


Q ss_pred             CCCCc-cccccccccCCcccCccccc---ccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcc
Q 047215          665 PSMEH-THVSTAVKGSFGYLDPEYFW---RQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRS  739 (851)
Q Consensus       665 ~~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~  739 (851)
                      ..... ........||+.|+|||++.   ...++.++|||||||++|||++ |+.||........       ....... 
T Consensus       174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~-------~~~~~~~-  245 (432)
T 3p23_A          174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA-------NILLGAC-  245 (432)
T ss_dssp             ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH-------HHHTTCC-
T ss_pred             cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH-------HHHhccC-
Confidence            43211 12234567999999999997   4678889999999999999999 8888754322110       0000000 


Q ss_pred             cccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          740 LKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       740 ~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                          ..+..  .........+.+|+.+||+.||.+|||++|+++|
T Consensus       246 ----~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h  284 (432)
T 3p23_A          246 ----SLDCL--HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH  284 (432)
T ss_dssp             ----CCTTS--CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ----Ccccc--CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence                00001  1123445668899999999999999999999998

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=2.6e-36  Score=329.12  Aligned_cols=253  Identities=22%  Similarity=0.301  Sum_probs=181.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCCh--hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE--QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      .++|+..+.||+|+||.||+|+.. +++.+|||++.....  ...+.+.++..+++.++||||+++++++..++..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            367888999999999999999975 678899999875432  22334555556788889999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+ ++.+..++. .....+++..+..++.|++.||.|||+  ..+++||||||+|||++.++.+||+|||+++..... 
T Consensus       104 e~~-~~~~~~l~~-~~~~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~-  178 (318)
T 2dyl_A          104 ELM-GTCAEKLKK-RMQGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD-  178 (318)
T ss_dssp             CCC-SEEHHHHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHH--HHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred             ecc-CCcHHHHHH-HhccCCCHHHHHHHHHHHHHHHHHHHh--hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC-
Confidence            999 445544443 223568999999999999999999995  238999999999999999999999999998753321 


Q ss_pred             ccccccccccCCcccCccccc-----ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          669 HTHVSTAVKGSFGYLDPEYFW-----RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                        .......||+.|+|||++.     ...++.++||||||+++|||++|+.||.......     +.........     
T Consensus       179 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~~-----  246 (318)
T 2dyl_A          179 --KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF-----EVLTKVLQEE-----  246 (318)
T ss_dssp             ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH-----HHHHHHHHSC-----
T ss_pred             --ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH-----HHHHHHhccC-----
Confidence              1223456899999999994     5678999999999999999999999987532211     1111111110     


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       .+.+.  .....+..+.+++.+||+.||.+|||++|+++|
T Consensus       247 -~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          247 -PPLLP--GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             -CCCCC--SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             -CCCCC--ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence             01111  112345668999999999999999999999999

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=5.8e-37  Score=335.57  Aligned_cols=251  Identities=22%  Similarity=0.370  Sum_probs=203.0

Q ss_pred             HHHHHhcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCCh------hhHHHHHHHHHHHHhcC--CcceeeEEEE
Q 047215          507 EIRVATNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSE------QGLAEFETEIEMLSKLR--HRHLVSLIGF  577 (851)
Q Consensus       507 ~l~~~t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~------~~~~~~~~Ei~~l~~l~--HpnIv~l~g~  577 (851)
                      +.....++|+..+.||+|+||.||+|+. .+++.+|||++.....      .....+.+|+.++++++  ||||++++++
T Consensus        37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~  116 (320)
T 3a99_A           37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW  116 (320)
T ss_dssp             ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred             ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence            3344567899999999999999999986 4678899998764321      12245678999999996  5999999999


Q ss_pred             EccCCcEEEEEEecCC-cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc-CCCeEEE
Q 047215          578 CDEQNEMILVYEYMAN-GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKM  655 (851)
Q Consensus       578 ~~~~~~~~lV~Ey~~~-gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld-~~~~~kl  655 (851)
                      +..++..++|+|++.+ ++|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++ +++.+||
T Consensus       117 ~~~~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL  191 (320)
T 3a99_A          117 FERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKL  191 (320)
T ss_dssp             EECSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEE
T ss_pred             EecCCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEE
Confidence            9999999999999986 8999998543  468899999999999999999995   8999999999999999 7899999


Q ss_pred             eeccccccCCCCCccccccccccCCcccCcccccccCC-CchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHH
Q 047215          656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKW  734 (851)
Q Consensus       656 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~  734 (851)
                      +|||+++.....    ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||....        +    .
T Consensus       192 ~Dfg~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--------~----~  255 (320)
T 3a99_A          192 IDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------E----I  255 (320)
T ss_dssp             CCCTTCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------H----H
T ss_pred             eeCccccccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh--------h----h
Confidence            999999864322    2234568999999999987765 788999999999999999999885321        0    0


Q ss_pred             hhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          735 QKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       735 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      . ...      .    .++...+..+.+++.+||+.||.+|||++|+++|         +|++.
T Consensus       256 ~-~~~------~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h---------p~~~~  299 (320)
T 3a99_A          256 I-RGQ------V----FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH---------PWMQD  299 (320)
T ss_dssp             H-HCC------C----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS---------GGGSS
T ss_pred             h-ccc------c----cccccCCHHHHHHHHHHccCChhhCcCHHHHhcC---------HhhcC
Confidence            0 000      0    1223345668999999999999999999999999         88764

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=1.1e-35  Score=350.27  Aligned_cols=261  Identities=25%  Similarity=0.308  Sum_probs=202.7

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc------CCcE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE------QNEM  584 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~------~~~~  584 (851)
                      ++|...++||+|+||.||+|.. .++..+|||++... .....+.+.+|++++++++||||+++++++..      ++..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            6799999999999999999986 45788999998764 45556789999999999999999999999865      6788


Q ss_pred             EEEEEecCCcchhhhccCCC-CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC---eEEEeeccc
Q 047215          585 ILVYEYMANGTLRSHLFGSD-LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF---VAKMSDFGL  660 (851)
Q Consensus       585 ~lV~Ey~~~gsL~~~L~~~~-~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~---~~kl~DFGl  660 (851)
                      ++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+   .+|+||||||+|||++.++   .+||+|||+
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~  170 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGY  170 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence            99999999999999997643 3468999999999999999999996   8999999999999998665   499999999


Q ss_pred             cccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcc-
Q 047215          661 SKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS-  739 (851)
Q Consensus       661 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~-  739 (851)
                      ++.....   .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.+....     ..|......... 
T Consensus       171 a~~~~~~---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~~~~~  242 (676)
T 3qa8_A          171 AKELDQG---ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREKSNE  242 (676)
T ss_dssp             CCBTTSC---CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC-----
T ss_pred             ccccccc---cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhcccch
Confidence            9864332   2234467999999999999999999999999999999999999998754211     111110000000 


Q ss_pred             ---cccccC------c--cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          740 ---LKSIID------P--HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       740 ---~~~i~d------~--~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                         ......      .  ......+...+..+.+++.+||+.||.+|||++|+++|
T Consensus       243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~h  298 (676)
T 3qa8_A          243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNV  298 (676)
T ss_dssp             -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCC
T ss_pred             hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcC
Confidence               000000      0  11223456688999999999999999999999997766

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.1e-34  Score=349.89  Aligned_cols=240  Identities=20%  Similarity=0.311  Sum_probs=193.0

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc--CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCc-----
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE--DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNE-----  583 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~--~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~-----  583 (851)
                      .++|.+.++||+|+||.||+|...  +++.||||++... .......+.+|++++++++||||+++++++...+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            378999999999999999999975  5788999988654 44556678999999999999999999999977665     


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .+|||||+++++|.+++..    .+++.+++.++.|++.||.|||+   ++||||||||+|||++.+ .+||+|||+++.
T Consensus       159 ~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~~  230 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSR  230 (681)
T ss_dssp             EEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             eEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccchh
Confidence            7999999999999988743    68999999999999999999995   899999999999999986 899999999986


Q ss_pred             CCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      ....      ....||+.|+|||++.+. ++.++|||||||+|+||++|..|+.......                   +
T Consensus       231 ~~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~-------------------~  284 (681)
T 2pzi_A          231 INSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG-------------------L  284 (681)
T ss_dssp             TTCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS-------------------C
T ss_pred             cccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc-------------------c
Confidence            4322      345699999999998765 4999999999999999999988765421110                   0


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCC-HHHHHHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT-MGEVLWHLEYVL  789 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~evl~~L~~~~  789 (851)
                      .    ........+..+.+++.+||+.||.+||+ ++++.+.|..++
T Consensus       285 ~----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  327 (681)
T 2pzi_A          285 P----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL  327 (681)
T ss_dssp             C----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             c----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence            0    00001223467899999999999999996 555555555544

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=2.7e-34  Score=311.15  Aligned_cols=227  Identities=21%  Similarity=0.344  Sum_probs=180.9

Q ss_pred             cCCcee-eeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHH-HhcCCcceeeEEEEEcc----CCcEE
Q 047215          513 NNFDES-LMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEML-SKLRHRHLVSLIGFCDE----QNEMI  585 (851)
Q Consensus       513 ~~f~~~-~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l-~~l~HpnIv~l~g~~~~----~~~~~  585 (851)
                      ++|... ++||+|+||.||++.. .+++.+|+|++...     ..+.+|+.++ +.++||||+++++++..    +...+
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            566666 7799999999999987 46788999998642     4567899888 55689999999999876    67889


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC---CCeEEEeeccccc
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE---NFVAKMSDFGLSK  662 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~---~~~~kl~DFGla~  662 (851)
                      +||||+++|+|.+++.......+++.++..++.|++.||.|||+   .+|+||||||+|||++.   ++.+||+|||+++
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~  168 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK  168 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence            99999999999999977665679999999999999999999995   89999999999999987   7899999999986


Q ss_pred             cCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      ...                        +..++.++|||||||++|||++|+.||.........           ......
T Consensus       169 ~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-----------~~~~~~  213 (299)
T 3m2w_A          169 ETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-----------PGMKTR  213 (299)
T ss_dssp             ECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CCSCCS
T ss_pred             ccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-----------HHHHHH
Confidence            421                        234678999999999999999999998654322100           000011


Q ss_pred             ccCccCCCCCC----hhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          743 IIDPHLKGNYS----PESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       743 i~d~~l~~~~~----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +.....  ..+    ..++..+.+++.+||+.||.+|||++|+++|
T Consensus       214 ~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          214 IRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             SCTTCC--SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             Hhhccc--cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            111111  112    2346779999999999999999999999999

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=4.9e-34  Score=307.26  Aligned_cols=230  Identities=11%  Similarity=0.099  Sum_probs=185.7

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcC-cceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIED-CTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      .++|++.+.||+|+||.||+|+... ++.+|||++....   ....+.+.+|+.++++++||||+++++++..++..++|
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  109 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV  109 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence            3679999999999999999999754 7889999987652   34457899999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      |||+++++|.+++...    ....++.+++.|++.||+|||+   ++|+||||||+|||++.++.+||+++|        
T Consensus       110 ~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~--------  174 (286)
T 3uqc_A          110 AEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA--------  174 (286)
T ss_dssp             EECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred             EEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc--------
Confidence            9999999999999432    3455789999999999999995   899999999999999999999998443        


Q ss_pred             CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                                    |++       .++.++|||||||++|||++|+.||...........            ........
T Consensus       175 --------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~------------~~~~~~~~  221 (286)
T 3uqc_A          175 --------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP------------AERDTAGQ  221 (286)
T ss_dssp             --------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE------------CCBCTTSC
T ss_pred             --------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH------------HHHHhccC
Confidence                          333       378999999999999999999999986544321100            00000000


Q ss_pred             CC--CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          748 LK--GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       748 l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ..  ......++..+.+++.+||+.||.+| |+.|+++.|+.+..
T Consensus       222 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~  265 (286)
T 3uqc_A          222 PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA  265 (286)
T ss_dssp             BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred             CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence            00  01123456679999999999999999 99999999987653

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=3.9e-35  Score=323.15  Aligned_cols=243  Identities=18%  Similarity=0.180  Sum_probs=185.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCC--------hhhHHHHHHHHHHHHhcC---------CcceeeE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQS--------EQGLAEFETEIEMLSKLR---------HRHLVSL  574 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~--------~~~~~~~~~Ei~~l~~l~---------HpnIv~l  574 (851)
                      .++|+..+.||+|+||+||+|+. +++.||||++....        ....+.+.+|+.++++++         ||||+++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            35678889999999999999997 67889999886542        233477899999999886         7777777


Q ss_pred             EEEE-----------------c-------------cCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHH
Q 047215          575 IGFC-----------------D-------------EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGL  624 (851)
Q Consensus       575 ~g~~-----------------~-------------~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL  624 (851)
                      .+.+                 .             .++..+|||||+++|++.+.+..   ..+++.++..++.|++.||
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL  174 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL  174 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence            6653                 2             26889999999999987777643   4588999999999999999


Q ss_pred             HHhh-cCCCCCeEEcCCCCCCeEEcCCC--------------------eEEEeeccccccCCCCCccccccccccCCccc
Q 047215          625 HYLH-TGAERGIIHRDVKTTNILLDENF--------------------VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYL  683 (851)
Q Consensus       625 ~yLH-s~~~~~iiHrDlk~~NILld~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~  683 (851)
                      +||| +   .+|+||||||+|||++.++                    .+||+|||+++....       ....||+.|+
T Consensus       175 ~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~  244 (336)
T 2vuw_A          175 AVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSM  244 (336)
T ss_dssp             HHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTT
T ss_pred             HHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeeccc
Confidence            9999 6   8999999999999999887                    999999999986322       2347999999


Q ss_pred             CcccccccCCCchHHHHHHHHH-HHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc-ccCccCCCCCChhHHHHHH
Q 047215          684 DPEYFWRQQLTEKSDVYSFGVV-LFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS-IIDPHLKGNYSPESLEKFG  761 (851)
Q Consensus       684 aPE~~~~~~~t~ksDVwS~Gvv-L~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~-i~d~~l~~~~~~~~~~~l~  761 (851)
                      |||++.+.. +.++||||++++ .+++++|..|+..         ..|....... .... ..............++.+.
T Consensus       245 aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~---------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~  313 (336)
T 2vuw_A          245 DEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN---------VLWLHYLTDK-MLKQMTFKTKCNTPAMKQIKRKIQ  313 (336)
T ss_dssp             CSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH---------HHHHHHHHHH-HHHTCCCSSCCCSHHHHHHHHHHH
T ss_pred             ChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc---------hhhhhHHHHh-hhhhhccCcccchhhhhhcCHHHH
Confidence            999998776 999999998777 7778888776631         1121111100 0000 0111111122346788999


Q ss_pred             HHHHHhcccCCCCCCCHHHHH-HH
Q 047215          762 EIAEKCLDDEGKNRPTMGEVL-WH  784 (851)
Q Consensus       762 ~l~~~Cl~~dP~~RPt~~evl-~~  784 (851)
                      +|+.+||+.|     |++|++ +|
T Consensus       314 dli~~~L~~d-----sa~e~l~~H  332 (336)
T 2vuw_A          314 EFHRTMLNFS-----SATDLLCQH  332 (336)
T ss_dssp             HHHHHGGGSS-----SHHHHHHHC
T ss_pred             HHHHHHhccC-----CHHHHHhcC
Confidence            9999999976     999999 89

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=1.3e-34  Score=328.42  Aligned_cols=242  Identities=15%  Similarity=0.170  Sum_probs=183.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCC-cce---------e-----
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRH-RHL---------V-----  572 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H-pnI---------v-----  572 (851)
                      +.+|...++||+|+||.||+|+. .+++.||||++....   ....+.|.+|+.+++.++| +|.         +     
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence            34577788999999999999995 567899999887432   2336789999999999977 211         1     


Q ss_pred             -e------EEEEEcc-----CCcEEEEEEecCCcchhhhcc-----CCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCe
Q 047215          573 -S------LIGFCDE-----QNEMILVYEYMANGTLRSHLF-----GSDLPPLTWKQRLDACIGAARGLHYLHTGAERGI  635 (851)
Q Consensus       573 -~------l~g~~~~-----~~~~~lV~Ey~~~gsL~~~L~-----~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~i  635 (851)
                       .      ++.++..     ....+++|+++ +++|.+++.     ......+++..++.++.|+++||+|||+   ++|
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i  232 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL  232 (413)
T ss_dssp             EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred             cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCc
Confidence             1      1111111     22456777755 689998884     3334568899999999999999999995   899


Q ss_pred             EEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccc----------cccCCCchHHHHHHHHH
Q 047215          636 IHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF----------WRQQLTEKSDVYSFGVV  705 (851)
Q Consensus       636 iHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~t~ksDVwS~Gvv  705 (851)
                      |||||||+||||+.++.+||+|||+++....     ......| +.|+|||++          ....++.++|||||||+
T Consensus       233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi  306 (413)
T 3dzo_A          233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA  306 (413)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTE-----EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred             ccCCcccceEEEecCCeEEEEeccceeecCC-----ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence            9999999999999999999999999876322     1344567 999999999          55668999999999999


Q ss_pred             HHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          706 LFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       706 L~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +|||++|+.||........               ...++..      ....++.+.+|+.+||+.||++|||+.|+++|
T Consensus       307 l~elltg~~Pf~~~~~~~~---------------~~~~~~~------~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~  364 (413)
T 3dzo_A          307 IYWIWCADLPNTDDAALGG---------------SEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET  364 (413)
T ss_dssp             HHHHHHSSCCCCTTGGGSC---------------SGGGGSS------CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHCCCCCCCcchhhh---------------HHHHHhh------cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            9999999999975432211               1111111      11234669999999999999999999999988

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.94  E-value=6.9e-28  Score=283.06  Aligned_cols=184  Identities=19%  Similarity=0.102  Sum_probs=128.4

Q ss_pred             eeeecceEEEEEE-EcCcceeEEeecCCC----------ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEEE
Q 047215          521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQ----------SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       521 LG~G~fG~Vykg~-~~~~~~vavK~~~~~----------~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      .+.|++|.+..++ .--|..+++|.+...          .....++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM  321 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM  321 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence            5566666665543 334677888877543          123456799999999999 7999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||++|++|.++|...  .+++..   +|+.||+.||+|||+   +|||||||||+||||++++++||+|||+|+..... 
T Consensus       322 Eyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~-  392 (569)
T 4azs_A          322 EKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD-  392 (569)
T ss_dssp             ECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred             ecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCCCC-
Confidence            999999999999654  345543   588999999999995   99999999999999999999999999999864332 


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV  715 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p  715 (851)
                       .......+||+.|||||++.+ .+..++|+||+|++++++.++..+
T Consensus       393 -~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          393 -CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             --CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             -CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence             222345789999999999975 467789999999999887666543

>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*

Probab=99.93  E-value=7.8e-27  Score=230.86  Aligned_cols=154  Identities=16%  Similarity=0.220  Sum_probs=118.4

Q ss_pred             EEEEEEecCCCCCcCCCCcccccccccCCCccc-ccCCCcccccCcceEeccCCCccccchhhHHHhhccCCCccccccc
Q 047215          218 ETMYRLNVGGPEIKPSRDPDLWRMWEADSSYMI-TANAGSEIRNSSNITYASTNDSSVAPLLVYETARTMSNTEVLEKRF  296 (851)
Q Consensus       218 ~~~~Rin~Gg~~~~~~~d~~~~r~W~~d~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~P~~vy~tA~~~~~~~~~~~~~  296 (851)
                      |++|||||||+.++    |..||.|.+|..|.. +..+..    ...+.+   ...+++|+.||||||.+..        
T Consensus         5 ~~~~~INcGg~~~~----d~~gr~w~~D~~~~~~g~~~~~----~~~~~~---~~~~~~~~~lY~TaR~~~~--------   65 (174)
T 2jwp_A            5 KVIWAVNAGGESHV----DVHGIHYRKDPLEGRVGRASDY----GMKLPI---LRSNPEDQVLYQTERYNED--------   65 (174)
T ss_dssp             HEEEEEEETSSSEE----ETTTEEECSSCSSTTCCCCCCC----CTTSCC---SSSCHHHHHTTTCCCCCCS--------
T ss_pred             cEEEEEECCCCCcc----CCCCCEEcCCcCcccCCccccc----ccceEe---cccCCCCchhhhhhccCCC--------
Confidence            58999999998864    257899999987642 211111    111111   1235689999999999643        


Q ss_pred             ceeeeeecCCCCceEEEEEeeeEEEecCCeEEEEEEEcCccccCCcchhhhcCCCCceeEEEeEec-------------c
Q 047215          297 NMSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDA-------------V  363 (851)
Q Consensus       297 ~lt~~~~vd~~~~Y~v~LhF~Ei~~~~~~~R~FdI~in~~~~~~~~di~~~~~~~~~~~~~~~~~~-------------~  363 (851)
                      +|+|.+|++++++|+|||||||+...+.++|+|||||||++++++|||..++++ ..|++++|...             +
T Consensus        66 ~~tY~f~v~~~G~Y~VrLhF~ei~~~~~~~rvFdV~ing~~~l~~fdi~~~ag~-~~~~~~~~~~~v~~~~l~i~~~~~~  144 (174)
T 2jwp_A           66 SFGYDIPIKEEGEYVLVLKFAEVYFAQSQQKVFDVRVNGHTVVKDLDIFDRVGH-STAHDEIIPISIKKGKLSVQGEVST  144 (174)
T ss_dssp             CEEEEEECCSCEEEEEEEEEECCSCCCSSSSCEEEEETTEEEEEEECHHHHHSS-SSCEEEEEEEEEETTEEEETTEEEE
T ss_pred             CeEEEEEeCCCeEEEEEEEEeccccCCCCCeEeEEEECCEEeecCcCHHHhhCC-CeeEEEEEEEEEecCceeeeeeecc
Confidence            699999999899999999999998888999999999999999999999999987 68889988633             2


Q ss_pred             cccceeeeEEeCCccCCCCCCchhhcccccccccc
Q 047215          364 SSKIETLWIQLGPDTAVGAAGTDALLNGLEIFKFS  398 (851)
Q Consensus       364 ~~~~~~l~~s~~~~~~~~~~~~~~~lng~Ei~~~~  398 (851)
                      .++.  |+|.+.|..     ..+|+|||+||++..
T Consensus       145 ~~g~--L~I~f~p~~-----~~~a~inaIEI~~~~  172 (174)
T 2jwp_A          145 FTGK--LSVEFVKGY-----YDNPKVCALFIMKGT  172 (174)
T ss_dssp             CCSE--EEEEEECSS-----SCSSSEEEEEEESSC
T ss_pred             cCCe--EEEEEeccC-----CCCcEEEEEEEEeCc
Confidence            3343  558888642     258999999999864

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.91  E-value=5.1e-25  Score=257.24  Aligned_cols=183  Identities=19%  Similarity=0.171  Sum_probs=142.5

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCCh--------hhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSE--------QGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .++||+|+||.||+|+.. +..+++|+......        ...+.+.+|+++|++++||||+++..++...+..+||||
T Consensus       341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE  419 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS  419 (540)
T ss_dssp             -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred             CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence            457999999999999654 45667776433211        123458999999999999999976666667778899999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+++++|.+++..          +..++.|+++||.|||+   ++|+||||||+|||++.  .+||+|||+++.......
T Consensus       420 ~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~  484 (540)
T 3en9_A          420 YINGKLAKDVIED----------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED  484 (540)
T ss_dssp             CCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred             CCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence            9999999999854          66899999999999995   89999999999999999  999999999987543211


Q ss_pred             cc-----cccccccCCcccCcccccc--cCCCchHHHHHHHHHHHHHHhCCcCC
Q 047215          670 TH-----VSTAVKGSFGYLDPEYFWR--QQLTEKSDVYSFGVVLFEVVCARAVI  716 (851)
Q Consensus       670 ~~-----~~~~~~gt~~y~aPE~~~~--~~~t~ksDVwS~GvvL~eLltG~~p~  716 (851)
                      ..     ......||+.|||||++..  ..|+..+|+|+..+-.++-+.++.++
T Consensus       485 ~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          485 KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             cccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            11     1245679999999999986  67888899999999888887776544

>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*

Probab=99.89  E-value=1.9e-23  Score=206.52  Aligned_cols=153  Identities=22%  Similarity=0.275  Sum_probs=113.2

Q ss_pred             CceEEecCCCCccccCCcceeccCCCCCccccccCCcccccCCCCCCCCCcccccceeeeccCceeeEeec-cceEEEEE
Q 047215           23 KSFLINCGTNSSVNVDGRKWVGDLASNNNVTLSSSGIAATTDSLSGDSIYEPLYKTARVFADGLNYTFEII-AGNYIVRL  101 (851)
Q Consensus        23 ~~~~i~cG~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~R~f~~~~~y~~~~~-~g~~~~R~  101 (851)
                      ..|+||||++..++.+||+|.+|.........+..+... ... ......+++|+|||+|+...+|.|||. +|+|+|||
T Consensus         6 ~~~~INcGg~~~~d~~gr~w~~D~~~~~~g~~~~~~~~~-~~~-~~~~~~~~lY~TaR~~~~~~tY~f~v~~~G~Y~VrL   83 (174)
T 2jwp_A            6 VIWAVNAGGESHVDVHGIHYRKDPLEGRVGRASDYGMKL-PIL-RSNPEDQVLYQTERYNEDSFGYDIPIKEEGEYVLVL   83 (174)
T ss_dssp             EEEEEEETSSSEEETTTEEECSSCSSTTCCCCCCCCTTS-CCS-SSCHHHHHTTTCCCCCCSCEEEEEECCSCEEEEEEE
T ss_pred             EEEEEECCCCCccCCCCCEEcCCcCcccCCcccccccce-Eec-ccCCCCchhhhhhccCCCCeEEEEEeCCCeEEEEEE
Confidence            579999999888888999999994211000000000000 000 011122459999999999999999996 69999999


Q ss_pred             EeccCCCCCcccccceEEEEEcceEEeecCCCCccccccccccccCCCCCcccceEEEEEeec-------------cCCe
Q 047215          102 HFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLGV-------------DLDK  168 (851)
Q Consensus       102 ~f~~~~~~~~~~~~~~f~v~~~g~~~l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-------------~~~~  168 (851)
                      |||++.+.+  ...+.|||++||++++++|+....         + ++   ..++.++|.+.+             .++.
T Consensus        84 hF~ei~~~~--~~~rvFdV~ing~~~l~~fdi~~~---------a-g~---~~~~~~~~~~~v~~~~l~i~~~~~~~~g~  148 (174)
T 2jwp_A           84 KFAEVYFAQ--SQQKVFDVRVNGHTVVKDLDIFDR---------V-GH---STAHDEIIPISIKKGKLSVQGEVSTFTGK  148 (174)
T ss_dssp             EEECCSCCC--SSSSCEEEEETTEEEEEEECHHHH---------H-SS---SSCEEEEEEEEEETTEEEETTEEEECCSE
T ss_pred             EEeccccCC--CCCeEeEEEECCEEeecCcCHHHh---------h-CC---CeeEEEEEEEEEecCceeeeeeecccCCe
Confidence            999999986  788999999999999999997411         1 11   347888888764             3448


Q ss_pred             EEEEEecCCCcceeeeeeEEEecc
Q 047215          169 LMIEFIPSKGSFGFINAIEIVPVV  192 (851)
Q Consensus       169 ~~i~f~~~~~~~~fi~~iEl~~~~  192 (851)
                      |+|+|.|.....||||||||++.+
T Consensus       149 L~I~f~p~~~~~a~inaIEI~~~~  172 (174)
T 2jwp_A          149 LSVEFVKGYYDNPKVCALFIMKGT  172 (174)
T ss_dssp             EEEEEECSSSCSSSEEEEEEESSC
T ss_pred             EEEEEeccCCCCcEEEEEEEEeCc
Confidence            999999987889999999999865

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.86  E-value=8.1e-22  Score=211.18  Aligned_cols=153  Identities=16%  Similarity=0.068  Sum_probs=122.2

Q ss_pred             HHHHHHHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCCh------------------hhHHHHHHHHHHHHhc
Q 047215          505 LAEIRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSE------------------QGLAEFETEIEMLSKL  566 (851)
Q Consensus       505 ~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~------------------~~~~~~~~Ei~~l~~l  566 (851)
                      +..+......|...+.||+|+||.||+|+..+++.+|+|.+.....                  .....+.+|+.+++++
T Consensus        82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l  161 (282)
T 1zar_A           82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL  161 (282)
T ss_dssp             HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence            3344445566778899999999999999997788999999864321                  1356789999999999


Q ss_pred             CCcceeeEEEEEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeE
Q 047215          567 RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL  646 (851)
Q Consensus       567 ~HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NIL  646 (851)
                      +|   +++.+++.. +..++||||+++|+|.+ +.        ..+...++.|++.||.|||+   .+|+||||||+|||
T Consensus       162 ~~---~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~--------~~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NIL  225 (282)
T 1zar_A          162 QG---LAVPKVYAW-EGNAVLMELIDAKELYR-VR--------VENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVL  225 (282)
T ss_dssp             TT---SSSCCEEEE-ETTEEEEECCCCEEGGG-CC--------CSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEE
T ss_pred             cC---CCcCeEEec-cceEEEEEecCCCcHHH-cc--------hhhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEE
Confidence            94   555554433 56699999999999988 42        13455799999999999995   99999999999999


Q ss_pred             EcCCCeEEEeeccccccCCCCCccccccccccCCcccCccccc
Q 047215          647 LDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW  689 (851)
Q Consensus       647 ld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~  689 (851)
                      ++ ++.+||+|||+++.               +..++|||++.
T Consensus       226 l~-~~~vkl~DFG~a~~---------------~~~~~a~e~l~  252 (282)
T 1zar_A          226 VS-EEGIWIIDFPQSVE---------------VGEEGWREILE  252 (282)
T ss_dssp             EE-TTEEEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred             EE-CCcEEEEECCCCeE---------------CCCCCHHHHHH
Confidence            99 99999999999864               33578899874

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.73  E-value=1.3e-17  Score=176.09  Aligned_cols=136  Identities=18%  Similarity=0.143  Sum_probs=106.4

Q ss_pred             CceeeeeeeecceEEEEEEE-cCcce--eEEeecCCCCh------------------------hhHHHHHHHHHHHHhcC
Q 047215          515 FDESLMIGVGGFGKVFKGEI-EDCTL--AAIKRANPQSE------------------------QGLAEFETEIEMLSKLR  567 (851)
Q Consensus       515 f~~~~~LG~G~fG~Vykg~~-~~~~~--vavK~~~~~~~------------------------~~~~~~~~Ei~~l~~l~  567 (851)
                      |...+.||+|+||.||+|.. .++..  +|||+......                        .....+.+|+.+|.+++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            56778999999999999997 67888  99998644311                        11236889999999998


Q ss_pred             Ccce--eeEEEEEccCCcEEEEEEecCC-c----chhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCC
Q 047215          568 HRHL--VSLIGFCDEQNEMILVYEYMAN-G----TLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDV  640 (851)
Q Consensus       568 HpnI--v~l~g~~~~~~~~~lV~Ey~~~-g----sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDl  640 (851)
                      |+++  ..++++    +..+|||||+.+ |    +|.+++..     .++.++..++.|++.+|.|||.  ..+|+||||
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDl  197 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQ--EAELVHADL  197 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSC
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCC
Confidence            8754  344443    356899999942 4    56555421     3466788999999999999993  389999999


Q ss_pred             CCCCeEEcCCCeEEEeecccccc
Q 047215          641 KTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       641 k~~NILld~~~~~kl~DFGla~~  663 (851)
                      ||+|||++.  .++|+|||++..
T Consensus       198 kp~NILl~~--~~~liDFG~a~~  218 (258)
T 1zth_A          198 SEYNIMYID--KVYFIDMGQAVT  218 (258)
T ss_dssp             STTSEEESS--SEEECCCTTCEE
T ss_pred             CHHHEEEcC--cEEEEECccccc
Confidence            999999998  999999999875

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.55  E-value=6.3e-15  Score=162.32  Aligned_cols=135  Identities=16%  Similarity=0.112  Sum_probs=99.9

Q ss_pred             CCceeeeeeeecceEEEEEEEcCcceeEEeecCCCCh--------------hhHH--------HHHHHHHHHHhcCCcce
Q 047215          514 NFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSE--------------QGLA--------EFETEIEMLSKLRHRHL  571 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~--------------~~~~--------~~~~Ei~~l~~l~HpnI  571 (851)
                      -|.+.+.||+|+||.||+|...+|+.+|||+.+....              ....        ...+|...|.++.+.++
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            3888999999999999999998999999997643210              0011        12346667777755443


Q ss_pred             e--eEEEEEccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC
Q 047215          572 V--SLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE  649 (851)
Q Consensus       572 v--~l~g~~~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~  649 (851)
                      .  ..+++.    ..+|||||+++++|.+++.        ......++.|++.+|.|||.   .+||||||||.|||+++
T Consensus       176 ~vp~p~~~~----~~~LVME~i~G~~L~~l~~--------~~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~  240 (397)
T 4gyi_A          176 PVPEPIAQS----RHTIVMSLVDALPMRQVSS--------VPDPASLYADLIALILRLAK---HGLIHGDFNEFNILIRE  240 (397)
T ss_dssp             SCCCEEEEE----TTEEEEECCSCEEGGGCCC--------CSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEE
T ss_pred             CCCeeeecc----CceEEEEecCCccHhhhcc--------cHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeC
Confidence            2  223322    3379999999999876642        12446788999999999995   89999999999999987


Q ss_pred             CC----------eEEEeecccccc
Q 047215          650 NF----------VAKMSDFGLSKT  663 (851)
Q Consensus       650 ~~----------~~kl~DFGla~~  663 (851)
                      ++          .+.|+||+-+..
T Consensus       241 dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          241 EKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             EECSSCTTSEEEEEEECCCTTCEE
T ss_pred             CCCcccccccccceEEEEeCCccc
Confidence            76          489999997653

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.19  E-value=8e-11  Score=123.90  Aligned_cols=144  Identities=15%  Similarity=0.055  Sum_probs=113.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      -..|.....++.|+.+.||+.... +..+++|+...........+.+|+++++.+. |..+.++++++...+..++||||
T Consensus        13 l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~   91 (263)
T 3tm0_A           13 IEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE   91 (263)
T ss_dssp             HTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred             hccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence            356877888888899999999855 5678999876532122346889999999994 67788999999888899999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCC---------------------------------------
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA---------------------------------------  631 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~---------------------------------------  631 (851)
                      ++|.+|.+.+.       +..+...++.+++++|..||+..                                       
T Consensus        92 i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (263)
T 3tm0_A           92 ADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPF  164 (263)
T ss_dssp             CSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSS
T ss_pred             cCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccC
Confidence            99999987641       12344578889999999999711                                       


