Your job contains 1 sequence.
>047219
MASLRRLAKTASVWRVLTASRASPRGQPRRLPHRSLEQQIRFSASEIQRPKLLDDTPGPS
SIHPAILAGLFGVGALNIAYADGDQGAGTAKPSLPSESSSSYENLEEIAKKERQRIEELL
KRKGMHYGSCPTFTVAVKGQKVTIKFQVPPACEIPQLIANLVSHLGLKVEEHGGGSDMGL
RAWDSAVAWQLTLKPPEKQNESGGDRAQSGDMNAREGDLCILIFRSLITSDKPEIEFIKK
GSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLSL
QSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVP
LEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLL
RQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHLTKA
ELAELATATEEMSGRDIRDVCQQAERSWASKIIRGQITKDGEQACLPPLQEYIESATNRR
RSLLDAAEQSHQNINNHRTKKQPLDLC
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047219
(567 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2137261 - symbol:AT4G04180 species:3702 "Arabi... 1081 1.5e-162 2
WB|WBGene00004503 - symbol:rpt-3 species:6239 "Caenorhabd... 313 1.7e-27 1
CGD|CAL0005827 - symbol:RPT4 species:5476 "Candida albica... 314 2.6e-27 1
WB|WBGene00017981 - symbol:figl-1 species:6239 "Caenorhab... 312 3.6e-27 4
UNIPROTKB|O16299 - symbol:figl-1 "Fidgetin-like protein 1... 312 3.6e-27 4
TAIR|locus:2028200 - symbol:AT1G45000 species:3702 "Arabi... 310 3.6e-27 1
FB|FBgn0028868 - symbol:CG4701 species:7227 "Drosophila m... 308 6.0e-27 1
TAIR|locus:2161258 - symbol:RPT3 "regulatory particle tri... 308 6.0e-27 1
ZFIN|ZDB-GENE-030616-44 - symbol:atad1b "ATPase family, A... 307 7.7e-27 1
TAIR|locus:2159996 - symbol:RPT4A "regulatory particle tr... 306 1.0e-26 1
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 306 1.0e-26 1
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 306 1.0e-26 1
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 329 1.0e-26 1
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 329 1.0e-26 1
UNIPROTKB|Q60QD1 - symbol:figl-1 "Fidgetin-like protein 1... 324 1.1e-26 2
FB|FBgn0028686 - symbol:Rpt3 "Regulatory particle triple-... 305 1.3e-26 1
ZFIN|ZDB-GENE-030616-593 - symbol:atad1a "ATPase family, ... 304 1.7e-26 1
FB|FBgn0005322 - symbol:nmd "no mitochondrial derivative"... 303 2.2e-26 1
UNIPROTKB|Q9FXT8 - symbol:OsRPT4 "Os02g0199900 protein" s... 303 2.2e-26 1
CGD|CAL0001067 - symbol:orf19.4362 species:5476 "Candida ... 301 3.6e-26 1
RGD|1308570 - symbol:Atad1 "ATPase family, AAA domain con... 299 5.9e-26 1
TAIR|locus:2168646 - symbol:AT5G53540 species:3702 "Arabi... 299 5.9e-26 1
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 322 6.6e-26 1
UNIPROTKB|F6QV99 - symbol:ATAD1 "ATPase family AAA domain... 298 7.7e-26 1
UNIPROTKB|E2RHY1 - symbol:ATAD1 "Uncharacterized protein"... 298 7.7e-26 1
UNIPROTKB|Q8NBU5 - symbol:ATAD1 "ATPase family AAA domain... 298 7.7e-26 1
UNIPROTKB|F2Z5H2 - symbol:ATAD1 "Uncharacterized protein"... 298 7.7e-26 1
MGI|MGI:1915229 - symbol:Atad1 "ATPase family, AAA domain... 298 7.7e-26 1
GENEDB_PFALCIPARUM|PFD0665c - symbol:PFD0665c "26s protea... 297 9.9e-26 1
UNIPROTKB|Q8I1V1 - symbol:PFD0665c "26S proteasome AAA-AT... 297 9.9e-26 1
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 318 1.8e-25 1
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 318 1.8e-25 1
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 294 2.1e-25 1
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 316 3.0e-25 1
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div... 316 6.2e-25 1
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi... 316 6.2e-25 1
TAIR|locus:2137777 - symbol:AT4G27680 species:3702 "Arabi... 292 7.1e-25 1
SGD|S000003260 - symbol:MSP1 "Mitochondrial protein invol... 289 7.6e-25 1
UNIPROTKB|F1PX89 - symbol:ATAD1 "Uncharacterized protein"... 298 1.1e-24 1
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 287 1.2e-24 1
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 310 1.4e-24 1
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 310 1.4e-24 1
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 310 1.4e-24 1
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 310 1.4e-24 1
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 310 1.5e-24 1
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 310 1.5e-24 1
ZFIN|ZDB-GENE-030131-5083 - symbol:psmc4 "proteasome (pro... 297 1.5e-24 1
UNIPROTKB|F1NT80 - symbol:ATAD1 "Uncharacterized protein"... 286 1.6e-24 1
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 286 1.6e-24 1
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 309 1.8e-24 1
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 309 1.8e-24 1
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 309 1.8e-24 1
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 309 1.8e-24 1
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 309 1.8e-24 1
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 309 1.8e-24 1
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 309 1.8e-24 1
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 309 1.9e-24 1
RGD|1308825 - symbol:Psmc6 "proteasome (prosome, macropai... 285 2.1e-24 1
UNIPROTKB|F1MG70 - symbol:PSMC4 "26S protease regulatory ... 295 2.8e-24 1
UNIPROTKB|Q3T030 - symbol:PSMC4 "26S protease regulatory ... 295 3.0e-24 1
UNIPROTKB|E2RH48 - symbol:PSMC4 "Uncharacterized protein"... 295 3.0e-24 1
UNIPROTKB|P43686 - symbol:PSMC4 "26S protease regulatory ... 295 3.0e-24 1
UNIPROTKB|Q4R7L3 - symbol:PSMC4 "26S protease regulatory ... 295 3.0e-24 1
MGI|MGI:1346093 - symbol:Psmc4 "proteasome (prosome, macr... 295 3.0e-24 1
RGD|621102 - symbol:Psmc4 "proteasome (prosome, macropain... 295 3.0e-24 1
DICTYBASE|DDB_G0289003 - symbol:psmC4 "HIV TAT binding-pr... 291 3.6e-24 1
DICTYBASE|DDB_G0284517 - symbol:psmC6 "26S protease regul... 287 3.7e-24 1
UNIPROTKB|F1MLV1 - symbol:PSMC6 "26S protease regulatory ... 285 4.2e-24 1
UNIPROTKB|P62333 - symbol:PSMC6 "26S protease regulatory ... 285 4.2e-24 1
UNIPROTKB|P62335 - symbol:PSMC6 "26S protease regulatory ... 285 4.2e-24 1
MGI|MGI:1914339 - symbol:Psmc6 "proteasome (prosome, macr... 285 4.2e-24 1
SGD|S000005785 - symbol:RPT4 "ATPase of the 19S regulator... 296 4.5e-24 1
POMBASE|SPCC24B10.10c - symbol:yta4 "mitochondrial outer ... 281 5.7e-24 1
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 303 8.7e-24 1
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 302 1.1e-23 1
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 285 1.2e-23 1
DICTYBASE|DDB_G0276917 - symbol:psmC2 "26S proteasome ATP... 291 1.5e-23 1
UNIPROTKB|F1NCS8 - symbol:PSMC6 "Uncharacterized protein"... 287 1.6e-23 1
UNIPROTKB|J9P1N0 - symbol:PSMC6 "Uncharacterized protein"... 285 1.7e-23 1
CGD|CAL0001552 - symbol:PR26 species:5476 "Candida albica... 288 1.9e-23 1
UNIPROTKB|Q5A0L8 - symbol:PR26 "Likely 26S proteasome reg... 288 1.9e-23 1
UNIPROTKB|F1SFE6 - symbol:PSMC6 "Uncharacterized protein"... 285 3.3e-23 1
RGD|2318218 - symbol:LOC100365869 "proteasome (prosome, m... 285 3.3e-23 1
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 281 4.6e-23 1
ZFIN|ZDB-GENE-030131-304 - symbol:psmc6 "proteasome (pros... 281 4.6e-23 1
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 288 4.7e-23 1
TAIR|locus:2061639 - symbol:RPT2b "regulatory particle AA... 288 5.1e-23 1
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 296 5.2e-23 1
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 277 5.5e-23 2
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 277 5.5e-23 2
UNIPROTKB|F1LZ09 - symbol:F1LZ09 "Uncharacterized protein... 272 5.6e-23 1
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 287 6.2e-23 1
TAIR|locus:2119926 - symbol:RPT2a "regulatory particle AA... 287 6.6e-23 1
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 286 8.1e-23 1
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 286 8.2e-23 1
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 286 8.4e-23 1
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 286 8.4e-23 1
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 286 8.4e-23 1
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 286 8.4e-23 1
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 286 8.4e-23 1
WARNING: Descriptions of 580 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2137261 [details] [associations]
symbol:AT4G04180 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GO:GO:0017111 IPI:IPI00543933 RefSeq:NP_192327.3
UniGene:At.34057 ProteinModelPortal:F4JGS0 SMR:F4JGS0 PRIDE:F4JGS0
EnsemblPlants:AT4G04180.1 GeneID:825733 KEGG:ath:AT4G04180
OMA:SEMHEAT Uniprot:F4JGS0
Length = 609
Score = 1081 (385.6 bits), Expect = 1.5e-162, Sum P(2) = 1.5e-162
Identities = 227/336 (67%), Positives = 255/336 (75%)
Query: 240 KGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLS 299
+GS D +S L+ G RIYG+++P + S EISW+NIAGYDQQKREIEDTIL++
Sbjct: 279 RGSTRDSSTDKSISQLESMGVRIYGVNKPLGDDSMDEISWDNIAGYDQQKREIEDTILMA 338
Query: 300 LQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYV 359
L SPEVYDDI RGTR KFESNRPRAVLFEGPPGTGKTSCARVIANQAG +PL+YV
Sbjct: 339 LHSPEVYDDIVRGTRSKFESNRPRAVLFEGPPGTGKTSCARVIANQAG------IPLLYV 392
Query: 360 PLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVL 419
PLE VMSKYYGESERLLG VFS ANELP+GAIIFLDE+D+FA++RDSEMHEATRR+LSVL
Sbjct: 393 PLEAVMSKYYGESERLLGAVFSQANELPDGAIIFLDEIDAFAISRDSEMHEATRRVLSVL 452
Query: 420 LRQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXX 479
LRQIDGFEQ+KKVVVIAATNRKQDLDPALISRFDSMI F LPD + RQEI AQYAK
Sbjct: 453 LRQIDGFEQEKKVVVIAATNRKQDLDPALISRFDSMIMFDLPDLQTRQEIIAQYAKQLSK 512
Query: 480 XXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIR----GQITK----DGEQA--CLPPL 529
MSGRDIRDVCQ AER+WASKII GQ+ + GE+ LPP+
Sbjct: 513 PELVQLAQATEAMSGRDIRDVCQGAERTWASKIINLYIVGQLIRRAKAGGEEQKITLPPI 572
Query: 530 QEYIESATNRRRSLLDAAEQSHQNINNHRTKKQPLD 565
QEY+ESA RR+SL EQ Q R+KK LD
Sbjct: 573 QEYLESAEARRKSLRSVTEQKEQKFAA-RSKKPLLD 607
Score = 523 (189.2 bits), Expect = 1.5e-162, Sum P(2) = 1.5e-162
Identities = 125/277 (45%), Positives = 166/277 (59%)
Query: 1 MASLRRLAKTASVWR-VLTASRA-----SPRGQP-RRLPHRSLEQQIRFSASEIQRP-KL 52
MA L +L + + WR L+ S++ SPR + RR H +Q +++ R
Sbjct: 1 MAILDKLFRASRAWRGSLSHSKSMVPSQSPRARELRRCFHHGNFEQSNSKVNQVLRSCST 60
Query: 53 LDDTPGPSSIHPAILAGLFGVGALNIAYADGDQGAGTAKXXXXXXXXXXXXXX------- 105
L+D+P S+ PA+L LF VG + +AYA+ D+ A K
Sbjct: 61 LNDSPY-FSMAPAVLGALFSVGVIGVAYAESDE-ANNDKSSAPIDPNDETSSAPIDPPPN 118
Query: 106 -XXIAKKERQRIEELLKRKGMHYGSCPTFTVAVKGQKVTIKFQVPPACEIPQLIANLVSH 164
IAKKER R+EEL++ KG YGS P F VAV+GQK+T+KFQVP CE+ QLI+N+ S