Q ss_pred             -----------------CCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          632 -----------------ERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       632 -----------------~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                                       ...++|+|+++.|||++++..+.|+||+.+..
T Consensus       165 ~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          165 KDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             SSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             CCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                             14589999999999998766677999997653

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.05  E-value=3.7e-10  Score=118.15  Aligned_cols=137  Identities=18%  Similarity=0.126  Sum_probs=101.1

Q ss_pred             CCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcc--eeeEEEEEccCCcEEEEEEec
Q 047215          514 NFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRH--LVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~Hpn--Iv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      ++....+.+.|..+.||+....++..+++|.....   ....+.+|+.+++.+.+.+  +.+++++...++..++||||+
T Consensus        21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i   97 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV   97 (264)
T ss_dssp             TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred             CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence            34443333355569999998777778899987654   2245788999999996545  456888888888899999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCC----------------------------------------
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA----------------------------------------  631 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~----------------------------------------  631 (851)
                      ++.+|.  ...     .   ....++.++++.|..||+..                                        
T Consensus        98 ~G~~l~--~~~-----~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (264)
T 1nd4_A           98 PGQDLL--SSH-----L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP  167 (264)
T ss_dssp             SSEETT--TSC-----C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred             CCcccC--cCc-----C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence            998884  211     1   22367788888888888622                                        


Q ss_pred             ---------------CCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          632 ---------------ERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       632 ---------------~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                                     ...++|+|++|.|||++++..+.|+|||.+..
T Consensus       168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          168 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                           12399999999999998876678999998754

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.91  E-value=4.4e-09  Score=116.02  Aligned_cols=142  Identities=16%  Similarity=0.235  Sum_probs=107.2

Q ss_pred             eeeeeeeecceEEEEEEEcCcceeEEeecC--CCC-hhhHHHHHHHHHHHHhcC--CcceeeEEEEEccC---CcEEEEE
Q 047215          517 ESLMIGVGGFGKVFKGEIEDCTLAAIKRAN--PQS-EQGLAEFETEIEMLSKLR--HRHLVSLIGFCDEQ---NEMILVY  588 (851)
Q Consensus       517 ~~~~LG~G~fG~Vykg~~~~~~~vavK~~~--~~~-~~~~~~~~~Ei~~l~~l~--HpnIv~l~g~~~~~---~~~~lV~  588 (851)
                      ..+.|+.|.++.||+....+ ..+++|+..  ... ......+.+|+.+++.|.  +..+.++++++...   +..++||
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            45678999999999998765 456777765  322 123456888999999997  45688999999776   4589999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCC-------------------------------------
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA-------------------------------------  631 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~-------------------------------------  631 (851)
                      ||+++..+.+..    ...++..++..++.++++.|..||+..                                     
T Consensus       121 e~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (359)
T 3dxp_A          121 EFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA  196 (359)
T ss_dssp             ECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred             EecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence            999998875422    234678888999999999999999621                                     


Q ss_pred             ------------------CCCeEEcCCCCCCeEEcCCC--eEEEeecccccc
Q 047215          632 ------------------ERGIIHRDVKTTNILLDENF--VAKMSDFGLSKT  663 (851)
Q Consensus       632 ------------------~~~iiHrDlk~~NILld~~~--~~kl~DFGla~~  663 (851)
                                        ...++|+|+++.|||++.++  .+.|+||+.+..
T Consensus       197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                              25799999999999998765  368999999875

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.79  E-value=4.5e-09  Score=113.19  Aligned_cols=187  Identities=16%  Similarity=0.157  Sum_probs=122.3

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcC-Ccc--eeeEEEEEccCC---cEEEEEEec
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRH--LVSLIGFCDEQN---EMILVYEYM  591 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-Hpn--Iv~l~g~~~~~~---~~~lV~Ey~  591 (851)
                      .+.++.|....||+..    ..+++|+...  ......+.+|.++|+.+. +..  +.+++..+...+   ..++|||++
T Consensus        25 i~~~~~G~~n~v~~v~----~~~vlR~~~~--~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN----RDFIFKFPKH--SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI   98 (304)
T ss_dssp             CCEEEECSSEEEEEST----TSEEEEEESS--HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred             eEecCCCCcceEEEEC----CEEEEEecCC--cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence            3468999999999864    4567777543  234567899999999883 332  445555554433   348999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcC-----------------------------------------
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG-----------------------------------------  630 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~-----------------------------------------  630 (851)
                      +|.+|.+...    ..++..++..++.++++.|..||+.                                         
T Consensus        99 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  174 (304)
T 3sg8_A           99 KGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD  174 (304)
T ss_dssp             CCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred             CCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence            9988875432    2356777788888888888888851                                         


Q ss_pred             --------------CCCCeEEcCCCCCCeEEcC--CCeEEEeeccccccCCCCCcccccc------------ccccCCcc
Q 047215          631 --------------AERGIIHRDVKTTNILLDE--NFVAKMSDFGLSKTGPSMEHTHVST------------AVKGSFGY  682 (851)
Q Consensus       631 --------------~~~~iiHrDlk~~NILld~--~~~~kl~DFGla~~~~~~~~~~~~~------------~~~gt~~y  682 (851)
                                    ....++|+|+++.||++++  ...+.|+||+.+........-....            ......+.
T Consensus       175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~  254 (304)
T 3sg8_A          175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH  254 (304)
T ss_dssp             HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred             HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence                          1135899999999999988  5668999999987533211000000            00000011


Q ss_pred             cC-cccccccCCCchHHHHHHHHHHHHHHhCCcCC
Q 047215          683 LD-PEYFWRQQLTEKSDVYSFGVVLFEVVCARAVI  716 (851)
Q Consensus       683 ~a-PE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~  716 (851)
                      .. |+....  .....+.|+++.+++.+.+|..++
T Consensus       255 ~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          255 KDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             SCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             CCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence            22 232211  123468999999999999997543

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.25  E-value=8.6e-06  Score=87.51  Aligned_cols=136  Identities=16%  Similarity=0.121  Sum_probs=95.4

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCc---ceeeEEEEEc-cCCcEEEEEEecCC
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHR---HLVSLIGFCD-EQNEMILVYEYMAN  593 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~Hp---nIv~l~g~~~-~~~~~~lV~Ey~~~  593 (851)
                      .+.++.|....||+.    +..+++|+..  .......+.+|.++|+.|.+.   .+.+.+.++. ..+..++|||+++|
T Consensus        24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            456888888899987    4556777742  334456789999999999642   3566777763 45667899999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcC-------------------------------------------
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG-------------------------------------------  630 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~-------------------------------------------  630 (851)
                      ..|.+...    ..++..+...++.++++.|..||+.                                           
T Consensus        98 ~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~  173 (306)
T 3tdw_A           98 QILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT  173 (306)
T ss_dssp             EECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred             eECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence            88876321    1234445555566666666655531                                           


Q ss_pred             --------------CCCCeEEcCCCCCCeEEcC---CCe-EEEeecccccc
Q 047215          631 --------------AERGIIHRDVKTTNILLDE---NFV-AKMSDFGLSKT  663 (851)
Q Consensus       631 --------------~~~~iiHrDlk~~NILld~---~~~-~kl~DFGla~~  663 (851)
                                    ....++|+|+++.|||++.   ++. +.|+||+.+..
T Consensus       174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                          1235799999999999987   344 58999998765

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.22  E-value=5.9e-06  Score=86.75  Aligned_cols=135  Identities=17%  Similarity=0.118  Sum_probs=96.8

Q ss_pred             eeeeecce-EEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEEEEEecCCcch
Q 047215          520 MIGVGGFG-KVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILVYEYMANGTL  596 (851)
Q Consensus       520 ~LG~G~fG-~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~lV~Ey~~~gsL  596 (851)
                      .+..|..| .||+-... ++..+++|+....   ...++.+|...|+.+. +--+.++++++..++..++|||++++.++
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence            35556555 68987654 4456788875432   3457888999999884 43467888999888999999999999887


Q ss_pred             hhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcC----------------------------------------------
Q 047215          597 RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG----------------------------------------------  630 (851)
Q Consensus       597 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~----------------------------------------------  630 (851)
                      .+....      .......++.+++..|.-||+.                                              
T Consensus       108 ~~~~~~------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (272)
T 4gkh_A          108 FQVLEE------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK  181 (272)
T ss_dssp             HHHHHH------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred             cccccC------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence            765421      1233445666677777777741                                              


Q ss_pred             ---------CCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          631 ---------AERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       631 ---------~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                               ....++|+|+.+.|||+++++.+-|+||+.+..
T Consensus       182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                     112379999999999999887778999998754

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.10  E-value=6.7e-06  Score=90.19  Aligned_cols=81  Identities=5%  Similarity=-0.052  Sum_probs=56.3

Q ss_pred             eeee-eeecceEEEEEEEc-------CcceeEEeecCCCC---hhhHHHHHHHHHHHHhcC-C--cceeeEEEEEccC--
Q 047215          518 SLMI-GVGGFGKVFKGEIE-------DCTLAAIKRANPQS---EQGLAEFETEIEMLSKLR-H--RHLVSLIGFCDEQ--  581 (851)
Q Consensus       518 ~~~L-G~G~fG~Vykg~~~-------~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~-H--pnIv~l~g~~~~~--  581 (851)
                      .+.| +.|....+|+....       ++..+++|+.....   ......+.+|+.+++.|. +  ..+.++++++...  
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            3567 78888999988765       25567777754322   101245778999999884 3  3567888888665  


Q ss_pred             -CcEEEEEEecCCcchhh
Q 047215          582 -NEMILVYEYMANGTLRS  598 (851)
Q Consensus       582 -~~~~lV~Ey~~~gsL~~  598 (851)
                       +..++||||+++..+.+
T Consensus       105 ~g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          105 LGTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             TSSCEEEEECCCCBCCCB
T ss_pred             cCCceEEEEecCCCChhh
Confidence             35789999999877654

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.66  E-value=0.00011  Score=81.90  Aligned_cols=75  Identities=19%  Similarity=0.127  Sum_probs=49.1

Q ss_pred             eeeeeeecceEEEEEEEc-CcceeEEeecCCCCh-------hhHHHHHHHHHHHHhcCC--cc-eeeEEEEEccCCcEEE
Q 047215          518 SLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSE-------QGLAEFETEIEMLSKLRH--RH-LVSLIGFCDEQNEMIL  586 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~-------~~~~~~~~Ei~~l~~l~H--pn-Iv~l~g~~~~~~~~~l  586 (851)
                      .+.||.|..+.||+++.. ++..+++|...+...       .....+..|.++|+.+.+  |. +.+++.+.  ....++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence            457999999999999754 456788887543211       123456789999988742  43 44555553  344689


Q ss_pred             EEEecCCc
Q 047215          587 VYEYMANG  594 (851)
Q Consensus       587 V~Ey~~~g  594 (851)
                      |||++++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999864

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.61  E-value=0.00034  Score=74.03  Aligned_cols=80  Identities=15%  Similarity=0.099  Sum_probs=59.5

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcC-C--cceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-H--RHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H--pnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ..+.....+|.|..+.||+.+..+|+.+++|+...........|..|...|+.|. .  --+.+.+++.    .-++|||
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e   90 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME   90 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred             CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEE
Confidence            3455667899999999999999999999999876554444456889999999884 2  2344556553    2378999


Q ss_pred             ecCCcch
Q 047215          590 YMANGTL  596 (851)
Q Consensus       590 y~~~gsL  596 (851)
                      |++.+..
T Consensus        91 ~l~~~~~   97 (288)
T 3f7w_A           91 WVDERPP   97 (288)
T ss_dssp             CCCCCCC
T ss_pred             eecccCC
Confidence            9987643

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.57  E-value=0.00035  Score=75.51  Aligned_cols=141  Identities=17%  Similarity=0.170  Sum_probs=80.1

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcC-----CcceeeEE-E--EEccCCcEEEEEE
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-----HRHLVSLI-G--FCDEQNEMILVYE  589 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-----HpnIv~l~-g--~~~~~~~~~lV~E  589 (851)
                      .+.|+.|..+.||+....++. +++|+.... .   ..+..|..+++.|.     .|.++... |  +...++..+++||
T Consensus        37 ~~~l~gG~~n~~~~v~~~~~~-~vlk~~~~~-~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~  111 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTDSGA-VCLKRIHRP-E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD  111 (346)
T ss_dssp             EEECC----CEEEEEEETTEE-EEEEEECSC-H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred             eeeccccccCcEEEEEeCCCC-EEEEecCCC-H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence            345666778999999876665 788887652 2   33445566666553     24443311 1  1123567899999


Q ss_pred             ecCCcchh--------------hhccC--CCC--C--------CCchhhh------------------------------
Q 047215          590 YMANGTLR--------------SHLFG--SDL--P--------PLTWKQR------------------------------  613 (851)
Q Consensus       590 y~~~gsL~--------------~~L~~--~~~--~--------~l~~~~~------------------------------  613 (851)
                      |+++..+.              ..+|.  ...  +        ...|...                              
T Consensus       112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  191 (346)
T 2q83_A          112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE  191 (346)
T ss_dssp             CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred             eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence            99986542              01111  000  0        0122211                              


Q ss_pred             -HHHHHHHHHHHHHhhc----------CCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          614 -LDACIGAARGLHYLHT----------GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       614 -~~i~~~ia~gL~yLHs----------~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                       ..+...+.+++.+|+.          .....++|+|+++.|||++.++.+.|+||+.+..
T Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence             0111123345666652          1257899999999999998888999999998754

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.39  E-value=0.00074  Score=72.39  Aligned_cols=77  Identities=14%  Similarity=0.146  Sum_probs=60.3

Q ss_pred             ceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcC---CcceeeEEEEEccCCcEEEEEEecC
Q 047215          516 DESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR---HRHLVSLIGFCDEQNEMILVYEYMA  592 (851)
Q Consensus       516 ~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~~~~~~~~lV~Ey~~  592 (851)
                      ...+.|+.|....+|+.... +..+++|+....   ....+..|...|+.|.   ...+.++++++...+..++||||++
T Consensus        39 ~~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~  114 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN  114 (312)
T ss_dssp             CEEEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred             eeeEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence            34567899999999998864 456678876532   3567889999999884   3568889999888888999999999


Q ss_pred             Ccch
Q 047215          593 NGTL  596 (851)
Q Consensus       593 ~gsL  596 (851)
                      +..+
T Consensus       115 G~~~  118 (312)
T 3jr1_A          115 KSKN  118 (312)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8765

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.15  E-value=0.0012  Score=73.91  Aligned_cols=79  Identities=14%  Similarity=0.166  Sum_probs=47.6

Q ss_pred             CCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccccccc-ccCCcccCccccccc---CCCchHHHHHHHHHHH
Q 047215          632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV-KGSFGYLDPEYFWRQ---QLTEKSDVYSFGVVLF  707 (851)
Q Consensus       632 ~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~---~~t~ksDVwS~GvvL~  707 (851)
                      ...++|+|+++.|||++.++ ++|+||+.+......-.  ..... .-...|++|+.....   .-....++......+|
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D--la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD--IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW  307 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH--HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH--HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence            57899999999999998776 99999999876332110  00000 001235555544311   1122355567777777


Q ss_pred             HHHhCC
Q 047215          708 EVVCAR  713 (851)
Q Consensus       708 eLltG~  713 (851)
                      +.++++
T Consensus       308 ~~y~~~  313 (420)
T 2pyw_A          308 NLFNKR  313 (420)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            776653

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=96.85  E-value=0.0037  Score=66.99  Aligned_cols=158  Identities=14%  Similarity=0.125  Sum_probs=86.1

Q ss_pred             cCHHHHHHHhcCCce-----eeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcc--eeeEE
Q 047215          503 FTLAEIRVATNNFDE-----SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRH--LVSLI  575 (851)
Q Consensus       503 ~~~~~l~~~t~~f~~-----~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~Hpn--Iv~l~  575 (851)
                      ++.+++...-..|..     .+.|+.|....+|+....++ .+++|......  ....+..|+.+++.|...+  +.+++
T Consensus         7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~   83 (322)
T 2ppq_A            7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL   83 (322)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred             CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence            344455444444543     34566788889999987766 46788766521  1234566888877774222  23333


Q ss_pred             EE------EccCCcEEEEEEecCCcchhh--------------hccC--C--CCCC------CchhhhHH----------
Q 047215          576 GF------CDEQNEMILVYEYMANGTLRS--------------HLFG--S--DLPP------LTWKQRLD----------  615 (851)
Q Consensus       576 g~------~~~~~~~~lV~Ey~~~gsL~~--------------~L~~--~--~~~~------l~~~~~~~----------  615 (851)
                      ..      ....+..+++++|+++..+..              .+|.  .  ....      ..|.....          
T Consensus        84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~  163 (322)
T 2ppq_A           84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE  163 (322)
T ss_dssp             CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred             CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence            21      112356789999999865421              0111  0  0000      12322110          


Q ss_pred             --HHHHHHHHHHHhhc----CCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          616 --ACIGAARGLHYLHT----GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       616 --i~~~ia~gL~yLHs----~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                        +...+.+.++.|+.    .....++|+|+.+.|||++++..+.|+||+.+..
T Consensus       164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence              01113344555542    1245799999999999998876668999987653

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=96.66  E-value=0.0046  Score=69.35  Aligned_cols=73  Identities=18%  Similarity=0.168  Sum_probs=49.2

Q ss_pred             eeeeeeecceEEEEEEEcC--------cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcce-eeEEEEEccCCcEEEEE
Q 047215          518 SLMIGVGGFGKVFKGEIED--------CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHL-VSLIGFCDEQNEMILVY  588 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~--------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnI-v~l~g~~~~~~~~~lV~  588 (851)
                      .+.|+.|-...||+....+        +..+++|+......  ...+.+|..+++.|...++ .++++.+..    .+|+
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~  151 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  151 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence            4467888889999998753        35677777643211  1455679999988853333 567777653    3899


Q ss_pred             EecCCcch
Q 047215          589 EYMANGTL  596 (851)
Q Consensus       589 Ey~~~gsL  596 (851)
                      ||+++.+|
T Consensus       152 e~l~G~~l  159 (429)
T 1nw1_A          152 EYIPSRPL  159 (429)
T ss_dssp             CCCCEEEC
T ss_pred             EEeCCccc
Confidence            99987554

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=96.63  E-value=0.0052  Score=66.24  Aligned_cols=142  Identities=12%  Similarity=0.103  Sum_probs=72.9

Q ss_pred             eeeeeecceE-EEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCC--cceeeEEEEEccCCcEEEEEEecCCcc
Q 047215          519 LMIGVGGFGK-VFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRH--RHLVSLIGFCDEQNEMILVYEYMANGT  595 (851)
Q Consensus       519 ~~LG~G~fG~-Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H--pnIv~l~g~~~~~~~~~lV~Ey~~~gs  595 (851)
                      +.|+.|.... +|+....++..+++|.......   ..+..|+.+++.+..  -.+.+++.++...+  +++||++.+..
T Consensus        24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~   98 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL   98 (333)
T ss_dssp             CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred             eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence            3465555444 6676654355566665544321   234557777777642  23556777665444  78999987755


Q ss_pred             hhhhcc---------------------CCC---CCCCchhhhH-------H-------------HHHHHHHHHHHhh---
Q 047215          596 LRSHLF---------------------GSD---LPPLTWKQRL-------D-------------ACIGAARGLHYLH---  628 (851)
Q Consensus       596 L~~~L~---------------------~~~---~~~l~~~~~~-------~-------------i~~~ia~gL~yLH---  628 (851)
                      +.+.+.                     ...   .+.+......       .             ....+...+..|.   
T Consensus        99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~  178 (333)
T 3csv_A           99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ  178 (333)
T ss_dssp             HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence            543321                     111   1111110000       0             0001111222221   


Q ss_pred             cCCCCCeEEcCCCCCCeEEcCC----CeEEEeeccccccCC
Q 047215          629 TGAERGIIHRDVKTTNILLDEN----FVAKMSDFGLSKTGP  665 (851)
Q Consensus       629 s~~~~~iiHrDlk~~NILld~~----~~~kl~DFGla~~~~  665 (851)
                      ......++|||+.+.|||++.+    ..+.|+||+.+....
T Consensus       179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~  219 (333)
T 3csv_A          179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH  219 (333)
T ss_dssp             CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred             ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence            1124679999999999999874    689999999887643

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=96.56  E-value=0.0077  Score=66.24  Aligned_cols=140  Identities=18%  Similarity=0.180  Sum_probs=81.2

Q ss_pred             eeeeeecceEEEEEEEcC--------cceeEEeecCCCChhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEEEEE
Q 047215          519 LMIGVGGFGKVFKGEIED--------CTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~--------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      +.|..|-...+|+....+        +..+++|+.-. .........+|.++++.|. +.-..++++++..+    +|||
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g----~v~e  130 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPEG----RLEQ  130 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETTE----EEEE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCCc----cEEE
Confidence            356667788899988642        35667776532 2234566778999998884 32235677777642    9999


Q ss_pred             ecCCcchhhh-----------------ccCCC----CCCC-chhhhHHHHHHHH-------------------HHHHH--
Q 047215          590 YMANGTLRSH-----------------LFGSD----LPPL-TWKQRLDACIGAA-------------------RGLHY--  626 (851)
Q Consensus       590 y~~~gsL~~~-----------------L~~~~----~~~l-~~~~~~~i~~~ia-------------------~gL~y--  626 (851)
                      |+++..|...                 ||...    ..+. -|.++.+...++.                   ..+..  
T Consensus       131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~  210 (379)
T 3feg_A          131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR  210 (379)
T ss_dssp             CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred             EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence            9998665321                 11111    1111 2344444433321                   11222  


Q ss_pred             --hhc-CCCCCeEEcCCCCCCeEEcCC----CeEEEeecccccc
Q 047215          627 --LHT-GAERGIIHRDVKTTNILLDEN----FVAKMSDFGLSKT  663 (851)
Q Consensus       627 --LHs-~~~~~iiHrDlk~~NILld~~----~~~kl~DFGla~~  663 (851)
                        |.. .....++|+|+.+.|||++.+    +.+.++||..+..
T Consensus       211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence              221 123568999999999999876    7899999988754

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=96.54  E-value=0.0046  Score=65.70  Aligned_cols=71  Identities=13%  Similarity=0.097  Sum_probs=44.1

Q ss_pred             eeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcce-eeEEEEEccCCcEEEEEEec-CCcc
Q 047215          518 SLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHL-VSLIGFCDEQNEMILVYEYM-ANGT  595 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnI-v~l~g~~~~~~~~~lV~Ey~-~~gs  595 (851)
                      .+.|+.|....+|+.     ..+++|+....... ..+..+|+.+++.+...++ .++++++.+  .-++|+||+ ++.+
T Consensus        23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~~~~v~e~i~~g~~   94 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDPA--TGVMVTRYIAGAQT   94 (301)
T ss_dssp             CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTT--TCCEEEECCTTCEE
T ss_pred             eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEECC--CCEEEEeecCCCcc
Confidence            567889999999998     45677776543221 1223568888887743233 455655433  347899999 6555


Q ss_pred             h
Q 047215          596 L  596 (851)
Q Consensus       596 L  596 (851)
                      |
T Consensus        95 l   95 (301)
T 3dxq_A           95 M   95 (301)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=96.54  E-value=0.0076  Score=60.09  Aligned_cols=100  Identities=14%  Similarity=0.150  Sum_probs=64.6

Q ss_pred             CcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcccc
Q 047215          593 NGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHV  672 (851)
Q Consensus       593 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~  672 (851)
                      .-+|.+.|...+ .++++++++.+|.|.++.|.-+-.. ..+ ..+=+.+..|+|..+|.+...+ ..+.          
T Consensus        32 ~vSL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~-~~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~----------   97 (229)
T 2yle_A           32 ALSLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARR-RQP-RHRVRSAAQIRVWRDGAVTLAP-AADD----------   97 (229)
T ss_dssp             EEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT-TCC-CCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred             cccHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhc-ccC-CceecCCcceEEecCCceeccc-cccc----------
Confidence            347888885543 5799999999999999998876210 011 1233446899999999888764 1110          


Q ss_pred             ccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh
Q 047215          673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC  711 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt  711 (851)
                          .....+.+||... ...+.+.=|||+|++||.-+-
T Consensus        98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A           98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             -------------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred             ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence                0122467888763 456789999999999998763

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=96.41  E-value=0.015  Score=65.62  Aligned_cols=74  Identities=16%  Similarity=0.148  Sum_probs=47.3

Q ss_pred             eeeeeeecceEEEEEEEcC-cceeEEeecCCCChhhHHHHHHHHHHHHhcCCcce-eeEEEEEccCCcEEEEEEecCCcc
Q 047215          518 SLMIGVGGFGKVFKGEIED-CTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHL-VSLIGFCDEQNEMILVYEYMANGT  595 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnI-v~l~g~~~~~~~~~lV~Ey~~~gs  595 (851)
                      .+.|+.|-...+|+....+ +..+++|+....... .-+-.+|..+++.|...++ .++++.+..    .+||||+++.+
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~  187 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA  187 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence            4468888889999998765 356677765433211 1122579999998864444 467777742    25999999866


Q ss_pred             h
Q 047215          596 L  596 (851)
Q Consensus       596 L  596 (851)
                      |
T Consensus       188 l  188 (458)
T 2qg7_A          188 L  188 (458)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=96.31  E-value=0.016  Score=62.10  Aligned_cols=141  Identities=13%  Similarity=0.127  Sum_probs=81.5

Q ss_pred             eeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcc--eeeEEEE-----EccCCcEEEEEEec
Q 047215          519 LMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRH--LVSLIGF-----CDEQNEMILVYEYM  591 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~Hpn--Iv~l~g~-----~~~~~~~~lV~Ey~  591 (851)
                      ..|+ |....||+....++..+++|...... .....+..|..+++.|....  +.+++..     ...++..+++||++
T Consensus        32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i  109 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV  109 (328)
T ss_dssp             EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence            4566 88889999887777778899876432 12356677888888774222  3444433     11244568899999


Q ss_pred             CCcchhh----h----------cc----CCC---CCCCchhhh----------------------HHHHHHHHHHHHHhh
Q 047215          592 ANGTLRS----H----------LF----GSD---LPPLTWKQR----------------------LDACIGAARGLHYLH  628 (851)
Q Consensus       592 ~~gsL~~----~----------L~----~~~---~~~l~~~~~----------------------~~i~~~ia~gL~yLH  628 (851)
                      ++..+..    .          +|    ...   ....++...                      ...+..++..+.-+.
T Consensus       110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  189 (328)
T 1zyl_A          110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW  189 (328)
T ss_dssp             CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            8865421    0          11    000   111121110                      011111122222211


Q ss_pred             c-CCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          629 T-GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       629 s-~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      . .....++|+|+++.|||++ + .+.|+||+.+..
T Consensus       190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            1 1245689999999999999 4 899999998765

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=96.24  E-value=0.013  Score=64.24  Aligned_cols=74  Identities=14%  Similarity=0.111  Sum_probs=44.2

Q ss_pred             eeeeeeecceEEEEEEEcCc---------ceeEEeecCCCChhhHHHHHHHHHHHHhcCCcc-eeeEEEEEccCCcEEEE
Q 047215          518 SLMIGVGGFGKVFKGEIEDC---------TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRH-LVSLIGFCDEQNEMILV  587 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~---------~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~Hpn-Iv~l~g~~~~~~~~~lV  587 (851)
                      .+.|+.|....+|+....++         ..+++|+...... ...+...|..+++.+...+ ..++++...    -++|
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v  112 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRI  112 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEE
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEecC----CcEE
Confidence            34577788889999887542         4667776544322 2223467888888885333 346665542    2789


Q ss_pred             EEecCCcch
Q 047215          588 YEYMANGTL  596 (851)
Q Consensus       588 ~Ey~~~gsL  596 (851)
                      |||+++..+
T Consensus       113 ~e~i~G~~l  121 (369)
T 3c5i_A          113 EEWLYGDPL  121 (369)
T ss_dssp             EECCCSEEC
T ss_pred             EEEecCCcC
Confidence            999998654

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=95.21  E-value=0.039  Score=59.64  Aligned_cols=32  Identities=16%  Similarity=0.234  Sum_probs=28.3

Q ss_pred             CCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       632 ~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      ...++|+|+.+.||++++++.+.|+||+.+..
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            35699999999999999888899999988765

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=93.34  E-value=0.33  Score=53.93  Aligned_cols=74  Identities=12%  Similarity=0.057  Sum_probs=47.0

Q ss_pred             eeeeeeecceEEEEEEEcC--------cceeEEeecCCCChhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEEEE
Q 047215          518 SLMIGVGGFGKVFKGEIED--------CTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~--------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      .+.|..|-...+|+....+        +..+++++...... ..-+-.+|..+++.+. +.-..++++.+.    -++||
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~  149 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE  149 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence            3457677788899988753        45667777544322 2223367888888884 322345565443    27899


Q ss_pred             EecCCcch
Q 047215          589 EYMANGTL  596 (851)
Q Consensus       589 Ey~~~gsL  596 (851)
                      ||+++..|
T Consensus       150 efI~G~~l  157 (424)
T 3mes_A          150 EFIDGEPL  157 (424)
T ss_dssp             ECCCSEEC
T ss_pred             EEeCCccC
Confidence            99998765

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=87.46  E-value=2.2  Score=46.87  Aligned_cols=30  Identities=33%  Similarity=0.379  Sum_probs=25.1

Q ss_pred             CeEEcCCCCCCeEE------cCCCeEEEeecccccc
Q 047215          634 GIIHRDVKTTNILL------DENFVAKMSDFGLSKT  663 (851)
Q Consensus       634 ~iiHrDlk~~NILl------d~~~~~kl~DFGla~~  663 (851)
                      .++|+|+.+.|||+      +++..++++||..|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            36799999999999      4567899999988754

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=82.70  E-value=3.3  Score=41.08  Aligned_cols=115  Identities=8%  Similarity=0.103  Sum_probs=78.8

Q ss_pred             cCCcceeeEEEEEccCCcEEEEEEecCCc-chhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCC
Q 047215          566 LRHRHLVSLIGFCDEQNEMILVYEYMANG-TLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTN  644 (851)
Q Consensus       566 l~HpnIv~l~g~~~~~~~~~lV~Ey~~~g-sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~N  644 (851)
                      ..||+.++. .+-..++.+.+.|+.-+++ ++.. +     ..++...+++++.+|+....++++     =+|--|.|+|
T Consensus        42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i-----k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~N  109 (215)
T 4ann_A           42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I-----KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDE  109 (215)
T ss_dssp             SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G-----GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGG
T ss_pred             ccCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H-----HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecce
Confidence            368988877 4666666777777655432 2222 3     346778999999999888766653     5788899999


Q ss_pred             eEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCC
Q 047215          645 ILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVI  716 (851)
Q Consensus       645 ILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~  716 (851)
                      ++++.++.+++.-.|+-...+                   |.     .+++..=.-.+=+++..+++++..|
T Consensus       110 L~f~~~~~p~i~~RGik~~l~-------------------P~-----~~~ee~fL~qyKAliiall~~K~~F  157 (215)
T 4ann_A          110 LFFTRDGLPIAKTRGLQNVVD-------------------PL-----PVSEAEFLTRYKALVICAFNEKQSF  157 (215)
T ss_dssp             EEECTTSCEEESCCEETTTBS-------------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCH
T ss_pred             EEEcCCCCEEEEEccCccCCC-------------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCH
Confidence            999999999999888744322                   21     1222233345667888888887655

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	851
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	6e-72
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-64
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-63
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-63
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-62
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-61
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-61
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-61
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	6e-61
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-60
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-60
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-60
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-59
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-59
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	7e-59
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	9e-59
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-58
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-58
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	7e-58
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-57
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-57
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-56
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-56
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-56
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-55
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	8e-55
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	7e-53
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-52
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-52
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-52
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-52
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-50
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-50
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	8e-50
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-47
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-45
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-44
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-44
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-44
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-43
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	5e-43
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	6e-43
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-42
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-42
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-42
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-42
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	7e-42
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	9e-42
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-41
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	5e-41
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	9e-41
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	8e-39
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-38
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	5e-38
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-37
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-36
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-35
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-33
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-32
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	4e-30
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-29
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-24
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-16

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  235 bits (601), Expect = 6e-72
 Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 19/273 (6%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           IG G FG V+KG+        +      + Q L  F+ E+ +L K RH +++  +G+   
Sbjct: 16  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75

Query: 581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDV 640
             ++ +V ++    +L  HL   +       + +D     A+G+ YLH    + IIHRD+
Sbjct: 76  -PQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 130

Query: 641 KTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ---LTEKS 697
           K+ NI L E+   K+ DFGL+        +H    + GS  ++ PE    Q     + +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190

Query: 698 DVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESL 757
           DVY+FG+VL+E++  +      LP   IN  D  +    +  L   +             
Sbjct: 191 DVYAFGIVLYELMTGQ------LPYSNINNRDQIIFMVGRGYLSPDLSK-----VRSNCP 239

Query: 758 EKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
           +    +  +CL  +   RP   ++L  +E + +
Sbjct: 240 KAMKRLMAECLKKKRDERPLFPQILASIELLAR 272

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  215 bits (549), Expect = 3e-64
 Identities = 68/305 (22%), Positives = 126/305 (41%), Gaps = 36/305 (11%)

Query: 503 FTLAEIRVATNNFDESL---------MIGVGGFGKVFKGEI----EDCTLAAIKRANPQ- 548
           FT  +   A   F + +         +IG G FG+V  G +    +     AIK      
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 549 SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPL 608
           +E+   +F +E  ++ +  H +++ L G   +   ++++ E+M NG+L       +    
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD-SFLRQNDGQF 125

Query: 609 TWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME 668
           T  Q +    G A G+ YL        +HRD+   NIL++ N V K+SDFGLS+      
Sbjct: 126 TVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 182

Query: 669 HTHVSTAV---KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI 725
                T+    K    +  PE    ++ T  SDV+S+G+V++EV+          P   +
Sbjct: 183 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG-----ERPYWDM 237

Query: 726 NLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHL 785
              D              I+   +     +      ++   C   +  +RP  G+++  L
Sbjct: 238 TNQDVINA----------IEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 287

Query: 786 EYVLQ 790
           + +++
Sbjct: 288 DKMIR 292

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  213 bits (544), Expect = 1e-63
 Identities = 66/292 (22%), Positives = 128/292 (43%), Gaps = 27/292 (9%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           IG G FG+V++G+       A+K  + + E+     E EI     LRH +++  I   ++
Sbjct: 11  IGKGRFGEVWRGKWRG-EEVAVKIFSSREERSW-FREAEIYQTVMLRHENILGFIAADNK 68

Query: 581 QN----EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA----- 631
            N    ++ LV +Y  +G+L  +L       +T +  +   +  A GL +LH        
Sbjct: 69  DNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQG 125

Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT--HVSTAVKGSFGYLDPEYFW 689
           +  I HRD+K+ NIL+ +N    ++D GL+    S   T         G+  Y+ PE   
Sbjct: 126 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD 185

Query: 690 RQ------QLTEKSDVYSFGVVLFEVVCARAVINPTL----PKDQINLADWAMKWQKQRS 739
                   +  +++D+Y+ G+V +E+    ++         P   +  +D +++  ++  
Sbjct: 186 DSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV 245

Query: 740 LKSIIDPHLKGNY-SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
            +  + P++   + S E+L    +I  +C    G  R T   +   L  + Q
Sbjct: 246 CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  211 bits (537), Expect = 4e-63
 Identities = 74/274 (27%), Positives = 121/274 (44%), Gaps = 28/274 (10%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC-D 579
           IG G FG V  G+       A+K     +      F  E  ++++LRH +LV L+G   +
Sbjct: 15  IGKGEFGDVMLGDYRG-NKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 71

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
           E+  + +V EYMA G+L  +L       L     L   +     + YL        +HRD
Sbjct: 72  EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 128

Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDV 699
           +   N+L+ E+ VAK+SDFGL+K   S + T      K    +  PE    ++ + KSDV
Sbjct: 129 LAARNVLVSEDNVAKVSDFGLTKEASSTQDT-----GKLPVKWTAPEALREKKFSTKSDV 183

Query: 700 YSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEK 759
           +SFG++L+E+          +P  +I L D   + +K                 P     
Sbjct: 184 WSFGILLWEIYSFG-----RVPYPRIPLKDVVPRVEKGY------KMDAPDGCPPA---- 228

Query: 760 FGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE 793
             E+ + C   +   RP+  ++   LE+ ++ HE
Sbjct: 229 VYEVMKNCWHLDAAMRPSFLQLREQLEH-IKTHE 261

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  210 bits (535), Expect = 1e-62
 Identities = 70/266 (26%), Positives = 114/266 (42%), Gaps = 21/266 (7%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           +G G FG+V+ G     T  A+K    Q       F  E  ++ +L+H+ LV L      
Sbjct: 21  LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-T 78

Query: 581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDV 640
           Q  + ++ EYM NG+L   L       LT  + LD     A G+ ++    ER  IHRD+
Sbjct: 79  QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135

Query: 641 KTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           +  NIL+ +    K++DFGL++     E+       K    +  PE       T KSDV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVW 194

Query: 701 SFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKF 760
           SFG++L E+V    +  P +   ++            ++L+         N   E     
Sbjct: 195 SFGILLTEIVTHGRIPYPGMTNPEV-----------IQNLERGYRMVRPDNCPEE----L 239

Query: 761 GEIAEKCLDDEGKNRPTMGEVLWHLE 786
            ++   C  +  ++RPT   +   LE
Sbjct: 240 YQLMRLCWKERPEDRPTFDYLRSVLE 265

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  208 bits (530), Expect = 2e-61
 Identities = 78/285 (27%), Positives = 137/285 (48%), Gaps = 29/285 (10%)

Query: 514 NFDESLMIGVGGFGKVFKGEIED----CTLAAIKRANPQSEQG-LAEFETEIEMLSKLRH 568
           +F+E  +IG G FG V+ G + D        A+K  N  ++ G +++F TE  ++    H
Sbjct: 30  HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87

Query: 569 RHLVSLIGFC-DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYL 627
            +++SL+G C   +   ++V  YM +G LR+ +      P T K  +   +  A+G+ +L
Sbjct: 88  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL 146

Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK--TGPSMEHTHVSTAVKGSFGYLDP 685
            +   +  +HRD+   N +LDE F  K++DFGL++       +  H  T  K    ++  
Sbjct: 147 AS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 203

Query: 686 EYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID 745
           E    Q+ T KSDV+SFGV+L+E++          P   +N  D  +   + R L     
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMTRG-----APPYPDVNTFDITVYLLQGRRL----- 253

Query: 746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
             L+  Y P+ L    E+  KC   + + RP+  E++  +  +  
Sbjct: 254 --LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVSRISAIFS 293

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  208 bits (529), Expect = 2e-61
 Identities = 75/315 (23%), Positives = 131/315 (41%), Gaps = 47/315 (14%)

Query: 505 LAEIRVATNNFDESLMIGVGGFGKVFKGE------IEDCTLAAIKRANPQ-SEQGLAEFE 557
           L  +    NN +    IG G FG+VF+         E  T+ A+K    + S    A+F+
Sbjct: 5   LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ 64

Query: 558 TEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDL------------ 605
            E  ++++  + ++V L+G C     M L++EYMA G L   L                 
Sbjct: 65  REAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 124

Query: 606 ----------PPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKM 655
                     PPL+  ++L      A G+ YL    ER  +HRD+ T N L+ EN V K+
Sbjct: 125 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKI 181

Query: 656 SDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAV 715
           +DFGLS+   S ++            ++ PE  +  + T +SDV+++GVVL+E+      
Sbjct: 182 ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 241

Query: 716 INPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNR 775
               +  +++              +  + D ++        LE    +   C      +R
Sbjct: 242 PYYGMAHEEV--------------IYYVRDGNILACPENCPLE-LYNLMRLCWSKLPADR 286

Query: 776 PTMGEVLWHLEYVLQ 790
           P+   +   L+ + +
Sbjct: 287 PSFCSIHRILQRMCE 301

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  205 bits (523), Expect = 4e-61
 Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 21/278 (7%)

Query: 513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLV 572
           +       IG G FG V  G   +    AIK           +F  E E++ KL H  LV
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLV 63

Query: 573 SLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
            L G C EQ  + LV+E+M +G L  +   +       +  L  C+    G+ YL    E
Sbjct: 64  QLYGVCLEQAPICLVFEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLE---E 119

Query: 633 RGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
             +IHRD+   N L+ EN V K+SDFG+++     ++T  ST  K    +  PE F   +
Sbjct: 120 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSR 178

Query: 693 LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY 752
            + KSDV+SFGV+++EV     +        ++         +   +   +  P L    
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV--------VEDISTGFRLYKPRL---A 227

Query: 753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
           S        +I   C  +  ++RP    +L  L  + +
Sbjct: 228 STH----VYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  205 bits (522), Expect = 6e-61
 Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 21/274 (7%)

Query: 513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLV 572
            +      +G G FG V  G+       AIK     S     EF  E +++  L H  LV
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62

Query: 573 SLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
            L G C +Q  + ++ EYMANG L ++L          +Q L+ C      + YL +   
Sbjct: 63  QLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLES--- 118

Query: 633 RGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
           +  +HRD+   N L+++  V K+SDFGLS+     E+T  S   K    +  PE     +
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMYSK 177

Query: 693 LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY 752
            + KSD+++FGV+++E+          +P ++   ++ A            I   L+   
Sbjct: 178 FSSKSDIWAFGVLMWEIYSLG-----KMPYERFTNSETAEH----------IAQGLRLYR 222

Query: 753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
              + EK   I   C  ++   RPT   +L ++ 
Sbjct: 223 PHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 256

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  205 bits (522), Expect = 1e-60
 Identities = 61/279 (21%), Positives = 117/279 (41%), Gaps = 21/279 (7%)

Query: 513 NNFDESLMIGVGGFGKVFKGEIEDC-TLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHL 571
            +      +G G +G+V++G  +      A+K     + + + EF  E  ++ +++H +L
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 75

Query: 572 VSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
           V L+G C  +    ++ E+M  G L  +L   +   ++    L      +  + YL    
Sbjct: 76  VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--- 132

Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ 691
           ++  IHRD+   N L+ EN + K++DFGLS+     +        K    +  PE     
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 191

Query: 692 QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN 751
           + + KSDV++FGV+L+E+        P +   Q+                 +++   +  
Sbjct: 192 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---------------YELLEKDYRME 236

Query: 752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                 EK  E+   C      +RP+  E+    E + Q
Sbjct: 237 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  204 bits (521), Expect = 2e-60
 Identities = 63/286 (22%), Positives = 118/286 (41%), Gaps = 26/286 (9%)

Query: 507 EIRVATNNFD-ESLMIGVGGFGKVFKGEI---EDCTLAAIKRANPQSEQG-LAEFETEIE 561
           ++ +  +N     + +G G FG V +G     +     AIK     +E+    E   E +
Sbjct: 2   KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ 61

Query: 562 MLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAA 621
           ++ +L + ++V LIG C +   ++LV E    G L   L G     +      +     +
Sbjct: 62  IMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVS 119

Query: 622 RGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK-TGPSMEHTHVSTAVKGSF 680
            G+ YL     +  +HRD+   N+LL     AK+SDFGLSK  G    +    +A K   
Sbjct: 120 MGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 176

Query: 681 GYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL 740
            +  PE    ++ + +SDV+S+GV ++E +          P  ++   +     ++ + +
Sbjct: 177 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ-----KPYKKMKGPEVMAFIEQGKRM 231

Query: 741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
           +            PE   +   +   C   + ++RP    V   + 
Sbjct: 232 E----------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 267

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  205 bits (522), Expect = 4e-60
 Identities = 60/306 (19%), Positives = 117/306 (38%), Gaps = 37/306 (12%)

Query: 508 IRVATNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGL-AEFETEIEMLSK 565
           + +  ++F++   +G G  G VFK        + A K  + + +  +  +   E+++L +
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60

Query: 566 LRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLH 625
               ++V   G      E+ +  E+M  G+L   L  +    +  +      I   +GL 
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLT 118

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDP 685
           YL    +  I+HRDVK +NIL++     K+ DFG+S          ++ +  G+  Y+ P
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSP 172

Query: 686 EYFWRQQLTEKSDVYSFGVVLFEVVCAR-----------------------AVINPTLPK 722
           E       + +SD++S G+ L E+   R                       A   P    
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRT 232

Query: 723 DQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIA----EKCLDDEGKNRPTM 778
               L+ + M  +   ++  ++D  +           F         KCL      R  +
Sbjct: 233 PGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADL 292

Query: 779 GEVLWH 784
            +++ H
Sbjct: 293 KQLMVH 298

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (510), Expect = 5e-59
 Identities = 75/266 (28%), Positives = 115/266 (43%), Gaps = 21/266 (7%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE 580
           +G G FG+V+ G     T  AIK   P        F  E +++ KLRH  LV L      
Sbjct: 25  LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 82

Query: 581 QNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDV 640
           +  + +V EYM+ G+L   L G     L   Q +D     A G+ Y+        +HRD+
Sbjct: 83  EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 139

Query: 641 KTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVY 700
           +  NIL+ EN V K++DFGL++     E+T      K    +  PE     + T KSDV+
Sbjct: 140 RAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPEAALYGRFTIKSDVW 198

Query: 701 SFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKF 760
           SFG++L E+     V  P +   ++                  ++   +    PE  E  
Sbjct: 199 SFGILLTELTTKGRVPYPGMVNREV---------------LDQVERGYRMPCPPECPESL 243

Query: 761 GEIAEKCLDDEGKNRPTMGEVLWHLE 786
            ++  +C   E + RPT   +   LE
Sbjct: 244 HDLMCQCWRKEPEERPTFEYLQAFLE 269

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (510), Expect = 5e-59
 Identities = 69/291 (23%), Positives = 125/291 (42%), Gaps = 26/291 (8%)

Query: 510 VATNNFDESLMIGVGGFGKVFKGEIED-----CTLAAIKRANPQ-SEQGLAEFETEIEML 563
           +  +      +IG G FG+V+KG ++          AIK      +E+   +F  E  ++
Sbjct: 4   IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIM 63

Query: 564 SKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARG 623
            +  H +++ L G   +   M+++ EYM NG L   L   D    +  Q +    G A G
Sbjct: 64  GQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAG 122

Query: 624 LHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVKGSFGY 682
           + YL        +HRD+   NIL++ N V K+SDFGLS+      E T+ ++  K    +
Sbjct: 123 MKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW 179

Query: 683 LDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS 742
             PE    ++ T  SDV+SFG+V++EV+         L   ++                 
Sbjct: 180 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV---------------MK 224

Query: 743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE 793
            I+   +     +      ++  +C   E   RP   +++  L+ +++  +
Sbjct: 225 AINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 275

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (510), Expect = 7e-59
 Identities = 71/270 (26%), Positives = 119/270 (44%), Gaps = 26/270 (9%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           +G G FGKV+K +  E   LAA K  + +SE+ L ++  EI++L+   H ++V L+    
Sbjct: 20  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 79

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
            +N + ++ E+ A G + + +   +  PLT  Q    C      L+YLH   +  IIHRD
Sbjct: 80  YENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLH---DNKIIHRD 135

Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL-----T 694
           +K  NIL   +   K++DFG+S             +  G+  ++ PE    +        
Sbjct: 136 LKAGNILFTLDGDIKLADFGVSAKNTRTIQRR--DSFIGTPYWMAPEVVMCETSKDRPYD 193

Query: 695 EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSP 754
            K+DV+S G+ L E+           P  ++N     +K  K               +S 
Sbjct: 194 YKADVWSLGITLIEMAEIE------PPHHELNPMRVLLKIAKSEPPTLAQPSR----WSS 243

Query: 755 ESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                F +  +KCL+     R T  ++L H
Sbjct: 244 N----FKDFLKKCLEKNVDARWTTSQLLQH 269

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (510), Expect = 9e-59
 Identities = 82/315 (26%), Positives = 140/315 (44%), Gaps = 40/315 (12%)

Query: 513 NNFDESLMIGVGGFGKVFKGEIEDCTL---AAIKRANPQ-SEQGLAEFETEIEMLSKL-R 567
           N+     +IG G FG+V K  I+   L   AAIKR     S+    +F  E+E+L KL  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 568 HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLP--------------PLTWKQR 613
           H ++++L+G C+ +  + L  EY  +G L   L  S +                L+ +Q 
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 129

Query: 614 LDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVS 673
           L      ARG+ YL    ++  IHRD+   NIL+ EN+VAK++DFGLS+     E     
Sbjct: 130 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK 183

Query: 674 TAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMK 733
           T  +    ++  E       T  SDV+S+GV+L+E+V          P   +  A+   K
Sbjct: 184 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG-----TPYCGMTCAELYEK 238

Query: 734 WQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE 793
             +   L+                ++  ++  +C  ++   RP+  ++L  L  +L+  +
Sbjct: 239 LPQGYRLE----------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 288

Query: 794 AWMRTDDRQNSFSSS 808
            ++ T   +    + 
Sbjct: 289 TYVNTTLYEKFTYAG 303

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  201 bits (511), Expect = 1e-58
 Identities = 66/303 (21%), Positives = 123/303 (40%), Gaps = 46/303 (15%)

Query: 513 NNFDESLMIGVGGFGKVFKG------EIEDCTLAAIKRANPQSEQG-LAEFETEIEMLSK 565
            N +   ++G G FGKV         +       A+K    +++        +E++M+++
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 566 L-RHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFG---------------------S 603
           L  H ++V+L+G C     + L++EY   G L ++L                        
Sbjct: 97  LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 156

Query: 604 DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT 663
           DL  LT++  L      A+G+ +L     +  +HRD+   N+L+    V K+ DFGL++ 
Sbjct: 157 DLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARD 213

Query: 664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKD 723
             S  +  V    +    ++ PE  +    T KSDV+S+G++L+E+        P +P D
Sbjct: 214 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 273

Query: 724 QINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLW 783
                              +I    K +    + E+   I + C   + + RP+   +  
Sbjct: 274 AN--------------FYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTS 319

Query: 784 HLE 786
            L 
Sbjct: 320 FLG 322

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (506), Expect = 3e-58
 Identities = 64/294 (21%), Positives = 117/294 (39%), Gaps = 41/294 (13%)

Query: 521 IGVGGFGKVFKGEI------EDCTLAAIKRANPQSEQG-LAEFETEIEMLSKL-RHRHLV 572
           +G G FGKV +         +     A+K   P +         +E+++LS L  H ++V
Sbjct: 31  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90

Query: 573 SLIGFCDEQNEMILVYEYMANGTLRSHLFGS----------------DLPPLTWKQRLDA 616
           +L+G C      +++ EY   G L + L                   D   L  +  L  
Sbjct: 91  NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150

Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
               A+G+ +L     +  IHRD+   NILL    + K+ DFGL++   +  +  V    
Sbjct: 151 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207

Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK 736
           +    ++ PE  +    T +SDV+S+G+ L+E+    +   P +P D             
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK----------- 256

Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                 +I    +      +  +  +I + C D +   RPT  +++  +E  + 
Sbjct: 257 ---FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  198 bits (504), Expect = 7e-58
 Identities = 76/311 (24%), Positives = 119/311 (38%), Gaps = 34/311 (10%)

Query: 515 FDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANP---QSEQGLAEFETEIEMLSKLRHRH 570
           F +   IG G FG V+    + +  + AIK+ +    QS +   +   E+  L KLRH +
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
            +   G    ++   LV EY                PL   +      GA +GL YLH  
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLH-- 132

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF-- 688
               +IHRDVK  NILL E  + K+ DFG +             +  G+  ++ PE    
Sbjct: 133 -SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA------NSFVGTPYWMAPEVILA 185

Query: 689 -WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH 747
               Q   K DV+S G+   E+   +       P   +N         +         P 
Sbjct: 186 MDEGQYDGKVDVWSLGITCIELAERK------PPLFNMNAMSALYHIAQNE------SPA 233

Query: 748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSS 807
           L+  +  E    F    + CL    ++RPT   +L H  +VL+     +  D  Q +  +
Sbjct: 234 LQSGHWSEYFRNF---VDSCLQKIPQDRPTSEVLLKH-RFVLRERPPTVIMDLIQRTKDA 289

Query: 808 SQALGEFAERE 818
            + L     R+
Sbjct: 290 VRELDNLQYRK 300

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  195 bits (496), Expect = 3e-57
 Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 27/272 (9%)

Query: 521 IGVGGFGKVFKGEIED---CTLAAIKRANPQSEQG--LAEFETEIEMLSKLRHRHLVSLI 575
           +G G FG V KG  +        A+K    ++       E   E  ++ +L + ++V +I
Sbjct: 15  LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74

Query: 576 GFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGI 635
           G C E    +LV E    G L  +L  +    +  K  ++     + G+ YL        
Sbjct: 75  GIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEE---SNF 128

Query: 636 IHRDVKTTNILLDENFVAKMSDFGLSK-TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
           +HRD+   N+LL     AK+SDFGLSK       +    T  K    +  PE     + +
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 188

Query: 695 EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSP 754
            KSDV+SFGV+++E            P   +  ++     +K                  
Sbjct: 189 SKSDVWSFGVLMWEAFSYG-----QKPYRGMKGSEVTAMLEKGE------RMGCPAGCPR 237

Query: 755 ESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
           E      ++   C   + +NRP    V   L 
Sbjct: 238 E----MYDLMNLCWTYDVENRPGFAAVELRLR 265

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  196 bits (498), Expect = 6e-57
 Identities = 68/327 (20%), Positives = 133/327 (40%), Gaps = 31/327 (9%)

Query: 506 AEIRVATNN-FDESLMIGVGGFGKVFKGE-IEDCTLAAIKRA-----NPQSEQGLAEFET 558
           A +R+     F +  ++G G FG V+KG  I +     I  A        S +   E   
Sbjct: 1   ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 60

Query: 559 EIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
           E  +++ + + H+  L+G C       L+ + M  G L  ++       +  +  L+ C+
Sbjct: 61  EAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCV 118

Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
             A+G++YL     R ++HRD+   N+L+      K++DFGL+K   + E  + +   K 
Sbjct: 119 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175

Query: 679 SFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR 738
              ++  E    +  T +SDV+S+GV ++E++   +     +P  +I             
Sbjct: 176 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI------------- 222

Query: 739 SLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT 798
              SI++   +    P        I  KC   +  +RP   E++     + +  + ++  
Sbjct: 223 --SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVI 280

Query: 799 DDRQN----SFSSSQALGEFAEREAED 821
              +     S + S       + E  D
Sbjct: 281 QGDERMHLPSPTDSNFYRALMDEEDMD 307

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  193 bits (491), Expect = 2e-56
 Identities = 65/280 (23%), Positives = 106/280 (37%), Gaps = 26/280 (9%)

Query: 520 MIGVGGFGKVFKGEI----EDCTLAAIKRANPQSEQGLAE-FETEIEMLSKLRHRHLVSL 574
            IG G FG V +G            AIK     +   + E F  E   + +  H H+V L
Sbjct: 14  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73

Query: 575 IGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG 634
           IG   E N + ++ E    G LRS         L     +      +  L YL     + 
Sbjct: 74  IGVITE-NPVWIIMELCTLGELRSF-LQVRKYSLDLASLILYAYQLSTALAYLE---SKR 128

Query: 635 IIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
            +HRD+   N+L+  N   K+ DFGLS+      +   ++  K    ++ PE    ++ T
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESINFRRFT 187

Query: 695 EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSP 754
             SDV+ FGV ++E++      +   P   +   D   + +            +  N  P
Sbjct: 188 SASDVWMFGVCMWEILM-----HGVKPFQGVKNNDVIGRIENGE------RLPMPPNCPP 236

Query: 755 ESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEA 794
                   +  KC   +   RP   E+   L  +L+  +A
Sbjct: 237 T----LYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 272

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  192 bits (490), Expect = 2e-56
 Identities = 64/280 (22%), Positives = 115/280 (41%), Gaps = 27/280 (9%)

Query: 514 NFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRH 570
           +++    IG G +G+  K     D  +   K  +  S  E       +E+ +L +L+H +
Sbjct: 5   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64

Query: 571 LVSLIGFCDEQNE--MILVYEYMANGTLRSHLF--GSDLPPLTWKQRLDACIGAARGLHY 626
           +V       ++    + +V EY   G L S +     +   L  +  L         L  
Sbjct: 65  IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 124

Query: 627 LH--TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLD 684
            H  +     ++HRD+K  N+ LD     K+ DFGL++       T  + A  G+  Y+ 
Sbjct: 125 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTPYYMS 182

Query: 685 PEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII 744
           PE   R    EKSD++S G +L+E+           P    +  + A K ++ +      
Sbjct: 183 PEQMNRMSYNEKSDIWSLGCLLYELCALM------PPFTAFSQKELAGKIREGK------ 230

Query: 745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
              +   YS E      EI  + L+ +  +RP++ E+L +
Sbjct: 231 FRRIPYRYSDE----LNEIITRMLNLKDYHRPSVEEILEN 266

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  191 bits (487), Expect = 5e-56
 Identities = 64/272 (23%), Positives = 115/272 (42%), Gaps = 30/272 (11%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           IG G F  V+KG   E     A      +  ++     F+ E EML  L+H ++V     
Sbjct: 17  IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDS 76

Query: 578 C----DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
                  +  ++LV E M +GTL+++L       +  K     C    +GL +LHT    
Sbjct: 77  WESTVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHT-RTP 133

Query: 634 GIIHRDVKTTNILL-DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
            IIHRD+K  NI +       K+ D GL+     ++    + AV G+  ++ PE +  ++
Sbjct: 134 PIIHRDLKCDNIFITGPTGSVKIGDLGLAT----LKRASFAKAVIGTPEFMAPEMY-EEK 188

Query: 693 LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY 752
             E  DVY+FG+ + E+  +        P        ++      +  + +       ++
Sbjct: 189 YDESVDVYAFGMCMLEMATSE------YP--------YSECQNAAQIYRRVTSGVKPASF 234

Query: 753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
              ++ +  EI E C+      R ++ ++L H
Sbjct: 235 DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 266

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  190 bits (485), Expect = 3e-55
 Identities = 58/265 (21%), Positives = 110/265 (41%), Gaps = 23/265 (8%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           IG G  G V+   ++      AI++ N Q +        EI ++ + ++ ++V+ +    
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
             +E+ +V EY+A G+L   +  +    +   Q    C    + L +LH      +IHRD
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLH---SNQVIHRD 141

Query: 640 VKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDV 699
           +K+ NILL  +   K++DFG        +     + + G+  ++ PE   R+    K D+
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKVDI 199

Query: 700 YSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEK 759
           +S G++  E++          P    N            + +      L    S      
Sbjct: 200 WSLGIMAIEMIEGE------PPYLNENPLRALYLIATNGTPELQNPEKL----SAI---- 245

Query: 760 FGEIAEKCLDDEGKNRPTMGEVLWH 784
           F +   +CLD + + R +  E+L H
Sbjct: 246 FRDFLNRCLDMDVEKRGSAKELLQH 270

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (478), Expect = 8e-55
 Identities = 65/288 (22%), Positives = 116/288 (40%), Gaps = 37/288 (12%)

Query: 501 KRFTLAEIRVATNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIK---RANPQSEQGLAEF 556
           +++ L        +F+    +G G FG V+     +   + A+K   +A  +      + 
Sbjct: 1   RQWAL-------EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 53

Query: 557 ETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDA 616
             E+E+ S LRH +++ L G+  +   + L+ EY   GT+   L    L     ++    
Sbjct: 54  RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATY 111

Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
               A  L Y H    + +IHRD+K  N+LL      K++DFG S   PS   T     +
Sbjct: 112 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----L 164

Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK 736
            G+  YL PE    +   EK D++S GV+ +E +  +       P +     +   +  +
Sbjct: 165 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------PPFEANTYQETYKRISR 218

Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                  ++       +        ++  + L      RP + EVL H
Sbjct: 219 -------VEFTFPDFVTEG----ARDLISRLLKHNPSQRPMLREVLEH 255

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (465), Expect = 7e-53
 Identities = 65/275 (23%), Positives = 102/275 (37%), Gaps = 22/275 (8%)

Query: 513 NNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAE-FETEIEMLSKLRHRH 570
            ++D    +G G +G+V            A+K  + +      E  + EI +   L H +
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
           +V   G   E N   L  EY + G L   +       +              G+ YLH  
Sbjct: 65  VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLH-- 120

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
              GI HRD+K  N+LLDE    K+SDFGL+          +   + G+  Y+ PE   R
Sbjct: 121 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179

Query: 691 QQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK 749
           ++   E  DV+S G+VL  ++      +      Q   +DW  K       K  ID    
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKK-IDSAPL 237

Query: 750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                        +  K L +    R T+ ++   
Sbjct: 238 ------------ALLHKILVENPSARITIPDIKKD 260

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (463), Expect = 1e-52
 Identities = 62/274 (22%), Positives = 102/274 (37%), Gaps = 27/274 (9%)

Query: 521 IGVGGFGKVFKGEIEDCT----LAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVS 573
           +G G FG V +GE +  +      A+K   P      + + +F  E+  +  L HR+L+ 
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           L G       M +V E    G+L   L                 +  A G+ YL     +
Sbjct: 76  LYGVV-LTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLE---SK 130

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSK-TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
             IHRD+   N+LL    + K+ DFGL +    + +H  +    K  F +  PE    + 
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190

Query: 693 LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNY 752
            +  SD + FGV L+E+          L   QI              L  I     +   
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI--------------LHKIDKEGERLPR 236

Query: 753 SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE 786
             +  +    +  +C   + ++RPT   +   L 
Sbjct: 237 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 270

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  184 bits (468), Expect = 2e-52
 Identities = 56/267 (20%), Positives = 107/267 (40%), Gaps = 23/267 (8%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           +G G FG V +  E       A K      E        EI+ +S LRH  LV+L    +
Sbjct: 34  LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 93

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
           + NEM+++YE+M+ G L   +       ++  + ++      +GL ++H   E   +H D
Sbjct: 94  DDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLD 149

Query: 640 VKTTNILL--DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKS 697
           +K  NI+     +   K+ DFGL+     ++         G+  +  PE    + +   +
Sbjct: 150 LKPENIMFTTKRSNELKLIDFGLTA---HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT 206

Query: 698 DVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESL 757
           D++S GV+ + ++   +        + +         +  +S    +D       S +  
Sbjct: 207 DMWSVGVLSYILLSGLSPFGGENDDETL---------RNVKSCDWNMDDSAFSGISED-- 255

Query: 758 EKFGEIAEKCLDDEGKNRPTMGEVLWH 784
               +   K L  +   R T+ + L H
Sbjct: 256 --GKDFIRKLLLADPNTRMTIHQALEH 280

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (462), Expect = 3e-52
 Identities = 67/295 (22%), Positives = 132/295 (44%), Gaps = 42/295 (14%)

Query: 521 IGVGGFGKVFKGE--------IEDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRH 570
           +G G FG+V   E            T  A+K      +E+ L++  +E+EM+  + +H++
Sbjct: 21  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPP--------------LTWKQRLDA 616
           +++L+G C +   + ++ EY + G LR +L     P               L+ K  +  
Sbjct: 81  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 140

Query: 617 CIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAV 676
               ARG+ YL     +  IHRD+   N+L+ E+ V K++DFGL++    +++   +T  
Sbjct: 141 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197

Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK 736
           +    ++ PE  + +  T +SDV+SFGV+L+E+        P +P ++            
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------------ 245

Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL 791
              L  ++    + +       +   +   C       RPT  +++  L+ ++ L
Sbjct: 246 ---LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 297

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (463), Expect = 3e-52
 Identities = 71/312 (22%), Positives = 123/312 (39%), Gaps = 40/312 (12%)

Query: 513 NNFDESLMIGVGGFGKVFKGE------IEDCTLAAIKRANP-QSEQGLAEFETEIEMLSK 565
                S  +G G FG V++G        E  T  AIK  N   S +   EF  E  ++ +
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 566 LRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLF--------GSDLPPLTWKQRLDAC 617
               H+V L+G   +    +++ E M  G L+S+L            L P +  + +   
Sbjct: 80  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 139

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
              A G+ YL+       +HRD+   N ++ E+F  K+ DFG+++     ++        
Sbjct: 140 GEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 196

Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ 737
               ++ PE       T  SDV+SFGVVL+E+          L  +Q+            
Sbjct: 197 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV------------ 244

Query: 738 RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMR 797
             L+ +++  L  +      +   E+   C     K RP+  E++  +       +  M 
Sbjct: 245 --LRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI-------KEEME 294

Query: 798 TDDRQNSFSSSQ 809
              R+ SF  S+
Sbjct: 295 PGFREVSFYYSE 306

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  177 bits (449), Expect = 2e-50
 Identities = 68/295 (23%), Positives = 118/295 (40%), Gaps = 40/295 (13%)

Query: 521 IGVGGFGKVFKG------EIEDCTLAAIKRANPQSEQG-LAEFETEIEMLSKLRHRH-LV 572
           +G G FG+V +       +   C   A+K     +         +E+++L  + H   +V
Sbjct: 21  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 80

Query: 573 SLIGFCDEQNEMI-LVYEYMANGTLRSHLFGSD--------------LPPLTWKQRLDAC 617
           +L+G C +    + ++ E+   G L ++L                     LT +  +   
Sbjct: 81  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 140

Query: 618 IGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVK 677
              A+G+ +L     R  IHRD+   NILL E  V K+ DFGL++              +
Sbjct: 141 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 197

Query: 678 GSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ 737
               ++ PE  + +  T +SDV+SFGV+L+E+    A      P   + + +   +    
Sbjct: 198 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA-----SPYPGVKIDEEFCRR--- 249

Query: 738 RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH 792
             LK           +PE      +    C   E   RPT  E++ HL  +LQ +
Sbjct: 250 --LKEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 298

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  177 bits (451), Expect = 5e-50
 Identities = 54/267 (20%), Positives = 111/267 (41%), Gaps = 23/267 (8%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           +G G FG V +  E     +   K  N          + EI ++++L H  L++L    +
Sbjct: 37  LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 96

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
           ++ EM+L+ E+++ G L   +   D   ++  + ++    A  GL ++H   E  I+H D
Sbjct: 97  DKYEMVLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMH---EHSIVHLD 152

Query: 640 VKTTNILLD--ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKS 697
           +K  NI+ +  +    K+ DFGL+     +    +      +  +  PE   R+ +   +
Sbjct: 153 IKPENIMCETKKASSVKIIDFGLAT---KLNPDEIVKVTTATAEFAAPEIVDREPVGFYT 209

Query: 698 DVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESL 757
           D+++ GV+ + ++   +        + +         Q  +      D     + SPE  
Sbjct: 210 DMWAIGVLGYVLLSGLSPFAGEDDLETL---------QNVKRCDWEFDEDAFSSVSPE-- 258

Query: 758 EKFGEIAEKCLDDEGKNRPTMGEVLWH 784
               +  +  L  E + R T+ + L H
Sbjct: 259 --AKDFIKNLLQKEPRKRLTVHDALEH 283

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (444), Expect = 8e-50
 Identities = 59/299 (19%), Positives = 115/299 (38%), Gaps = 29/299 (9%)

Query: 509 RVATNNFDESLMIGVGGFGKVFKG-EIEDCTLAAIKRANPQ---SEQGLAEFETEIEMLS 564
           +    +F    ++G G F  V    E+      AIK    +    E  +     E +++S
Sbjct: 4   KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63

Query: 565 KLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGL 624
           +L H   V L     +  ++     Y  NG L  ++    +                  L
Sbjct: 64  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSAL 121

Query: 625 HYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLD 684
            YLH    +GIIHRD+K  NILL+E+   +++DFG +K          + +  G+  Y+ 
Sbjct: 122 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 178

Query: 685 PEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII 744
           PE    +   + SD+++ G +++++V       P    ++  +    +K          +
Sbjct: 179 PELLTEKSACKSSDLWALGCIIYQLVAGL---PPFRAGNEYLIFQKIIK----------L 225

Query: 745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQN 803
           +      + P+      ++ EK L  +   R    E+  +    L+ H  +  +   +N
Sbjct: 226 EYDFPEKFFPK----ARDLVEKLLVLDATKRLGCEEMEGYGP--LKAH-PFFESVTWEN 277