Sbjct: 119 YVDIAKKERARVEELIQSKGTQYGSYPRFNVAVRGQKITLKFQVPSTCEVAQLISNIGSQ 178
Query: 165 LGLKVEEHGGGSDMGLRAWDSAVAWQLTLKPPEKQNESGGDRAQSGDMNAREGDLCILIF 224
LG+KV + GGSDM LRAWD+ VAWQ+TL+ E + + G S D DLCILIF
Sbjct: 179 LGVKVSDRTGGSDMLLRAWDNPVAWQITLRSVENKKKLGESEDDSDD------DLCILIF 232
Query: 225 RSLITSDKPEIEFIKKGSLTSEELDALVSVLQLAGRR 261
SL+TSDK E+EFIKKGSLT+EEL+A VS L +AG +
Sbjct: 233 GSLLTSDKVEVEFIKKGSLTTEELEAFVSALGVAGTK 269
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 313 (115.2 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 103/300 (34%), Positives = 142/300 (47%)
Query: 236 EFIKKG-SLTSEEL-DALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIE 293
E +K G S+ + +ALV VL + P K +IS+ +I G D QK+E+
Sbjct: 118 ELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPD---EKPDISYGDIGGLDMQKQEVR 174
Query: 294 DTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIA-NQAGAMPWQ 352
+ + L L E+Y I + PR VL GPPG GKT A+ +A N A +
Sbjct: 175 EAVELPLTHGELYQQIG--------IDPPRGVLMYGPPGCGKTMLAKAVAANTAASF--- 223
Query: 353 GVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEAT 412
+ V E V KY GE R++ VF LA E + +IIF+DE+D+ A R A
Sbjct: 224 ---IRVVGSEFVQ-KYLGEGPRMVRDVFRLAKE-NSPSIIFIDEIDAIATKRFDAQTGAD 278
Query: 413 R---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQ 467
R RIL LL Q+DGF+Q V VI ATNR+ LDPAL+ R D I F LPD ++
Sbjct: 279 REVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKR 338
Query: 468 EIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQAERSWASKIIRGQITKDGEQA 524
+ + +SG DI +CQ+A + +TKD E+A
Sbjct: 339 LVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKA 398
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 314 (115.6 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 95/278 (34%), Positives = 137/278 (49%)
Query: 236 EFIKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDT 295
E +K G S ++ L +++++ R + L EIS+ I G +Q RE+ +
Sbjct: 129 ENLKNGVRVSLDMTTL-TIMRILPREVDPLVYNMTTFEPGEISFNGIGGLTEQIRELREV 187
Query: 296 ILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVP 355
I L L++PE++ TR + P+ VL GPPGTGKT A+ +A GA
Sbjct: 188 IELPLKNPELF------TRVGIKP--PKGVLLYGPPGTGKTLLAKAVAATIGAN------ 233
Query: 356 LMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI 415
++ P ++ KY GES RL+ ++F+ A E IIF+DEVD+ R SE A R I
Sbjct: 234 FIFSPASAIVDKYIGESARLIREMFAYAKE-HEPCIIFMDEVDAIGGRRFSEGTSADREI 292
Query: 416 ---LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI- 469
L LL Q+DGF+ + +I ATNR LDPAL+ R D I GLP+ R EI
Sbjct: 293 QRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAGRLEIF 352
Query: 470 ---AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
++ AK +G DIR+V +A
Sbjct: 353 KIHTSKVAKQGEFDFEAAVKMSDG-FNGADIRNVVTEA 389
>WB|WBGene00017981 [details] [associations]
symbol:figl-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045931
"positive regulation of mitotic cell cycle" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0000287
GO:GO:0045931 GO:GO:0016887 eggNOG:COG0464 HSSP:O75351
HOGENOM:HOG000112588 OMA:HFDENII EMBL:FO081012 PIR:T03922
RefSeq:NP_504197.1 ProteinModelPortal:O16299 SMR:O16299
DIP:DIP-25869N IntAct:O16299 MINT:MINT-117972 STRING:O16299
PaxDb:O16299 PRIDE:O16299 EnsemblMetazoa:F32D1.1 GeneID:178829
KEGG:cel:CELE_F32D1.1 UCSC:F32D1.1 CTD:178829 WormBase:F32D1.1
GeneTree:ENSGT00570000078874 InParanoid:O16299 NextBio:902732
Uniprot:O16299
Length = 594
Score = 312 (114.9 bits), Expect = 3.6e-27, Sum P(4) = 3.6e-27
Identities = 80/250 (32%), Positives = 129/250 (51%)
Query: 262 IYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNR 321
I L E ++ + +EI W ++AG + K+ + + ++L + P+V+ G R
Sbjct: 298 IISLIESEIMSVNNEIGWADVAGLEGAKKALREIVVLPFKRPDVFT----GIRAP----- 348
Query: 322 PRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFS 381
P+ VL GPPGTGKT R +A+Q A + + SK+ GE E+L+ +FS
Sbjct: 349 PKGVLLFGPPGTGKTMIGRCVASQCKAT------FFNISASSLTSKWVGEGEKLVRALFS 402
Query: 382 LAN-ELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQ--DKKVVVIAAT 438
+A +LP+ +IF+DE+DS +R HE++RRI + L Q+DG D++++V+ AT
Sbjct: 403 VARLKLPS--VIFIDEIDSLLSSRSESEHESSRRIKTEFLVQLDGVNTAPDERLLVLGAT 460
Query: 439 NRKQDLDPALISRFDSMITFGLPDHENRQEIAAQY---AKHXXXXXXXXXXXXXXX-MSG 494
NR Q+LD A RF + LP+ E+R +I +H SG
Sbjct: 461 NRPQELDEAARRRFQKRLYIALPEPESRTQIVQNLLVGTRHDITNHNLERIRELTDGYSG 520
Query: 495 RDIRDVCQQA 504
D+R +C +A
Sbjct: 521 ADMRQLCTEA 530
Score = 48 (22.0 bits), Expect = 3.6e-27, Sum P(4) = 3.6e-27
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 148 VPPAC---EIPQLIANLVSHLGLKVEEHGGGSD---MGLRA 182
+PPA +IP+ +N + + ++ GGG D GLRA
Sbjct: 247 IPPARRAPDIPKRCSNPLIRKAMGMDTEGGGKDEKMSGLRA 287
Score = 41 (19.5 bits), Expect = 3.6e-27, Sum P(4) = 3.6e-27
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 131 PTFTVAVKGQKVTIKFQVP 149
P+FT A KFQVP
Sbjct: 213 PSFTTAAGQDPQNSKFQVP 231
Score = 38 (18.4 bits), Expect = 3.6e-27, Sum P(4) = 3.6e-27
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 111 KERQRIEELLKRKGMHYGS 129
KE +R EE +G +GS
Sbjct: 126 KEEKRREEPFTMRGFDFGS 144
>UNIPROTKB|O16299 [details] [associations]
symbol:figl-1 "Fidgetin-like protein 1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0046034 "ATP metabolic process" evidence=IDA]
[GO:0016787 "hydrolase activity" evidence=IDA] [GO:0000287
"magnesium ion binding" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0000287 GO:GO:0045931 GO:GO:0016887
eggNOG:COG0464 HSSP:O75351 HOGENOM:HOG000112588 OMA:HFDENII
EMBL:FO081012 PIR:T03922 RefSeq:NP_504197.1
ProteinModelPortal:O16299 SMR:O16299 DIP:DIP-25869N IntAct:O16299
MINT:MINT-117972 STRING:O16299 PaxDb:O16299 PRIDE:O16299
EnsemblMetazoa:F32D1.1 GeneID:178829 KEGG:cel:CELE_F32D1.1
UCSC:F32D1.1 CTD:178829 WormBase:F32D1.1
GeneTree:ENSGT00570000078874 InParanoid:O16299 NextBio:902732
Uniprot:O16299
Length = 594
Score = 312 (114.9 bits), Expect = 3.6e-27, Sum P(4) = 3.6e-27
Identities = 80/250 (32%), Positives = 129/250 (51%)
Query: 262 IYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNR 321
I L E ++ + +EI W ++AG + K+ + + ++L + P+V+ G R
Sbjct: 298 IISLIESEIMSVNNEIGWADVAGLEGAKKALREIVVLPFKRPDVFT----GIRAP----- 348
Query: 322 PRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFS 381
P+ VL GPPGTGKT R +A+Q A + + SK+ GE E+L+ +FS
Sbjct: 349 PKGVLLFGPPGTGKTMIGRCVASQCKAT------FFNISASSLTSKWVGEGEKLVRALFS 402
Query: 382 LAN-ELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQ--DKKVVVIAAT 438
+A +LP+ +IF+DE+DS +R HE++RRI + L Q+DG D++++V+ AT
Sbjct: 403 VARLKLPS--VIFIDEIDSLLSSRSESEHESSRRIKTEFLVQLDGVNTAPDERLLVLGAT 460
Query: 439 NRKQDLDPALISRFDSMITFGLPDHENRQEIAAQY---AKHXXXXXXXXXXXXXXX-MSG 494
NR Q+LD A RF + LP+ E+R +I +H SG
Sbjct: 461 NRPQELDEAARRRFQKRLYIALPEPESRTQIVQNLLVGTRHDITNHNLERIRELTDGYSG 520
Query: 495 RDIRDVCQQA 504
D+R +C +A
Sbjct: 521 ADMRQLCTEA 530
Score = 48 (22.0 bits), Expect = 3.6e-27, Sum P(4) = 3.6e-27
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 148 VPPAC---EIPQLIANLVSHLGLKVEEHGGGSD---MGLRA 182
+PPA +IP+ +N + + ++ GGG D GLRA
Sbjct: 247 IPPARRAPDIPKRCSNPLIRKAMGMDTEGGGKDEKMSGLRA 287
Score = 41 (19.5 bits), Expect = 3.6e-27, Sum P(4) = 3.6e-27
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 131 PTFTVAVKGQKVTIKFQVP 149
P+FT A KFQVP
Sbjct: 213 PSFTTAAGQDPQNSKFQVP 231
Score = 38 (18.4 bits), Expect = 3.6e-27, Sum P(4) = 3.6e-27
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 111 KERQRIEELLKRKGMHYGS 129
KE +R EE +G +GS
Sbjct: 126 KEEKRREEPFTMRGFDFGS 144
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 310 (114.2 bits), Expect = 3.6e-27, P = 3.6e-27
Identities = 96/280 (34%), Positives = 140/280 (50%)
Query: 238 IKKGSLTSEE---LD-ALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIE 293
+ K LTS LD +++++ R + + L+ IS+ + G Q RE+
Sbjct: 93 VDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELR 152
Query: 294 DTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQG 353
++I L L +PE++ + G + P+ VL GPPGTGKT AR IA+ A
Sbjct: 153 ESIELPLMNPELF--LRVGIK------PPKGVLLYGPPGTGKTLLARAIASNIDAN---- 200
Query: 354 VPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR 413
+ V ++ KY GES RL+ ++F+ A E IIF+DE+D+ R SE A R
Sbjct: 201 --FLKVVSSAIIDKYIGESARLIREMFNYARE-HQPCIIFMDEIDAIGGRRFSEGTSADR 257
Query: 414 RI---LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQE 468
I L LL Q+DGF+Q KV +I ATNR LDPAL+ R D I LP+ ++R E
Sbjct: 258 EIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRME 317
Query: 469 I----AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
I A+ AKH +G D+R++C +A
Sbjct: 318 ILKIHASGIAKHGEIDYEAIVKLGEG-FNGADLRNICTEA 356
>FB|FBgn0028868 [details] [associations]
symbol:CG4701 species:7227 "Drosophila melanogaster"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005741 "mitochondrial
outer membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005741 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 EMBL:AY113316 ProteinModelPortal:Q8MZ76 SMR:Q8MZ76
STRING:Q8MZ76 PaxDb:Q8MZ76 PRIDE:Q8MZ76 FlyBase:FBgn0028868
InParanoid:Q8MZ76 OrthoDB:EOG49W0X0 ChiTaRS:CG4701
ArrayExpress:Q8MZ76 Bgee:Q8MZ76 Uniprot:Q8MZ76
Length = 384
Score = 308 (113.5 bits), Expect = 6.0e-27, P = 6.0e-27
Identities = 82/253 (32%), Positives = 133/253 (52%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+ISW +IAG D +E+ +T++L ++ +++ +R K P+ VL GPPG GK
Sbjct: 91 DISWSDIAGLDGTIQELRETVVLPVRHRKLF------SRSKLW-RAPKGVLLHGPPGCGK 143
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IA AG + + + + V+ K+YGES++L VF+LA +L IIF+D
Sbjct: 144 TLIAKAIAKDAG------MRFINLDVGVLTDKWYGESQKLATAVFTLAKKL-QPCIIFID 196
Query: 396 EVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKK--VVVIAATNRKQDLDPALISRFD 453
E++SF R S HEAT I + + Q DG + V+V+ ATNR QDLD A++ R
Sbjct: 197 EIESFLRMRGSNDHEATAMIKTQFMLQWDGLMSNTNICVLVLGATNRPQDLDKAILRRMP 256
Query: 454 SMITFGLP-DHENRQ--EIAAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWAS 510
+ G+P D + R+ ++ Q + SG D+R++C+ A
Sbjct: 257 AQFHIGVPRDCQRREILQLILQTEQLSPSVNLKELARLTIGFSGSDLRELCRHASMYRMR 316
Query: 511 KIIRGQITKDGEQ 523
+ +R ++ GE+
Sbjct: 317 QFMREKLNT-GEE 328
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 308 (113.5 bits), Expect = 6.0e-27, P = 6.0e-27
Identities = 91/242 (37%), Positives = 119/242 (49%)
Query: 272 TSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPP 331
+ K ++S+ +I G D QK+EI + + L L E+Y I + PR VL GPP
Sbjct: 147 SEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIG--------IDPPRGVLLYGPP 198
Query: 332 GTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNG-A 390