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (431), Expect = 1e-47
 Identities = 51/293 (17%), Positives = 116/293 (39%), Gaps = 27/293 (9%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCD 579
           +G G FG V +  E         K    +        + EI +L+  RHR+++ L    +
Sbjct: 13  LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHESFE 71

Query: 580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRD 639
              E+++++E+++   +   +  S    L  ++ +         L +LH      I H D
Sbjct: 72  SMEELVMIFEFISGLDIFERINTSAF-ELNEREIVSYVHQVCEALQFLH---SHNIGHFD 127

Query: 640 VKTTNILLD--ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKS 697
           ++  NI+     +   K+ +FG ++    ++       +  +  Y  PE      ++  +
Sbjct: 128 IRPENIIYQTRRSSTIKIIEFGQAR---QLKPGDNFRLLFTAPEYYAPEVHQHDVVSTAT 184

Query: 698 DVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESL 757
           D++S G +++ ++      NP L +    +       +   + +   D       S E++
Sbjct: 185 DMWSLGTLVYVLLSGI---NPFLAETNQQI------IENIMNAEYTFDEEAFKEISIEAM 235

Query: 758 EKFGEIAEKCLDDEGKNRPTMGEVLWH---LEYVLQLHEAWMRTDDRQNSFSS 807
               +  ++ L  E K+R T  E L H    + + ++    +RT   +  + +
Sbjct: 236 ----DFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLKHRRYYHT 284

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  162 bits (411), Expect = 2e-45
 Identities = 66/277 (23%), Positives = 110/277 (39%), Gaps = 28/277 (10%)

Query: 520 MIGVGGFGKVFKGE-IEDCTLAAIKRANP---QSEQGLAEFETEIEMLSKLRHRHLVSLI 575
           ++G GG  +V     +      A+K       +       F  E +  + L H  +V++ 
Sbjct: 14  ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 73

Query: 576 GFCDEQNE----MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
              + +        +V EY+   TLR  +      P+T K+ ++    A + L++ H   
Sbjct: 74  DTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSH--- 128

Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVKGSFGYLDPEYFWR 690
           + GIIHRDVK  NI++      K+ DFG+++    S      + AV G+  YL PE    
Sbjct: 129 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 188

Query: 691 QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG 750
             +  +SDVYS G VL+EV+          P    +    A +  ++     I       
Sbjct: 189 DSVDARSDVYSLGCVLYEVLTGE------PPFTGDSPVSVAYQHVRE---DPIPPSARHE 239

Query: 751 NYSPESLEKFGEIAEKCLDDEGKNRP-TMGEVLWHLE 786
             S +       +  K L    +NR  T  E+   L 
Sbjct: 240 GLSAD----LDAVVLKALAKNPENRYQTAAEMRADLV 272

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (408), Expect = 1e-44
 Identities = 66/296 (22%), Positives = 111/296 (37%), Gaps = 29/296 (9%)

Query: 511 ATNNFDESLMIGVGGFGKVFKGE--IEDCTLAAIKRANPQS--EQGLAEFETEIEMLSKL 566
           A   ++    IG G +GKVFK           A+KR   Q+  E        E+ +L  L
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 567 ---RHRHLVSLIGFC-----DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACI 618
               H ++V L   C     D + ++ LV+E++      ++L     P +  +   D   
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLT-TYLDKVPEPGVPTETIKDMMF 123

Query: 619 GAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKG 678
              RGL +LH      ++HRD+K  NIL+  +   K++DFGL++           T+V  
Sbjct: 124 QLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVV 177

Query: 679 SFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL----------A 728
           +  Y  PE   +       D++S G +  E+   + +   +   DQ+             
Sbjct: 178 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 237

Query: 729 DWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
           DW       R             +  +  E   ++  KCL      R +    L H
Sbjct: 238 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  160 bits (406), Expect = 1e-44
 Identities = 59/288 (20%), Positives = 113/288 (39%), Gaps = 38/288 (13%)

Query: 514 NFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANP---------QSEQGLAEFETEIEML 563
           N++   ++G G    V +      C   A+K  +          + ++       E+++L
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 564 SKLR-HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAAR 622
            K+  H +++ L    +      LV++ M  G L  +L  ++   L+ K+          
Sbjct: 64  RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLE 121

Query: 623 GLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGY 682
            +  LH   +  I+HRD+K  NILLD++   K++DFG S     ++       V G+  Y
Sbjct: 122 VICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC---QLDPGEKLREVCGTPSY 175

Query: 683 LDPEYFW------RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK 736
           L PE              ++ D++S GV+++ ++       P   + Q+ +    M    
Sbjct: 176 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS---PPFWHRKQMLMLRMIMSGNY 232

Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
           Q             +YS        ++  + L  + + R T  E L H
Sbjct: 233 Q------FGSPEWDDYSDT----VKDLVSRFLVVQPQKRYTAEEALAH 270

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  160 bits (405), Expect = 3e-44
 Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 26/270 (9%)

Query: 520 MIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQG-LAEFETEIEMLSKLRHRHLVSLIGF 577
           ++G G F +V   E      L AIK    ++ +G     E EI +L K++H ++V+L   
Sbjct: 16  VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDI 75

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIH 637
            +    + L+ + ++ G L   +   +    T +            + YLH   + GI+H
Sbjct: 76  YESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLH---DLGIVH 130

Query: 638 RDVKTTNILL---DENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLT 694
           RD+K  N+L    DE+    +SDFGLSK     +   V +   G+ GY+ PE   ++  +
Sbjct: 131 RDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYS 187

Query: 695 EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSP 754
           +  D +S GV+ + ++C      P   ++   L +  +K + +       D     + S 
Sbjct: 188 KAVDCWSIGVIAYILLCGYP---PFYDENDAKLFEQILKAEYE------FDSPYWDDISD 238

Query: 755 ESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                  +     ++ + + R T  + L H
Sbjct: 239 S----AKDFIRHLMEKDPEKRFTCEQALQH 264

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  159 bits (403), Expect = 2e-43
 Identities = 59/285 (20%), Positives = 105/285 (36%), Gaps = 36/285 (12%)

Query: 513 NNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKR------ANPQSEQGLAEFETEIEMLSK 565
           N+F    +IG GGFG+V+     +   + A+K          Q E         + ++S 
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 566 LRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLH 625
                +V +       +++  + + M  G L  HL  S     +             GL 
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLE 121

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDP 685
           ++H    R +++RD+K  NILLDE+   ++SD GL+      +         G+ GY+ P
Sbjct: 122 HMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAP 174

Query: 686 EYFWRQQ-LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII 744
           E   +       +D +S G +LF+++   +       KD+  +    +            
Sbjct: 175 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM---------- 224

Query: 745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMG-----EVLWH 784
              L  ++SPE       + E  L  +   R         EV   
Sbjct: 225 AVELPDSFSPE----LRSLLEGLLQRDVNRRLGCLGRGAQEVKES 265

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  156 bits (394), Expect = 5e-43
 Identities = 52/294 (17%), Positives = 94/294 (31%), Gaps = 27/294 (9%)

Query: 507 EIRVATNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSK 565
           E+RV  N +     IG G FG ++ G  I      AIK    +++    +   E ++   
Sbjct: 2   ELRVG-NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKM 58

Query: 566 LRHRHLVSLIGFCDEQNEM-ILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGL 624
           ++    +  I +C  + +  ++V E +         F S     + K  L         +
Sbjct: 59  MQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS--RKFSLKTVLLLADQMISRI 116

Query: 625 HYLHTGAERGIIHRDVKTTNIL---LDENFVAKMSDFGLSK-----TGPSMEHTHVSTAV 676
            Y+H    +  IHRDVK  N L     +  +  + DFGL+K               +  +
Sbjct: 117 EYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL 173

Query: 677 KGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQK 736
            G+  Y         + + + D+ S G VL                 +    +   + + 
Sbjct: 174 TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK- 232

Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
                S     L   Y  E    F      C      ++P    +      +  
Sbjct: 233 ----MSTPIEVLCKGYPSE----FATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 278

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (394), Expect = 6e-43
 Identities = 54/287 (18%), Positives = 108/287 (37%), Gaps = 22/287 (7%)

Query: 514 NFDESLMIGVGGFGKVFKGE-IEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRH 570
           NF +   IG G +G V+K        + A+K  R + ++E   +    EI +L +L H +
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
           +V L+     +N++ LV+E++ +  L+  +  S L  +             +GL + H  
Sbjct: 63  IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 119

Query: 631 AERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
               ++HRD+K  N+L++     K++DFGL++    +     +  V   +          
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARA-FGVPVRTYTHEVVTLWYRAPEILLGC 177

Query: 691 QQLTEKSDVYSFGVVLFEVVCAR-------------AVINPTLPKDQINLADWAMKWQKQ 737
           +  +   D++S G +  E+V  R              +       D++           +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237

Query: 738 RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
            S              P   +    +  + L  +   R +    L H
Sbjct: 238 PSFPKWARQDFSKVVPPLDED-GRSLLSQMLHYDPNKRISAKAALAH 283

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (396), Expect = 1e-42
 Identities = 65/293 (22%), Positives = 117/293 (39%), Gaps = 23/293 (7%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAE-FETEIEMLSKLRHRHLVSLIGF 577
            IG G +G V    +  +    AIK+ +P   Q   +    EI++L + RH +++ +   
Sbjct: 15  YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 74

Query: 578 CDEQNEMILVYEYMANGTLRSHLFG-SDLPPLTWKQRLDACIGAARGLHYLHTGAERGII 636
                   +   Y+    + + L+       L+            RGL Y+H      ++
Sbjct: 75  IRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 131

Query: 637 HRDVKTTNILLDENFVAKMSDFGLSKT-GPSMEHTHVSTAVKGSFGYLDPEYFWRQQL-T 694
           HRD+K +N+LL+     K+ DFGL++   P  +HT   T    +  Y  PE     +  T
Sbjct: 132 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 191

Query: 695 EKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG---- 750
           +  D++S G +L E++  R +       DQ+N     +    Q  L  II+   +     
Sbjct: 192 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 251

Query: 751 ----------NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE 793
                        P +  K  ++ +K L      R  + + L H  Y+ Q ++
Sbjct: 252 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH-PYLEQYYD 303

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  154 bits (391), Expect = 2e-42
 Identities = 59/281 (20%), Positives = 110/281 (39%), Gaps = 36/281 (12%)

Query: 513 NNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRH 568
            +F     +G G FG+V       +    A+K    +     + +     E  MLS + H
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 569 RHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLH 628
             ++ + G   +  ++ ++ +Y+  G L S L  S   P    +   A +     L YLH
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEV--CLALEYLH 121

Query: 629 TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYF 688
               + II+RD+K  NILLD+N   K++DFG +K  P + +T       G+  Y+ PE  
Sbjct: 122 ---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLC-----GTPDYIAPEVV 173

Query: 689 WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL 748
             +   +  D +SFG++++E++          P    N      K           +   
Sbjct: 174 STKPYNKSIDWWSFGILIYEMLAGY------TPFYDSNTMKTYEKILNA-------ELRF 220

Query: 749 KGNYSPESLEKFGEIAEKCLDDEGKNR-----PTMGEVLWH 784
              ++ +      ++  + +  +   R         +V  H
Sbjct: 221 PPFFNED----VKDLLSRLITRDLSQRLGNLQNGTEDVKNH 257

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  153 bits (386), Expect = 4e-42
 Identities = 54/278 (19%), Positives = 108/278 (38%), Gaps = 20/278 (7%)

Query: 521 IGVGGFGKVFKGEIEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFC 578
           IG G +G V+K +       A+K  R   + E   +    EI +L +L+H ++V L    
Sbjct: 10  IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
             +  ++LV+E++     +          L         +    G+ Y H   +R ++HR
Sbjct: 70  HTKKRLVLVFEHLDQDLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCH---DRRVLHR 124

Query: 639 DVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSD 698
           D+K  N+L++     K++DFGL++        +    +   +          ++ +   D
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYT-HEIVTLWYRAPDVLMGSKKYSTTID 183

Query: 699 VYSFGVVLFEVVCARAVINPTLPKDQI----------NLADWA--MKWQKQRSLKSIIDP 746
           ++S G +  E+V    +       DQ+          N  +W    +  K     ++ +P
Sbjct: 184 IWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEP 243

Query: 747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
               ++     E   ++  K L  +   R T  + L H
Sbjct: 244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  153 bits (386), Expect = 7e-42
 Identities = 61/287 (21%), Positives = 110/287 (38%), Gaps = 33/287 (11%)

Query: 520 MIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAE-----FETEIEMLSKLRHRHLVS 573
            +G G F  V+K        + AIK+          +        EI++L +L H +++ 
Sbjct: 5   FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 64

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           L+     ++ + LV+++M           S    LT        +   +GL YLH   + 
Sbjct: 65  LLDAFGHKSNISLVFDFMETDLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLH---QH 119

Query: 634 GIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL 693
            I+HRD+K  N+LLDEN V K++DFGL+K+  S    +  T    +  Y  PE  +  ++
Sbjct: 120 WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--THQVVTRWYRAPELLFGARM 177

Query: 694 -TEKSDVYSFGVVLFEVVCARAV---------------INPTLPKDQINLADWAMKWQKQ 737
                D+++ G +L E++                       T  ++Q         +   
Sbjct: 178 YGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF 237

Query: 738 RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
           +S   I   H+      + L    ++ +         R T  + L  
Sbjct: 238 KSFPGIPLHHIFSAAGDDLL----DLIQGLFLFNPCARITATQALKM 280

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  153 bits (388), Expect = 7e-42
 Identities = 65/278 (23%), Positives = 107/278 (38%), Gaps = 30/278 (10%)

Query: 513 NNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANP---QSEQGLAEFETEIEMLSK-LR 567
            +F    M+G G FGKVF  E  +     AIK         +  +     E  +LS    
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 568 HRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYL 627
           H  L  +      +  +  V EY+  G L  H+           +          GL +L
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFL 119

Query: 628 HTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEY 687
           H    +GI++RD+K  NILLD++   K++DFG+ K     +         G+  Y+ PE 
Sbjct: 120 H---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NTFCGTPDYIAPEI 174

Query: 688 FWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH 747
              Q+     D +SFGV+L+E++  +   +P   +D+  L                 +P 
Sbjct: 175 LLGQKYNHSVDWWSFGVLLYEMLIGQ---SPFHGQDEEELFHSIRMD----------NPF 221

Query: 748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTM-GEVLWH 784
                  E      ++  K    E + R  + G++  H
Sbjct: 222 YPRWLEKE----AKDLLVKLFVREPEKRLGVRGDIRQH 255

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  153 bits (388), Expect = 9e-42
 Identities = 61/314 (19%), Positives = 116/314 (36%), Gaps = 36/314 (11%)

Query: 520 MIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGF 577
           ++G+G  GKV +          A+K      +        E+E+  +  +  H+V ++  
Sbjct: 19  VLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-----ARREVELHWRASQCPHIVRIVDV 73

Query: 578 CD----EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
            +     +  +++V E +  G L S +        T ++  +        + YLH     
Sbjct: 74  YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SI 130

Query: 634 GIIHRDVKTTNILLD---ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWR 690
            I HRDVK  N+L      N + K++DFG +K   S            +  Y+ PE    
Sbjct: 131 NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT---PCYTPYYVAPEVLGP 187

Query: 691 QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG 750
           ++  +  D++S GV+++ ++C               LA       + R  +         
Sbjct: 188 EKYDKSCDMWSLGVIMYILLCGY-----PPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 242

Query: 751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQA 810
             S E       +    L  E   R T+ E + H  +++Q  +        Q    +S+ 
Sbjct: 243 EVSEE----VKMLIRNLLKTEPTQRMTITEFMNH-PWIMQSTKV------PQTPLHTSRV 291

Query: 811 LGEFAEREAEDGQD 824
           L E  ER  +  ++
Sbjct: 292 LKEDKERWEDVKEE 305

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (382), Expect = 2e-41
 Identities = 61/305 (20%), Positives = 123/305 (40%), Gaps = 41/305 (13%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANP------QSEQGLAEFETEIEMLSKLRHRHLVS 573
           +G G F  V K  E       A K          +      + E E+ +L +++H ++++
Sbjct: 18  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77

Query: 574 LIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAER 633
           L    + + ++IL+ E +A G L   L   +   LT ++  +       G++YLH     
Sbjct: 78  LHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLH---SL 132

Query: 634 GIIHRDVKTTNILLDENFVA----KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW 689
            I H D+K  NI+L +  V     K+ DFGL+     ++  +    + G+  ++ PE   
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVN 189

Query: 690 RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK 749
            + L  ++D++S GV+ + ++   +       ++               ++    +    
Sbjct: 190 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQET---------LANVSAVNYEFEDEYF 240

Query: 750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQNSFSSSQ 809
            N S        +   + L  + K R T+ + L H          W++  D Q + SS+ 
Sbjct: 241 SNTSAL----AKDFIRRLLVKDPKKRMTIQDSLQH---------PWIKPKDTQQALSSAW 287

Query: 810 ALGEF 814
           +  +F
Sbjct: 288 SHPQF 292

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (384), Expect = 5e-41
 Identities = 69/331 (20%), Positives = 119/331 (35%), Gaps = 35/331 (10%)

Query: 509 RVATNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR 567
           R    ++ ++ +IG G FG V++ +  +   L AIK+              E++++ KL 
Sbjct: 16  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLD 71

Query: 568 HRHLVSLIGFCDEQNE------MILVYEYMANGTLRSHLFGSDLP-PLTWKQRLDACIGA 620
           H ++V L  F     E      + LV +Y+     R     S     L            
Sbjct: 72  HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131

Query: 621 ARGLHYLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGS 679
            R L Y+H     GI HRD+K  N+LLD +  V K+ DFG +K     E     + +   
Sbjct: 132 FRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSR 186

Query: 680 FGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL------------ 727
           +       F     T   DV+S G VL E++  + +       DQ+              
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246

Query: 728 ADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY 787
                    +     I        + P +  +   +  + L+     R T  E   H  +
Sbjct: 247 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH-SF 305

Query: 788 VLQLHEAWMRTDDRQNSFSSSQALGEFAERE 818
             +L +  ++  + +     + AL  F  +E
Sbjct: 306 FDELRDPNVKLPNGR----DTPALFNFTTQE 332

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  149 bits (377), Expect = 9e-41
 Identities = 43/282 (15%), Positives = 88/282 (31%), Gaps = 28/282 (9%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHR-HLVSLIGFC 578
           IG G FG +F+G  + +    AIK    +S+    +   E      L     + ++  F 
Sbjct: 13  IGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNVYYFG 70

Query: 579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHR 638
            E    +LV + +  G     L        + K    A       +  +H   E+ +++R
Sbjct: 71  QEGLHNVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYR 125

Query: 639 DVKTTNILLDENFV-----AKMSDFGLSK-----TGPSMEHTHVSTAVKGSFGYLDPEYF 688
           D+K  N L+            + DFG+ K                  + G+  Y+     
Sbjct: 126 DIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTH 185

Query: 689 WRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL 748
             ++ + + D+ + G V    +                  +   + ++   L+ +     
Sbjct: 186 LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCA--- 242

Query: 749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ 790
              +  E    F +      +      P    +      VL+
Sbjct: 243 --GFPEE----FYKYMHYARNLAFDATPDYDYLQGLFSKVLE 278

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (361), Expect = 8e-39
 Identities = 56/276 (20%), Positives = 99/276 (35%), Gaps = 42/276 (15%)

Query: 520 MIGVGGFGKVFKG-EIEDCTLAAIKRANPQSEQGLAE------FETEIEMLSKLRHRH-- 570
           ++G GGFG V+ G  + D    AIK           E         E+ +L K+      
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70

Query: 571 LVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG 630
           ++ L+ + +  +  +L+ E                  L  +            + + H  
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCH-- 127

Query: 631 AERGIIHRDVKTTNILLDEN-FVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFW 689
              G++HRD+K  NIL+D N    K+ DFG       +    V T   G+  Y  PE+  
Sbjct: 128 -NCGVLHRDIKDENILIDLNRGELKLIDFGSGA----LLKDTVYTDFDGTRVYSPPEWIR 182

Query: 690 RQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL 748
             +     + V+S G++L+++VC      P    ++I         + Q   +  +    
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGD---IPFEHDEEII--------RGQVFFRQRVSSEC 231

Query: 749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
           +             +   CL     +RPT  E+  H
Sbjct: 232 Q------------HLIRWCLALRPSDRPTFEEIQNH 255

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (361), Expect = 4e-38
 Identities = 73/285 (25%), Positives = 110/285 (38%), Gaps = 33/285 (11%)

Query: 509 RVATNNFDESLMIGVGGFGKVFKGE-IEDCTLAAIKRANPQ---SEQGLAEFETEIEMLS 564
           +V  N+FD   ++G G FGKV            A+K    +   ++  +A   TE  +L 
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60

Query: 565 KLRHRHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGL 624
             RH  L +L       + +  V EY   G L  HL  S     T ++           L
Sbjct: 61  NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSAL 118

Query: 625 HYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLD 684
            YLH    R +++RD+K  N++LD++   K++DFGL K G S   T       G+  YL 
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KTFCGTPEYLA 173

Query: 685 PEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII 744
           PE           D +  GVV++E++C R      LP    +          +       
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR------LPFYNQDHERLFELILME------- 220

Query: 745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMG-----EVLWH 784
           +       SPE       +    L  + K R   G     EV+ H
Sbjct: 221 EIRFPRTLSPE----AKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (359), Expect = 5e-38
 Identities = 56/293 (19%), Positives = 111/293 (37%), Gaps = 34/293 (11%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           IG G FG+VFK    +     A+K+   ++  E        EI++L  L+H ++V+LI  
Sbjct: 18  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 77

Query: 578 CDEQ--------NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHT 629
           C  +          + LV+++  +         + L   T  +          GL+Y+H 
Sbjct: 78  CRTKASPYNRCKGSIYLVFDFCEHDLAGLLS--NVLVKFTLSEIKRVMQMLLNGLYYIH- 134

Query: 630 GAERGIIHRDVKTTNILLDENFVAKMSDFGLSK--TGPSMEHTHVSTAVKGSFGYLDPEY 687
                I+HRD+K  N+L+  + V K++DFGL++  +       +  T    +  Y  PE 
Sbjct: 135 --RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPEL 192

Query: 688 FWRQQL-TEKSDVYSFGVVLFEVVCARAV---------------INPTLPKDQINLADWA 731
              ++      D++  G ++ E+     +               +  ++  +     D  
Sbjct: 193 LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNY 252

Query: 732 MKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
             ++K   +K           +        ++ +K L  +   R    + L H
Sbjct: 253 ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (350), Expect = 4e-37
 Identities = 55/280 (19%), Positives = 103/280 (36%), Gaps = 22/280 (7%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           IG G +G VFK +  E   + A+K  R +   E   +    EI +L +L+H+++V L   
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69

Query: 578 CDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIH 637
                ++ LV+E+      +     +        +     +   +GL + H+   R ++H
Sbjct: 70  LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL--LKGLGFCHS---RNVLH 124

Query: 638 RDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKS 697
           RD+K  N+L++ N   K+++FGL++    +     S  V   +       F  +  +   
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLARA-FGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSI 183

Query: 698 DVYSFGVVLFEVVCAR-------------AVINPTLPKDQINLADWAMKWQKQRSLKSII 744
           D++S G +  E+  A                I   L            K    +      
Sbjct: 184 DMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYP 243

Query: 745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH 784
                 N  P+      ++ +  L      R +  E L H
Sbjct: 244 ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  137 bits (346), Expect = 5e-36
 Identities = 62/320 (19%), Positives = 120/320 (37%), Gaps = 39/320 (12%)

Query: 477 NSTANAKGSGTQYLKGSVALTRAG---KRFTLAEIRVATNNFDESLMIGVGGFGKVFKGE 533
           N+ A  KGS  + +K  +A  +     K  T ++     + FD    +G G FG+V   +
Sbjct: 2   NAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61

Query: 534 -IEDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE 589
             E     A+K  + Q     + +     E  +L  +    LV L     + + + +V E
Sbjct: 62  HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121

Query: 590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE 649
           Y+A G + SHL    +   +                YLH      +I+RD+K  N+L+D+
Sbjct: 122 YVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 176

Query: 650 NFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEV 709
               +++DFG +K       T     + G+   L PE    +   +  D ++ GV+++E+
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWT-----LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM 231

Query: 710 VCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLD 769
                   P      I + +  +  +               ++S +      ++    L 
Sbjct: 232 AAGYP---PFFADQPIQIYEKIVSGK----------VRFPSHFSSD----LKDLLRNLLQ 274

Query: 770 DEGKNR-----PTMGEVLWH 784
            +   R       + ++  H
Sbjct: 275 VDLTKRFGNLKNGVNDIKNH 294

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (342), Expect = 1e-35
 Identities = 63/298 (21%), Positives = 110/298 (36%), Gaps = 37/298 (12%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIK--RANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           +G G +G V    +       AIK      QSE        E+ +L  +RH +++ L+  
Sbjct: 26  VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 85

Query: 578 C------DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
                  D+  +  LV  +M  GT    L       L   +         +GL Y+H   
Sbjct: 86  FTPDETLDDFTDFYLVMPFM--GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIH--- 138

Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ 691
             GIIHRD+K  N+ ++E+   K+ DFGL++       + ++  V   +           
Sbjct: 139 AAGIIHRDLKPGNLAVNEDCELKILDFGLAR----QADSEMTGYVVTRWYRAPEVILNWM 194

Query: 692 QLTEKSDVYSFGVVLFEVVCAR---------------AVINPTLPKDQINLADWAMKWQK 736
           + T+  D++S G ++ E++  +                 +  T P + +           
Sbjct: 195 RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNY 254

Query: 737 QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEA 794
            + L  +         +  S      + EK L  + + R T GE L H  Y   LH+ 
Sbjct: 255 MKGLPELEKKDFASILTNASPL-AVNLLEKMLVLDAEQRVTAGEALAH-PYFESLHDT 310

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (324), Expect = 2e-33
 Identities = 65/292 (22%), Positives = 114/292 (39%), Gaps = 35/292 (11%)

Query: 509 RVATNNFDESLMIGVGGFGKVFKGE----IEDCTLAAIKRANP----QSEQGLAEFETEI 560
           +V   NF+   ++G G +GKVF        +   L A+K        Q  +      TE 
Sbjct: 20  KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 79

Query: 561 EMLSKLRHR-HLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIG 619
           ++L  +R    LV+L      + ++ L+ +Y+  G L +HL   +             I 
Sbjct: 80  QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE-----VQIY 134

Query: 620 AARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGS 679
               +  L    + GII+RD+K  NILLD N    ++DFGLSK   + E    +    G+
Sbjct: 135 VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER-AYDFCGT 193

Query: 680 FGYLDPEYFWRQQ--LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ 737
             Y+ P+          +  D +S GV+++E++   +   P     + N      +   +
Sbjct: 194 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS---PFTVDGEKNSQAEISRRILK 250

Query: 738 RSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMG-----EVLWH 784
                  +P      S        ++ ++ L  + K R   G     E+  H
Sbjct: 251 S------EPPYPQEMSAL----AKDLIQRLLMKDPKKRLGCGPRDADEIKEH 292

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  126 bits (316), Expect = 3e-32
 Identities = 55/291 (18%), Positives = 107/291 (36%), Gaps = 41/291 (14%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGFC 578
           +G G + +VF+   I +     +K   P  ++   + + EI++L  LR   ++++L    
Sbjct: 43  LGRGKYSEVFEAINITNNEKVVVKILKPVKKK---KIKREIKILENLRGGPNIITLADIV 99

Query: 579 DEQNE--MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGII 636
            +       LV+E++ N   +          LT            + L Y H     GI+
Sbjct: 100 KDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCH---SMGIM 151

Query: 637 HRDVKTTNILLD-ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL-T 694
           HRDVK  N+++D E+   ++ D+GL++                S  +  PE     Q+  
Sbjct: 152 HRDVKPHNVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKGPELLVDYQMYD 208

Query: 695 EKSDVYSFGVVLFEVVCAR-----------------AVINPTLPKDQINLADWAMKWQKQ 737
              D++S G +L  ++  +                  V+      D I+  +  +  +  
Sbjct: 209 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFN 268

Query: 738 RSLKSIIDPHLKGNYSPESLEKFGEIA----EKCLDDEGKNRPTMGEVLWH 784
             L        +     E+       A    +K L  + ++R T  E + H
Sbjct: 269 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (301), Expect = 4e-30
 Identities = 56/298 (18%), Positives = 110/298 (36%), Gaps = 45/298 (15%)

Query: 521 IGVGGFGKVFKG-EIEDCTLAAIKRANP--QSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           IG G  G V    +       AIK+ +   Q++        E+ ++  + H++++SL+  
Sbjct: 25  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84

Query: 578 C------DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGA 631
                  +E  ++ LV E M     +      D      ++          G+ +LH   
Sbjct: 85  FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-----HERMSYLLYQMLCGIKHLH--- 136

Query: 632 ERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQ 691
             GIIHRD+K +NI++  +   K+ DFGL++   +   + + T    +  Y  PE     
Sbjct: 137 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGM 193

Query: 692 QLTEKSDVYSFGVVLFEVVCAR----------------AVINPTLPKDQINLADWAMKWQ 735
              E  D++S G ++ E+V  +                  +    P+    L      + 
Sbjct: 194 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 253

Query: 736 KQR-SLKSIIDPHLKGNYSPESLEKFGEIA--------EKCLDDEGKNRPTMGEVLWH 784
           + R     +  P L  +    +  +  ++          K L  +   R ++ + L H
Sbjct: 254 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 1e-29
 Identities = 57/295 (19%), Positives = 107/295 (36%), Gaps = 33/295 (11%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANP--QSEQGLAEFETEIEMLSKLRHRHLVSLIGF 577
           +G G +G V      +     A+K+ +   QS         E+ +L  ++H +++ L+  
Sbjct: 26  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85

Query: 578 CDEQN-----EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAE 632
                       + +  ++    L + +       LT            RGL Y+H    
Sbjct: 86  FTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIH---S 139

Query: 633 RGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQ 692
             IIHRD+K +N+ ++E+   K+ DFGL++        +V+T     +            
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNWMH 195

Query: 693 LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL------ADWAMKWQKQRSLKSIIDP 746
             +  D++S G ++ E++  R +   T   DQ+ L         A   +K  S  +    
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255

Query: 747 HLKGNYSPESLEK--------FGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHE 793
                    +             ++ EK L  +   R T  + L H  Y  Q H+
Sbjct: 256 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH-AYFAQYHD 309

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  103 bits (258), Expect = 2e-24
 Identities = 43/311 (13%), Positives = 98/311 (31%), Gaps = 50/311 (16%)

Query: 521 IGVGGFGKVFKGE-IEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRH----------- 568
           +G G F  V+  + + + T  A+K      +      E EI++L ++             
Sbjct: 21  LGWGHFSTVWLAKDMVNNTHVAMKIVRG-DKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 79

Query: 569 RHLVSLIGFCDEQNEMILVYEYMANGTLRSHLFGSDL---PPLTWKQRLDACIGAARGLH 625
            H++ L+   + +    +    +      + L          +              GL 
Sbjct: 80  NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLD 139

Query: 626 YLHTGAERGIIHRDVKTTNILLD-ENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLD 684
           Y+H     GIIH D+K  N+L++  +    +    ++  G +  +    T    +  Y  
Sbjct: 140 YMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRS 197

Query: 685 PEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMK----------- 733
           PE          +D++S   ++FE++    +  P          D   +           
Sbjct: 198 PEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSY 257

Query: 734 -WQKQRSLKSIIDPH-------------------LKGNYSPESLEKFGEIAEKCLDDEGK 773
             +  +  ++  +                      K  +S +  ++  +     L  + +
Sbjct: 258 LLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPR 317

Query: 774 NRPTMGEVLWH 784
            R   G ++ H
Sbjct: 318 KRADAGGLVNH 328

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 76.4 bits (187), Expect = 2e-16
 Identities = 30/201 (14%), Positives = 59/201 (29%), Gaps = 42/201 (20%)

Query: 520 MIGVGGFGKVFKGEIEDCTLAAIK----------RANPQSEQGLAEFETEIEMLSKLRHR 569
           ++G G    VF    E      +K          +   + + G   F       ++   R
Sbjct: 7   LMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFR 66

Query: 570 HLVSLIGFCD----EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLH 625
            L  L G             ++ E +    L              +   +        + 
Sbjct: 67  ALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRV---------RVENPDEVLDMILEEVA 117

Query: 626 YLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDP 685
             +    RGI+H D+   N+L+ E  +  + DF  S          V    +G    L+ 
Sbjct: 118 KFY---HRGIVHGDLSQYNVLVSEEGI-WIIDFPQS----------VEVGEEGWREILER 163

Query: 686 EY-----FWRQQLTEKSDVYS 701
           +      ++ +    + D+ S
Sbjct: 164 DVRNIITYFSRTYRTEKDINS 184

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	851
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.84
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.32
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.79
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	96.84
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.3
d2o14a1	146	Hypothetical protein YxiM {Bacillus subtilis [TaxI	96.18
d2o14a1	146	Hypothetical protein YxiM {Bacillus subtilis [TaxI	96.04
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	95.69
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	95.25

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-50  Score=429.08  Aligned_cols=262  Identities=27%  Similarity=0.497  Sum_probs=208.3

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ..++|+..++||+|+||+||+|++++  .||||++...  .....+.|.+|+++|++++|||||+++|++.+ +.++|||
T Consensus         6 ~~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~   82 (276)
T d1uwha_           6 PDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVT   82 (276)
T ss_dssp             CTTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             ccccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEE
Confidence            45778889999999999999998754  4899987643  45667889999999999999999999999865 5689999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      |||++|+|.++|.... ..+++.+++.++.|+|+||+|||+   ++||||||||+||||+.++.+||+|||+++......
T Consensus        83 Ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~---~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~  158 (276)
T d1uwha_          83 QWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS  158 (276)
T ss_dssp             ECCCEEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTSSEEECCCCCSCC-----
T ss_pred             ecCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhc---CCEeccccCHHHEEEcCCCCEEEccccceeeccccC
Confidence            9999999999996543 468999999999999999999996   899999999999999999999999999998755433