GTGKT A+ +AN A + V E V KY GE R++ VF LA E N A
Sbjct: 199 GTGKTMLAKAVANHTTA-----AFIRVVGSEFVQ-KYLGEGPRMVRDVFRLAKE--NAPA 250
Query: 391 IIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPA 447
IIF+DEVD+ A AR A R RIL LL Q+DGF+Q V VI ATNR LDPA
Sbjct: 251 IIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPA 310
Query: 448 LI--SRFDSMITFGLPDHENRQ---EIAAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQ 502
L+ R D I F LPD ++ ++ +S +I +CQ
Sbjct: 311 LLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQ 370
Query: 503 QA 504
+A
Sbjct: 371 EA 372
>ZFIN|ZDB-GENE-030616-44 [details] [associations]
symbol:atad1b "ATPase family, AAA domain containing
1b" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-030616-44 GO:GO:0005886 GO:GO:0005524 GO:GO:0005777
GO:GO:0030054 GO:GO:0045211 GO:GO:0006200 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000225141 HOVERGEN:HBG057074
OrthoDB:EOG412M5T GeneTree:ENSGT00550000074823 EMBL:BC095151
EMBL:AL731788 IPI:IPI00487088 RefSeq:NP_001019592.1
UniGene:Dr.78224 ProteinModelPortal:Q503W7 STRING:Q503W7
Ensembl:ENSDART00000079130 Ensembl:ENSDART00000140927 GeneID:368412
KEGG:dre:368412 CTD:368412 OMA:YQVGIAD NextBio:20812908 Bgee:Q503W7
Uniprot:Q503W7
Length = 362
Score = 307 (113.1 bits), Expect = 7.7e-27, P = 7.7e-27
Identities = 85/273 (31%), Positives = 143/273 (52%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+I+W +IAG D+ E++DT++L +Q +++ G+R P+ VL GPPG GK
Sbjct: 91 QITWHDIAGLDEVITELKDTVILPIQKRHLFE----GSRLL---QPPKGVLLYGPPGCGK 143
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ A +AG ++ + L P + K+YGES++L VFSLA +L +IIF+D
Sbjct: 144 TLIAKATAKEAG---FRFINLQ--P-STLTDKWYGESQKLAAAVFSLAIKL-QPSIIFID 196
Query: 396 EVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK--KVVVIAATNRKQDLDPALISRFD 453
E+DSF R S HEAT + + + DG + D +V+++ ATNR QDLD A++ R
Sbjct: 197 EIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILRRMP 256
Query: 454 SMITFGLPDHENRQEIAAQYAKHXXXXXX---XXXXXXXXXMSGRDIRDVCQQAERSWAS 510
+ P+ R++I ++ SG D+R++C+ A A
Sbjct: 257 TRFHINQPNVRQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDA----AL 312
Query: 511 KIIRGQITKDG-EQACLPPL-QEYIESATNRRR 541
+R + ++ E+ + P+ QE ++ A + +
Sbjct: 313 LCVRDFVHQESPEEDFIRPIRQEDLQRAIEKMK 345
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 306 (112.8 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 95/280 (33%), Positives = 139/280 (49%)
Query: 238 IKKGSLTSEE---LD-ALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIE 293
+ K LTS LD +++++ R + + L+ IS+ + G Q RE+
Sbjct: 93 VDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELR 152
Query: 294 DTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQG 353
++I L L +PE++ + G + P+ VL GPPGTGKT AR IA+ A
Sbjct: 153 ESIELPLMNPELF--LRVGIK------PPKGVLLYGPPGTGKTLLARAIASNIDAN---- 200
Query: 354 VPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR 413
+ V ++ KY GES RL+ ++F+ A E IIF+DE+D+ R SE A R
Sbjct: 201 --FLKVVSSAIIDKYIGESARLIREMFNYARE-HQPCIIFMDEIDAIGGRRFSEGTSADR 257
Query: 414 RI---LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQE 468
I L LL Q+DGF+ KV +I ATNR LDPAL+ R D I LP+ ++R +
Sbjct: 258 EIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMD 317
Query: 469 I----AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
I AA AKH +G D+R++C +A
Sbjct: 318 ILKIHAAGIAKHGEIDYEAIVKLAEG-FNGADLRNICTEA 356
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 306 (112.8 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 90/278 (32%), Positives = 136/278 (48%)
Query: 236 EFIKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDT 295
E +K+G+ S ++ L + QL R + L + IS+ ++ G +Q RE+ +
Sbjct: 107 EELKQGTRVSLDMTTLTIMRQLP-REVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREV 165
Query: 296 ILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVP 355
+ L L +PE++ + P+ L GPPGTGKT AR +A+Q
Sbjct: 166 VELPLINPELFKRVG--------ITPPKGCLLFGPPGTGKTLLARAVASQLDCN------ 211
Query: 356 LMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI 415
+ V ++ KY GES R++ ++F+ A + I+F+DE+D+ R SE A R I
Sbjct: 212 FLKVVSSAIVDKYIGESARMIREMFNYARD-HQPCIVFMDEIDAIGGRRFSEGTSADREI 270
Query: 416 ---LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI- 469
L LL Q+DGF+ KV VI ATNR LDPAL+ R D I GLP+ ++R EI
Sbjct: 271 QRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEIL 330
Query: 470 ---AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
+ + KH S D+R+VC +A
Sbjct: 331 KIHSNKITKHGEIDFEAVVKLSDG-FSAADLRNVCTEA 367
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 306 (112.8 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 90/278 (32%), Positives = 136/278 (48%)
Query: 236 EFIKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDT 295
E +K+G+ S ++ L + QL R + L + IS+ ++ G +Q RE+ +
Sbjct: 107 EELKQGTRVSLDMTTLTIMRQLP-REVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREV 165
Query: 296 ILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVP 355
+ L L +PE++ + P+ L GPPGTGKT AR +A+Q
Sbjct: 166 VELPLINPELFKRVG--------ITPPKGCLLFGPPGTGKTLLARAVASQLDCN------ 211
Query: 356 LMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI 415
+ V ++ KY GES R++ ++F+ A + I+F+DE+D+ R SE A R I
Sbjct: 212 FLKVVSSAIVDKYIGESARMIREMFNYARD-HQPCIVFMDEIDAIGGRRFSEGTSADREI 270
Query: 416 ---LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI- 469
L LL Q+DGF+ KV VI ATNR LDPAL+ R D I GLP+ ++R EI
Sbjct: 271 QRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEIL 330
Query: 470 ---AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
+ + KH S D+R+VC +A
Sbjct: 331 KIHSNKITKHGEIDFEAVVKLSDG-FSAADLRNVCTEA 367
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 329 (120.9 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 88/237 (37%), Positives = 124/237 (52%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S +E+ +++I G +Q +I + + L L+ P+++ I G + P+ +L GPPG
Sbjct: 208 SLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSI--GIK------PPKGILMYGPPG 259
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ GA + L+ P +MSK GESE L K F A E + +II
Sbjct: 260 TGKTIMARAVANETGAFFF----LINGP--EIMSKMAGESESNLRKAFEEA-EKNSPSII 312
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--IS 450
F+DE+DS A RD E RR++S LL +DG + VVVIAATNR +DPAL
Sbjct: 313 FIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFG 372
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXX---XXXXXXXXMSGRDIRDVCQQA 504
RFD + G+PD E R EI + K+ G DI +C +A
Sbjct: 373 RFDREVDIGVPDAEGRLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEA 429
Score = 266 (98.7 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 80/248 (32%), Positives = 125/248 (50%)
Query: 231 DKPEIEFIKKGSLTSEELDALVSVLQLAGRRIYGLDEPQ-LNTSKSE---ISWENIAGYD 286
+K ++ +++ ++ +E L++L V Q R G P L + E ++W++I G D
Sbjct: 436 EKMDLIDLEEETIDTEVLNSL-GVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLD 494
Query: 287 QQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQA 346
K E+++T+ + P+ Y KF + VLF GPPGTGKT A+ +A +
Sbjct: 495 NIKNELKETVEYPVLHPDQYQ--------KFGLAPTKGVLFFGPPGTGKTLLAKAVATEV 546
Query: 347 GAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDS 406
A + V ++S +YGESE + +F A ++FLDE+DS A AR
Sbjct: 547 SAN------FISVKGPELLSMWYGESESNIRDIFDKARAAAP-TVVFLDELDSIAKARGG 599
Query: 407 EMHEA---TRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLP 461
+A + R+++ LL ++DG K V VI ATNR +DPAL+ R D +I LP
Sbjct: 600 SHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLP 659
Query: 462 DHENRQEI 469
D R I
Sbjct: 660 DEPARLSI 667
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 329 (120.9 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 88/237 (37%), Positives = 124/237 (52%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S +E+ +++I G +Q +I + + L L+ P+++ I G + P+ +L GPPG
Sbjct: 208 SLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSI--GIK------PPKGILMYGPPG 259
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ GA + L+ P +MSK GESE L K F A E + +II
Sbjct: 260 TGKTIMARAVANETGAFFF----LINGP--EIMSKMAGESESNLRKAFEEA-EKNSPSII 312
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--IS 450
F+DE+DS A RD E RR++S LL +DG + VVVIAATNR +DPAL
Sbjct: 313 FIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFG 372
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXX---XXXXXXXXMSGRDIRDVCQQA 504
RFD + G+PD E R EI + K+ G DI +C +A
Sbjct: 373 RFDREVDIGVPDAEGRLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEA 429
Score = 266 (98.7 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 80/248 (32%), Positives = 125/248 (50%)
Query: 231 DKPEIEFIKKGSLTSEELDALVSVLQLAGRRIYGLDEPQ-LNTSKSE---ISWENIAGYD 286
+K ++ +++ ++ +E L++L V Q R G P L + E ++W++I G D
Sbjct: 436 EKMDLIDLEEETIDTEVLNSL-GVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLD 494
Query: 287 QQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQA 346
K E+++T+ + P+ Y KF + VLF GPPGTGKT A+ +A +
Sbjct: 495 NIKNELKETVEYPVLHPDQYQ--------KFGLAPTKGVLFFGPPGTGKTLLAKAVATEV 546
Query: 347 GAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDS 406
A + V ++S +YGESE + +F A ++FLDE+DS A AR
Sbjct: 547 SAN------FISVKGPELLSMWYGESESNIRDIFDKARAAAP-TVVFLDELDSIAKARGG 599
Query: 407 EMHEA---TRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLP 461
+A + R+++ LL ++DG K V VI ATNR +DPAL+ R D +I LP
Sbjct: 600 SHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLP 659
Query: 462 DHENRQEI 469
D R I
Sbjct: 660 DEPARLSI 667
>UNIPROTKB|Q60QD1 [details] [associations]
symbol:figl-1 "Fidgetin-like protein 1" species:6238
"Caenorhabditis briggsae" [GO:0000287 "magnesium ion binding"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=ISS]
[GO:0046034 "ATP metabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0000287
GO:GO:0016787 eggNOG:COG0464 GO:GO:0017111 HSSP:O75351
GO:GO:0046034 EMBL:HE601531 RefSeq:XP_002635669.1
ProteinModelPortal:Q60QD1 PRIDE:Q60QD1 EnsemblMetazoa:CBG21866
GeneID:8577664 KEGG:cbr:CBG21866 CTD:8577664 WormBase:CBG21866
HOGENOM:HOG000112588 OMA:HFDENII Uniprot:Q60QD1
Length = 591
Score = 324 (119.1 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 86/273 (31%), Positives = 139/273 (50%)
Query: 241 GSLTSEELDALVS--VLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILL 298
G E +D L S L+ I L E ++ + ++I W ++AG + K+ +++ ++L
Sbjct: 275 GGGKDERMDGLRSEPTLKHFDENIISLIESEIMSVNNQIGWADVAGLEGAKKALKEIVVL 334
Query: 299 SLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMY 358