Q ss_pred             ccccccccccCCcccCcccccc---cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWR---QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~---~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      .........||+.|||||++.+   ..++.++|||||||+||||+||+.||....+....      ......+    ...
T Consensus       159 ~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~------~~~~~~~----~~~  228 (276)
T d1uwha_         159 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI------IFMVGRG----YLS  228 (276)
T ss_dssp             -------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH------HHHHHHT----SCC
T ss_pred             CcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHH------HHHHhcC----CCC
Confidence            3344456789999999999964   35899999999999999999999999765433221      1111111    111


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      |.+ ...+..+++.+.+|+.+||+.||++|||++|++++|+.+.+
T Consensus       229 p~~-~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         229 PDL-SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             CCG-GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             Ccc-hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            111 12344566789999999999999999999999999997764

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-50  Score=424.77  Aligned_cols=259  Identities=24%  Similarity=0.309  Sum_probs=211.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++|+..+.||+|+||+||+|+.. +++.+|||++.... ....+.+.+|+++|++++|||||++++++.+++..+|||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            57899999999999999999874 67889999986543 33446789999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++|+|.++|...  ..+++.++..++.|++.||+|||+   ++|+||||||+|||+++++.+||+|||+|+........
T Consensus        85 ~~gg~L~~~l~~~--~~l~e~~~~~i~~qi~~al~ylH~---~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~  159 (271)
T d1nvra_          85 CSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  159 (271)
T ss_dssp             CTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             cCCCcHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH---cCCccCcccHHHEEECCCCCEEEccchhheeeccCCcc
Confidence            9999999999643  469999999999999999999995   89999999999999999999999999999875443333


Q ss_pred             ccccccccCCcccCcccccccCC-CchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~-t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                      ......+||+.|||||++.+..+ +.++|||||||+||||++|+.||......... ..    .....         ...
T Consensus       160 ~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~-~~----~~~~~---------~~~  225 (271)
T d1nvra_         160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YS----DWKEK---------KTY  225 (271)
T ss_dssp             CCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHH-HH----HHHTT---------CTT
T ss_pred             ccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHH-HH----HHhcC---------CCC
Confidence            44556789999999999988776 67899999999999999999999754332211 11    11111         111


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      .......++.+.+|+.+||+.||++|||++|+++|         +|++..
T Consensus       226 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h---------pwf~~~  266 (271)
T d1nvra_         226 LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD---------RWYNKP  266 (271)
T ss_dssp             STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC---------TTTTCC
T ss_pred             CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC---------HhhCcC
Confidence            11123445678899999999999999999999999         998753

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-50  Score=422.61  Aligned_cols=258  Identities=28%  Similarity=0.411  Sum_probs=204.6

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .++|+..+.||+|+||+||+|++.+++.||||++.... ...++|.+|++++++++|||||+++|+|..++..++||||+
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~   82 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   82 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             hHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEec
Confidence            35788899999999999999999888889999987643 34578999999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++|+|.+++.... ..++|..+++++.|+|+||+|||+   ++|+||||||+||||+.++.+||+|||+++....... .
T Consensus        83 ~~g~L~~~l~~~~-~~~~~~~~~~i~~qia~gl~~lH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~-~  157 (263)
T d1sm2a_          83 EHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-T  157 (263)
T ss_dssp             TTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCTTCSGGGEEECGGGCEEECSCC------------
T ss_pred             CCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHhhhc---cceeecccchhheeecCCCCeEecccchheeccCCCc-e
Confidence            9999999986543 468899999999999999999995   8999999999999999999999999999986543222 2


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      ......||+.|+|||++.+..++.++|||||||+||||+|++.|+.......  .+.   .... .+         ....
T Consensus       158 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~--~~~---~~i~-~~---------~~~~  222 (263)
T d1sm2a_         158 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVV---EDIS-TG---------FRLY  222 (263)
T ss_dssp             -------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHH--HHH---HHHH-HT---------CCCC
T ss_pred             eecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHH--HHH---HHHH-hc---------CCCC
Confidence            2334578999999999999999999999999999999999765554432221  111   1111 11         1112


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      .+..+++.+.+|+.+||+.||++|||++|++++|+.+++
T Consensus       223 ~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         223 KPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            334556779999999999999999999999999998764

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-49  Score=423.54  Aligned_cols=258  Identities=25%  Similarity=0.402  Sum_probs=212.6

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ..++|+..+.||+|+||+||+|++++++.||||++.... ...+.|.+|+++|++++|||||+++|+|.+ +..++||||
T Consensus        11 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey   88 (272)
T d1qpca_          11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY   88 (272)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             CHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEe
Confidence            456788899999999999999999888899999987543 345689999999999999999999999865 567999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +++|+|.+++......+++|.++++|+.|||+||+|||+   ++|+||||||+||||++++.+||+|||+++..... ..
T Consensus        89 ~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~---~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~-~~  164 (272)
T d1qpca_          89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN-EY  164 (272)
T ss_dssp             CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS-CE
T ss_pred             CCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccchhheeeecccceeeccccceEEccCC-cc
Confidence            999999998866555569999999999999999999995   89999999999999999999999999999875432 22


Q ss_pred             ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          671 HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      .......||+.|+|||++.+..++.++|||||||+||||+||+.|+........  +..   .. ..         ....
T Consensus       165 ~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~--~~~---~i-~~---------~~~~  229 (272)
T d1qpca_         165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQ---NL-ER---------GYRM  229 (272)
T ss_dssp             ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHH---HH-HT---------TCCC
T ss_pred             ccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHH--HHH---HH-Hh---------cCCC
Confidence            233456789999999999999999999999999999999997766554332211  111   11 11         1112


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                      ..+..+++.+.+|+.+||+.||++||||+||++.|+...
T Consensus       230 ~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f  268 (272)
T d1qpca_         230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (272)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhh
Confidence            234456677999999999999999999999999988543

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9.1e-50  Score=427.15  Aligned_cols=260  Identities=23%  Similarity=0.400  Sum_probs=217.3

Q ss_pred             HHHhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          509 RVATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       509 ~~~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      +...++|+..+.||+|+||+||+|++. .++.||||++.... ...++|.+|+++|++++|||||+++|+|.+++..++|
T Consensus        13 ei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (287)
T d1opja_          13 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII   91 (287)
T ss_dssp             BCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             EecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEE
Confidence            344578888999999999999999976 47789999987543 3467899999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      ||||++|+|.++|.......+++..++.++.|+|+||+|||+   ++|+||||||+||||+.++.+||+|||+++.....
T Consensus        92 ~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~  168 (287)
T d1opja_          92 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD  168 (287)
T ss_dssp             EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSS
T ss_pred             eecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHH---CCcccCccccCeEEECCCCcEEEccccceeecCCC
Confidence            999999999999977666789999999999999999999995   89999999999999999999999999999875432


Q ss_pred             CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                       .........||+.|+|||++.+..++.++|||||||++|||++|+.|+........  +.    .         ++...
T Consensus       169 -~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~--~~----~---------~i~~~  232 (287)
T d1opja_         169 -TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VY----E---------LLEKD  232 (287)
T ss_dssp             -SSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HH----H---------HHHTT
T ss_pred             -CceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHH--HH----H---------HHhcC
Confidence             22233445689999999999999999999999999999999998877655433221  11    1         11112


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      .....+..+++.+.+|+.+||+.||++|||++|+++.|+.+
T Consensus       233 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~  273 (287)
T d1opja_         233 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  273 (287)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            22334556677899999999999999999999999887643

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.8e-49  Score=422.37  Aligned_cols=258  Identities=25%  Similarity=0.427  Sum_probs=202.7

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC-c---ceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED-C---TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~-~---~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      ++|+..++||+|+||+||+|+++. +   ..||||++... .....+.|.+|+++|++++|||||+++|+|..++..++|
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            457778899999999999998742 2   35788987654 555667899999999999999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      ||||++|+|.+++.... ..++|.++++++.|+|+||+|||+   ++||||||||+||||+.++.+||+|||+++.....
T Consensus       106 ~Ey~~~g~L~~~~~~~~-~~l~~~~~~~i~~qia~gl~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~  181 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD  181 (299)
T ss_dssp             EECCTTEEHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred             EEecCCCcceeeecccc-CCCCHHHHHHHHHHHHHHHHHHhh---CCCccCccccceEEECCCCcEEECCcccceEccCC
Confidence            99999999999886543 468999999999999999999996   89999999999999999999999999999865432


Q ss_pred             Cccc---cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          668 EHTH---VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       668 ~~~~---~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      ....   ......||+.|||||.+.+..++.++|||||||+||||+| |+.||......+   +..   ...        
T Consensus       182 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~---~~~---~i~--------  247 (299)
T d1jpaa_         182 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD---VIN---AIE--------  247 (299)
T ss_dssp             --------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHH---HHH--------
T ss_pred             CCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHH---HHH---HHH--------
Confidence            2211   1223457999999999999999999999999999999998 788886543221   111   111        


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                        ...+...+..++..+.+|+.+||+.||++|||+.|++++|+.+++
T Consensus       248 --~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         248 --QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             --TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             --cCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence              111223445677889999999999999999999999999998765

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-48  Score=414.64  Aligned_cols=262  Identities=26%  Similarity=0.428  Sum_probs=208.0

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCc-----ceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDC-----TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~-----~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      .+.|+..++||+|+||+||+|.++..     ..||||++... ......+|.+|+++|++++|||||+++|+|.+.+..+
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~   85 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM   85 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence            35688889999999999999987643     36899998654 4455567999999999999999999999999999999


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      +|||||.+|+|.+++.... ..++|.++++++.|++.||+|||+   ++|+||||||+||||+.++.+||+|||+++...
T Consensus        86 ~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~gl~~lH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~  161 (283)
T d1mqba_          86 IITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  161 (283)
T ss_dssp             EEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             EEEEecccCcchhhhhccc-ccccHHHHHHHHHHHHHhhhhccc---cccccCccccceEEECCCCeEEEcccchhhccc
Confidence            9999999999998875443 469999999999999999999995   899999999999999999999999999998644


Q ss_pred             CCC-ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          666 SME-HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       666 ~~~-~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      ... .........||+.|+|||++.+..++.++|||||||+||||++++.|+.......+  +.   ..          +
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~--~~---~~----------i  226 (283)
T d1mqba_         162 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--VM---KA----------I  226 (283)
T ss_dssp             ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HH---HH----------H
T ss_pred             CCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHH--HH---HH----------H
Confidence            322 22233445689999999999999999999999999999999998777654433221  11   11          1


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhh
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH  792 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  792 (851)
                      ....+...+..++..+.+|+.+||+.||++|||+.||++.|+.+++..
T Consensus       227 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p  274 (283)
T d1mqba_         227 NDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP  274 (283)
T ss_dssp             HTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             hccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhCc
Confidence            112223445567788999999999999999999999999999887643

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-49  Score=415.72  Aligned_cols=246  Identities=25%  Similarity=0.397  Sum_probs=207.5

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|++.+.||+|+||+||+|+.. +++.+|+|++...   .....+.+.+|++++++++|||||++++++.+++..+|||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            46899999999999999999975 5788999987643   2234567899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++.++..++.|+++||+|||+   ++||||||||+|||++.++.+||+|||+++..... 
T Consensus        86 Ey~~~g~L~~~l~~~--~~l~e~~~~~i~~qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~-  159 (263)
T d2j4za1          86 EYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-  159 (263)
T ss_dssp             ECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC-
T ss_pred             eecCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeeeeccccceecCCCCEeecccceeeecCCC-
Confidence            999999999998643  368999999999999999999995   89999999999999999999999999999864332 


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                         ......||+.|+|||++.+..++.++|||||||+||||++|+.||......+.      .....         ..  
T Consensus       160 ---~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~------~~~i~---------~~--  219 (263)
T d2j4za1         160 ---RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRIS---------RV--  219 (263)
T ss_dssp             ---CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHH---------TT--
T ss_pred             ---cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHH------HHHHH---------cC--
Confidence               23456799999999999999999999999999999999999999965432211      11111         11  


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      ...++..+++.+.+|+.+||+.||++|||++|+++|
T Consensus       220 ~~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~h  255 (263)
T d2j4za1         220 EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  255 (263)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             CCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcC
Confidence            112344556779999999999999999999999999

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-48  Score=417.29  Aligned_cols=255  Identities=22%  Similarity=0.343  Sum_probs=214.1

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      ++|+..+.||+|+||+||+|+. .+++.||||++........+.+.+|+++|++++|||||++++++..++..+|||||+
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            5799999999999999999986 467899999987655555678999999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++|+|.+++...   .+++.++..++.|++.||+|||+   ++||||||||+|||++.++.+||+|||+++......  .
T Consensus       100 ~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~--~  171 (293)
T d1yhwa1         100 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--S  171 (293)
T ss_dssp             TTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT--C
T ss_pred             CCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCcHHHeEECCCCcEeeccchhheeecccc--c
Confidence            999999987543   58999999999999999999995   899999999999999999999999999998643322  2


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.      ........      .+  ...
T Consensus       172 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~------~~~~~~~~------~~--~~~  237 (293)
T d1yhwa1         172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA------LYLIATNG------TP--ELQ  237 (293)
T ss_dssp             CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHHC------SC--CCS
T ss_pred             cccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHH------HHHHHhCC------CC--CCC
Confidence            23456799999999999999999999999999999999999999975432211      11111111      01  112


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      .+..+++.+++|+.+||+.||.+|||++|+++|         +|++.
T Consensus       238 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H---------p~~~~  275 (293)
T d1yhwa1         238 NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH---------QFLKI  275 (293)
T ss_dssp             SGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC---------GGGGG
T ss_pred             CcccCCHHHHHHHHHHccCChhHCcCHHHHhcC---------HhhCC
Confidence            334566779999999999999999999999999         99864

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-48  Score=423.67  Aligned_cols=258  Identities=24%  Similarity=0.405  Sum_probs=210.3

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcCc------ceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCC
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIEDC------TLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQN  582 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~~------~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~  582 (851)
                      ..++|+..++||+|+||+||+|+....      ..||+|++... .......+.+|+.+|+++ +|||||+++++|...+
T Consensus        35 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~  114 (325)
T d1rjba_          35 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  114 (325)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC
Confidence            457899999999999999999986532      35788987654 344556789999999998 8999999999999999


Q ss_pred             cEEEEEEecCCcchhhhccCCC---------------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCC
Q 047215          583 EMILVYEYMANGTLRSHLFGSD---------------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVK  641 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~---------------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk  641 (851)
                      ..+||||||++|+|.++|+...                     ...+++.+++.++.|+++||+|||+   ++|||||||
T Consensus       115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~---~~IiHRDlK  191 (325)
T d1rjba_         115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA  191 (325)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCS
T ss_pred             eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCc
Confidence            9999999999999999996543                     2358999999999999999999996   899999999


Q ss_pred             CCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCC
Q 047215          642 TTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTL  720 (851)
Q Consensus       642 ~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~  720 (851)
                      |+|||++.++.+||+|||+|+...............||+.|||||++.+..++.++|||||||+||||+| |+.||....
T Consensus       192 p~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~  271 (325)
T d1rjba_         192 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  271 (325)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC
Confidence            9999999999999999999986544333333455678999999999999999999999999999999998 888887543


Q ss_pred             CcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          721 PKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       721 ~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      ....  +..             ++....+...+..+++.+.+|+.+||+.||++|||++||++||.
T Consensus       272 ~~~~--~~~-------------~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         272 VDAN--FYK-------------LIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             CSHH--HHH-------------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHH--HHH-------------HHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            3221  111             11111223345566778999999999999999999999999985

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-48  Score=415.59  Aligned_cols=257  Identities=27%  Similarity=0.420  Sum_probs=213.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      +.|++.+.||+|+||+||+|+.. ++..+|||++........+.|.+|+++|++++|||||++++++..++..+||||||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            56888999999999999999874 57889999988777777788999999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++|+|.+++.... .++++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++....  ...
T Consensus        92 ~~g~L~~~~~~~~-~~l~e~~~~~i~~qi~~gL~ylH~---~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~--~~~  165 (288)
T d2jfla1          92 AGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR--TIQ  165 (288)
T ss_dssp             TTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECHH--HHH
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEEEeecChhheeECCCCCEEEEechhhhccCC--Ccc
Confidence            9999999875432 468999999999999999999995   8999999999999999999999999999875321  112


Q ss_pred             cccccccCCcccCccccc-----ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          672 VSTAVKGSFGYLDPEYFW-----RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~-----~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                      ......||+.|+|||++.     ...|+.++|||||||+||||+||+.||....+.+..      ..... ...     +
T Consensus       166 ~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~------~~i~~-~~~-----~  233 (288)
T d2jfla1         166 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVL------LKIAK-SEP-----P  233 (288)
T ss_dssp             HHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH------HHHHH-SCC-----C
T ss_pred             cccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHH------HHHHc-CCC-----C
Confidence            234567999999999984     456899999999999999999999999765443221      11111 100     1


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      .  ...+..+++.+.+|+.+||+.||.+|||++|+++|         +|++.
T Consensus       234 ~--~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h---------p~~~~  274 (288)
T d2jfla1         234 T--LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH---------PFVTV  274 (288)
T ss_dssp             C--CSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS---------GGGCC
T ss_pred             C--CCccccCCHHHHHHHHHHccCChhHCcCHHHHhcC---------cccCC
Confidence            1  12234556779999999999999999999999999         99863

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-48  Score=407.32  Aligned_cols=254  Identities=28%  Similarity=0.392  Sum_probs=212.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .++|+..++||+|+||+||+|+++++..||||++..... ..++|.+|+.++++++||||++++|+|.+++..++||||+
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~   81 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM   81 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred             hHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence            368889999999999999999998888999999876433 3578999999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++|+|.+++.... ..+++..+.+++.|+|+||.|||+   ++|+||||||+|||++.++.+||+|||+++....... .
T Consensus        82 ~~g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~---~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~-~  156 (258)
T d1k2pa_          82 ANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-T  156 (258)
T ss_dssp             TTEEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHH---TTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSC-C
T ss_pred             CCCcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhh---cCcccccccceeEEEcCCCcEEECcchhheeccCCCc-e
Confidence            9999999875543 458899999999999999999995   8999999999999999999999999999986443222 2


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      ......||+.|+|||.+.+..++.++|||||||++|||+| |+.||......+   +   .... ..+         .+.
T Consensus       157 ~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~---~---~~~i-~~~---------~~~  220 (258)
T d1k2pa_         157 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE---T---AEHI-AQG---------LRL  220 (258)
T ss_dssp             CCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH---H---HHHH-HTT---------CCC
T ss_pred             eecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH---H---HHHH-HhC---------CCC
Confidence            2334668999999999999999999999999999999998 788886543221   1   1111 111         112


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEY  787 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  787 (851)
                      ..+..+++.+.+|+.+||+.||++|||++|+++||.+
T Consensus       221 ~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         221 YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             CCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            2334556779999999999999999999999999853

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-47  Score=408.10  Aligned_cols=257  Identities=24%  Similarity=0.377  Sum_probs=209.4

Q ss_pred             hcCCceee-eeeeecceEEEEEEEc---CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          512 TNNFDESL-MIGVGGFGKVFKGEIE---DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       512 t~~f~~~~-~LG~G~fG~Vykg~~~---~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .++|...+ +||+|+||+||+|.++   ++..||||++... .....+.|.+|+++|++++|||||+++|+|.. +..+|
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~l   85 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML   85 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEE
Confidence            35566666 4999999999999764   3457899998765 44556789999999999999999999999965 56899


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      |||||++|+|.+++.... ..+++.++.+++.|+|+||+|||+   ++|+||||||+||||+.++.+||+|||+++....
T Consensus        86 vmE~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~  161 (285)
T d1u59a_          86 VMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA  161 (285)
T ss_dssp             EEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             EEEeCCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCcCchhheeeccCCceeeccchhhhcccc
Confidence            999999999999875443 468999999999999999999996   8999999999999999999999999999987543


Q ss_pred             CCcc-ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          667 MEHT-HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       667 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      .... .......||+.|+|||++....++.++|||||||++|||+| |+.||......+   +..    ....+      
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~---~~~----~i~~~------  228 (285)
T d1u59a_         162 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VMA----FIEQG------  228 (285)
T ss_dssp             CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH---HHH----HHHTT------
T ss_pred             cccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHH---HHH----HHHcC------
Confidence            3222 22344568999999999999999999999999999999998 899987543321   111    11111      


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                         .+...++.+++.+.+|+.+||+.||++|||+.+|++.|+...
T Consensus       229 ---~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~  270 (285)
T d1u59a_         229 ---KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY  270 (285)
T ss_dssp             ---CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---CCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence               112345567778999999999999999999999999887553

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-48  Score=412.93  Aligned_cols=254  Identities=24%  Similarity=0.361  Sum_probs=196.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc--CCcEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--QNEMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~--~~~~~lV  587 (851)
                      ++|+..+.||+|+||+||+|+.. +++.+|+|++...  .....+.+.+|+++|++++|||||++++++.+  ++.++||
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            67999999999999999999864 6788999988654  44556779999999999999999999999853  5678999


Q ss_pred             EEecCCcchhhhccCC--CCCCCchhhhHHHHHHHHHHHHHhhcCC--CCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          588 YEYMANGTLRSHLFGS--DLPPLTWKQRLDACIGAARGLHYLHTGA--ERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLHs~~--~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      |||+++|+|.+++...  ....+++.+++.++.|++.||+|||+..  ..+||||||||+||||+.++.+||+|||+++.
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence            9999999999998542  3457999999999999999999999621  23599999999999999999999999999987


Q ss_pred             CCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      ....  ........||+.|||||++.+..++.++|||||||++|||+||+.||......+   +.   ... ..+..   
T Consensus       164 ~~~~--~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~---~~---~~i-~~~~~---  231 (269)
T d2java1         164 LNHD--TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE---LA---GKI-REGKF---  231 (269)
T ss_dssp             C-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HH---HHH-HHTCC---
T ss_pred             cccC--CCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHH---HH---HHH-HcCCC---
Confidence            4332  223345789999999999999999999999999999999999999997543211   11   111 11111   


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                        +    ..+...++.+.+|+.+||+.||.+|||++|+++|
T Consensus       232 --~----~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h  266 (269)
T d2java1         232 --R----RIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN  266 (269)
T ss_dssp             --C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             --C----CCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence              1    2233455679999999999999999999999999

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-48  Score=407.68  Aligned_cols=245  Identities=26%  Similarity=0.413  Sum_probs=197.2

Q ss_pred             ceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc----CCcEEEEE
Q 047215          516 DESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE----QNEMILVY  588 (851)
Q Consensus       516 ~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~----~~~~~lV~  588 (851)
                      +..++||+|+||+||+|+.. ++..||+|++...  .....+.|.+|+++|++++|||||++++++..    +..++|||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            45668999999999999875 5678899987643  44556789999999999999999999999854    45689999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCC--eEEcCCCCCCeEEc-CCCeEEEeeccccccCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERG--IIHRDVKTTNILLD-ENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~--iiHrDlk~~NILld-~~~~~kl~DFGla~~~~  665 (851)
                      ||+++|+|.+++...  ..+++.++..++.|+++||+|||+   ++  |+||||||+||||+ +++.+||+|||+++...
T Consensus        92 E~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~gl~yLH~---~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~  166 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  166 (270)
T ss_dssp             ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             eCCCCCcHHHHHhcc--ccccHHHHHHHHHHHHHHHHHHHH---CCCCEEeCCcChhhceeeCCCCCEEEeecCcceecc
Confidence            999999999999543  468999999999999999999995   55  99999999999996 57899999999998632


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      .    .......||+.|||||++.+ +++.++|||||||+||||++|+.||........  +   .... ..+       
T Consensus       167 ~----~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~--~---~~~i-~~~-------  228 (270)
T d1t4ha_         167 A----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--I---YRRV-TSG-------  228 (270)
T ss_dssp             T----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--H---HHHH-TTT-------
T ss_pred             C----CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH--H---HHHH-HcC-------
Confidence            2    22345689999999999865 699999999999999999999999965432211  1   1111 111       


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                       .....++...++.+.+|+.+||+.||++|||++|+++|
T Consensus       229 -~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H  266 (270)
T d1t4ha_         229 -VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  266 (270)
T ss_dssp             -CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             -CCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence             00111223345568999999999999999999999999

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-48  Score=426.02  Aligned_cols=265  Identities=23%  Similarity=0.311  Sum_probs=207.0

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ..++|+..++||+|+||+||+|+.. +++.+|+|++... .......+.+|+.+|++++|||||+++++|.++++++|||
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm   83 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   83 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            3578999999999999999999964 6788999998654 3444578999999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      |||++|+|.+++...  ..+++.++..++.|++.||.|||+  .++|+||||||+||||+.++.+||+|||+|+...   
T Consensus        84 Ey~~gg~L~~~l~~~--~~l~~~~~~~~~~qil~aL~yLH~--~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~---  156 (322)
T d1s9ja_          84 EHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---  156 (322)
T ss_dssp             ECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH---
T ss_pred             EcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHH--hCCEEccccCHHHeeECCCCCEEEeeCCCccccC---
Confidence            999999999999654  358999999999999999999996  3589999999999999999999999999998532   


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHH-HHHHHH--------h----
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLA-DWAMKW--------Q----  735 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~-~~~~~~--------~----  735 (851)
                       ........||+.|+|||++.+.+|+.++||||+||++|||++|+.||.+....+..... ......        .    
T Consensus       157 -~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (322)
T d1s9ja_         157 -DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR  235 (322)
T ss_dssp             -HHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC--------------------
T ss_pred             -CCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccc
Confidence             12234568999999999999999999999999999999999999999765432210000 000000        0    


Q ss_pred             ------hh----cc----cccccCccCCCCCC-hhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          736 ------KQ----RS----LKSIIDPHLKGNYS-PESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       736 ------~~----~~----~~~i~d~~l~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                            ..    ..    ...+... .....+ ...+..+.+|+.+||+.||.+|||++|+|+|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H  298 (322)
T d1s9ja_         236 PLSSYGMDSRPPMAIFELLDYIVNE-PPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  298 (322)
T ss_dssp             ----------CCCCHHHHHHHHHTS-CCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccccccchhHHHHHhhhhcc-CCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence                  00    00    0000000 000111 1234668999999999999999999999999

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-47  Score=406.13  Aligned_cols=248  Identities=25%  Similarity=0.360  Sum_probs=199.7

Q ss_pred             eeeeeecceEEEEEEEcC---cceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEecCC
Q 047215          519 LMIGVGGFGKVFKGEIED---CTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYMAN  593 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~---~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~~~  593 (851)
                      ++||+|+||+||+|.+++   ++.||||++...  +....+.|.+|+++|++++|||||+++|+|.. +..+|||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            479999999999998653   357899998654  33445789999999999999999999999965 467899999999


Q ss_pred             cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc-ccc
Q 047215          594 GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH-THV  672 (851)
Q Consensus       594 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~-~~~  672 (851)
                      |+|.+++...  .++++.++++++.|||.||+|||+   ++||||||||+||||+.++.+||+|||+++....... ...
T Consensus        92 g~L~~~l~~~--~~l~~~~~~~i~~qi~~gl~ylH~---~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~  166 (277)
T d1xbba_          92 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA  166 (277)
T ss_dssp             EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC
T ss_pred             CcHHHHHhhc--cCCCHHHHHHHHHHHHHHHhhHHh---CCcccCCCcchhhcccccCcccccchhhhhhcccccccccc
Confidence            9999998654  468999999999999999999995   8999999999999999999999999999986543322 222


Q ss_pred             ccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          673 STAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       673 ~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      .....||+.|+|||.+.+..++.++|||||||++|||+| |+.||......+   +..    ....+         .+..
T Consensus       167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~---~~~----~i~~~---------~~~~  230 (277)
T d1xbba_         167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VTA----MLEKG---------ERMG  230 (277)
T ss_dssp             ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHH----HHHTT---------CCCC
T ss_pred             ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHH---HHH----HHHcC---------CCCC
Confidence            344678999999999999999999999999999999998 888887543221   111    11111         1223


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      .+..++..+.+|+.+||+.||++|||+++|++.|+..
T Consensus       231 ~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         231 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence            4456677899999999999999999999998887643

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-47  Score=412.75  Aligned_cols=264  Identities=22%  Similarity=0.355  Sum_probs=208.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-Ccc----eeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCT----LAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~----~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~l  586 (851)
                      .+|+..++||+|+||+||+|++. +++    .||+|++... +.+..++|.+|+++|++++|||||+++|+|.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            46999999999999999999864 332    5788887654 445677899999999999999999999999864 5788


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCC
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~  666 (851)
                      ++||+.+|+|.+.+... ...+++.++++++.|||.||+|||+   ++||||||||+||||+.++.+||+|||+++....
T Consensus        88 v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~yLH~---~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  163 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  163 (317)
T ss_dssp             EEECCTTCBHHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTT
T ss_pred             EEEeccCCccccccccc-ccCCCHHHHHHHHHHHHHHHHHHHH---cCcccCcchhhcceeCCCCCeEeeccccceeccc
Confidence            89999999999887654 3568999999999999999999996   8999999999999999999999999999987554


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                      ...........||+.|+|||++.+..++.++|||||||+||||+| |+.||......+   +....    ..        
T Consensus       164 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~---~~~~i----~~--------  228 (317)
T d1xkka_         164 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSIL----EK--------  228 (317)
T ss_dssp             TCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG---HHHHH----HH--------
T ss_pred             ccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH---HHHHH----Hc--------
Confidence            333333445678999999999999999999999999999999999 666765443222   11111    11        


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcc
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMR  797 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~  797 (851)
                       ..+...++.+++.+.+|+.+||+.||.+|||+.|++++|+.+.+....+..
T Consensus       229 -~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~~~~~~~  279 (317)
T d1xkka_         229 -GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV  279 (317)
T ss_dssp             -TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSHHHHBC
T ss_pred             -CCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhChHhhcc
Confidence             112234456677899999999999999999999999999988766555543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-47  Score=409.69  Aligned_cols=254  Identities=30%  Similarity=0.447  Sum_probs=205.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      .++|++.+.||+|+||+||+|+++++..||||++.... ...+.|.+|+.+|++++|||||+++|+|.+ +..++||||+
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~   93 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM   93 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEec
Confidence            46789999999999999999999888889999987543 345789999999999999999999999954 5689999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++|+|..++.......++|.+++.++.|||.||+|||+   .+|+||||||+||||+.++.+||+|||+++..... ...
T Consensus        94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~---~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~-~~~  169 (285)
T d1fmka3          94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYT  169 (285)
T ss_dssp             TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred             CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhh---hheecccccceEEEECCCCcEEEcccchhhhccCC-Cce
Confidence            99999999876555679999999999999999999995   89999999999999999999999999999864332 222


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGN  751 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  751 (851)
                      ......||+.|+|||++....++.++|||||||+||||+||+.|+.......+  ...+   ..          ......
T Consensus       170 ~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~--~~~~---i~----------~~~~~~  234 (285)
T d1fmka3         170 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQ---VE----------RGYRMP  234 (285)
T ss_dssp             ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHH---HH----------TTCCCC
T ss_pred             eeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHH--HHHH---HH----------hcCCCC
Confidence            23446789999999999999999999999999999999998776654432211  1111   11          111223


Q ss_pred             CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 047215          752 YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLE  786 (851)
Q Consensus       752 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  786 (851)
                      .+..+++.+.+++.+||+.||++|||+++|++.|+
T Consensus       235 ~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~  269 (285)
T d1fmka3         235 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE  269 (285)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHh
Confidence            45566778999999999999999999999988766

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=9e-47  Score=414.46  Aligned_cols=259  Identities=21%  Similarity=0.305  Sum_probs=215.8

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      ++|++.+.||+|+||.||+|+. .++..+|||++........+.+.+|+++|++++|||||++++++.+++.++||||||
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            5799999999999999999986 467899999998777777788999999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc--CCCeEEEeeccccccCCCCCc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD--ENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld--~~~~~kl~DFGla~~~~~~~~  669 (851)
                      ++|+|.+++.... ..+++.++..++.||+.||+|||+   ++||||||||+|||++  .++.+||+|||+++.....  
T Consensus       106 ~gg~L~~~l~~~~-~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~--  179 (350)
T d1koaa2         106 SGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK--  179 (350)
T ss_dssp             CSCBHHHHHTCTT-SCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT--
T ss_pred             CCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh---cCCeeeeechhHeeeccCCCCeEEEeecchheecccc--
Confidence            9999999985443 469999999999999999999995   9999999999999995  4688999999999864332  


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                       .......||+.|||||++.+..++.++|||||||++|||++|+.||......+      .........       ....
T Consensus       180 -~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~~~-------~~~~  245 (350)
T d1koaa2         180 -QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE------TLRNVKSCD-------WNMD  245 (350)
T ss_dssp             -SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTC-------CCSC
T ss_pred             -cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-------CCCC
Confidence             22345679999999999999999999999999999999999999997543221      111111110       1111


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCC
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDD  800 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~  800 (851)
                      ......+++.+++|+.+||+.||++|||++|+++|         +|++...
T Consensus       246 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h---------p~~~~~~  287 (350)
T d1koaa2         246 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH---------PWLTPGN  287 (350)
T ss_dssp             CGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS---------TTTSCTT
T ss_pred             cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC---------cccCCCC
Confidence            11223455678999999999999999999999999         8987543

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-47  Score=410.77  Aligned_cols=261  Identities=21%  Similarity=0.304  Sum_probs=210.5

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|++.+.||+|+||+||+|+.. +++.+|||++...   .....+.+.+|+++|++++|||||++++++.+++..+|||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            57999999999999999999874 6788999987643   2334567999999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+++|+|.+++...  ..+++.++..++.|++.||+|||+   ++||||||||+|||+++++.+||+|||+|+......
T Consensus        88 Ey~~gg~L~~~~~~~--~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~  162 (288)
T d1uu3a_          88 SYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES  162 (288)
T ss_dssp             CCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             EccCCCCHHHhhhcc--CCCCHHHHHHHHHHHHHHHHhhcc---ccEEcCcCCccccccCCCceEEecccccceecccCC
Confidence            999999999988543  468999999999999999999995   899999999999999999999999999998755433


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                      ........+||+.|+|||++.+..++.++|||||||+||||++|+.||....+.+   +.   ..         +...  
T Consensus       163 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~---~~---~~---------i~~~--  225 (288)
T d1uu3a_         163 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL---IF---QK---------IIKL--  225 (288)
T ss_dssp             -------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH---HH---------HHTT--
T ss_pred             cccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHH---HH---HH---------HHcC--
Confidence            3334456689999999999999999999999999999999999999997643221   11   11         1111  