Q P+++ G R P+ VL GPPGTGKT R +A+QA A
Sbjct: 335 PFQRPDIFT----GLRAP-----PKGVLLFGPPGTGKTMIGRCVASQAQAT------FFN 379
Query: 359 VPLEVVMSKYYGESERLLGKVFSLAN-ELPNGAIIFLDEVDSFAVARDSEMHEATRRILS 417
+ + SK+ GE E+L+ +FS+A +LP+ +IF+DE+DS AR HE++RRI +
Sbjct: 380 ISASSLTSKWVGEGEKLVRALFSVARLKLPS--VIFIDEIDSLLSARSESEHESSRRIKT 437
Query: 418 VLLRQIDGFEQ--DKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQY-- 473
L Q+DG D++++V+ ATNR Q+LD A RF + LP+ ++R +I
Sbjct: 438 EFLVQLDGVNTAPDERLLVLGATNRPQELDEAARRRFQKRLYIALPEPDSRTQIVENLLR 497
Query: 474 -AKHXXXXXXXXXXXXXXX-MSGRDIRDVCQQA 504
+H SG D+R +C +A
Sbjct: 498 GTRHEITDHNLEKIRRLTDGYSGADMRQLCTEA 530
Score = 41 (19.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 153 EIPQLIANLVSHLGLKVEEHGGGSDM---GLRA 182
EIP+ +N + + ++ GGG D GLR+
Sbjct: 255 EIPRRCSNSLVKKAMGMDTDGGGKDERMDGLRS 287
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 305 (112.4 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 101/291 (34%), Positives = 137/291 (47%)
Query: 225 RSLITSDKPEIEFIKKGSLTS--EELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENI 282
R L T D+ E +K + + + +ALV VL + +P K ++S+ +I
Sbjct: 109 RILSTIDR---ELLKPSASVALHKHSNALVDVLPPEADSSISMLQPD---EKPDVSYADI 162
Query: 283 AGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVI 342
G D QK+EI + + L L E+Y I + PR VL GPPG GKT A+ +
Sbjct: 163 GGMDMQKQEIREAVELPLTHFELYKQIG--------IDPPRGVLMYGPPGCGKTMLAKAV 214
Query: 343 ANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNG-AIIFLDEVDSFA 401
A+ A + V E V KY GE R++ VF LA E N AIIF+DE+D+ A
Sbjct: 215 AHHTTASF-----IRVVGSEFVQ-KYLGEGPRMVRDVFRLAKE--NAPAIIFIDEIDAIA 266
Query: 402 VARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMI 456
R A R RIL LL Q+DGF+Q V VI ATNR LDPAL+ R D I
Sbjct: 267 TKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKI 326
Query: 457 TFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
F LPD ++ + + +SG DI +CQ+A
Sbjct: 327 EFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEA 377
>ZFIN|ZDB-GENE-030616-593 [details] [associations]
symbol:atad1a "ATPase family, AAA domain containing
1a" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-030616-593 GO:GO:0005886 GO:GO:0005524 GO:GO:0005777
GO:GO:0030054 GO:GO:0045211 GO:GO:0006200 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000225141 HOVERGEN:HBG057074
GeneTree:ENSGT00550000074823 EMBL:AL772163 EMBL:BC081379
IPI:IPI00499109 IPI:IPI00508202 RefSeq:NP_001004640.1
UniGene:Dr.104656 ProteinModelPortal:Q7ZZ25 STRING:Q7ZZ25
Ensembl:ENSDART00000035859 GeneID:368672 KEGG:dre:368672 CTD:368672
InParanoid:Q7ZZ25 OrthoDB:EOG4VHK6P NextBio:20813106 Bgee:Q7ZZ25
Uniprot:Q7ZZ25
Length = 380
Score = 304 (112.1 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 83/276 (30%), Positives = 136/276 (49%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++W ++AG D+ E++DT++L Q ++ G++ P+ VL GPPG GK
Sbjct: 90 KVTWRDVAGLDEIISEMQDTVILPFQKRHLFS----GSKLL---QPPKGVLLYGPPGCGK 142
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ A +G + + + K+YGES++L VFSLA ++ IIFLD
Sbjct: 143 TLIAKATAKASGCR------FINLQASTLTDKWYGESQKLTAAVFSLAVKI-QPCIIFLD 195
Query: 396 EVDSFAVARDSEMHEATRRILSVLLRQIDGFE--QDKKVVVIAATNRKQDLDPALISRFD 453
E+DSF R S HEAT + + + DG + ++ +V+V+ ATNR QD+D A++ R
Sbjct: 196 EIDSFLRNRSSMDHEATAMMKAQFMSLWDGLDTGENSQVMVMGATNRPQDVDAAILRRMP 255
Query: 454 SMITFGLPDHENRQEIAAQYAKHXXXXXXXXX---XXXXXXMSGRDIRDVCQQAERSWAS 510
+ GLP+ R+EI SG D++++C+ A
Sbjct: 256 TAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAAMYRVR 315
Query: 511 KIIRGQITKD-GEQACLPPLQEYIESATNRRRSLLD 545
+R Q K +Q L +E+++S R + LD
Sbjct: 316 DYVRKQQMKQIAQQFQLDEEEEHVDSRQLRPVTQLD 351
>FB|FBgn0005322 [details] [associations]
symbol:nmd "no mitochondrial derivative" species:7227
"Drosophila melanogaster" [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0007286 "spermatid development" evidence=TAS] [GO:0005741
"mitochondrial outer membrane" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048190 "wing disc dorsal/ventral
pattern formation" evidence=IGI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0048190 EMBL:AE014134
GO:GO:0005741 GO:GO:0007286 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 GeneTree:ENSGT00550000074823 EMBL:AY119493
RefSeq:NP_609373.1 UniGene:Dm.11450 SMR:Q9VL02 IntAct:Q9VL02
MINT:MINT-282656 STRING:Q9VL02 EnsemblMetazoa:FBtr0080065
GeneID:44021 KEGG:dme:Dmel_CG5395 UCSC:CG5395-RA CTD:44021
FlyBase:FBgn0005322 InParanoid:Q9VL02 OMA:EMCRNAS OrthoDB:EOG4PG4GP
GenomeRNAi:44021 NextBio:836621 Uniprot:Q9VL02
Length = 369
Score = 303 (111.7 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 74/233 (31%), Positives = 125/233 (53%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+SW +IAG D +E+ ++++L +Q + D+ + ++ +++ P+ VL GPPG GKT
Sbjct: 94 VSWADIAGLDSVIQELRESVVLPIQ----HKDLFKHSKL-WQA--PKGVLLHGPPGCGKT 146
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ A +AG + + + + ++ K+YGES++L VFSLA+ + IIF+DE
Sbjct: 147 LIAKATAKEAG------MRFINLDVAILTDKWYGESQKLTSAVFSLASRI-EPCIIFIDE 199
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKK--VVVIAATNRKQDLDPALISRFDS 454
+DSF +R+ HEAT + + + DG + V+V+ ATNR QDLD A++ R +
Sbjct: 200 IDSFLRSRNMNDHEATAMMKTQFMMLWDGLSTNANSTVIVMGATNRPQDLDKAIVRRMPA 259
Query: 455 MITFGLPDHENRQEIAA---QYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
GLP R++I Q + SG D+R++C+ A
Sbjct: 260 QFHIGLPSETQRKDILKLILQSEEVSQDVDLNRLSKLTNGFSGSDLREMCRNA 312
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 303 (111.7 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 93/280 (33%), Positives = 138/280 (49%)
Query: 238 IKKGSLTSEE---LD-ALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIE 293
+ K LTS LD +++++ R + + L+ +S+ + G Q RE+
Sbjct: 94 VDKEKLTSGTRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELR 153
Query: 294 DTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQG 353
++I L L +PE++ + G + P+ VL GPPGTGKT AR IA+ A
Sbjct: 154 ESIELPLMNPELF--LRVGIK------PPKGVLLYGPPGTGKTLLARAIASNIDAN---- 201
Query: 354 VPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR 413
+ + ++ KY GES RL+ ++F A + IIF+DE+D+ R SE A R
Sbjct: 202 --FLKIVSSAIIDKYIGESARLIREMFGYARD-HQPCIIFMDEIDAIGGRRFSEGTSADR 258
Query: 414 RI---LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQE 468
I L LL Q+DGF++ KV +I ATNR LDPAL+ R D I LP+ + R E
Sbjct: 259 EIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQARME 318
Query: 469 I----AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
+ AA AKH +G D+R+VC +A
Sbjct: 319 VLKIHAAGIAKHGEIDYEAVVKLAEG-FNGADLRNVCTEA 357
>CGD|CAL0001067 [details] [associations]
symbol:orf19.4362 species:5476 "Candida albicans" [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006626 "protein
targeting to mitochondrion" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0001067 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000225141 EMBL:AACQ01000091
EMBL:AACQ01000090 RefSeq:XP_715087.1 RefSeq:XP_715138.1
ProteinModelPortal:Q5A026 GeneID:3643190 GeneID:3643254
KEGG:cal:CaO19.11840 KEGG:cal:CaO19.4362 Uniprot:Q5A026
Length = 369
Score = 301 (111.0 bits), Expect = 3.6e-26, P = 3.6e-26
Identities = 71/232 (30%), Positives = 118/232 (50%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+++++I G E+ + ++L L PE++ A + + P+ VLF GPPG GKT
Sbjct: 95 VTFDDIGGLSDIIDELREAVILPLTEPELF--AAHSSLIQ----SPKGVLFYGPPGCGKT 148
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ IA ++GA + + + +M K+YGES ++ +FSLAN+L IIF+DE
Sbjct: 149 MLAKAIAKESGAF------FLSIRMSSIMDKWYGESNKITDAIFSLANKL-QPCIIFIDE 201
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMI 456
+DSF R S HE + + + + DG + + +++V+ ATNRK D+D A + R
Sbjct: 202 IDSFLRDRSSNDHEVSAMLKAEFMTLWDGLKSNGQIMVLGATNRKNDIDEAFLRRMPKTF 261
Query: 457 TFGLPDHENRQEIAAQYAKHXXXXXXXXXX----XXXXXMSGRDIRDVCQQA 504
G P+ R I + K SG D+R++C++A
Sbjct: 262 AIGKPNASQRTAILNKILKDAKLDENDFDLEYIVANTRGFSGSDLRELCREA 313
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 42/169 (24%), Positives = 73/169 (43%)
Query: 391 IIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALIS 450
IIF+DE+DSF R S HE + + + + DG + + +++V+ ATNRK D+D A +
Sbjct: 196 IIFIDEIDSFLRDRSSNDHEVSAMLKAEFMTLWDGLKSNGQIMVLGATNRKNDIDEAFLR 255
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWAS 510
R G P+ R I + K D+ + R ++
Sbjct: 256 RMPKTFAIGKPNASQRTAILNKILKDAKLDENDF-----------DLEYIVANT-RGFSG 303
Query: 511 KIIRGQITKDGEQACLPPLQEYIESATNRRRSLLDAAEQSHQNINNHRT 559
+R ++ ++ A + P++EYI+ N + L E + RT
Sbjct: 304 SDLR-ELCRE---AAILPVREYIKENYNYKSGKLSRDENDDLPVRPLRT 348
>RGD|1308570 [details] [associations]
symbol:Atad1 "ATPase family, AAA domain containing 1"
species:10116 "Rattus norvegicus" [GO:0002092 "positive regulation
of receptor internalization" evidence=ISO;ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005778
"peroxisomal membrane" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0007612 "learning" evidence=ISO;ISS] [GO:0007613
"memory" evidence=ISO;ISS] [GO:0016887 "ATPase activity"
evidence=ISO;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=ISO;ISS] [GO:0051967 "negative
regulation of synaptic transmission, glutamatergic"
evidence=ISO;ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308570 GO:GO:0005886 GO:GO:0005524 GO:GO:0005777 GO:GO:0051967
GO:GO:0007613 GO:GO:0030054 GO:GO:0045211 GO:GO:0007612
GO:GO:0016887 eggNOG:COG0464 GO:GO:0002092 CTD:84896
HOGENOM:HOG000225141 HOVERGEN:HBG057074 OMA:KNENXDR
GeneTree:ENSGT00550000074823 EMBL:BC094514 EMBL:EF688601
IPI:IPI00566676 RefSeq:NP_001030174.1 UniGene:Rn.54918
ProteinModelPortal:Q505J9 IntAct:Q505J9 PhosphoSite:Q505J9
PRIDE:Q505J9 Ensembl:ENSRNOT00000014684 GeneID:309532
KEGG:rno:309532 UCSC:RGD:1308570 NextBio:660942 ArrayExpress:Q505J9
Genevestigator:Q505J9 GermOnline:ENSRNOG00000010861 Uniprot:Q505J9
Length = 361
Score = 299 (110.3 bits), Expect = 5.9e-26, P = 5.9e-26
Identities = 83/280 (29%), Positives = 140/280 (50%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
++W +IAG D +++DT++L ++ ++++ +R P+ VL GPPG GKT
Sbjct: 88 VTWSDIAGLDDVITDLKDTVILPIKKKHLFEN----SRLL---QPPKGVLLYGPPGCGKT 140
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ A +AG + + L P + K+YGES++L VFSLA +L +IIF+DE
Sbjct: 141 LIAKATAKEAGC---RFINLQ--P-STLTDKWYGESQKLAAAVFSLAIKL-QPSIIFIDE 193
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK--KVVVIAATNRKQDLDPALISRFDS 454
+DSF R S HEAT + + + DG + D +V+V+ ATNR QDLD A++ R +
Sbjct: 194 IDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPT 253
Query: 455 MITFGLPDHENRQEIAAQYAKHXXXXXXXXX---XXXXXXMSGRDIRDVCQQAERSWASK 511
P + R+ I K+ SG D++++C+ A +
Sbjct: 254 RFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 313
Query: 512 IIRGQITKDGEQACLPPLQEY-IESATNRRRSLLDAAEQS 550
+ + ++ + P+Q+ + A + + DAA QS
Sbjct: 314 YVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKDAAFQS 353
>TAIR|locus:2168646 [details] [associations]
symbol:AT5G53540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
HOGENOM:HOG000225141 EMBL:AB015476 OMA:VINPLHI EMBL:AY058857
EMBL:BT002644 IPI:IPI00537305 RefSeq:NP_200166.1 UniGene:At.26650
ProteinModelPortal:Q9FJC9 SMR:Q9FJC9 PRIDE:Q9FJC9
EnsemblPlants:AT5G53540.1 GeneID:835436 KEGG:ath:AT5G53540
TAIR:At5g53540 InParanoid:Q9FJC9 PhylomeDB:Q9FJC9
ProtClustDB:CLSN2685508 Genevestigator:Q9FJC9 Uniprot:Q9FJC9
Length = 403
Score = 299 (110.3 bits), Expect = 5.9e-26, P = 5.9e-26
Identities = 84/268 (31%), Positives = 144/268 (53%)
Query: 270 LNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEG 329
+N ++ + +I G + K+ + + ++L L+ PE++ A G K + + VL G
Sbjct: 77 INPLHIDVEFGSIGGLESIKQALYELVILPLKRPELF---AYG---KLLGPQ-KGVLLYG 129
Query: 330 PPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNG 389
PPGTGKT A+ IA ++ A+ + V + +MSK++G++++L+ VFSLA +L
Sbjct: 130 PPGTGKTMLAKAIARESEAV------FINVKVSNLMSKWFGDAQKLVSAVFSLAYKL-QP 182
Query: 390 AIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGF--EQDKKVVVIAATNRKQDLDPA 447
AIIF+DEVDSF R S +EA + + + DGF +Q+ +V+V+AATNR +LD A
Sbjct: 183 AIIFIDEVDSFLGQRRSTDNEAMSNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEA 242
Query: 448 LISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
++ RF G+PD + R +I K +G DI ++C++A
Sbjct: 243 ILRRFPQSFEIGMPDCQERAQILKVVLKGESVESDINYDRIARLCEDYTGSDIFELCKKA 302
Query: 505 ERSWASKIIRGQITKDGEQACLP-PLQE 531
+I+ + K+G++ +P PL +
Sbjct: 303 AYFPIREILEAE--KEGKRVSVPRPLTQ 328
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 322 (118.4 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 89/235 (37%), Positives = 121/235 (51%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+E+ +++I G +Q +I + + L L+ P+++ I G + PR VL GPPGTG
Sbjct: 209 NEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAI--GIK------PPRGVLMYGPPGTG 260
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +AN+ GA + L+ P VMSK GESE L K F A E AIIF+
Sbjct: 261 KTLMARAVANETGAFFF----LINGP--EVMSKMAGESESNLRKAFEEA-EKNAPAIIFI 313
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRF 452
DE+DS A RD E RR++S LL +DG + VVVIAATNR +DPAL RF
Sbjct: 314 DEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRF 373
Query: 453 DSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXMSG---RDIRDVCQQA 504
D + G+PD R E+ + K+ G DI +C +A
Sbjct: 374 DREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEA 428
Score = 274 (101.5 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 86/288 (29%), Positives = 137/288 (47%)
Query: 231 DKPEIEFIKKGSLTSEELDALVSVLQLAGRRIYGLDEPQ-LNTSKSE---ISWENIAGYD 286
+K ++ + + + +E LD+L V R G P L + E ++W+++ G D
Sbjct: 435 EKMDLIDLDEDEIDAEVLDSL-GVTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLD 493
Query: 287 QQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQA 346
+ K E+++T+ + P+ Y KF + + VLF GPPGTGKT A+ +A +
Sbjct: 494 EIKEELKETVEYPVLHPDQYT--------KFGLSPSKGVLFYGPPGTGKTLLAKAVATEV 545
Query: 347 GAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDS 406
A + V ++S +YGESE + +F A ++FLDE+DS A AR
Sbjct: 546 SAN------FISVKGPELLSMWYGESESNIRDIFDKARAAAP-TVVFLDELDSIAKARGG 598
Query: 407 EMHEA---TRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLP 461
+ +A + R+++ LL ++DG K V VI ATNR +DPA++ R D +I LP
Sbjct: 599 SLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLP 658
Query: 462 DHENRQEIA-AQYAKHXXX--XXXXXXXXXXXXMSGRDIRDVCQQAER 506
D R I AQ K SG D+ + Q+A +
Sbjct: 659 DENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAK 706
>UNIPROTKB|F6QV99 [details] [associations]
symbol:ATAD1 "ATPase family AAA domain-containing protein
1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic membrane"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISS] [GO:0007613 "memory" evidence=ISS]
[GO:0007612 "learning" evidence=ISS] [GO:0002092 "positive
regulation of receptor internalization" evidence=ISS] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005886 GO:GO:0005524 GO:GO:0051967
GO:GO:0007613 GO:GO:0030054 GO:GO:0045211 GO:GO:0007612
GO:GO:0016887 GO:GO:0005778 GO:GO:0002092 EMBL:DAAA02058710
EMBL:BC151346 IPI:IPI00706878 RefSeq:NP_001192510.1 UniGene:Bt.8053
GeneID:506045 KEGG:bta:506045 CTD:84896 HOGENOM:HOG000225141
Uniprot:F6QV99
Length = 361
Score = 298 (110.0 bits), Expect = 7.7e-26, P = 7.7e-26
Identities = 84/287 (29%), Positives = 142/287 (49%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
++W +IAG D +++DT++L ++ ++++ +R P+ VL GPPG GKT
Sbjct: 88 VTWSDIAGLDDVITDLKDTVILPIKKKHLFEN----SRLL---QPPKGVLLYGPPGCGKT 140
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ A +AG + + L P + K+YGES++L VFSLA +L +IIF+DE
Sbjct: 141 LIAKATAKEAGC---RFINLQ--P-STLTDKWYGESQKLAAAVFSLAIKL-QPSIIFIDE 193
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK--KVVVIAATNRKQDLDPALISRFDS 454
+DSF R S HEAT + + + DG + D +V+V+ ATNR QDLD A++ R +
Sbjct: 194 IDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPT 253
Query: 455 MITFGLPDHENRQEIAAQYAKHXXXXXXXXX---XXXXXXMSGRDIRDVCQQAERSWASK 511
P + R+ I K+ SG D++++C+ A +
Sbjct: 254 RFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 313
Query: 512 IIRGQITKDGEQACLPPLQEY-IESATNRRRSLLDAAEQSHQNINNH 557
+ + ++ + P+Q+ + A + + DAA QN+ H
Sbjct: 314 YVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKDAA---FQNVLTH 357
>UNIPROTKB|E2RHY1 [details] [associations]
symbol:ATAD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051967 "negative regulation of synaptic
transmission, glutamatergic" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0007613 "memory" evidence=IEA] [GO:0007612
"learning" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0002092
"positive regulation of receptor internalization" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0051967
GO:GO:0007613 GO:GO:0045211 GO:GO:0007612 GO:GO:0016887
GO:GO:0005778 GO:GO:0002092 GeneTree:ENSGT00550000074823
EMBL:AAEX03014938 ProteinModelPortal:E2RHY1 PRIDE:E2RHY1
Ensembl:ENSCAFT00000024819 NextBio:20853036 Uniprot:E2RHY1
Length = 369
Score = 298 (110.0 bits), Expect = 7.7e-26, P = 7.7e-26
Identities = 84/287 (29%), Positives = 142/287 (49%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
++W +IAG D +++DT++L ++ ++++ +R P+ VL GPPG GKT
Sbjct: 96 VTWSDIAGLDDVITDLKDTVILPIKKKHLFEN----SRLL---QPPKGVLLYGPPGCGKT 148
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ A +AG + + L P + K+YGES++L VFSLA +L +IIF+DE
Sbjct: 149 LIAKATAKEAGC---RFINLQ--P-STLTDKWYGESQKLAAAVFSLAIKL-QPSIIFIDE 201
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK--KVVVIAATNRKQDLDPALISRFDS 454
+DSF R S HEAT + + + DG + D +V+V+ ATNR QDLD A++ R +
Sbjct: 202 IDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPT 261
Query: 455 MITFGLPDHENRQEIAAQYAKHXXXXXXXXX---XXXXXXMSGRDIRDVCQQAERSWASK 511
P + R+ I K+ SG D++++C+ A +
Sbjct: 262 RFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 321
Query: 512 IIRGQITKDGEQACLPPLQEY-IESATNRRRSLLDAAEQSHQNINNH 557
+ + ++ + P+Q+ + A + + DAA QN+ H
Sbjct: 322 YVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKDAA---FQNVLTH 365
>UNIPROTKB|Q8NBU5 [details] [associations]
symbol:ATAD1 "ATPase family AAA domain-containing protein
1" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0002092 "positive regulation of
receptor internalization" evidence=ISS] [GO:0007612 "learning"
evidence=ISS] [GO:0007613 "memory" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045211 "postsynaptic membrane"
evidence=ISS] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005886 GO:GO:0005524 GO:GO:0051967
GO:GO:0007613 GO:GO:0030054 GO:GO:0045211 GO:GO:0007612
EMBL:CH471066 GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464
GO:GO:0002092 CTD:84896 EMBL:AF361493 EMBL:AK027506 EMBL:AK075223
EMBL:AL133327 EMBL:AC022016 EMBL:BC010868 EMBL:BC063530
EMBL:BC073998 EMBL:AL834370 IPI:IPI00171445 IPI:IPI00929553
RefSeq:NP_116199.2 UniGene:Hs.435948 ProteinModelPortal:Q8NBU5
SMR:Q8NBU5 IntAct:Q8NBU5 STRING:Q8NBU5 PhosphoSite:Q8NBU5
DMDM:74762551 PaxDb:Q8NBU5 PeptideAtlas:Q8NBU5 PRIDE:Q8NBU5
Ensembl:ENST00000308448 Ensembl:ENST00000328142
Ensembl:ENST00000541004 GeneID:84896 KEGG:hsa:84896 UCSC:uc001key.1
GeneCards:GC10M089502 HGNC:HGNC:25903 HPA:HPA037569 MIM:614452
neXtProt:NX_Q8NBU5 PharmGKB:PA134914940 HOVERGEN:HBG057074
InParanoid:Q8NBU5 OMA:KNENXDR OrthoDB:EOG412M5T PhylomeDB:Q8NBU5
ChiTaRS:ATAD1 GenomeRNAi:84896 NextBio:75244 ArrayExpress:Q8NBU5
Bgee:Q8NBU5 CleanEx:HS_ATAD1 Genevestigator:Q8NBU5
GermOnline:ENSG00000138138 Uniprot:Q8NBU5
Length = 361
Score = 298 (110.0 bits), Expect = 7.7e-26, P = 7.7e-26
Identities = 84/287 (29%), Positives = 142/287 (49%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
++W +IAG D +++DT++L ++ ++++ +R P+ VL GPPG GKT
Sbjct: 88 VTWSDIAGLDDVITDLKDTVILPIKKKHLFEN----SRLL---QPPKGVLLYGPPGCGKT 140
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ A +AG + + L P + K+YGES++L VFSLA +L +IIF+DE
Sbjct: 141 LIAKATAKEAGC---RFINLQ--P-STLTDKWYGESQKLAAAVFSLAIKL-QPSIIFIDE 193
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK--KVVVIAATNRKQDLDPALISRFDS 454
+DSF R S HEAT + + + DG + D +V+V+ ATNR QDLD A++ R +
Sbjct: 194 IDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPT 253
Query: 455 MITFGLPDHENRQEIAAQYAKHXXXXXXXXX---XXXXXXMSGRDIRDVCQQAERSWASK 511
P + R+ I K+ SG D++++C+ A +
Sbjct: 254 RFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 313
Query: 512 IIRGQITKDGEQACLPPLQEY-IESATNRRRSLLDAAEQSHQNINNH 557
+ + ++ + P+Q+ + A + + DAA QN+ H
Sbjct: 314 YVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKDAA---FQNVLTH 357
>UNIPROTKB|F2Z5H2 [details] [associations]
symbol:ATAD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0007612 "learning"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0002092 "positive
regulation of receptor internalization" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0051967 GO:GO:0007613
GO:GO:0045211 GO:GO:0007612 GO:GO:0016887 GO:GO:0005778
GO:GO:0002092 OMA:KNENXDR GeneTree:ENSGT00550000074823
EMBL:CT827875 Ensembl:ENSSSCT00000011423 Uniprot:F2Z5H2