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      ...++...++.+++|+.+||+.||++|||++|++++.+ ++  ..+|++.
T Consensus       226 ~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~-i~--~Hpff~~  272 (288)
T d1uu3a_         226 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP-LK--AHPFFES  272 (288)
T ss_dssp             CCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHH-HH--TSGGGTT
T ss_pred             CCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHH-HH--cCCccCC
Confidence            11233455667899999999999999999999877633 21  2377764

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.9e-47  Score=412.34  Aligned_cols=266  Identities=26%  Similarity=0.430  Sum_probs=215.7

Q ss_pred             HHHHHHHhcCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEE
Q 047215          505 LAEIRVATNNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGF  577 (851)
Q Consensus       505 ~~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~  577 (851)
                      +.+++...++|+..+.||+|+||+||+|++.      +++.||||++... ..+..++|.+|+++|++++||||++++++
T Consensus         5 ~~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~   84 (301)
T d1lufa_           5 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV   84 (301)
T ss_dssp             HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             hhhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceee
Confidence            3455667789999999999999999999864      3468999998765 34456789999999999999999999999


Q ss_pred             EccCCcEEEEEEecCCcchhhhccCCC----------------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCe
Q 047215          578 CDEQNEMILVYEYMANGTLRSHLFGSD----------------------LPPLTWKQRLDACIGAARGLHYLHTGAERGI  635 (851)
Q Consensus       578 ~~~~~~~~lV~Ey~~~gsL~~~L~~~~----------------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~i  635 (851)
                      |...+..++||||+++|+|.++|+...                      ...+++.+++.++.|++.||+|||+   +++
T Consensus        85 ~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~---~~i  161 (301)
T d1lufa_          85 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKF  161 (301)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTC
T ss_pred             eccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc---CCe
Confidence            999999999999999999999985321                      2358899999999999999999995   899


Q ss_pred             EEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCc-
Q 047215          636 IHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA-  714 (851)
Q Consensus       636 iHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~-  714 (851)
                      |||||||+|||||.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||+||||++|.. 
T Consensus       162 vHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~  241 (301)
T d1lufa_         162 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ  241 (301)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             EeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCC
Confidence            9999999999999999999999999986443333334455678999999999999999999999999999999999975 


Q ss_pred             CCCCCCCcchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          715 VINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       715 p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                      |+......+   +   .... ..+.         ....+..++..+.+|+.+||+.||++||||.||++.|+.+.
T Consensus       242 p~~~~~~~e---~---~~~v-~~~~---------~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         242 PYYGMAHEE---V---IYYV-RDGN---------ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             TTTTSCHHH---H---HHHH-HTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CCCCCCHHH---H---HHHH-HcCC---------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            444332211   1   1111 1111         12234556678999999999999999999999999988653

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.3e-47  Score=410.86  Aligned_cols=257  Identities=24%  Similarity=0.393  Sum_probs=197.3

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC-hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS-EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .+.|+..++||+|+||+||+|+.. +++.+|||++.... ......+.+|+++|++++|||||++++++.+++.++||||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            467999999999999999999875 57889999986543 2334568899999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc---CCCeEEEeeccccccCCC
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGLSKTGPS  666 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld---~~~~~kl~DFGla~~~~~  666 (851)
                      ||++|+|.++|...  ..+++.++..++.|++.||+|||+   ++|+||||||+|||+.   +++.+||+|||+++....
T Consensus        88 ~~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~  162 (307)
T d1a06a_          88 LVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP  162 (307)
T ss_dssp             CCCSCBHHHHHHTC--SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCC--------
T ss_pred             ccCCCcHHHhhhcc--cCCCHHHHHHHHHHHHHHHHhhhh---ceeeeEEecccceeecccCCCceEEEeccceeEEccC
Confidence            99999999999653  469999999999999999999995   8999999999999994   578999999999986432


Q ss_pred             CCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCc
Q 047215          667 MEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDP  746 (851)
Q Consensus       667 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  746 (851)
                         .......+||+.|||||++.+..++.++|||||||+||||++|+.||......+   +..   .... .      +.
T Consensus       163 ---~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~---~~~---~i~~-~------~~  226 (307)
T d1a06a_         163 ---GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK---LFE---QILK-A------EY  226 (307)
T ss_dssp             -------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHH---HHHT-T------CC
T ss_pred             ---CCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHH---HHH---HHhc-c------CC
Confidence               222345679999999999999999999999999999999999999997543221   111   1111 0      11


Q ss_pred             cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          747 HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       747 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      .......+..++.+.+|+.+||+.||.+|||++|+++|         +|++.
T Consensus       227 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h---------p~~~~  269 (307)
T d1a06a_         227 EFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH---------PWIAG  269 (307)
T ss_dssp             CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS---------TTTTS
T ss_pred             CCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC---------HhhCC
Confidence            11222334556779999999999999999999999999         99864

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=3.3e-46  Score=410.33  Aligned_cols=258  Identities=19%  Similarity=0.307  Sum_probs=215.4

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey~  591 (851)
                      ++|++.+.||+|+||.||+|+. .++..+|||++..........+.+|+++|++++|||||++++++.+++.++||||||
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            5799999999999999999986 468899999988776666778899999999999999999999999999999999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc--CCCeEEEeeccccccCCCCCc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD--ENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld--~~~~~kl~DFGla~~~~~~~~  669 (851)
                      ++|+|.+.+... ..++++.++..++.||+.||+|||+   ++||||||||+||||+  .++.+||+|||+|+.....  
T Consensus       109 ~gg~L~~~~~~~-~~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~--  182 (352)
T d1koba_         109 SGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD--  182 (352)
T ss_dssp             CCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT--
T ss_pred             CCChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccccccccccccCCCeEEEeecccceecCCC--
Confidence            999999877543 3469999999999999999999995   9999999999999997  6789999999999875432  


Q ss_pred             cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                       .......||+.|+|||++.+..++.++|||||||+||||+||+.||......+.      ..... ..      +....
T Consensus       183 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~------~~~i~-~~------~~~~~  248 (352)
T d1koba_         183 -EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET------LQNVK-RC------DWEFD  248 (352)
T ss_dssp             -SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH------HHHHH-HC------CCCCC
T ss_pred             -CceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHH-hC------CCCCC
Confidence             233456799999999999999999999999999999999999999975432211      11111 11      11111


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      .......++.+.+|+.+||+.||.+|||++|+++|         +|++..
T Consensus       249 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H---------p~~~~~  289 (352)
T d1koba_         249 EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH---------PWLKGD  289 (352)
T ss_dssp             SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS---------TTTSSC
T ss_pred             cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC---------HhhCCC
Confidence            22233455678999999999999999999999999         898753

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-47  Score=406.86  Aligned_cols=268  Identities=24%  Similarity=0.386  Sum_probs=207.2

Q ss_pred             HHHHHHhcCCceeeeeeeecceEEEEEEEcC------cceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEE
Q 047215          506 AEIRVATNNFDESLMIGVGGFGKVFKGEIED------CTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGF  577 (851)
Q Consensus       506 ~~l~~~t~~f~~~~~LG~G~fG~Vykg~~~~------~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~  577 (851)
                      .+++...++|+..++||+|+||.||+|+...      ++.||||++... .....+.+.+|...+.++ +|+||+.++++
T Consensus         6 ~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~   85 (299)
T d1ywna1           6 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA   85 (299)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeee
Confidence            4445556789999999999999999998642      357899998754 445566788888888887 68999999999


Q ss_pred             Ecc-CCcEEEEEEecCCcchhhhccCCC--------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCC
Q 047215          578 CDE-QNEMILVYEYMANGTLRSHLFGSD--------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKT  642 (851)
Q Consensus       578 ~~~-~~~~~lV~Ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~  642 (851)
                      +.. +..+++|||||++|+|.++|+...              ...+++.+++.++.|+++||+|||+   ++||||||||
T Consensus        86 ~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~~ivHrDlKp  162 (299)
T d1ywna1          86 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAA  162 (299)
T ss_dssp             ECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCG
T ss_pred             eccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHh---CCCcCCcCCc
Confidence            865 456899999999999999986432              2458999999999999999999996   8999999999


Q ss_pred             CCeEEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCc-CCCCCCC
Q 047215          643 TNILLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA-VINPTLP  721 (851)
Q Consensus       643 ~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~-p~~~~~~  721 (851)
                      +||||+.++.+||+|||+|+...............||+.|+|||++.+..++.++|||||||++|||+||.. ||.....
T Consensus       163 ~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~  242 (299)
T d1ywna1         163 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  242 (299)
T ss_dssp             GGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred             cceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCH
Confidence            999999999999999999987554444444456789999999999999999999999999999999999865 5543322


Q ss_pred             cchhcHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          722 KDQINLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       722 ~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      .+.      .......+         .....+..+++.+.+++.+||+.||++|||++|+++||+.+++.
T Consensus       243 ~~~------~~~~~~~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         243 DEE------FCRRLKEG---------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             SHH------HHHHHHHT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHH------HHHHHhcC---------CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            211      11111111         11233445667799999999999999999999999999988764

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.8e-47  Score=410.47  Aligned_cols=246  Identities=27%  Similarity=0.393  Sum_probs=202.6

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCC---hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQS---EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ..|+..+.||+|+||+||+|+. .+++.||||++....   ....+.+.+|+++|++++|||||++++++.+++..+|||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            3588899999999999999986 467889999876543   344567999999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      |||++|+|..++...  .++++.++..++.||+.||.|||+   ++||||||||+||||+.++.+||+|||+++....  
T Consensus        95 E~~~~g~l~~~~~~~--~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~--  167 (309)
T d1u5ra_          95 EYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--  167 (309)
T ss_dssp             ECCSEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS--
T ss_pred             EecCCCchHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEECCCCCEEEeecccccccCC--
Confidence            999999997766433  468999999999999999999995   8999999999999999999999999999986322  


Q ss_pred             ccccccccccCCcccCcccccc---cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWR---QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID  745 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~---~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d  745 (851)
                          .....||+.|||||++.+   ..|+.++|||||||++|||++|+.||......+.      ...... +.     .
T Consensus       168 ----~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~------~~~i~~-~~-----~  231 (309)
T d1u5ra_         168 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQ-NE-----S  231 (309)
T ss_dssp             ----BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHH-SC-----C
T ss_pred             ----CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHH------HHHHHh-CC-----C
Confidence                234579999999999864   4689999999999999999999999875432211      111111 10     1


Q ss_pred             ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          746 PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       746 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +.+   .+...++.+.+|+.+||+.||.+|||++|+++|
T Consensus       232 ~~~---~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         232 PAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             CCC---SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             CCC---CCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhC
Confidence            111   123345679999999999999999999999999

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-47  Score=407.33  Aligned_cols=263  Identities=21%  Similarity=0.321  Sum_probs=210.3

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC------ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ------SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~------~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      ++|+..+.||+|+||+||+|+. .+++.+|||++...      .....+.+.+|+.+|++++|||||++++++.+++.++
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            6799999999999999999997 46789999987543      1223578999999999999999999999999999999


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC----eEEEeecccc
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF----VAKMSDFGLS  661 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~----~~kl~DFGla  661 (851)
                      ||||||++|+|.++|...  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++    .+||+|||++
T Consensus        90 iv~E~~~gg~L~~~i~~~--~~l~~~~~~~~~~qi~~al~yLH~---~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a  164 (293)
T d1jksa_          90 LILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  164 (293)
T ss_dssp             EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEEcCCCccccchhccc--cccchhHHHHHHHHHHHHHHhhhh---cceeecccccceEEEecCCCcccceEecchhhh
Confidence            999999999999998553  369999999999999999999995   8999999999999998766    5999999999


Q ss_pred             ccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK  741 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  741 (851)
                      +.....   .......||+.|+|||++.+..++.++|||||||+||||++|+.||......+.      ...... ..  
T Consensus       165 ~~~~~~---~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~------~~~i~~-~~--  232 (293)
T d1jksa_         165 HKIDFG---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET------LANVSA-VN--  232 (293)
T ss_dssp             EECTTS---CBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHT-TC--
T ss_pred             hhcCCC---ccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHH------HHHHHh-cC--
Confidence            864322   223456789999999999999999999999999999999999999976432211      111111 00  


Q ss_pred             cccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCCCCCCc
Q 047215          742 SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDDRQNSF  805 (851)
Q Consensus       742 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~~~~~~  805 (851)
                          .......+..++..+++|+.+||+.||++|||++|+++|         +|++..+.+...
T Consensus       233 ----~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h---------p~~~~~~~~~~l  283 (293)
T d1jksa_         233 ----YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH---------PWIKPKDTQQAL  283 (293)
T ss_dssp             ----CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS---------TTTCC-------
T ss_pred             ----CCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC---------cccCCCChhHhh
Confidence                001111112345678999999999999999999999999         999765544433

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-47  Score=401.73  Aligned_cols=259  Identities=24%  Similarity=0.347  Sum_probs=201.9

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcC----cceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIED----CTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~----~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      ..++|+..+.||+|+||.||+|++..    +..||||.+... .....+.|.+|+++|++++|||||+++|+|. ++..+
T Consensus         5 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~   83 (273)
T d1mp8a_           5 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW   83 (273)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred             CHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEE
Confidence            34678999999999999999998643    346788888654 4445678999999999999999999999996 46789


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      +||||+++|+|.+++.... ..+++.+++.++.|+++||+|||+   ++||||||||+|||++.++.+||+|||+++...
T Consensus        84 iv~E~~~~g~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~  159 (273)
T d1mp8a_          84 IIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME  159 (273)
T ss_dssp             EEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred             EEEEeccCCcHHhhhhccC-CCCCHHHHHHHHHHHHHHhhhhcc---cCeeccccchhheeecCCCcEEEccchhheecc
Confidence            9999999999999875443 468999999999999999999995   899999999999999999999999999998643


Q ss_pred             CCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      .. .........||+.|+|||++.+..++.++|||||||+||||+| |+.|+......+   +....    ..+      
T Consensus       160 ~~-~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~---~~~~i----~~~------  225 (273)
T d1mp8a_         160 DS-TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIGRI----ENG------  225 (273)
T ss_dssp             ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHH----HTT------
T ss_pred             CC-cceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHH---HHHHH----HcC------
Confidence            32 2223345668999999999999999999999999999999998 777776554322   11111    111      


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                         .....++.+++.+.+|+.+||+.||++|||++||+++|+.+++.
T Consensus       226 ---~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  269 (273)
T d1mp8a_         226 ---ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  269 (273)
T ss_dssp             ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ---CCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence               11134456677899999999999999999999999999988754

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-47  Score=398.13  Aligned_cols=251  Identities=27%  Similarity=0.413  Sum_probs=200.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc-CCcEEEEEEec
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE-QNEMILVYEYM  591 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~-~~~~~lV~Ey~  591 (851)
                      ++|+..+.||+|+||.||+|+++ ++.||||+++...  ..+.|.+|++++++++||||++++|+|.+ ++.++|||||+
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~   83 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   83 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             HHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence            56788899999999999999985 5679999986543  34779999999999999999999999854 56789999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCccc
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHTH  671 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~  671 (851)
                      ++|+|.++|+......++|..+++++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....     
T Consensus        84 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~-----  155 (262)
T d1byga_          84 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS-----  155 (262)
T ss_dssp             TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred             CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhcccccc---CceeccccchHhheecCCCCEeecccccceecCC-----
Confidence            99999999976544568999999999999999999996   8999999999999999999999999999986332     


Q ss_pred             cccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCCC
Q 047215          672 VSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLKG  750 (851)
Q Consensus       672 ~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  750 (851)
                      ......+|..|+|||++.+..++.++|||||||++|||+| |+.|+......   .+..+.             ....+.
T Consensus       156 ~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~---~~~~~i-------------~~~~~~  219 (262)
T d1byga_         156 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPRV-------------EKGYKM  219 (262)
T ss_dssp             ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---GHHHHH-------------TTTCCC
T ss_pred             CCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH---HHHHHH-------------HcCCCC
Confidence            1233468899999999999999999999999999999998 56665443222   222221             111223


Q ss_pred             CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          751 NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       751 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      +++..+++.+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus       220 ~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         220 DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence            4455666789999999999999999999999999988753

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-46  Score=402.79  Aligned_cols=259  Identities=30%  Similarity=0.463  Sum_probs=206.6

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCc-c--eeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccCCcEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDC-T--LAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~-~--~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      ++|+..++||+|+||+||+|++.+. .  .||||++... .....++|.+|+++|+++ +|||||+++|+|..++.+++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            6788889999999999999987543 2  4678887544 444567899999999999 799999999999999999999


Q ss_pred             EEecCCcchhhhccCC--------------CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeE
Q 047215          588 YEYMANGTLRSHLFGS--------------DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA  653 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~  653 (851)
                      |||+++|+|.++|+..              ....+++.++.+++.|||+||.|||+   ++|+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~---~~iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhc---CCccccccccceEEEcCCCce
Confidence            9999999999999654              24579999999999999999999996   899999999999999999999


Q ss_pred             EEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHH
Q 047215          654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMK  733 (851)
Q Consensus       654 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~  733 (851)
                      ||+|||+++....   ........||..|+|||.+....++.++|||||||++|||++|..|+.......  .+.+   .
T Consensus       167 kl~DfG~a~~~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~--~~~~---~  238 (309)
T d1fvra_         167 KIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYE---K  238 (309)
T ss_dssp             EECCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHH---H
T ss_pred             EEccccccccccc---cccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHH--HHHH---H
Confidence            9999999986332   112234568999999999999999999999999999999999876433222211  1111   1


Q ss_pred             HhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhh
Q 047215          734 WQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLH  792 (851)
Q Consensus       734 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  792 (851)
                       ...         ..+...+..+++.+.+|+.+||+.||++||||+||+++|+.+++..
T Consensus       239 -i~~---------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~  287 (309)
T d1fvra_         239 -LPQ---------GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  287 (309)
T ss_dssp             -GGG---------TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             -HHh---------cCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence             111         1122344566778999999999999999999999999999887533

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-45  Score=398.25  Aligned_cols=264  Identities=25%  Similarity=0.404  Sum_probs=215.8

Q ss_pred             HHhcCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEccC
Q 047215          510 VATNNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDEQ  581 (851)
Q Consensus       510 ~~t~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~  581 (851)
                      ...++|+..++||+|+||.||+|++.      .++.||||++... .......|.+|+.+++++ +|||||+++|+|..+
T Consensus        20 ~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~   99 (311)
T d1t46a_          20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG   99 (311)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             CCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeC
Confidence            34578888999999999999999863      3468999998765 344566799999999999 699999999999999


Q ss_pred             CcEEEEEEecCCcchhhhccCCC----------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCe
Q 047215          582 NEMILVYEYMANGTLRSHLFGSD----------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNI  645 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~~----------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NI  645 (851)
                      +..+||||||++|+|.++|+...                ...+++.++.+++.||++||+|||+   +++|||||||+||
T Consensus       100 ~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~---~~ivHrDLKp~NI  176 (311)
T d1t46a_         100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNI  176 (311)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGE
T ss_pred             CEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccccccc
Confidence            99999999999999999986432                2368999999999999999999995   8999999999999


Q ss_pred             EEcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchh
Q 047215          646 LLDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI  725 (851)
Q Consensus       646 Lld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~  725 (851)
                      |++.++.+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||+|++.|+.........
T Consensus       177 l~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~  256 (311)
T d1t46a_         177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK  256 (311)
T ss_dssp             EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred             cccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH
Confidence            99999999999999998765544444455678999999999999999999999999999999999965554433322111


Q ss_pred             cHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          726 NLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       726 ~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                       +.    ..         +....+...+..++..+.+|+.+||+.||++|||++|+++.|+.++.
T Consensus       257 -~~----~~---------i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~  307 (311)
T d1t46a_         257 -FY----KM---------IKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS  307 (311)
T ss_dssp             -HH----HH---------HHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -HH----HH---------HhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence             11    11         11112223334556779999999999999999999999999987654

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-45  Score=395.92  Aligned_cols=254  Identities=27%  Similarity=0.447  Sum_probs=204.9

Q ss_pred             eeeeeeecceEEEEEEEcCc----ceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc-CCcEEEEEEec
Q 047215          518 SLMIGVGGFGKVFKGEIEDC----TLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE-QNEMILVYEYM  591 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~~----~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~-~~~~~lV~Ey~  591 (851)
                      .++||+|+||+||+|++.+.    ..||||++... +....++|.+|+++|++++|||||+++|+|.. ++..++|||||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            56899999999999987442    25889988753 55667889999999999999999999999864 56899999999


Q ss_pred             CCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc-
Q 047215          592 ANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT-  670 (851)
Q Consensus       592 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~-  670 (851)
                      ++|+|.+++.... ..+++.++++++.|+|+||.|||+   .+|+||||||+||||++++.+||+|||+++........ 
T Consensus       112 ~~g~l~~~~~~~~-~~~~~~~~~~i~~qia~gL~~lH~---~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~  187 (311)
T d1r0pa_         112 KHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS  187 (311)
T ss_dssp             TTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCC
T ss_pred             ecCchhhhhcccc-ccchHHHHHHHHHHHHHhhhhhcc---cCcccCCccHHhEeECCCCCEEEecccchhhcccccccc
Confidence            9999999886543 457888999999999999999995   89999999999999999999999999999865432221 


Q ss_pred             -ccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccCC
Q 047215          671 -HVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHLK  749 (851)
Q Consensus       671 -~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  749 (851)
                       .......||+.|+|||.+....++.++||||||++||||+||+.|+.......  ....+.   . .+.         +
T Consensus       188 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~--~~~~~i---~-~g~---------~  252 (311)
T d1r0pa_         188 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYL---L-QGR---------R  252 (311)
T ss_dssp             TTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC--------CHHHH---H-TTC---------C
T ss_pred             ceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHH--HHHHHH---H-cCC---------C
Confidence             22334568999999999999999999999999999999999888876543221  111111   1 110         1


Q ss_pred             CCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          750 GNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       750 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ...+..+++.+.+|+.+||+.||++||||.||+++|+.+++
T Consensus       253 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~  293 (311)
T d1r0pa_         253 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  293 (311)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            12334556779999999999999999999999999998864

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-45  Score=397.64  Aligned_cols=262  Identities=25%  Similarity=0.452  Sum_probs=210.2

Q ss_pred             HhcCCceeeeeeeecceEEEEEEEcC--------cceeEEeecCCC-ChhhHHHHHHHHHHHHhc-CCcceeeEEEEEcc
Q 047215          511 ATNNFDESLMIGVGGFGKVFKGEIED--------CTLAAIKRANPQ-SEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDE  580 (851)
Q Consensus       511 ~t~~f~~~~~LG~G~fG~Vykg~~~~--------~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~  580 (851)
                      ..++|+..+.||+|+||.||+|+...        +..||||++... ......++.+|...+.++ +|||||+++++|.+
T Consensus        11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~   90 (299)
T d1fgka_          11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ   90 (299)
T ss_dssp             CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence            34688889999999999999998532        347899998765 345567899999999998 89999999999999


Q ss_pred             CCcEEEEEEecCCcchhhhccCCC--------------CCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeE
Q 047215          581 QNEMILVYEYMANGTLRSHLFGSD--------------LPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNIL  646 (851)
Q Consensus       581 ~~~~~lV~Ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NIL  646 (851)
                      ++..++||||+++|+|.++|....              ...+++.++++++.|++.||+|||+   ++||||||||+|||
T Consensus        91 ~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~---~~ivHrDiKp~NiL  167 (299)
T d1fgka_          91 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVL  167 (299)
T ss_dssp             SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred             CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhh---CCEEeeeeccccee
Confidence            999999999999999999996543              2468999999999999999999995   99999999999999


Q ss_pred             EcCCCeEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchh
Q 047215          647 LDENFVAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQI  725 (851)
Q Consensus       647 ld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~  725 (851)
                      ++.++.+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||++ |+.||......   
T Consensus       168 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~---  244 (299)
T d1fgka_         168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---  244 (299)
T ss_dssp             ECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---
T ss_pred             ecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH---
Confidence            99999999999999986544333334455678999999999999999999999999999999998 56666543221   


Q ss_pred             cHHHHHHHHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          726 NLADWAMKWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       726 ~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      .+.    .....         ......+..+++.+.+|+.+||+.||.+|||+.||++.|+.+..+
T Consensus       245 ~~~----~~i~~---------~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a~  297 (299)
T d1fgka_         245 ELF----KLLKE---------GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  297 (299)
T ss_dssp             HHH----HHHHT---------TCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHH----HHHHc---------CCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhhc
Confidence            111    11111         112233445567799999999999999999999999999988754

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.1e-45  Score=400.40  Aligned_cols=251  Identities=23%  Similarity=0.357  Sum_probs=210.1

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|++.+.||+|+||+||+|+. .+++.+|||++...   .....+.+.+|+.+|++++|||||++++++..++.+++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            5689999999999999999997 45789999998643   2334577899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      |||++|+|..++....  .+++.++..++.|++.||+|||+   ++||||||||+||||+.++.+||+|||+|+..... 
T Consensus        84 E~~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~-  157 (316)
T d1fota_          84 DYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-  157 (316)
T ss_dssp             CCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred             eecCCccccccccccc--cccccHHHHHHHHHHHhhhhhcc---CcEEccccCchheeEcCCCCEEEecCccceEeccc-
Confidence            9999999999885543  57888889999999999999994   89999999999999999999999999999874332 


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                          ....+||+.|||||++.+..++.++|||||||+||||++|+.||......+.      ..... .+        . 
T Consensus       158 ----~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~------~~~i~-~~--------~-  217 (316)
T d1fota_         158 ----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT------YEKIL-NA--------E-  217 (316)
T ss_dssp             ----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHH-HC--------C-
T ss_pred             ----cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH------HHHHH-cC--------C-
Confidence                2356899999999999999999999999999999999999999976432211      11111 11        1 


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHHHhhhhhcccC
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~L~~~~~~~~~w~~~~  799 (851)
                       ..+++..++.+.+++.+||+.||.+||     |++++++|         +|++.-
T Consensus       218 -~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H---------p~f~~i  263 (316)
T d1fota_         218 -LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH---------PWFKEV  263 (316)
T ss_dssp             -CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS---------GGGSSC
T ss_pred             -CCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC---------cccccC
Confidence             123344556789999999999999996     99999999         887653

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-45  Score=401.94  Aligned_cols=248  Identities=26%  Similarity=0.340  Sum_probs=208.3

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+|+. .+++.+|||++...   .....+.+.+|+.+|++++||||+++++++.+++.+++||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            5799999999999999999986 46789999998643   2334577899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      |||++|+|.+++...  ..+++.++..++.|++.||+|||+   ++||||||||+|||++.++.+||+|||+|+......
T Consensus        85 ey~~gg~L~~~~~~~--~~~~e~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~  159 (337)
T d1o6la_          85 EYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG  159 (337)
T ss_dssp             ECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred             eccCCCchhhhhhcc--cCCcHHHHHHHHHHHhhhhhhhhh---cCccccccCHHHeEecCCCCEEEeecccccccccCC
Confidence            999999999998654  358889999999999999999996   899999999999999999999999999998643322


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                        ......+||+.|+|||++.+..|+.++||||+||+||||++|+.||......+   +.   ... ..+      .   
T Consensus       160 --~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~---~~---~~i-~~~------~---  221 (337)
T d1o6la_         160 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER---LF---ELI-LME------E---  221 (337)
T ss_dssp             --CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH---HHH-HHC------C---
T ss_pred             --cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHH---HH---HHH-hcC------C---
Confidence              23345789999999999999999999999999999999999999997653221   11   111 111      1   


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPT-----MGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  784 (851)
                       ..++...++.+++|+.+||+.||.+||+     ++|+++|
T Consensus       222 -~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         222 -IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             -CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             -CCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence             1233445567899999999999999994     8999999

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-46  Score=393.35  Aligned_cols=256  Identities=23%  Similarity=0.334  Sum_probs=198.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEcC--c--ceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIED--C--TLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~--~--~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      ++|+..+.||+|+||+||+|++..  +  ..||||++...   .....++|.+|+.+|++++|||||+++|+|.+ ...+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            568899999999999999998643  2  36899988654   34456789999999999999999999999976 4678


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      +||||+++|+|.+++.... .++++.++++++.|+|+||.|||+   ++|+||||||+||||+.++.+||+|||+++...
T Consensus        87 lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~  162 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALP  162 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred             eeeeeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhh---CCEeeeeecHHHhccccccceeeccchhhhhcc
Confidence            9999999999998875433 468999999999999999999996   899999999999999999999999999998754


Q ss_pred             CCCc-cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHh-CCcCCCCCCCcchhcHHHHHHHHhhhcccccc
Q 047215          666 SMEH-THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVC-ARAVINPTLPKDQINLADWAMKWQKQRSLKSI  743 (851)
Q Consensus       666 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLlt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i  743 (851)
                      .... ........||..|+|||.+.+..++.++|||||||++|||+| |+.||......+   ..   ...         
T Consensus       163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~---~~---~~i---------  227 (273)
T d1u46a_         163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ---IL---HKI---------  227 (273)
T ss_dssp             C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HH---HHH---------
T ss_pred             cCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHH---HH---HHH---------
Confidence            3322 223344568889999999999999999999999999999998 888886543221   11   111         


Q ss_pred             cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          744 IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       744 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      .........+..++..+.+|+.+||+.||++|||+.||++.|.++
T Consensus       228 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         228 DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             HTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            111122233455667799999999999999999999998887653

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=5.7e-45  Score=387.35  Aligned_cols=256  Identities=21%  Similarity=0.279  Sum_probs=209.8

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCCh---------hhHHHHHHHHHHHHhcC-CcceeeEEEEEccC
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSE---------QGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQ  581 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~---------~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~  581 (851)
                      ++|+..++||+|+||+||+|+. .+++.+|||++.....         ...+.+.+|+.+|++++ |||||++++++.++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            6899999999999999999986 5678999998765421         12346889999999997 99999999999999


Q ss_pred             CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccc
Q 047215          582 NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla  661 (851)
                      +..|||||||++|+|.++|...  .++++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||++
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a  157 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS  157 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             cceEEEEEcCCCchHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---cCCcccccccceEEEcCCCCeEEccchhe
Confidence            9999999999999999999653  469999999999999999999995   89999999999999999999999999999


Q ss_pred             ccCCCCCccccccccccCCcccCcccccc------cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHh
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWR------QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQ  735 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~  735 (851)
                      +.....   .......||+.|+|||++.+      ..++.++||||+||+||||++|+.||....+.+.       ....
T Consensus       158 ~~~~~~---~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~-------~~~i  227 (277)
T d1phka_         158 CQLDPG---EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM-------LRMI  227 (277)
T ss_dssp             EECCTT---CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------HHHH
T ss_pred             eEccCC---CceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHH-------HHHH
Confidence            864332   22345679999999999863      3578899999999999999999999976532211       1111


Q ss_pred             hhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          736 KQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       736 ~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      ..+..      ..........++.+++|+.+||+.||++|||++|+++|         +|+++
T Consensus       228 ~~~~~------~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h---------~~~~~  275 (277)
T d1phka_         228 MSGNY------QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH---------PFFQQ  275 (277)
T ss_dssp             HHTCC------CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS---------GGGCT
T ss_pred             HhCCC------CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC---------HHHHH
Confidence            11111      11122234566779999999999999999999999999         89864

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-45  Score=398.98  Aligned_cols=261  Identities=24%  Similarity=0.352  Sum_probs=212.5

Q ss_pred             HHHhcCCceeeeeeeecceEEEEEEEc------CcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccC
Q 047215          509 RVATNNFDESLMIGVGGFGKVFKGEIE------DCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQ  581 (851)
Q Consensus       509 ~~~t~~f~~~~~LG~G~fG~Vykg~~~------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~  581 (851)
                      +...++|+..+.||+|+||+||+|++.      +++.||||++... .......|.+|+.++++++|||||+++|+|..+
T Consensus        16 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~   95 (308)
T d1p4oa_          16 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG   95 (308)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred             eecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecC
Confidence            334578889999999999999999864      3468999998754 445556799999999999999999999999999


Q ss_pred             CcEEEEEEecCCcchhhhccCC--------CCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeE
Q 047215          582 NEMILVYEYMANGTLRSHLFGS--------DLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVA  653 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~--------~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~  653 (851)
                      +..++|||||++|+|.+++...        ....+++.++.+++.|+|+||.|||+   ++|+||||||+|||++.++.+
T Consensus        96 ~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~---~~ivHrDlk~~NiLld~~~~~  172 (308)
T d1p4oa_          96 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTV  172 (308)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCE
T ss_pred             CceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeeceEcCCceeecCCceE
Confidence            9999999999999999988532        23457899999999999999999995   899999999999999999999


Q ss_pred             EEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCc-CCCCCCCcchhcHHHHHH
Q 047215          654 KMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARA-VINPTLPKDQINLADWAM  732 (851)
Q Consensus       654 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~-p~~~~~~~~~~~l~~~~~  732 (851)
                      ||+|||+++...............||+.|+|||.+.+..++.++||||||+++|||+||+. |+... ..     .++..
T Consensus       173 Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~-~~-----~~~~~  246 (308)
T d1p4oa_         173 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-SN-----EQVLR  246 (308)
T ss_dssp             EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CH-----HHHHH
T ss_pred             EEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCC-CH-----HHHHH
Confidence            9999999986544333334455678999999999999999999999999999999999964 44332 21     11111


Q ss_pred             HHhhhcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 047215          733 KWQKQRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYV  788 (851)
Q Consensus       733 ~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  788 (851)
                      ...         +.. ....+..++..+.+++.+||+.+|++|||++||+++|+..
T Consensus       247 ~i~---------~~~-~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~  292 (308)
T d1p4oa_         247 FVM---------EGG-LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  292 (308)
T ss_dssp             HHH---------TTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             HHH---------hCC-CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            111         111 1223445667899999999999999999999999997643

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-44  Score=388.61  Aligned_cols=264  Identities=22%  Similarity=0.241  Sum_probs=201.3

Q ss_pred             eeeeeeeecceEEEEEEEc-CcceeEEeecCCCChh-----hHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          517 ESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQ-----GLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       517 ~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~-----~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ..++||+|+||+||+|+.. +++.||||++......     ..+.+.+|+.+|++++|||||++++++..++..+|||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            3578999999999999964 5789999998654221     134688999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      ++++++..++..  ...+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++......  
T Consensus        82 ~~~~~~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~--  154 (299)
T d1ua2a_          82 METDLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN--  154 (299)
T ss_dssp             CSEEHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC--
T ss_pred             hcchHHhhhhhc--ccCCCHHHHHHHHHHHHHHHHHhhc---cceecccCCcceEEecCCCccccccCccccccCCCc--
Confidence            999888777633  3468899999999999999999995   999999999999999999999999999997643322  