Length = 365
Score = 298 (110.0 bits), Expect = 7.7e-26, P = 7.7e-26
Identities = 84/287 (29%), Positives = 142/287 (49%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
++W +IAG D +++DT++L ++ ++++ +R P+ VL GPPG GKT
Sbjct: 92 VTWSDIAGLDDVITDLKDTVILPIKKKHLFEN----SRLL---QPPKGVLLYGPPGCGKT 144
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ A +AG + + L P + K+YGES++L VFSLA +L +IIF+DE
Sbjct: 145 LIAKATAKEAGC---RFINLQ--P-STLTDKWYGESQKLAAAVFSLAIKL-QPSIIFIDE 197
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK--KVVVIAATNRKQDLDPALISRFDS 454
+DSF R S HEAT + + + DG + D +V+V+ ATNR QDLD A++ R +
Sbjct: 198 IDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPT 257
Query: 455 MITFGLPDHENRQEIAAQYAKHXXXXXXXXX---XXXXXXMSGRDIRDVCQQAERSWASK 511
P + R+ I K+ SG D++++C+ A +
Sbjct: 258 RFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 317
Query: 512 IIRGQITKDGEQACLPPLQEY-IESATNRRRSLLDAAEQSHQNINNH 557
+ + ++ + P+Q+ + A + + DAA QN+ H
Sbjct: 318 YVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKDAA---FQNVLTH 361
>MGI|MGI:1915229 [details] [associations]
symbol:Atad1 "ATPase family, AAA domain containing 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0002092 "positive regulation of receptor
internalization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0007612 "learning"
evidence=IMP] [GO:0007613 "memory" evidence=IMP] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1915229 GO:GO:0005739 GO:GO:0005886 GO:GO:0005524
GO:GO:0051967 GO:GO:0007613 GO:GO:0030054 GO:GO:0045211
GO:GO:0007612 GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464
GO:GO:0002092 CTD:84896 HOGENOM:HOG000225141 HOVERGEN:HBG057074
OMA:KNENXDR OrthoDB:EOG412M5T ChiTaRS:ATAD1 EMBL:AK009419
EMBL:AK014967 EMBL:AK030719 EMBL:AK033639 EMBL:AK150469
EMBL:AK152059 EMBL:AK165953 EMBL:BC029085 EMBL:BC043051
IPI:IPI00108410 RefSeq:NP_080763.2 UniGene:Mm.27123
ProteinModelPortal:Q9D5T0 SMR:Q9D5T0 IntAct:Q9D5T0
PhosphoSite:Q9D5T0 PaxDb:Q9D5T0 PRIDE:Q9D5T0
Ensembl:ENSMUST00000070210 GeneID:67979 KEGG:mmu:67979
UCSC:uc008hfo.1 GeneTree:ENSGT00550000074823 InParanoid:Q9D5T0
NextBio:326122 Bgee:Q9D5T0 CleanEx:MM_ATAD1 Genevestigator:Q9D5T0
GermOnline:ENSMUSG00000013662 Uniprot:Q9D5T0
Length = 361
Score = 298 (110.0 bits), Expect = 7.7e-26, P = 7.7e-26
Identities = 84/287 (29%), Positives = 142/287 (49%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
++W +IAG D +++DT++L ++ ++++ +R P+ VL GPPG GKT
Sbjct: 88 VTWSDIAGLDDVITDLKDTVILPIKKKHLFEN----SRLL---QPPKGVLLYGPPGCGKT 140
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ A +AG + + L P + K+YGES++L VFSLA +L +IIF+DE
Sbjct: 141 LIAKATAKEAGC---RFINLQ--P-STLTDKWYGESQKLAAAVFSLAIKL-QPSIIFIDE 193
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK--KVVVIAATNRKQDLDPALISRFDS 454
+DSF R S HEAT + + + DG + D +V+V+ ATNR QDLD A++ R +
Sbjct: 194 IDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPT 253
Query: 455 MITFGLPDHENRQEIAAQYAKHXXXXXXXXX---XXXXXXMSGRDIRDVCQQAERSWASK 511
P + R+ I K+ SG D++++C+ A +
Sbjct: 254 RFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 313
Query: 512 IIRGQITKDGEQACLPPLQEY-IESATNRRRSLLDAAEQSHQNINNH 557
+ + ++ + P+Q+ + A + + DAA QN+ H
Sbjct: 314 YVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKDAA---FQNVLTH 357
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 297 (109.6 bits), Expect = 9.9e-26, P = 9.9e-26
Identities = 80/203 (39%), Positives = 111/203 (54%)
Query: 272 TSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPP 331
T + + + ++ G D QK+E+++ + L L PE+Y+ I E P +L GPP
Sbjct: 130 TERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIG------IEP--PMGILIYGPP 181
Query: 332 GTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAI 391
GTGKT + +AN+ + + GV V E V KY GE R++ VF LA E + +I
Sbjct: 182 GTGKTMLVKAVANET-QVTFIGV----VGSEFVQ-KYLGEGPRMVRDVFRLARE-NSPSI 234
Query: 392 IFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL 448
IF+DEVD+ A R A R RIL LL Q+DGF++ V VI ATNR LDPAL
Sbjct: 235 IFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPAL 294
Query: 449 I--SRFDSMITFGLPDHENRQEI 469
+ R D I F LPD + ++ I
Sbjct: 295 LRPGRLDRKIEFPLPDRKQKRLI 317
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 297 (109.6 bits), Expect = 9.9e-26, P = 9.9e-26
Identities = 80/203 (39%), Positives = 111/203 (54%)
Query: 272 TSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPP 331
T + + + ++ G D QK+E+++ + L L PE+Y+ I E P +L GPP
Sbjct: 130 TERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIG------IEP--PMGILIYGPP 181
Query: 332 GTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAI 391
GTGKT + +AN+ + + GV V E V KY GE R++ VF LA E + +I
Sbjct: 182 GTGKTMLVKAVANET-QVTFIGV----VGSEFVQ-KYLGEGPRMVRDVFRLARE-NSPSI 234
Query: 392 IFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL 448
IF+DEVD+ A R A R RIL LL Q+DGF++ V VI ATNR LDPAL
Sbjct: 235 IFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPAL 294
Query: 449 I--SRFDSMITFGLPDHENRQEI 469
+ R D I F LPD + ++ I
Sbjct: 295 LRPGRLDRKIEFPLPDRKQKRLI 317
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 318 (117.0 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 86/238 (36%), Positives = 124/238 (52%)
Query: 272 TSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPP 331
+S +E+ +++I G +Q +I + + L L+ P+++ I G + PR +L GPP
Sbjct: 216 SSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSI--GIK------PPRGILMYGPP 267
Query: 332 GTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAI 391
GTGKT AR +AN+ GA + L+ P +MSK GESE L K F A E + AI
Sbjct: 268 GTGKTLMARAVANETGAFFF----LINGP--EIMSKMAGESESNLRKAFEEA-EKNSPAI 320
Query: 392 IFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--I 449
IF+DE+DS A R+ E RR++S LL +DG + VVV+AATNR +DPAL
Sbjct: 321 IFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRF 380
Query: 450 SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXMSG---RDIRDVCQQA 504
RFD + G+PD R EI + K+ G D+ +C +A
Sbjct: 381 GRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEA 438
Score = 285 (105.4 bits), Expect = 8.9e-22, P = 8.9e-22
Identities = 96/346 (27%), Positives = 159/346 (45%)
Query: 231 DKPEIEFIKKGSLTSEELDALVSVLQLAGRRIYGLDEPQ-LNTSKSEIS---WENIAGYD 286
+K ++ + + + +E LD+L V R G P L + E+ WE+I G +
Sbjct: 445 EKMDMIDLDEDEIDAEVLDSL-GVTMDNFRFALGSSNPSALRETVVEVPNVRWEDIGGLE 503
Query: 287 QQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQA 346
+ KRE+ +T+ Q P +Y + +F + VLF GPPGTGKT A+ IAN+
Sbjct: 504 EVKRELRETV----QMPVMYAE----KFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANEC 555
Query: 347 GAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDS 406
A + V ++S ++GESE + +F A ++FLDE+DS A AR +
Sbjct: 556 SAN------FISVKGPELLSMWFGESESNVRDIFDKARAAAP-CVVFLDELDSIAKARGA 608
Query: 407 EMHEATR--RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPD 462
++ R+++ LL ++DG K V VI ATNR +DPAL+ R D +I LPD
Sbjct: 609 SAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPD 668
Query: 463 HENRQEIAAQYAKHXXXXXXX---XXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQITK 519
E R I +H SG D+ V Q+A + I I +
Sbjct: 669 EEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIKR 728
Query: 520 DGEQACLPP----LQEYIESATNRRRSLLDAAEQSHQNINNHRTKK 561
+ E P + E + +R + +A + + +++++ ++
Sbjct: 729 ENETGEAPADDVVMDEDASVSQVQRHHVEEAMKMARRSVSDAEVRR 774
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 318 (117.0 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 85/235 (36%), Positives = 123/235 (52%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+E+ +++I G +Q +I + + L L+ P+++ I G + PR +L GPPGTG
Sbjct: 220 NEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSI--GIK------PPRGILMYGPPGTG 271
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +AN+ GA + L+ P +MSK GESE L K F A E + AIIF+
Sbjct: 272 KTLMARAVANETGAFFF----LINGP--EIMSKMAGESESNLRKAFEEA-EKNSPAIIFI 324
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRF 452
DE+DS A R+ E RR++S LL +DG + VVV+AATNR +DPAL RF
Sbjct: 325 DEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRF 384
Query: 453 DSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXMSG---RDIRDVCQQA 504
D + G+PD R EI + + K+ G D+ +C +A
Sbjct: 385 DREVDIGIPDPTGRLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEA 439
Score = 284 (105.0 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 88/306 (28%), Positives = 147/306 (48%)
Query: 231 DKPEIEFIKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKS-----EISWENIAGY 285
+K ++ + + ++ +E LD+L V R G+ P + + WE+I G
Sbjct: 446 EKMDLIDLDEDTIDAEVLDSL-GVTMENFRYALGVSNPSALREVAVVEVPNVRWEDIGGL 504
Query: 286 DQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQ 345
++ KRE+ +++ + PE + KF + R VLF GPPGTGKT A+ +AN+
Sbjct: 505 EEVKRELIESVQYPVDHPEKFQ--------KFGLSPSRGVLFYGPPGTGKTMLAKAVANE 556
Query: 346 AGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARD 405
A + V ++S ++GESE + +F A ++FLDE+DS A +R
Sbjct: 557 CAAN------FISVKGPELLSMWFGESESNIRDIFDKARAAAP-CVVFLDELDSIAKSRG 609
Query: 406 SEMHEA---TRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGL 460
+ +A + R+++ LL ++DG K V VI ATNR + LD AL+ R D+++ L
Sbjct: 610 GSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPL 669
Query: 461 PDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQI 517
PD +R+ I AQ K SG D+ V Q+A + + I +I
Sbjct: 670 PDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKESISAEI 729
Query: 518 TKDGEQ 523
+ ++
Sbjct: 730 ERQKQR 735
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 294 (108.6 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 92/295 (31%), Positives = 142/295 (48%)
Query: 238 IKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTIL 297
+K G+ + ++ L ++++ R + L + ++++ I G Q RE+ + I
Sbjct: 100 LKSGTRVALDMTTL-TIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELREVIE 158
Query: 298 LSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLM 357
L L +PE++ + P+ L GPPGTGKT AR +A+Q A +
Sbjct: 159 LPLLNPELF--------LRVGITPPKGCLLYGPPGTGKTLLARAVASQLDAN------FL 204
Query: 358 YVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI-- 415
V ++ KY GES RL+ ++F+ A + IIF+DE+D+ R SE A R I
Sbjct: 205 KVVSSAIVDKYIGESARLIREMFNYARD-HQPCIIFMDEIDAIGGRRFSEGTSADREIQR 263
Query: 416 -LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI--- 469
L LL Q+DGF+ +V +I ATNR LDPAL+ R D I LP+ + R EI
Sbjct: 264 TLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQARLEILKI 323