Q ss_pred             ccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccC----
Q 047215          671 HVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIID----  745 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d----  745 (851)
                      .......||+.|+|||++.. ..++.++|||||||++|||++|+.||......+....   ..............+    
T Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~---i~~~~~~~~~~~~~~~~~~  231 (299)
T d1ua2a_         155 RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTR---IFETLGTPTEEQWPDMCSL  231 (299)
T ss_dssp             CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---HHHHHCCCCTTTSSSTTSS
T ss_pred             ccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHH---HHHhcCCCChhhccchhcc
Confidence            22334579999999999865 4689999999999999999999999876543322111   111100000000000    


Q ss_pred             --cc-C--CCCC-----ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          746 --PH-L--KGNY-----SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       746 --~~-l--~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                        .. .  ....     ....++.+.+|+.+||+.||++|||++|+|+|         +|+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H---------p~f~~~  286 (299)
T d1ua2a_         232 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM---------KYFSNR  286 (299)
T ss_dssp             TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS---------GGGTSS
T ss_pred             chhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC---------HhhCCC
Confidence              00 0  0000     12345679999999999999999999999999         998753

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.1e-45  Score=400.67  Aligned_cols=251  Identities=21%  Similarity=0.307  Sum_probs=210.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~  588 (851)
                      ++|+..+.||+|+||.||+|+.. +++.+|||++...   .....+.+.+|+++|++++|||||++++++......++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            57999999999999999999874 6889999987642   2234567899999999999999999999999999999999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~  668 (851)
                      ||+.+|+|.+++...  ..+++.++..++.||+.||.|||+   ++||||||||+||||+.++.+||+|||+++..... 
T Consensus       121 e~~~~g~l~~~l~~~--~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~-  194 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-  194 (350)
T ss_dssp             ECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred             ccccccchhhhHhhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCcCCHHHcccCCCCCEEeeeceeeeecccc-
Confidence            999999999998554  368999999999999999999995   89999999999999999999999999999874322 


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                          .....||+.|||||++.+..++.++|||||||+||||+||+.||....+..   +   ..... .+        . 
T Consensus       195 ----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~---~---~~~i~-~~--------~-  254 (350)
T d1rdqe_         195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ---I---YEKIV-SG--------K-  254 (350)
T ss_dssp             ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---H---HHHHH-HC--------C-
T ss_pred             ----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHH---H---HHHHh-cC--------C-
Confidence                234679999999999999999999999999999999999999997543211   1   11111 11        0 


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHHHhhhhhcccC
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~L~~~~~~~~~w~~~~  799 (851)
                       ...+...++.+.+++.+||+.||.+|+     |++++++|         +|++..
T Consensus       255 -~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H---------p~f~~~  300 (350)
T d1rdqe_         255 -VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH---------KWFATT  300 (350)
T ss_dssp             -CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS---------GGGTTC
T ss_pred             -CCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcC---------ccccCC
Confidence             122344556789999999999999994     99999999         887643

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-45  Score=395.73  Aligned_cols=269  Identities=24%  Similarity=0.320  Sum_probs=200.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC----cEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN----EMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~----~~~lV~  588 (851)
                      .+|...+.||+|+||.||+|+++ ++.||||++...... ...+..|+..+.+++|||||+++|+|...+    .++|||
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~-g~~vAvK~~~~~~~~-~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~   80 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccchh-HHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence            45677889999999999999974 678999998643221 222344555566789999999999996543    689999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcC-----CCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG-----AERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~-----~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      |||++|+|.++|+..   .++|.++++++.|+|.||+|||+.     .+++||||||||+||||+.++.+||+|||+++.
T Consensus        81 Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~  157 (303)
T d1vjya_          81 DYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  157 (303)
T ss_dssp             ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             ecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcccc
Confidence            999999999999654   589999999999999999999963     146999999999999999999999999999986


Q ss_pred             CCCCCcc--ccccccccCCcccCccccccc------CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcc----h-----hc
Q 047215          664 GPSMEHT--HVSTAVKGSFGYLDPEYFWRQ------QLTEKSDVYSFGVVLFEVVCARAVINPTLPKD----Q-----IN  726 (851)
Q Consensus       664 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~----~-----~~  726 (851)
                      .......  .......||+.|+|||++...      .++.++|||||||+||||+||+.|+.......    .     ..
T Consensus       158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~  237 (303)
T d1vjya_         158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS  237 (303)
T ss_dssp             EETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             ccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccch
Confidence            4332221  123456799999999998754      26789999999999999999988764322111    1     11


Q ss_pred             HHHHHHHHhhhcccccccCccCCCC-CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q 047215          727 LADWAMKWQKQRSLKSIIDPHLKGN-YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQL  791 (851)
Q Consensus       727 l~~~~~~~~~~~~~~~i~d~~l~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  791 (851)
                      .. ......    ......|.+... .+.+++..+.+|+.+||+.||++|||+.||+++|+.+.+.
T Consensus       238 ~~-~~~~~~----~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  298 (303)
T d1vjya_         238 VE-EMRKVV----CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HH-HHHHHH----TTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HH-HHHHHH----hccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence            11 111111    111122222111 1235667799999999999999999999999999877643

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-44  Score=394.56  Aligned_cols=250  Identities=21%  Similarity=0.296  Sum_probs=200.8

Q ss_pred             cCCceee-eeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhc-CCcceeeEEEEEcc----CCcEE
Q 047215          513 NNFDESL-MIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKL-RHRHLVSLIGFCDE----QNEMI  585 (851)
Q Consensus       513 ~~f~~~~-~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~----~~~~~  585 (851)
                      ++|.+.+ +||+|+||.||+|+. .+++.||||++...     ..+.+|+.++.++ +|||||+++++++.    +..+|
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            5788764 699999999999986 56789999998642     4567899987655 89999999999854    56789


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC---CCeEEEeeccccc
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE---NFVAKMSDFGLSK  662 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~---~~~~kl~DFGla~  662 (851)
                      ||||||++|+|.++|.......+++.++..++.|++.||+|||+   .+|+||||||+|||++.   ++.+||+|||+++
T Consensus        86 ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~---~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~  162 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK  162 (335)
T ss_dssp             EEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             EEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHH---cCCccccccccccccccccccccccccccceee
Confidence            99999999999999977655679999999999999999999995   99999999999999975   5679999999998


Q ss_pred             cCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      ......   ......||+.|+|||++.+..|+.++|||||||+||||+||+.||...........           ....
T Consensus       163 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~-----------~~~~  228 (335)
T d2ozaa1         163 ETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-----------MKTR  228 (335)
T ss_dssp             ECCCCC---CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-------------------C
T ss_pred             eccCCC---ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHH-----------HHHH
Confidence            644322   23456799999999999999999999999999999999999999975433221100           0011


Q ss_pred             ccCccC--CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          743 IIDPHL--KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       743 i~d~~l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                      +.....  ........++.+.+|+.+||+.||++|||+.|+++|
T Consensus       229 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         229 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             CCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            111111  111113456789999999999999999999999999

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2e-44  Score=398.02  Aligned_cols=249  Identities=22%  Similarity=0.309  Sum_probs=201.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCC---hhhHHHHH---HHHHHHHhcCCcceeeEEEEEccCCcEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQS---EQGLAEFE---TEIEMLSKLRHRHLVSLIGFCDEQNEMI  585 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~---~~~~~~~~---~Ei~~l~~l~HpnIv~l~g~~~~~~~~~  585 (851)
                      ++|++.++||+|+||.||+|+.. +++.+|||++....   ......+.   .|+++++.++|||||++++++..++.++
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            67999999999999999999975 57899999875321   11222333   4467777788999999999999999999


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      ||||||++|+|.++|...  ..+++.++..++.||+.||+|||+   ++||||||||+|||++.++.+||+|||+|+...
T Consensus        84 ivmE~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~ylH~---~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~  158 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFS  158 (364)
T ss_dssp             EEECCCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSSSCEEECCCTTCEECS
T ss_pred             EEEEecCCCcHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHH---CCccceeeccceeEEcCCCcEEEeeeceeeecC
Confidence            999999999999999554  457899999999999999999995   999999999999999999999999999998643


Q ss_pred             CCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccccc
Q 047215          666 SMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSII  744 (851)
Q Consensus       666 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~  744 (851)
                      ..    ......||+.|+|||++.. ..++.++|||||||+||||+||+.||......+...+.    .        .+.
T Consensus       159 ~~----~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~----~--------~~~  222 (364)
T d1omwa3         159 KK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID----R--------MTL  222 (364)
T ss_dssp             SS----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHH----H--------HSS
T ss_pred             CC----cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHH----H--------hcc
Confidence            22    2344679999999999974 57999999999999999999999999765443321111    0        011


Q ss_pred             CccCCCCCChhHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 047215          745 DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPT-----MGEVLWH  784 (851)
Q Consensus       745 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  784 (851)
                      .  ....++...++.+.+|+.+||+.||.+|||     ++|+++|
T Consensus       223 ~--~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         223 T--MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             S--CCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             c--CCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence            1  111223345567899999999999999999     7999999

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.7e-44  Score=383.03  Aligned_cols=259  Identities=25%  Similarity=0.368  Sum_probs=201.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC---ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC----c
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ---SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN----E  583 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~----~  583 (851)
                      .++|++.+.||+|+||+||+|+. .+++.+|||++...   .......|.+|+++|++++|||||++++++...+    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            36799999999999999999986 56889999998654   3344567999999999999999999999986543    4


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .+|||||+++|+|.+++...  .++++.++..++.|++.||+|||+   ++||||||||+|||++.++..+|+|||+++.
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~--~~l~~~~~~~i~~qi~~al~~lH~---~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~  160 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARA  160 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTSCEEECCCTTCEE
T ss_pred             EEEEEECCCCCEehhhhccc--CCCCHHHHHHHHHHHHHHHHHHHh---CCccCccccCcccccCccccceeehhhhhhh
Confidence            89999999999999988544  468999999999999999999995   8999999999999999999999999999875


Q ss_pred             CCCC-CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          664 GPSM-EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       664 ~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      .... ..........||+.|+|||++.+..++.++|||||||+||||+||+.||....+.+      .........    
T Consensus       161 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~~~~~~~~----  230 (277)
T d1o6ya_         161 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS------VAYQHVRED----  230 (277)
T ss_dssp             CC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCC----
T ss_pred             hccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHH------HHHHHHhcC----
Confidence            4322 22223445679999999999999999999999999999999999999997543221      111111111    


Q ss_pred             ccCccCCCCCChhHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHH
Q 047215          743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRP-TMGEVLWHLEYV  788 (851)
Q Consensus       743 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~evl~~L~~~  788 (851)
                         +.......+..++.+.+++.+||+.||.+|| |++++++.|..+
T Consensus       231 ---~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~  274 (277)
T d1o6ya_         231 ---PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  274 (277)
T ss_dssp             ---CCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             ---CCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHH
Confidence               1111112234556799999999999999999 899988877655

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-44  Score=389.45  Aligned_cols=252  Identities=17%  Similarity=0.238  Sum_probs=206.2

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      .++|++.+.||+|+||+||+|... +++.+|||.+.....+ ...+.+|+++|++++|||||++++++.+++.+||||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~-~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHH-HHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCccc-HHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            367999999999999999999875 5788999998765433 45688999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC--CCeEEEeeccccccCCCCC
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE--NFVAKMSDFGLSKTGPSME  668 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~--~~~~kl~DFGla~~~~~~~  668 (851)
                      |++|+|.++|.... .++++.++..++.||+.||+|||+   ++|+||||||+|||++.  ...+||+|||+++..... 
T Consensus        83 ~~gg~L~~~i~~~~-~~l~e~~~~~i~~qi~~al~yLH~---~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~-  157 (321)
T d1tkia_          83 ISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-  157 (321)
T ss_dssp             CCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-
T ss_pred             CCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---cCCCcccccccceeecCCCceEEEEcccchhhccccC-
Confidence            99999999996543 368999999999999999999995   89999999999999974  458999999999864332 


Q ss_pred             ccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCccC
Q 047215          669 HTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPHL  748 (851)
Q Consensus       669 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  748 (851)
                        .......||+.|+|||.+.+..++.++||||+||++|||++|+.||......+.      ........ .  .++.. 
T Consensus       158 --~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~------~~~i~~~~-~--~~~~~-  225 (321)
T d1tkia_         158 --DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI------IENIMNAE-Y--TFDEE-  225 (321)
T ss_dssp             --CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHHTC-C--CCCHH-
T ss_pred             --CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhCC-C--CCChh-
Confidence              223456789999999999999999999999999999999999999976533211      11111100 0  00000 


Q ss_pred             CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047215          749 KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWH  784 (851)
Q Consensus       749 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  784 (851)
                         .....+..+++|+.+||+.||.+|||++|+++|
T Consensus       226 ---~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         226 ---AFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             ---HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ---hccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence               011345668999999999999999999999999

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-44  Score=392.55  Aligned_cols=248  Identities=25%  Similarity=0.378  Sum_probs=204.3

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC---ChhhHHHHHHHHHHHH-hcCCcceeeEEEEEccCCcEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ---SEQGLAEFETEIEMLS-KLRHRHLVSLIGFCDEQNEMILV  587 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~-~l~HpnIv~l~g~~~~~~~~~lV  587 (851)
                      ++|+..+.||+|+||+||+|+.. +++.+|||++...   .....+.+..|..++. .++|||||++++++.+++..|||
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            57899999999999999999875 5788999998643   2233456677777665 68999999999999999999999


Q ss_pred             EEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCC
Q 047215          588 YEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       588 ~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~  667 (851)
                      ||||++|+|.+++...  ..+++.++..++.||+.||+|||+   ++|+||||||+|||+++++.+||+|||+++.....
T Consensus        82 mEy~~~g~L~~~i~~~--~~~~e~~~~~~~~qi~~al~ylH~---~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~  156 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG  156 (320)
T ss_dssp             EECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EeecCCCcHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCcccceeecCCCceeccccchhhhcccc
Confidence            9999999999999643  358889999999999999999996   89999999999999999999999999999864332


Q ss_pred             CccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccccccCcc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKSIIDPH  747 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  747 (851)
                        ........||+.|+|||++.+..++.++|||||||++|||++|+.||....+.+.   .   ... ..+      .+ 
T Consensus       157 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~---~---~~i-~~~------~~-  220 (320)
T d1xjda_         157 --DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL---F---HSI-RMD------NP-  220 (320)
T ss_dssp             --TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---H---HHH-HHC------CC-
T ss_pred             --cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHH---H---HHH-HcC------CC-
Confidence              2223456799999999999999999999999999999999999999976533211   1   111 111      11 


Q ss_pred             CCCCCChhHHHHHHHHHHHhcccCCCCCCCHH-HHHHH
Q 047215          748 LKGNYSPESLEKFGEIAEKCLDDEGKNRPTMG-EVLWH  784 (851)
Q Consensus       748 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~-evl~~  784 (851)
                         .++..++..+.+|+.+||+.||.+|||+. |+++|
T Consensus       221 ---~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~h  255 (320)
T d1xjda_         221 ---FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH  255 (320)
T ss_dssp             ---CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred             ---CCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhC
Confidence               23344556799999999999999999995 89888

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5.6e-44  Score=382.45  Aligned_cols=269  Identities=20%  Similarity=0.264  Sum_probs=207.0

Q ss_pred             cCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~Ey  590 (851)
                      ++|+..++||+|+||+||+|+..+++.||||++....  ....+.+.+|+.+|++++|||||++++++..++..++++||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            5789999999999999999999889999999986543  33357899999999999999999999999999999999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCcc
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEHT  670 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~  670 (851)
                      +.++.+..+...  ...+++.++..++.|++.||+|||+   .+||||||||+|||++.++.+||+|||++.......  
T Consensus        82 ~~~~~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~---~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~--  154 (286)
T d1ob3a_          82 LDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--  154 (286)
T ss_dssp             CSEEHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred             ehhhhHHHHHhh--cCCcchhhhHHHHHHHHHHHHHhcc---CcEEecCCCCceeeEcCCCCEEecccccceecccCc--
Confidence            998887777643  3569999999999999999999995   899999999999999999999999999997633221  


Q ss_pred             ccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc---ccc---
Q 047215          671 HVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL---KSI---  743 (851)
Q Consensus       671 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~---~~i---  743 (851)
                      .......|++.|+|||.+.+ ..++.++|||||||++|||++|+.||......+.................   ...   
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  234 (286)
T d1ob3a_         155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY  234 (286)
T ss_dssp             -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred             cccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhc
Confidence            12334468999999999875 45799999999999999999999999765432221111000000000000   000   


Q ss_pred             ------cCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcc
Q 047215          744 ------IDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMR  797 (851)
Q Consensus       744 ------~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~  797 (851)
                            ..+..........++.+.+|+.+||+.||++|||++|+++|         +|++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H---------p~f~  285 (286)
T d1ob3a_         235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH---------AYFK  285 (286)
T ss_dssp             CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS---------GGGG
T ss_pred             ccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC---------cccC
Confidence                  00000111223445678999999999999999999999999         8876

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-44  Score=383.69  Aligned_cols=269  Identities=22%  Similarity=0.332  Sum_probs=205.4

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCC--hhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQS--EQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ++|+..+.||+|+||+||+|+. .+++.||||++....  ....+.+.+|+++|++++|||||++++++..++..++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            5899999999999999999986 567899999986542  2345788999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      |+.++. .+++.......+++.++..++.|++.||+|||+   ++||||||||+|||++.++.+||+|||+++.....  
T Consensus        82 ~~~~~~-~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~---~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~--  155 (298)
T d1gz8a_          82 FLHQDL-KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--  155 (298)
T ss_dssp             CCSEEH-HHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCC--
T ss_pred             ecCCch-hhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhc---CCEEccccCchheeecccCcceeccCCcceeccCC--
Confidence            997654 444444445679999999999999999999995   89999999999999999999999999999764322  


Q ss_pred             cccccccccCCcccCcccccccC-CCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhh--ccccccc-C
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQ--RSLKSII-D  745 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~-~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~--~~~~~i~-d  745 (851)
                      ........||+.|+|||.+.... ++.++|||||||++|||++|+.||......+...  .........  .....+. .
T Consensus       156 ~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~  233 (298)
T d1gz8a_         156 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF--RIFRTLGTPDEVVWPGVTSM  233 (298)
T ss_dssp             SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCCCCTTTSTTGGGS
T ss_pred             cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHH--HHHHhcCCCchhhccccccc
Confidence            22334557999999999887655 5899999999999999999999997653322111  101100000  0000000 0


Q ss_pred             ccCCCCC-----------ChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          746 PHLKGNY-----------SPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       746 ~~l~~~~-----------~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      +......           .+..+..+.+|+.+||+.||++|||++|+++|         +|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H---------~ff~~  288 (298)
T d1gz8a_         234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH---------PFFQD  288 (298)
T ss_dssp             TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS---------GGGTT
T ss_pred             cccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC---------Hhhcc
Confidence            0000000           12334678999999999999999999999999         99864

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-44  Score=384.75  Aligned_cols=273  Identities=22%  Similarity=0.311  Sum_probs=205.1

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-C-cceeEEeecCCC--ChhhHHHHHHHHHHHHhc---CCcceeeEEEEEc-----
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-D-CTLAAIKRANPQ--SEQGLAEFETEIEMLSKL---RHRHLVSLIGFCD-----  579 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~-~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l---~HpnIv~l~g~~~-----  579 (851)
                      .++|++.++||+|+||+||+|+.. . ++.||||++...  .......+.+|+.+|+.|   +||||++++++|.     
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            378999999999999999999863 3 567899987543  222233466788777766   7999999999984     


Q ss_pred             cCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecc
Q 047215          580 EQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFG  659 (851)
Q Consensus       580 ~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFG  659 (851)
                      .....+++|||++++++...... ....+++..+..++.|++.||+|||+   ++||||||||+|||++.++.+||+|||
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~yLH~---~~ivHrDiKp~NILi~~~~~~kl~dfg  161 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFG  161 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred             cCceEEEEEEeccCCchhhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecCCCccEEEEcCCCCeeecchh
Confidence            34578999999999877654433 34568899999999999999999995   899999999999999999999999999


Q ss_pred             ccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcc
Q 047215          660 LSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS  739 (851)
Q Consensus       660 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  739 (851)
                      +++...   .........||+.|+|||++.+..++.++||||+||++|||++|+.||....+.+................
T Consensus       162 ~~~~~~---~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  238 (305)
T d1blxa_         162 LARIYS---FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED  238 (305)
T ss_dssp             SCCCCC---GGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred             hhhhhc---ccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhc
Confidence            987632   22334567899999999999999999999999999999999999999976543322111110000000000


Q ss_pred             cc------c-cc---CccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccCC
Q 047215          740 LK------S-II---DPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTDD  800 (851)
Q Consensus       740 ~~------~-i~---d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~~  800 (851)
                      ..      . ..   .+.....+....++.+.+|+.+||+.||++|||++|+|+|         +|+++-+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H---------pff~~i~  300 (305)
T d1blxa_         239 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH---------PYFQDLE  300 (305)
T ss_dssp             SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS---------GGGTTCC
T ss_pred             ccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC---------hhhcCch
Confidence            00      0 00   0000011223455678999999999999999999999999         9987543

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-44  Score=380.88  Aligned_cols=245  Identities=22%  Similarity=0.374  Sum_probs=199.9

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCCh------hhHHHHHHHHHHHHhcC--CcceeeEEEEEccCCc
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSE------QGLAEFETEIEMLSKLR--HRHLVSLIGFCDEQNE  583 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~------~~~~~~~~Ei~~l~~l~--HpnIv~l~g~~~~~~~  583 (851)
                      ++|++.++||+|+||+||+|+. .+++.||||++.....      .....+.+|+.+|++++  |||||++++++..++.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            5799999999999999999986 4678999998754211      11234678999999996  8999999999999999


Q ss_pred             EEEEEEecCC-cchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-CCeEEEeecccc
Q 047215          584 MILVYEYMAN-GTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-NFVAKMSDFGLS  661 (851)
Q Consensus       584 ~~lV~Ey~~~-gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-~~~~kl~DFGla  661 (851)
                      .++||||+.+ +++.+++...  ..+++.++..++.|++.||+|||+   ++|+||||||+|||++. ++.+||+|||++
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~--~~l~e~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NIll~~~~~~vkl~DFG~a  158 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSG  158 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEEEEEeccCcchHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCccccCcccceEEecCCCeEEECccccc
Confidence            9999999976 6777777443  468999999999999999999995   99999999999999985 579999999999


Q ss_pred             ccCCCCCccccccccccCCcccCcccccccCC-CchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccc
Q 047215          662 KTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQL-TEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSL  740 (851)
Q Consensus       662 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  740 (851)
                      +....    .......||+.|+|||++.+..+ +.++|||||||+||||++|+.||....     .       .. ..  
T Consensus       159 ~~~~~----~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-----~-------i~-~~--  219 (273)
T d1xwsa_         159 ALLKD----TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----E-------II-RG--  219 (273)
T ss_dssp             EECCS----SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----H-------HH-HC--
T ss_pred             eeccc----ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch-----H-------Hh-hc--
Confidence            86432    22345679999999999987765 577999999999999999999986421     0       00 00  


Q ss_pred             ccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          741 KSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       741 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                          ..    .++...++.+.+|+.+||+.||++|||++|+++|         +|+++
T Consensus       220 ----~~----~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h---------p~~~~  260 (273)
T d1xwsa_         220 ----QV----FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH---------PWMQD  260 (273)
T ss_dssp             ----CC----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS---------GGGSS
T ss_pred             ----cc----CCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcC---------HhhCC
Confidence                01    1223345668999999999999999999999999         99864

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-42  Score=373.13  Aligned_cols=273  Identities=21%  Similarity=0.299  Sum_probs=202.1

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc--------C
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE--------Q  581 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~--------~  581 (851)
                      ++|++.++||+|+||+||+|+. ++++.||||++...  .......+.+|+++|++++||||+++++++..        +
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            6899999999999999999996 57889999987543  33445678999999999999999999998854        3


Q ss_pred             CcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccc
Q 047215          582 NEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLS  661 (851)
Q Consensus       582 ~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla  661 (851)
                      +..++||||++++.+.....  ....+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||++
T Consensus        90 ~~~~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~---~~ivHrDlKp~NILl~~~~~~kl~dfg~~  164 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLA  164 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             ceEEEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhcc---CCEEecCcCchheeecCCCcEEeeeccee
Confidence            56899999999888776553  33468889999999999999999995   89999999999999999999999999999


Q ss_pred             ccCCCCCcc--ccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhc
Q 047215          662 KTGPSMEHT--HVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR  738 (851)
Q Consensus       662 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~  738 (851)
                      +........  .......||+.|+|||++.+. .++.++|||||||++|||++|+.||....+.................
T Consensus       165 ~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  244 (318)
T d3blha1         165 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE  244 (318)
T ss_dssp             EECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             eecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChh
Confidence            764432211  122345799999999998765 68999999999999999999999997643322211111110000000


Q ss_pred             ccccccCcc-------CCC-CCC-h------hHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhcccC
Q 047215          739 SLKSIIDPH-------LKG-NYS-P------ESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRTD  799 (851)
Q Consensus       739 ~~~~i~d~~-------l~~-~~~-~------~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~~  799 (851)
                      .........       ... ... .      ...+.+.+|+.+||+.||++|||++|+++|         +|+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H---------pff~~~  311 (318)
T d3blha1         245 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH---------DFFWSD  311 (318)
T ss_dssp             TSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS---------GGGSSS
T ss_pred             hccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC---------hhhccC
Confidence            000000000       000 000 0      113457789999999999999999999999         999853

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-42  Score=375.70  Aligned_cols=265  Identities=22%  Similarity=0.325  Sum_probs=199.4

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC------
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN------  582 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~------  582 (851)
                      .++|+..++||+|+||+||+|+. .+++.||||++...  +....+.+.+|+++|++++|||||+++++|...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            46899999999999999999986 45889999998754  4445667899999999999999999999997654      


Q ss_pred             cEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccc
Q 047215          583 EMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSK  662 (851)
Q Consensus       583 ~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~  662 (851)
                      .+++||||+ +.+|..+++.   ..+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~---~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~  169 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR  169 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             eEEEEEecc-cccHHHHHHh---ccccHHHHHHHHHHHHHHHHHHHh---CCCcccccCcchhhccccccccccccccee
Confidence            579999999 5577777643   358999999999999999999995   999999999999999999999999999998


Q ss_pred             cCCCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHH-----Hhh
Q 047215          663 TGPSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMK-----WQK  736 (851)
Q Consensus       663 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~-----~~~  736 (851)
                      ....     ......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||.................     ...
T Consensus       170 ~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
T d1cm8a_         170 QADS-----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ  244 (346)
T ss_dssp             ECCS-----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred             ccCC-----ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHh
Confidence            6432     1244679999999999876 4679999999999999999999999976543222111110000     000


Q ss_pred             ----------hcccccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          737 ----------QRSLKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       737 ----------~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                                ...........+ ........+.+.+|+.+||+.||.+|||++|+|+|         +|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H---------p~f~~  306 (346)
T d1cm8a_         245 RLQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH---------PYFES  306 (346)
T ss_dssp             TCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS---------GGGTT
T ss_pred             hhcchhhhhhhccCCcccccch-HHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC---------hhhCc
Confidence                      000000000000 11123345668899999999999999999999999         89864

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-42  Score=375.71  Aligned_cols=266  Identities=24%  Similarity=0.305  Sum_probs=198.4

Q ss_pred             CCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc------CCcEEE
Q 047215          514 NFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE------QNEMIL  586 (851)
Q Consensus       514 ~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~------~~~~~l  586 (851)
                      +|+..++||+|+||+||+|+.. .++.||||++......    +.+|+++|++++||||+++++++..      ...++|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS----CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH----HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            5778889999999999999974 5789999998654322    3479999999999999999999843      235799


Q ss_pred             EEEecCCcchhhhccC-CCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC-eEEEeeccccccC
Q 047215          587 VYEYMANGTLRSHLFG-SDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF-VAKMSDFGLSKTG  664 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~-~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~-~~kl~DFGla~~~  664 (851)
                      |||||+++.+..+... .....+++.++..++.|++.||+|||+   ++|+||||||+|||++.++ .+||+|||+++..
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~---~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh---cCCcccCCCcceEEEecCCCceeEecccchhhc
Confidence            9999987755444321 234568999999999999999999995   9999999999999999765 8999999999864


Q ss_pred             CCCCccccccccccCCcccCcccccc-cCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHH------HHhhh
Q 047215          665 PSMEHTHVSTAVKGSFGYLDPEYFWR-QQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAM------KWQKQ  737 (851)
Q Consensus       665 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~------~~~~~  737 (851)
                      ....   ......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+.........      .+...
T Consensus       174 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~  250 (350)
T d1q5ka_         174 VRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM  250 (350)
T ss_dssp             CTTS---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred             cCCc---ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhh
Confidence            3322   2334579999999998865 579999999999999999999999997654332211110000      00000


Q ss_pred             -cccccccCccC-----CCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          738 -RSLKSIIDPHL-----KGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       738 -~~~~~i~d~~l-----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                       .......-+..     .....+..++.+.+|+.+||+.||++|||++|+|+|         +|+++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H---------p~f~~  308 (350)
T d1q5ka_         251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH---------SFFDE  308 (350)
T ss_dssp             CC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS---------GGGGG
T ss_pred             ccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC---------Hhhcc
Confidence             00000000110     111123455678999999999999999999999999         88864

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-41  Score=371.59  Aligned_cols=272  Identities=22%  Similarity=0.295  Sum_probs=201.9

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC-ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCC----cEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ-SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQN----EMI  585 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~----~~~  585 (851)
                      +.+|+..++||+|+||+||+|+. .+++.+|||++... .....+.+.+|+++|++++||||+++++++....    ..+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            35799999999999999999985 57889999998754 3444567899999999999999999999996543    335


Q ss_pred             EEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCC
Q 047215          586 LVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGP  665 (851)
Q Consensus       586 lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~  665 (851)
                      ++++|+.+|+|.+++...   .+++.++..++.|++.||+|||+   ++||||||||+||||+.++.+||+|||+++...
T Consensus        87 ~l~~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~---~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~  160 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD  160 (345)
T ss_dssp             EEEEECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCcceEEECCCCCEEEcccCceeecc
Confidence            555677799999999643   58999999999999999999995   899999999999999999999999999997643


Q ss_pred             CCCc-cccccccccCCcccCccccc-ccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcc----
Q 047215          666 SMEH-THVSTAVKGSFGYLDPEYFW-RQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS----  739 (851)
Q Consensus       666 ~~~~-~~~~~~~~gt~~y~aPE~~~-~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~----  739 (851)
                      .... ........||+.|+|||++. ...++.++||||+||+++||++|+.||......+................    
T Consensus       161 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (345)
T d1pmea_         161 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI  240 (345)
T ss_dssp             GGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTC
T ss_pred             CCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhh
Confidence            3211 12234567999999999985 45679999999999999999999999976543322211111000000000    


Q ss_pred             -----ccc-ccCccCCC----CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          740 -----LKS-IIDPHLKG----NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       740 -----~~~-i~d~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                           ... ...+....    ...+..+..+.+|+.+||+.||.+|||++|+|+|         +|++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h---------pf~~~  300 (345)
T d1pmea_         241 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH---------PYLEQ  300 (345)
T ss_dssp             CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS---------GGGTT
T ss_pred             hhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC---------Hhhcc
Confidence                 000 00000000    0112334568999999999999999999999999         88764

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-41  Score=360.04  Aligned_cols=268  Identities=21%  Similarity=0.293  Sum_probs=209.6

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEccCCcEEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      ++|+..++||+|+||+||+|+. .+++.||||+++..  .......+.+|+.+|++++||||+++++++......++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            5789999999999999999996 46788999987543  33456789999999999999999999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeeccccccCCCCCc
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSMEH  669 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~  669 (851)
                      ++.+++|..++...  ..+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||.++.......
T Consensus        82 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~q~~~aL~~lH~---~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~  156 (292)
T d1unla_          82 FCDQDLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR  156 (292)
T ss_dssp             CCSEEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS
T ss_pred             eccccccccccccc--cccchhHHHHHHHHHHHHHHHhhc---CCEeeecccCcccccccCCceeeeecchhhcccCCCc
Confidence            99999998887544  467899999999999999999995   8999999999999999999999999999987443222


Q ss_pred             cccccccccCCcccCcccccccC-CCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhc---cc---cc
Q 047215          670 THVSTAVKGSFGYLDPEYFWRQQ-LTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQR---SL---KS  742 (851)
Q Consensus       670 ~~~~~~~~gt~~y~aPE~~~~~~-~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~---~~---~~  742 (851)
                        ......+++.|+|||.+.... ++.++|||||||++|||++|+.||.......+  ............   ..   ..
T Consensus       157 --~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  232 (292)
T d1unla_         157 --CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD--QLKRIFRLLGTPTEEQWPSMTK  232 (292)
T ss_dssp             --CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH--HHHHHHHHHCCCCTTTCTTGGG
T ss_pred             --cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHH--HHHHHHhhcCCCChhhhhhhhh
Confidence              223445788999999987654 69999999999999999999999765432221  111111111100   00   00


Q ss_pred             ccC---------ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          743 IID---------PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       743 i~d---------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      ..+         ..-.....+...+.+.+|+.+||+.||++|||++|+|+|         +|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H---------p~f~~  288 (292)
T d1unla_         233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH---------PYFSD  288 (292)
T ss_dssp             STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS---------GGGSS
T ss_pred             cccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC---------hhhcC
Confidence            000         000112234455678999999999999999999999999         99864

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.4e-40  Score=362.94  Aligned_cols=263  Identities=18%  Similarity=0.248  Sum_probs=203.0

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcC-CcceeeEEEEEc--cCCcEEEEE
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGFCD--EQNEMILVY  588 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~--~~~~~~lV~  588 (851)
                      ++|++.++||+|+||+||+|+. .+++.||||++....   .+.+.+|+++|++++ ||||+++++++.  ....+++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            6799999999999999999987 567899999987543   456889999999995 999999999986  345799999


Q ss_pred             EecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-CCeEEEeeccccccCCCC
Q 047215          589 EYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-NFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       589 Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-~~~~kl~DFGla~~~~~~  667 (851)
                      ||+++++|..+.     ..+++.++..++.||+.||.|||+   ++|+||||||+|||++. ++.+||+|||+++.....
T Consensus       112 e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~---~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~  183 (328)
T d3bqca1         112 EHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG  183 (328)
T ss_dssp             ECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT
T ss_pred             eecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhh---cccccccccccceEEcCCCCeeeecccccceeccCC
Confidence            999999998764     358999999999999999999995   99999999999999985 457999999999864332


Q ss_pred             CccccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchh-cHHHH------HHHHhhhcc
Q 047215          668 EHTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQI-NLADW------AMKWQKQRS  739 (851)
Q Consensus       668 ~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~-~l~~~------~~~~~~~~~  739 (851)
                      .   ......||+.|+|||.+.+. .++.++||||+||+++||++|+.||......... .....      ...+.....
T Consensus       184 ~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~  260 (328)
T d3bqca1         184 Q---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN  260 (328)
T ss_dssp             C---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred             C---cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcc
Confidence            2   23456789999999998765 5799999999999999999999998765432211 00000      000000000


Q ss_pred             c------ccccC--------ccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          740 L------KSIID--------PHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       740 ~------~~i~d--------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                      .      ..+..        ...........++.+.+|+.+||+.||++|||++|+|+|         +|+++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H---------p~F~~  324 (328)
T d3bqca1         261 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH---------PYFYT  324 (328)
T ss_dssp             CCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS---------GGGTT
T ss_pred             cccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC---------cccCC
Confidence            0      00000        001111123455678999999999999999999999999         99875

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.4e-40  Score=356.32  Aligned_cols=261  Identities=16%  Similarity=0.185  Sum_probs=196.2

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcceeeE-EEEEccCCcEEEEEEe
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSL-IGFCDEQNEMILVYEY  590 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l-~g~~~~~~~~~lV~Ey  590 (851)
                      ++|++.+.||+|+||.||+|+. .+++.||||++.....  ..++..|++++++++|+|++.. .++...++..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            5799999999999999999986 4578999998765432  2457889999999987765555 5555777888999999


Q ss_pred             cCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEc---CCCeEEEeeccccccCCCC
Q 047215          591 MANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLD---ENFVAKMSDFGLSKTGPSM  667 (851)
Q Consensus       591 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld---~~~~~kl~DFGla~~~~~~  667 (851)
                      +.+ +|.+.+... ...+++.++..++.|++.||+|||+   ++||||||||+|||++   .+..+||+|||+|+.....
T Consensus        85 ~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~  159 (299)
T d1ckia_          85 LGP-SLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA  159 (299)
T ss_dssp             CCC-BHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCT
T ss_pred             cCC-chhhhhhhc-cCCCcHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHhhccccccCCCceeeeeccCcceecccc
Confidence            955 555554332 2468999999999999999999995   8999999999999985   4668999999999864332


Q ss_pred             Cc-----cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhccccc
Q 047215          668 EH-----THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLKS  742 (851)
Q Consensus       668 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  742 (851)
                      ..     ........||+.|+|||.+.+..++.++|||||||++|||++|+.||......................    
T Consensus       160 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~----  235 (299)
T d1ckia_         160 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST----  235 (299)
T ss_dssp             TTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHS----
T ss_pred             ccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCC----
Confidence            21     122345679999999999999999999999999999999999999997654433222211111110000    


Q ss_pred             ccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 047215          743 IIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVL  789 (851)
Q Consensus       743 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  789 (851)
                       ..+.+    ...+++.+.+++.+||+.+|++||+++++.+.|+.+.
T Consensus       236 -~~~~~----~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~  277 (299)
T d1ckia_         236 -PIEVL----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  277 (299)
T ss_dssp             -CHHHH----TTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHH
T ss_pred             -ChhHh----ccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence             00111    1234566899999999999999999999988877654

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=5.6e-40  Score=352.18  Aligned_cols=263  Identities=16%  Similarity=0.180  Sum_probs=207.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCCChhhHHHHHHHHHHHHhcCC-cceeeEEEEEccCCcEEEEEE
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQSEQGLAEFETEIEMLSKLRH-RHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H-pnIv~l~g~~~~~~~~~lV~E  589 (851)
                      .++|++.++||+|+||+||+|+.. +++.+|||.+.....  ...+.+|++.++.+.| +|++.+++++..+...++|||
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme   81 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   81 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence            368999999999999999999964 678899998754432  2356789999999965 899999999999999999999


Q ss_pred             ecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcC-----CCeEEEeeccccccC
Q 047215          590 YMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDE-----NFVAKMSDFGLSKTG  664 (851)
Q Consensus       590 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~-----~~~~kl~DFGla~~~  664 (851)
                      |+ +++|.+++.... ..+++.++..++.|++.||+|||+   ++||||||||+|||++.     ++.+||+|||+++..
T Consensus        82 ~~-~~~l~~~~~~~~-~~~~~~~~~~i~~q~~~~l~~lH~---~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~  156 (293)
T d1csna_          82 LL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY  156 (293)
T ss_dssp             CC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred             ec-CCCHHHHHHhhc-cchhhHHHHHHHHHHHHHHHHHHH---CCceeccCCccceeecCcccccCCceEEcccceeEEc
Confidence            99 679988885443 468999999999999999999994   99999999999999964     578999999999864


Q ss_pred             CCCCc-----cccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcc
Q 047215          665 PSMEH-----THVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS  739 (851)
Q Consensus       665 ~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  739 (851)
                      .....     ........||+.|||||++.+..++.++|||||||++|||++|+.||.......................
T Consensus       157 ~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~  236 (293)
T d1csna_         157 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP  236 (293)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred             ccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCC
Confidence            32211     1123456799999999999999999999999999999999999999986554433322222211111111


Q ss_pred             cccccCccCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 047215          740 LKSIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQ  790 (851)
Q Consensus       740 ~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  790 (851)
                      ..     .+    ...+++.+.+++..|++.+|++||+++.+.+.|+.+++
T Consensus       237 ~~-----~l----~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~  278 (293)
T d1csna_         237 LR-----EL----CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE  278 (293)
T ss_dssp             HH-----HH----TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             hH-----Hh----cCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHH
Confidence            11     11    12344668999999999999999999999888877654

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-41  Score=365.38  Aligned_cols=258  Identities=24%  Similarity=0.321  Sum_probs=207.1

Q ss_pred             cCCceeeeeeeecceEEEEEEEc----CcceeEEeecCCC----ChhhHHHHHHHHHHHHhcCC-cceeeEEEEEccCCc
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE----DCTLAAIKRANPQ----SEQGLAEFETEIEMLSKLRH-RHLVSLIGFCDEQNE  583 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~----~~~~vavK~~~~~----~~~~~~~~~~Ei~~l~~l~H-pnIv~l~g~~~~~~~  583 (851)
                      ++|+..++||+|+||+||+|+..    .++.+|||.+...    .....+.+.+|+++|++++| |||+++++++.....
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            56999999999999999999852    4678999987643    22334568899999999966 899999999999999


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .+++|||+.+|+|.+++....  .+.+.....++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~  178 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKE  178 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred             eeeeeecccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhc---CCEEeccCCccceeecCCCCEEEeeccchhh
Confidence            999999999999999986543  46788899999999999999995   8999999999999999999999999999976


Q ss_pred             CCCCCccccccccccCCcccCccccccc--CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcccc
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQ--QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRSLK  741 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  741 (851)
                      .... .........|++.|++||.+.+.  .++.++|||||||+||||++|+.||......+.....  .....      
T Consensus       179 ~~~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i--~~~~~------  249 (322)
T d1vzoa_         179 FVAD-ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI--SRRIL------  249 (322)
T ss_dssp             CCGG-GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHH--HHHHH------
T ss_pred             hccc-ccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHhcc------
Confidence            4332 22233456799999999999754  5788999999999999999999999776544322111  11110      


Q ss_pred             cccCccCCCCCChhHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHHHhhhhhccc
Q 047215          742 SIIDPHLKGNYSPESLEKFGEIAEKCLDDEGKNRP-----TMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       742 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~L~~~~~~~~~w~~~  798 (851)
                         ..  ...++...++.+.+|+.+||+.||.+||     |++|+++|         +|++.
T Consensus       250 ---~~--~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H---------pff~~  297 (322)
T d1vzoa_         250 ---KS--EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH---------LFFQK  297 (322)
T ss_dssp             ---HC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS---------GGGTT
T ss_pred             ---cC--CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC---------HhhcC
Confidence               00  1123345667799999999999999999     58999999         88764

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-40  Score=365.29  Aligned_cols=266  Identities=21%  Similarity=0.269  Sum_probs=195.8

Q ss_pred             cCCceeeeeeeecceEEEEEEEc-CcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEc------cCCc
Q 047215          513 NNFDESLMIGVGGFGKVFKGEIE-DCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCD------EQNE  583 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~------~~~~  583 (851)
                      ++|++.++||+|+||+||+|+.. +++.+|||++...  +......+.+|+.+|++++|||||++++++.      ..+.
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            67999999999999999999875 5889999998654  4455567899999999999999999999985      3468


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      +|+||||+.++.+... .    ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+|++|||+++.
T Consensus        97 ~~iv~Ey~~~~l~~~~-~----~~~~~~~i~~~~~qil~gl~~LH~---~giiHrDlKP~Nil~~~~~~~kl~df~~~~~  168 (355)
T d2b1pa1          97 VYLVMELMDANLCQVI-Q----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART  168 (355)
T ss_dssp             EEEEEECCSEEHHHHH-T----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             eEEEEeccchHHHHhh-h----cCCCHHHHHHHHHHHHHHHHHhhh---cccccccCCccccccccccceeeechhhhhc
Confidence            8999999987655544 2    347899999999999999999996   8999999999999999999999999999876


Q ss_pred             CCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHH---------H----
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAD---------W----  730 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~---------~----  730 (851)
                      ...   ........||+.|+|||++.+..++.++||||+||+++||++|+.||.............         +    
T Consensus       169 ~~~---~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~  245 (355)
T d2b1pa1         169 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL  245 (355)
T ss_dssp             ---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTS
T ss_pred             ccc---ccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHh
Confidence            332   223345678999999999999999999999999999999999999997553222111000         0    


Q ss_pred             ---HHHHhhhc-cc-----ccccCccCCC---CCChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          731 ---AMKWQKQR-SL-----KSIIDPHLKG---NYSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       731 ---~~~~~~~~-~~-----~~i~d~~l~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                         ........ ..     ..........   ......+..+.+|+.+||+.||++|||++|+|+|         +|++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H---------pw~~~  316 (355)
T d2b1pa1         246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH---------PYINV  316 (355)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS---------TTTGG
T ss_pred             hhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC---------cccCC
Confidence               00000000 00     0000000000   1113356788999999999999999999999999         88864

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-40  Score=365.12  Aligned_cols=264  Identities=21%  Similarity=0.297  Sum_probs=200.5

Q ss_pred             hcCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCC--ChhhHHHHHHHHHHHHhcCCcceeeEEEEEcc-----CCc
Q 047215          512 TNNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQ--SEQGLAEFETEIEMLSKLRHRHLVSLIGFCDE-----QNE  583 (851)
Q Consensus       512 t~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~-----~~~  583 (851)
                      .++|+..++||+|+||+||+|+. .+++.||||++...  +....+.+.+|+++|++++|||||++++++..     ...
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            46799999999999999999986 56889999998754  34455678999999999999999999999853     334


Q ss_pred             EEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          584 MILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       584 ~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      .+++++|+.+|+|.+++...   .+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+|++|||++..
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~---~l~e~~~~~i~~qil~aL~~LH~---~giiHrDiKp~NILi~~~~~~kl~dfg~a~~  170 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH  170 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC----C
T ss_pred             eEEEEEeecCCchhhhcccc---cccHHHHHHHHHHHHHHHHHHHh---CCCcccccCCccccccccccccccccchhcc
Confidence            56777888999999998543   58999999999999999999995   8999999999999999999999999999875


Q ss_pred             CCCCCccccccccccCCcccCccccccc-CCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcHHHHHHHHhhhcc---
Q 047215          664 GPSMEHTHVSTAVKGSFGYLDPEYFWRQ-QLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLADWAMKWQKQRS---  739 (851)
Q Consensus       664 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l~~~~~~~~~~~~---  739 (851)
                      ..     .......||+.|+|||.+.+. .++.++|||||||++|||++|+.||...........   .........   
T Consensus       171 ~~-----~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~---i~~~~~~~~~~~  242 (348)
T d2gfsa1         171 TD-----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL---ILRLVGTPGAEL  242 (348)
T ss_dssp             CT-----GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH---HHHHHCCCCHHH
T ss_pred             cC-----cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHH---HHHhcCCCChHH
Confidence            32     223456789999999987665 568999999999999999999999976533221111   110000000   


Q ss_pred             --------cccccC--ccCCC-C---CChhHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhhhhhccc
Q 047215          740 --------LKSIID--PHLKG-N---YSPESLEKFGEIAEKCLDDEGKNRPTMGEVLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       740 --------~~~i~d--~~l~~-~---~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~w~~~  798 (851)
                              ......  +.... .   .....++.+.+|+.+||+.||.+|||++|+|+|         +|++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H---------p~f~~  306 (348)
T d2gfsa1         243 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH---------AYFAQ  306 (348)
T ss_dssp             HTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS---------GGGTT
T ss_pred             hhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC---------HhhCC
Confidence                    000000  00000 0   012345668999999999999999999999999         89874

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.2e-35  Score=328.08  Aligned_cols=269  Identities=19%  Similarity=0.252  Sum_probs=197.3

Q ss_pred             cCCceeeeeeeecceEEEEEEE-cCcceeEEeecCCCChhhHHHHHHHHHHHHhcC-----------CcceeeEEEEEcc
Q 047215          513 NNFDESLMIGVGGFGKVFKGEI-EDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-----------HRHLVSLIGFCDE  580 (851)
Q Consensus       513 ~~f~~~~~LG~G~fG~Vykg~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-----------HpnIv~l~g~~~~  580 (851)
                      ++|++.++||+|+||+||+|+. .+++.||||++.... ...+.+.+|++++++++           |+||+++++++..
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~   91 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   91 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence            3589999999999999999986 568899999987543 33467788999998875           5789999998854


Q ss_pred             --CCcEEEEEEecCCcch-hhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCC------
Q 047215          581 --QNEMILVYEYMANGTL-RSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENF------  651 (851)
Q Consensus       581 --~~~~~lV~Ey~~~gsL-~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~------  651 (851)
                        ....+++++++..+.. ...........+++..+..++.|++.||+|||+  ..+|+||||||+||||+.++      
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~~  169 (362)
T d1q8ya_          92 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLI  169 (362)
T ss_dssp             EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred             ccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCcccccc
Confidence              3566777777655543 333334445678889999999999999999996  58999999999999997654      


Q ss_pred             eEEEeeccccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHHHHHHhCCcCCCCCCCcchhcH----
Q 047215          652 VAKMSDFGLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINL----  727 (851)
Q Consensus       652 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL~eLltG~~p~~~~~~~~~~~l----  727 (851)
                      .+|++|||.+.....     ......||+.|+|||++....++.++||||+||+++||++|+.||.+.........    
T Consensus       170 ~~kl~dfg~s~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~  244 (362)
T d1q8ya_         170 QIKIADLGNACWYDE-----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI  244 (362)
T ss_dssp             EEEECCCTTCEETTB-----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred             eeeEeeccccccccc-----ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHH
Confidence            499999999875322     22345799999999999999999999999999999999999999876433221111    


Q ss_pred             HHHHHHHh-------hhc-----------ccccccCc---------cCCCCCChhHHHHHHHHHHHhcccCCCCCCCHHH
Q 047215          728 ADWAMKWQ-------KQR-----------SLKSIIDP---------HLKGNYSPESLEKFGEIAEKCLDDEGKNRPTMGE  780 (851)
Q Consensus       728 ~~~~~~~~-------~~~-----------~~~~i~d~---------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~e  780 (851)
                      ........       ...           ....+...         ..........+..+.+|+.+||+.||.+|||++|
T Consensus       245 ~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e  324 (362)
T d1q8ya_         245 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG  324 (362)
T ss_dssp             HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred             HHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHH
Confidence            11111000       000           00000000         0122344667788999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhhccc
Q 047215          781 VLWHLEYVLQLHEAWMRT  798 (851)
Q Consensus       781 vl~~L~~~~~~~~~w~~~  798 (851)
                      +|+|         +|+++
T Consensus       325 ~L~H---------p~f~~  333 (362)
T d1q8ya_         325 LVNH---------PWLKD  333 (362)
T ss_dssp             HHTC---------GGGTT
T ss_pred             HhcC---------cccCC
Confidence            9999         99874

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.84  E-value=3e-21  Score=192.06  Aligned_cols=168  Identities=16%  Similarity=0.127  Sum_probs=120.5

Q ss_pred             eeeeeeeecceEEEEEEEcCcceeEEeecCCCCh------------------hhHHHHHHHHHHHHhcCCcceeeEEEEE
Q 047215          517 ESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSE------------------QGLAEFETEIEMLSKLRHRHLVSLIGFC  578 (851)
Q Consensus       517 ~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~------------------~~~~~~~~Ei~~l~~l~HpnIv~l~g~~  578 (851)
                      +.++||+|+||+||+|+..+++.||||++.....                  .....+..|...+.++.|++++..+++.
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            4678999999999999988899999997643210                  1123456789999999999999988764


Q ss_pred             ccCCcEEEEEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcCCCCCeEEcCCCCCCeEEcCCCeEEEeec
Q 047215          579 DEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDF  658 (851)
Q Consensus       579 ~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~~~~~iiHrDlk~~NILld~~~~~kl~DF  658 (851)
                      .    .+++|||++++.+.+         +++....+++.|++++|+|||+   .+|+||||||+|||++++ .++|+||
T Consensus        84 ~----~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~---~giiHrDiKP~NILv~~~-~~~liDF  146 (191)
T d1zara2          84 G----NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVSEE-GIWIIDF  146 (191)
T ss_dssp             T----TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEETT-EEEECCC
T ss_pred             C----CEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhh---CCEEEccCChhheeeeCC-CEEEEEC
Confidence            3    379999999876643         3445667899999999999995   899999999999999865 5899999


Q ss_pred             cccccCCCCCccccccccccCCcccCcccccccCCCchHHHHHHHHHH
Q 047215          659 GLSKTGPSMEHTHVSTAVKGSFGYLDPEYFWRQQLTEKSDVYSFGVVL  706 (851)
Q Consensus       659 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDVwS~GvvL  706 (851)
                      |+|+..............+   .. -.|.+ .+.|+.++|+||..--+
T Consensus       147 G~a~~~~~~~~~~~l~rd~---~~-~~~~f-~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         147 PQSVEVGEEGWREILERDV---RN-IITYF-SRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             TTCEETTSTTHHHHHHHHH---HH-HHHHH-HHHHCCCCCHHHHHHHH
T ss_pred             CCcccCCCCCcHHHHHHHH---HH-HHHHH-cCCCCCcccHHHHHHHH
Confidence            9987643221110000000   00 01112 35678889999975443

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.32  E-value=1.3e-06  Score=88.75  Aligned_cols=148  Identities=15%  Similarity=0.063  Sum_probs=100.0

Q ss_pred             HHHHhcCCceeeeeeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEE
Q 047215          508 IRVATNNFDESLMIGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       508 l~~~t~~f~~~~~LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~l  586 (851)
                      ++.--..|...+..+-++.+.||+...+++ .+++|+...........+.+|..++..+. |--+.+++.++..++..++
T Consensus         9 l~~~~~~~~~~~~~~G~s~~~v~rv~~~~~-~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~l   87 (263)
T d1j7la_           9 LKKLIEKYRCVKDTEGMSPAKVYKLVGENE-NLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HHHHHTTSEEEECSCCCSSSEEEEEECSSC-EEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             HHHhhhceEEEEcCCCCCCCcEEEEEeCCC-eEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEE
Confidence            333345565555433344578998875544 45777766554444456788999988774 4446678888888889999


Q ss_pred             EEEecCCcchhhhccCCCCCCCchhhhHHHHHHHHHHHHHhhcC------------------------------------
Q 047215          587 VYEYMANGTLRSHLFGSDLPPLTWKQRLDACIGAARGLHYLHTG------------------------------------  630 (851)
Q Consensus       587 V~Ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs~------------------------------------  630 (851)
                      ||+++++.++.+....       .....+++.++++.|..||+.                                    
T Consensus        88 v~~~l~G~~~~~~~~~-------~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (263)
T d1j7la_          88 LMSEADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE  160 (263)
T ss_dssp             EEECCSSEEHHHHTTT-------CSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGST
T ss_pred             EEEecccccccccccc-------cccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccc
Confidence            9999999888665421       122334555566666666631                                    


Q ss_pred             --------------------CCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          631 --------------------AERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       631 --------------------~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                                          ....++|+|+.+.|||++++..+-|+||+.+..
T Consensus       161 ~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             TCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                                122379999999999999877777999998754

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.79  E-value=6.6e-05  Score=75.29  Aligned_cols=130  Identities=19%  Similarity=0.191  Sum_probs=86.9

Q ss_pred             eeeecc-eEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCC--cceeeEEEEEccCCcEEEEEEecCCcchh
Q 047215          521 IGVGGF-GKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRH--RHLVSLIGFCDEQNEMILVYEYMANGTLR  597 (851)
Q Consensus       521 LG~G~f-G~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H--pnIv~l~g~~~~~~~~~lV~Ey~~~gsL~  597 (851)
                      +..|.. +.||+...+++..+++|.......   ..+..|...++.+..  -.+.++++++..++..++||+++++-++.
T Consensus        18 ~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~---~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~   94 (255)
T d1nd4a_          18 QTIGCSDAAVFRLSAQGRPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL   94 (255)
T ss_dssp             CSCTTSSCEEEEEECTTSCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             cCCcccCCeEEEEEeCCCCEEEEEeCCccCH---hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence            444543 679999888887788887665432   346778888887743  33567788888888999999999987764


Q ss_pred             hhccCCCCCCCchhhhHHHHHHHHHHHHHhhc------------------------------------------------
Q 047215          598 SHLFGSDLPPLTWKQRLDACIGAARGLHYLHT------------------------------------------------  629 (851)
Q Consensus       598 ~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLHs------------------------------------------------  629 (851)
                      +..       ..   ...++.++++.|.-||+                                                
T Consensus        95 ~~~-------~~---~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (255)
T d1nd4a_          95 SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR  164 (255)
T ss_dssp             TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred             ccc-------cc---HHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHH
Confidence            321       00   11122233333333332                                                


Q ss_pred             -------CCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          630 -------GAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       630 -------~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                             .....++|+|+.+.|||++++..+-|+||+.+..
T Consensus       165 l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         165 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence                   0123489999999999999877778999998654

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=96.84  E-value=0.00095  Score=71.40  Aligned_cols=76  Identities=18%  Similarity=0.106  Sum_probs=47.7

Q ss_pred             eeeeeeecceEEEEEEEcC-cceeEEeecCCC-------ChhhHHHHHHHHHHHHhcC-C--cceeeEEEEEccCCcEEE
Q 047215          518 SLMIGVGGFGKVFKGEIED-CTLAAIKRANPQ-------SEQGLAEFETEIEMLSKLR-H--RHLVSLIGFCDEQNEMIL  586 (851)
Q Consensus       518 ~~~LG~G~fG~Vykg~~~~-~~~vavK~~~~~-------~~~~~~~~~~Ei~~l~~l~-H--pnIv~l~g~~~~~~~~~l  586 (851)
                      .+.||.|....||+.+..+ ++.+++|...+.       -+........|.+.|+.+. +  ..+.+++.+..  ...++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d~--~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDT--EMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEET--TTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEcC--CCCEE
Confidence            4468999999999998654 456778854321       1112334556888887662 2  34566666654  35589


Q ss_pred             EEEecCCcc
Q 047215          587 VYEYMANGT  595 (851)
Q Consensus       587 V~Ey~~~gs  595 (851)
                      |||++++..
T Consensus       109 vmE~L~~~~  117 (392)
T d2pula1         109 VMEDLSHLK  117 (392)
T ss_dssp             EECCCTTSE
T ss_pred             EEeccCCcc
Confidence            999997654

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.30  E-value=0.0042  Score=64.33  Aligned_cols=135  Identities=12%  Similarity=0.091  Sum_probs=78.7

Q ss_pred             ceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcce--eeEEE-----EEccCCcEEEEEEecCCcchhh
Q 047215          526 FGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHL--VSLIG-----FCDEQNEMILVYEYMANGTLRS  598 (851)
Q Consensus       526 fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnI--v~l~g-----~~~~~~~~~lV~Ey~~~gsL~~  598 (851)
                      --.||+.+.++|..+++|...+. ....+++..|+..+..|...++  +..+.     ....++..+.++++++|..+..
T Consensus        35 EN~vy~v~~~dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~  113 (325)
T d1zyla1          35 ENRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEA  113 (325)
T ss_dssp             SSEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCS
T ss_pred             cceeEEEEcCCCCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCC
Confidence            35799999999999999987654 2234667789988888753222  11111     2234567889999998754421


Q ss_pred             ------------------hccCCC---CCCCc-------------------hhhhHHHHHHHHHHHHHhh----cCCCCC
Q 047215          599 ------------------HLFGSD---LPPLT-------------------WKQRLDACIGAARGLHYLH----TGAERG  634 (851)
Q Consensus       599 ------------------~L~~~~---~~~l~-------------------~~~~~~i~~~ia~gL~yLH----s~~~~~  634 (851)
                                        ......   ...++                   ...+..+...+.+.+..+.    +....+
T Consensus       114 ~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~  193 (325)
T d1zyla1         114 DNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVL  193 (325)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCE
T ss_pred             CCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCce
Confidence                              000000   11111                   1111111112222233332    223457


Q ss_pred             eEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          635 IIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       635 iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      +||+|+.+.|||++++  ..++||+-+..
T Consensus       194 liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         194 RLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             ECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             eecCCCCcccEEEeCC--ceEEechhccc
Confidence            9999999999999754  45899998875

>d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: Galactose-binding domain-like
superfamily: Galactose-binding domain-like
family: YxiM N-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=96.18  E-value=0.017  Score=51.77  Aligned_cols=81  Identities=16%  Similarity=0.240  Sum_probs=65.0

Q ss_pred             cCceeeEeeccceEEEEEEeccCCCCCcccccceEEEEEcceEEeecCCCCccccccccccccCCCCCcccceEEEEEee
Q 047215           84 DGLNYTFEIIAGNYIVRLHFCPFPFEDYNVNKSSFGVVANGLKLLSEFSAPGEISHRNLYLQSSGGNSSSISLVKEYFLG  163 (851)
Q Consensus        84 ~~~~y~~~~~~g~~~~R~~f~~~~~~~~~~~~~~f~v~~~g~~~l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~  163 (851)
                      ..+.|.++|+.|.|.|+++|-.         ....+|.+.|...+.+|...                    ..-+.|.|.
T Consensus        63 ~~~~f~v~vPnG~Y~Vtv~~Gd---------~~~~~~~~eg~~~~~~~~g~--------------------~~~~~~~V~  113 (146)
T d2o14a1          63 SNNTFNVDLPNGLYEVKVTLGN---------TARASVAAEGVFQVINMTGD--------------------GAEDTFQIP  113 (146)
T ss_dssp             CSCCEEEECCSEEEEEEEEESS---------CSEEEEEETTEEEEEEEEST--------------------TCEEEEEEE
T ss_pred             CCceEEEECCCCeEEEEEEEec---------CCCccEEEeeEEeccccCCc--------------------cEEEEEEEE
Confidence            3467999999999999999953         23457899999888887642                    123678888


Q ss_pred             ccCCeEEEEEecCC-CcceeeeeeEEEeccc
Q 047215          164 VDLDKLMIEFIPSK-GSFGFINAIEIVPVVD  193 (851)
Q Consensus       164 ~~~~~~~i~f~~~~-~~~~fi~~iEl~~~~~  193 (851)
                      +.++.|.|.|.... +..|=||+|||.++++
T Consensus       114 VtDG~L~l~ft~~~~G~~~~in~l~I~~~~d  144 (146)
T d2o14a1         114 VTDGQLNLLVTEGKAGTAFTLSALKIKKLSD  144 (146)
T ss_dssp             ECSSEEEEEEEESSTTSCCEEEEEEEEEEES
T ss_pred             EECCeEEEEEecCCCCCccEEEEEEEEeccc
Confidence            98889999998665 6789999999998875

>d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: Galactose-binding domain-like
superfamily: Galactose-binding domain-like
family: YxiM N-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=96.04  E-value=0.0028  Score=57.16  Aligned_cols=79  Identities=18%  Similarity=0.154  Sum_probs=53.2

Q ss_pred             eeeeeecCCCCceEEEEEeeeEEEecCCeEEEEEEEcCccccCCcchhhhcCCCCceeEEEeEecccccceeeeEEeCCc
Q 047215          298 MSWKFEVDPNFDYFVRLHFCELVYEKANQRIFRIYINNRTAENNFDIFVQAGGKNRGYHRDYFDAVSSKIETLWIQLGPD  377 (851)
Q Consensus       298 lt~~~~vd~~~~Y~v~LhF~Ei~~~~~~~R~FdI~in~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~  377 (851)
                      ..|.++| |++.|.|.++|.|.       ...++.+.|......+     +   +....+.|.+.+.++.|+  |.+...
T Consensus        65 ~~f~v~v-PnG~Y~Vtv~~Gd~-------~~~~~~~eg~~~~~~~-----~---g~~~~~~~~V~VtDG~L~--l~ft~~  126 (146)
T d2o14a1          65 NTFNVDL-PNGLYEVKVTLGNT-------ARASVAAEGVFQVINM-----T---GDGAEDTFQIPVTDGQLN--LLVTEG  126 (146)
T ss_dssp             CCEEEEC-CSEEEEEEEEESSC-------SEEEEEETTEEEEEEE-----E---STTCEEEEEEEECSSEEE--EEEEES
T ss_pred             ceEEEEC-CCCeEEEEEEEecC-------CCccEEEeeEEecccc-----C---CccEEEEEEEEEECCeEE--EEEecC
Confidence            5789999 89999999999993       2346667776554432     2   233445566667888888  444322


Q ss_pred             cCCCCCCchhhcccccccccc
Q 047215          378 TAVGAAGTDALLNGLEIFKFS  398 (851)
Q Consensus       378 ~~~~~~~~~~~lng~Ei~~~~  398 (851)
                      .+.    ..+.||++||-+++
T Consensus       127 ~~G----~~~~in~l~I~~~~  143 (146)
T d2o14a1         127 KAG----TAFTLSALKIKKLS  143 (146)
T ss_dssp             STT----SCCEEEEEEEEEEE
T ss_pred             CCC----CccEEEEEEEEecc
Confidence            221    36799999998875

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.69  E-value=0.017  Score=61.20  Aligned_cols=72  Identities=14%  Similarity=0.112  Sum_probs=47.6

Q ss_pred             eeeeeecceEEEEEEEcCc--------ceeEEeecCCCChhhHHHHHHHHHHHHhcC-CcceeeEEEEEccCCcEEEEEE
Q 047215          519 LMIGVGGFGKVFKGEIEDC--------TLAAIKRANPQSEQGLAEFETEIEMLSKLR-HRHLVSLIGFCDEQNEMILVYE  589 (851)
Q Consensus       519 ~~LG~G~fG~Vykg~~~~~--------~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~lV~E  589 (851)
                      +.|+-|-.-.+|+....++        ..+.+++.. .. ....+..+|..+++.+. |.-..++++++..    .+|+|
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~-~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~e  121 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NP-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  121 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Cc-chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEE
Confidence            4677788889999987643        233444433 22 22345678999999885 4333477887754    68999


Q ss_pred             ecCCcch
Q 047215          590 YMANGTL  596 (851)
Q Consensus       590 y~~~gsL  596 (851)
                      |+++-.|
T Consensus       122 fi~g~~l  128 (395)
T d1nw1a_         122 YIPSRPL  128 (395)
T ss_dssp             CCCEEEC
T ss_pred             EeccccC
Confidence            9987655

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.25  E-value=0.016  Score=59.18  Aligned_cols=158  Identities=13%  Similarity=0.099  Sum_probs=83.8

Q ss_pred             cCHHHHHHHhcCCceeee-----eeeecceEEEEEEEcCcceeEEeecCCCChhhHHHHHHHHHHHHhcCCcce--eeEE
Q 047215          503 FTLAEIRVATNNFDESLM-----IGVGGFGKVFKGEIEDCTLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHL--VSLI  575 (851)
Q Consensus       503 ~~~~~l~~~t~~f~~~~~-----LG~G~fG~Vykg~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~HpnI--v~l~  575 (851)
                      ++.++++....+|...++     |..|---+.|+.+.++++ +++|+.....  ...+...|++++..|.+.++  ...+
T Consensus         3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi   79 (316)
T d2ppqa1           3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL   79 (316)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred             CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-EEEEEcCCCC--CHHHHHHHHHHHHhhhhccccccccc
Confidence            456677777777765433     334555778998877765 6788765432  12345557777777743222  1111


Q ss_pred             E------EEccCCcEEEEEEecCCcchhhhc--------------c----CCCC----CC-----------------Cch
Q 047215          576 G------FCDEQNEMILVYEYMANGTLRSHL--------------F----GSDL----PP-----------------LTW  610 (851)
Q Consensus       576 g------~~~~~~~~~lV~Ey~~~gsL~~~L--------------~----~~~~----~~-----------------l~~  610 (851)
                      -      +...+.....++.++.+......-              +    ....    ..                 ...
T Consensus        80 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (316)
T d2ppqa1          80 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE  159 (316)
T ss_dssp             CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred             eecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcc
Confidence            1      112234566777777664432110              0    0000    00                 001


Q ss_pred             hhhHHHHHHHHHHHHHhh-cCCCCCeEEcCCCCCCeEEcCCCeEEEeecccccc
Q 047215          611 KQRLDACIGAARGLHYLH-TGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKT  663 (851)
Q Consensus       611 ~~~~~i~~~ia~gL~yLH-s~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~  663 (851)
                      ......+......+.-.+ .....++||+|+.+.||+++.+...-|.||+.+..
T Consensus       160 ~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         160 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             hhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEeccccccc
Confidence            111122222222222222 12356899999999999999888788999998754