Query: 470 -AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAE----RSWASKIIRGQITK 519
A + AKH +G D+R+VC +A R+ +I+G K
Sbjct: 324 HALKIAKHGEIDYEAIVKLSDN-FNGADLRNVCTEAGLFAIRAEREYVIQGDFMK 377
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 316 (116.3 bits), Expect = 3.0e-25, P = 3.0e-25
Identities = 82/204 (40%), Positives = 115/204 (56%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+E+ +++I G +Q +I + + L L+ P+++ I G + PR VL GPPGTG
Sbjct: 217 NEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSI--GIK------PPRGVLLYGPPGTG 268
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +AN+ GA + L+ P +MSK GESE L K F A E + AIIF+
Sbjct: 269 KTLMARAVANETGAFFF----LINGP--EIMSKMAGESESNLRKAFEEA-EKNSPAIIFI 321
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRF 452
DE+DS A R+ E RR++S LL +DG + VVV+AATNR +DPAL RF
Sbjct: 322 DEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRF 381
Query: 453 DSMITFGLPDHENRQEIAAQYAKH 476
D + G+PD R EI + K+
Sbjct: 382 DREVDIGIPDPTGRLEILQIHTKN 405
Score = 289 (106.8 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 101/344 (29%), Positives = 160/344 (46%)
Query: 231 DKPEIEFIKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKS-----EISWENIAGY 285
+K ++ + + ++ +E LD+L V R G+ P + + WE+I G
Sbjct: 443 EKMDLIDLDEDTIDAEVLDSL-GVTMENFRFALGVSNPSALREVAVVEVPNVRWEDIGGL 501
Query: 286 DQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQ 345
D+ K+++ + + + PE + KF + R VLF GPPGTGKT A+ +AN+
Sbjct: 502 DEVKQDLREQVQYPVDHPEKF--------LKFGLSPSRGVLFYGPPGTGKTMLAKAVANE 553
Query: 346 AGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARD 405
A + V ++S ++GESE + +F A I+FLDE+DS A AR
Sbjct: 554 CAAN------FISVKGPELLSMWFGESESNIRDIFDKARAAAP-CIVFLDELDSIAKARG 606
Query: 406 SEMHEA---TRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGL 460
+ +A + R+++ LL ++DG K V VI ATNR + LDPAL R DS+I L
Sbjct: 607 GSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPL 666
Query: 461 PDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQI 517
PD R I AQ K SG D+ + Q+A + + I I
Sbjct: 667 PDELGRLSILKAQLRKTPVSDDVDLQYIANKTHGFSGADLGFITQRAVKIAIKESITADI 726
Query: 518 --TKDGEQACLP-PLQEYIESATNR--RRSLLDAAEQSHQNINN 556
TK E A P+ E E +R +A +Q+ +++++
Sbjct: 727 NRTKALEAAGEDVPMDEDAEDPVPELTKRHFEEAMQQARKSVSD 770
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 316 (116.3 bits), Expect = 6.2e-25, P = 6.2e-25
Identities = 87/244 (35%), Positives = 132/244 (54%)
Query: 230 SDKPEIEFIKKGSLTSE--ELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQ 287
++K E + +K S SE E + QL Y L + +I++E++ G +
Sbjct: 476 NNKIEFKVLKIISEESENEEFGCIGEHSQLTLAEEY-LKREDYEENNDDITYEDLGGMKK 534
Query: 288 QKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAG 347
Q +I + I L L+ PE++ I + P+ VL G PGTGKTS A+ IAN++
Sbjct: 535 QLNKIRELIELPLKYPEIFMSIG--------ISAPKGVLMHGIPGTGKTSIAKAIANESN 586
Query: 348 AMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSE 407
A + ++ P +MSK+ GESE+ L K+F A+E IIF+DE+DS A R
Sbjct: 587 AYCY----IINGP--EIMSKHIGESEQKLRKIFKKASE-KTPCIIFIDEIDSIANKRSKS 639
Query: 408 MHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHEN 465
+E +R++S LL +DG +++ V+V+AATNR +DPAL RFD I +PD +
Sbjct: 640 NNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQG 699
Query: 466 RQEI 469
R EI
Sbjct: 700 RYEI 703
Score = 285 (105.4 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 76/234 (32%), Positives = 120/234 (51%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
++W +I G ++ K ++++TIL L+ +Y+ KF SN + +L GPPG GKT
Sbjct: 931 VTWNDIGGMNEVKEQLKETILYPLEYKHLYN--------KFNSNYNKGILLYGPPGCGKT 982
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ IAN+ A + V +++ ++GESE + +F A + IIF DE
Sbjct: 983 LLAKAIANECKAN------FISVKGPELLTMWFGESEANVRDLFDKARAA-SPCIIFFDE 1035
Query: 397 VDSFAVARDSEMH-EATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFD 453
+DS A R+S + +A+ R+++ +L +IDG + K + +IAATNR LD AL R D
Sbjct: 1036 IDSLAKERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLD 1095
Query: 454 SMITFGLPDHENRQEIAAQYAKHX---XXXXXXXXXXXXXXMSGRDIRDVCQQA 504
+I LPD ++R I K+ SG DI ++CQ A
Sbjct: 1096 KLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSA 1149
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 316 (116.3 bits), Expect = 6.2e-25, P = 6.2e-25
Identities = 87/244 (35%), Positives = 132/244 (54%)
Query: 230 SDKPEIEFIKKGSLTSE--ELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQ 287
++K E + +K S SE E + QL Y L + +I++E++ G +
Sbjct: 476 NNKIEFKVLKIISEESENEEFGCIGEHSQLTLAEEY-LKREDYEENNDDITYEDLGGMKK 534
Query: 288 QKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAG 347
Q +I + I L L+ PE++ I + P+ VL G PGTGKTS A+ IAN++
Sbjct: 535 QLNKIRELIELPLKYPEIFMSIG--------ISAPKGVLMHGIPGTGKTSIAKAIANESN 586
Query: 348 AMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSE 407
A + ++ P +MSK+ GESE+ L K+F A+E IIF+DE+DS A R
Sbjct: 587 AYCY----IINGP--EIMSKHIGESEQKLRKIFKKASE-KTPCIIFIDEIDSIANKRSKS 639
Query: 408 MHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHEN 465
+E +R++S LL +DG +++ V+V+AATNR +DPAL RFD I +PD +
Sbjct: 640 NNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQG 699
Query: 466 RQEI 469
R EI
Sbjct: 700 RYEI 703
Score = 285 (105.4 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 76/234 (32%), Positives = 120/234 (51%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
++W +I G ++ K ++++TIL L+ +Y+ KF SN + +L GPPG GKT
Sbjct: 931 VTWNDIGGMNEVKEQLKETILYPLEYKHLYN--------KFNSNYNKGILLYGPPGCGKT 982
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ IAN+ A + V +++ ++GESE + +F A + IIF DE
Sbjct: 983 LLAKAIANECKAN------FISVKGPELLTMWFGESEANVRDLFDKARAA-SPCIIFFDE 1035
Query: 397 VDSFAVARDSEMH-EATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFD 453
+DS A R+S + +A+ R+++ +L +IDG + K + +IAATNR LD AL R D
Sbjct: 1036 IDSLAKERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLD 1095
Query: 454 SMITFGLPDHENRQEIAAQYAKHX---XXXXXXXXXXXXXXMSGRDIRDVCQQA 504
+I LPD ++R I K+ SG DI ++CQ A
Sbjct: 1096 KLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSA 1149
>TAIR|locus:2137777 [details] [associations]
symbol:AT4G27680 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161571 GO:GO:0000502
HSSP:Q01853 eggNOG:COG0464 GO:GO:0017111 HOGENOM:HOG000225141
EMBL:AL035602 OMA:EMCRNAS ProtClustDB:CLSN2685508 EMBL:AY093063
EMBL:AY085265 EMBL:BT000126 EMBL:AK226334 IPI:IPI00547334
PIR:T05873 RefSeq:NP_194498.1 UniGene:At.32076
ProteinModelPortal:Q9T090 SMR:Q9T090 STRING:Q9T090 PaxDb:Q9T090
PRIDE:Q9T090 EnsemblPlants:AT4G27680.1 GeneID:828882
KEGG:ath:AT4G27680 TAIR:At4g27680 InParanoid:Q9T090
PhylomeDB:Q9T090 Genevestigator:Q9T090 Uniprot:Q9T090
Length = 398
Score = 292 (107.8 bits), Expect = 7.1e-25, P = 7.1e-25
Identities = 84/255 (32%), Positives = 136/255 (53%)
Query: 220 CILIFRSLITSDKPEIEFIKKGSLTSEELDALVS--VLQLAGRR-IYGLDEPQLNTSKSE 276
C+++F L D P E KK +E+ + ++Q + D +N +
Sbjct: 24 CLVLFAGLRHLD-PNREASKKALEHKKEISKRLGRPLVQTNPYEDVIACDV--INPDHID 80
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+ + +I G + K+ + + ++L L+ PE++ A G K + + VL GPPGTGKT
Sbjct: 81 VEFGSIGGLETIKQALYELVILPLKRPELF---AYG---KLLGPQ-KGVLLYGPPGTGKT 133
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ IA ++GA+ + V + +MSK++G++++L+ VFSLA +L AIIF+DE
Sbjct: 134 MLAKAIAKESGAV------FINVRVSNLMSKWFGDAQKLVSAVFSLAYKL-QPAIIFIDE 186
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK--KVVVIAATNRKQDLDPALISRFDS 454
V+SF R S HEA + + + DGF D +V+V+AATNR +LD A++ R
Sbjct: 187 VESFLGQRRSTDHEAMANMKTEFMALWDGFSTDPHARVMVLAATNRPSELDEAILRRLPQ 246
Query: 455 MITFGLPDHENRQEI 469
G+PD R EI
Sbjct: 247 AFEIGIPDRRERAEI 261
>SGD|S000003260 [details] [associations]
symbol:MSP1 "Mitochondrial protein involved in mitochondrial
protein sorting" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005741
"mitochondrial outer membrane" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006626 "protein targeting to
mitochondrion" evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000003260 GO:GO:0016021 GO:GO:0005524 GO:GO:0006626
EMBL:BK006941 GO:GO:0005741 GO:GO:0016887 eggNOG:COG0464
HOGENOM:HOG000225141 GeneTree:ENSGT00550000074823 KO:K00706
EMBL:X60722 EMBL:X68055 EMBL:Z72813 RefSeq:NP_011546.3
GeneID:852920 KEGG:sce:YGR032W EMBL:X81069 EMBL:AY557772 PIR:A49506
RefSeq:NP_011542.3 ProteinModelPortal:P28737 SMR:P28737
DIP:DIP-8029N IntAct:P28737 MINT:MINT-4486830 STRING:P28737
PaxDb:P28737 PeptideAtlas:P28737 EnsemblFungi:YGR028W GeneID:852915
KEGG:sce:YGR028W CYGD:YGR028w OMA:VINPLHI OrthoDB:EOG4BVW3J
NextBio:972614 Genevestigator:P28737 GermOnline:YGR028W
Uniprot:P28737
Length = 362
Score = 289 (106.8 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 72/242 (29%), Positives = 119/242 (49%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
I++++I G D ++ ++++ L PEVY + P VL GPPG GKT
Sbjct: 88 ITFQDIGGLDPLISDLHESVIYPLMMPEVYSNSPL-------LQAPSGVLLYGPPGCGKT 140
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ +A ++GA + + + +M K+YGES +++ +FSLAN+L IIF+DE
Sbjct: 141 MLAKALAKESGAN------FISIRMSSIMDKWYGESNKIVDAMFSLANKL-QPCIIFIDE 193
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMI 456
+DSF R S HE T + + + DG + +V++I ATNR D+D A + R
Sbjct: 194 IDSFLRERSSTDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLRRLPKRF 253
Query: 457 TFGLPDHENRQEIAAQYAKHXXXXXXXXX----XXXXXXMSGRDIRDVCQQAERSWASKI 512
LP + R +I + K SG D++++C++A A +
Sbjct: 254 LVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAKEY 313
Query: 513 IR 514
I+
Sbjct: 314 IK 315
>UNIPROTKB|F1PX89 [details] [associations]
symbol:ATAD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00550000074823 OMA:YQVGIAD
EMBL:AAEX03014938 Ensembl:ENSCAFT00000035123 Uniprot:F1PX89
Length = 418
Score = 298 (110.0 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 84/287 (29%), Positives = 142/287 (49%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
++W +IAG D +++DT++L ++ ++++ +R P+ VL GPPG GKT
Sbjct: 145 VTWSDIAGLDDVITDLKDTVILPIKKKHLFEN----SRLL---QPPKGVLLYGPPGCGKT 197
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ A +AG + + L P + K+YGES++L VFSLA +L +IIF+DE
Sbjct: 198 LIAKATAKEAGC---RFINLQ--P-STLTDKWYGESQKLAAAVFSLAIKL-QPSIIFIDE 250
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK--KVVVIAATNRKQDLDPALISRFDS 454
+DSF R S HEAT + + + DG + D +V+V+ ATNR QDLD A++ R +
Sbjct: 251 IDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPT 310
Query: 455 MITFGLPDHENRQEIAAQYAKHXXXXXXXXX---XXXXXXMSGRDIRDVCQQAERSWASK 511
P + R+ I K+ SG D++++C+ A +
Sbjct: 311 RFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 370
Query: 512 IIRGQITKDGEQACLPPLQEY-IESATNRRRSLLDAAEQSHQNINNH 557
+ + ++ + P+Q+ + A + + DAA QN+ H
Sbjct: 371 YVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKDAA---FQNVLTH 414
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 287 (106.1 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 86/276 (31%), Positives = 133/276 (48%)
Query: 238 IKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTIL 297
+K G+ + ++ L ++++ R + L + ++S+ I G +Q RE+ + I
Sbjct: 92 LKPGTRVALDMTTL-TIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELREVIE 150
Query: 298 LSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLM 357
L L +PE++ + P+ L GPPGTGKT AR +A+Q +
Sbjct: 151 LPLTNPELFQRVG--------IIPPKGCLLYGPPGTGKTLLARAVASQLDCN------FL 196
Query: 358 YVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI-- 415
V ++ KY GES RL+ ++F+ A + IIF+DE+D+ R SE A R I
Sbjct: 197 KVVSSSIVDKYIGESARLIREMFNYARD-HQPCIIFMDEIDAIGGRRFSEGTSADREIQR 255
Query: 416 -LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI--- 469
L LL Q+DGF+ +V +I ATNR LDPAL+ R D I LP+ + R +I
Sbjct: 256 TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 315
Query: 470 -AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
A KH +G D+R+VC +A
Sbjct: 316 HAGPITKHGEIDYEAIVKLSDG-FNGADLRNVCTEA 350
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 310 (114.2 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 84/237 (35%), Positives = 123/237 (51%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S + + +++I G +Q +I++ + L L+ P ++ I G + PR +L GPPG
Sbjct: 194 SLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAI--GVK------PPRGILMYGPPG 245
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ GA + L+ P +MSK GESE L K F A E + AII
Sbjct: 246 TGKTLIARAVANETGAFFF----LINGP--EIMSKLAGESESNLRKAFEEA-EKNSPAII 298
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--IS 450
F+DE+D+ A RD E RRI+S LL +DG ++ ++V+AATNR +DPAL
Sbjct: 299 FIDEIDAIAPKRDKTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFG 358
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXMSGR---DIRDVCQQA 504
RFD I G+PD R E+ + K+ G D+ +C +A
Sbjct: 359 RFDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEA 415
Score = 271 (100.5 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 74/255 (29%), Positives = 125/255 (49%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
+W +I G + K+E+++ + ++ P+ + KF R VLF GPPG GKT
Sbjct: 472 TWTDIGGLESVKKELQELVQYPVEHPDKF--------LKFGMQPSRGVLFYGPPGCGKTL 523
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEV 397
A+ IAN+ A + V +++ ++GESE + +F A ++F DE+
Sbjct: 524 LAKAIANECQAN------FISVKGPELLTMWFGESEANVRDIFDKARSAAP-CVLFFDEL 576
Query: 398 DSFAVARDSEMHEA---TRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRF 452
DS A AR + +A R+++ +L ++DG K V +I ATNR +DPA++ R
Sbjct: 577 DSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRL 636
Query: 453 DSMITFGLPDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWA 509
D +I LPD ++R+ I A K SG D+ ++CQ+A +
Sbjct: 637 DQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAI 696
Query: 510 SKIIRGQITKDGEQA 524
+ I +I ++ E+A
Sbjct: 697 RQAIEAEIRREKERA 711
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 310 (114.2 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 82/206 (39%), Positives = 116/206 (56%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S +E+ +++I G +Q +I++ + L L+ P ++ I G + PR +L GPPG
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAI--GVK------PPRGILLYGPPG 248
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ GA + L+ P +MSK GESE L K F A E AII
Sbjct: 249 TGKTLIARAVANETGAFFF----LINGP--EIMSKLAGESESNLRKAFEEA-EKNAPAII 301
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--IS 450
F+DE+D+ A R+ E RRI+S LL +DG +Q V+V+AATNR +DPAL
Sbjct: 302 FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKH 476
RFD + G+PD R EI + K+
Sbjct: 362 RFDREVDIGIPDSTGRLEILQIHTKN 387
Score = 284 (105.0 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 80/297 (26%), Positives = 144/297 (48%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++WE+I G + KRE+++ + ++ P+ + KF + VLF GPPG GK
Sbjct: 473 QVTWEDIGGLEDVKRELQELVQYPVEHPDKF--------LKFGMTPSKGVLFYGPPGCGK 524
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IAN+ A + + +++ ++GESE + ++F A + ++F D
Sbjct: 525 TLLAKAIANECQAN------FISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFD 577
Query: 396 EVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
E+DS A AR + + A R+++ +L ++DG K V +I ATNR +DPA++
Sbjct: 578 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 637
Query: 451 RFDSMITFGLPDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERS 507
R D +I LPD ++R I A K SG D+ ++CQ+A +
Sbjct: 638 RLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKL 697
Query: 508 WASKIIRGQITKDGEQACLPPLQEYIES---ATNRRRSLLDAAEQSHQNINNHRTKK 561
+ I +I ++ E+ P E E RR +A + ++++++ +K
Sbjct: 698 AIRESIENEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 310 (114.2 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 82/206 (39%), Positives = 116/206 (56%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S +E+ +++I G +Q +I++ + L L+ P ++ I G + PR +L GPPG
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAI--GVK------PPRGILLYGPPG 248
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ GA + L+ P +MSK GESE L K F A E AII
Sbjct: 249 TGKTLIARAVANETGAFFF----LINGP--EIMSKLAGESESNLRKAFEEA-EKNAPAII 301
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--IS 450
F+DE+D+ A R+ E RRI+S LL +DG +Q V+V+AATNR +DPAL
Sbjct: 302 FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKH 476
RFD + G+PD R EI + K+
Sbjct: 362 RFDREVDIGIPDSTGRLEILQIHTKN 387
Score = 282 (104.3 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 79/297 (26%), Positives = 144/297 (48%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++WE+I G + KRE+++ + ++ P+ + KF + VLF GPPG GK
Sbjct: 473 QVTWEDIGGLEDVKRELQELVQYPVEHPDKF--------LKFGMTPSKGVLFYGPPGCGK 524
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IAN+ A + + +++ ++GESE + ++F A + ++F D
Sbjct: 525 TLLAKAIANECQAN------FISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFD 577
Query: 396 EVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
E+DS A AR + + A R+++ +L ++DG K V +I ATNR +DPA++
Sbjct: 578 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPG 637
Query: 451 RFDSMITFGLPDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERS 507
R D +I LPD ++R I A K SG D+ ++CQ+A +
Sbjct: 638 RLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKL 697
Query: 508 WASKIIRGQITKDGEQACLPPLQEYIES---ATNRRRSLLDAAEQSHQNINNHRTKK 561
+ I +I ++ ++ P E E RR +A + ++++++ +K
Sbjct: 698 AIRESIENEIRRERDRQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 310 (114.2 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 82/206 (39%), Positives = 116/206 (56%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S +E+ +++I G +Q +I++ + L L+ P ++ I G + PR +L GPPG
Sbjct: 197 SLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAI--GVK------PPRGILLYGPPG 248
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ GA + L+ P +MSK GESE L K F A E AII
Sbjct: 249 TGKTLIARAVANETGAFFF----LINGP--EIMSKLAGESESNLRKAFEEA-EKNAPAII 301
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--IS 450
F+DE+D+ A R+ E RRI+S LL +DG +Q V+V+AATNR +DPAL
Sbjct: 302 FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKH 476
RFD + G+PD R EI + K+
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKN 387
Score = 287 (106.1 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 78/266 (29%), Positives = 130/266 (48%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
I+WE+I G D KRE+++ + ++ P+ + KF + VLF GPPG GKT
Sbjct: 474 ITWEDIGGLDDVKRELQELVQYPVEHPDKF--------LKFGMTPSKGVLFYGPPGCGKT 525
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ IAN+ A + + +++ ++GESE + ++F A + ++F DE
Sbjct: 526 LLAKAIANECQAN------FISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFDE 578
Query: 397 VDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS A AR + + A R+++ +L ++DG K V +I ATNR +DPA++ R
Sbjct: 579 LDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 452 FDSMITFGLPDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERSW 508
D +I LPD ++R I A K SG D+ ++CQ+A +
Sbjct: 639 LDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLA 698
Query: 509 ASKIIRGQITKDGEQACLPPLQEYIE 534
+ I +I ++ E+ P E E
Sbjct: 699 IRESIENEIRRERERQTNPSAMEVEE 724
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 310 (114.2 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 87/234 (37%), Positives = 122/234 (52%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
EI +++I G +Q +I + I L L+ P ++ + G + PR VL GPPG+GK
Sbjct: 203 EIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTL--GVK------PPRGVLLYGPPGSGK 254
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T AR +AN+ GA + L+ P VMSK GE+E L + F A E + AIIF+D
Sbjct: 255 TCIARAVANETGAFFF----LINGP--EVMSKMAGEAEANLRRAFEEA-EKNSPAIIFID 307
Query: 396 EVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFD 453
E+DS A R+ E RR++S LL +DG + +VVVIAATNR+ +DPAL RFD
Sbjct: 308 EIDSIAPKREKTNGEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFD 367
Query: 454 SMITFGLPDHENRQEIAAQYAKHXXXX---XXXXXXXXXXXMSGRDIRDVCQQA 504
I G+PD R EI + K+ G D+ +C +A
Sbjct: 368 REIDIGVPDDNGRFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEA 421
Score = 247 (92.0 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 78/290 (26%), Positives = 130/290 (44%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+ W++I G D+ K + + IL + P+ ++ KF + R VLF GPPG GKT
Sbjct: 477 VKWDDIGGLDEVKSTLREMILYPIDHPDKFE--------KFGMSPSRGVLFYGPPGCGKT 528
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ +A++ A + + +++ ++GESE + +VF A ++F DE
Sbjct: 529 LLAKAVASECSAN------FVSIKGPELLTMWFGESEANVREVFDKARAAAP-CVLFFDE 581
Query: 397 VDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS R S + + A R+++ LL +IDG K + I ATNR + LD AL+ R
Sbjct: 582 LDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGR 641
Query: 452 FDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRDVCQQAERSW 508
D +I LPD R I + SG D+ ++CQ+A R+
Sbjct: 642 LDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAA 701
Query: 509 ASKIIRGQITKDGEQACLPPLQEYIESATNRRRSLLDAAEQSHQNINNHR 558
I + + L +E ++ TN D ++ Q N+ +
Sbjct: 702 IRDAIDAEEMNKKSKLELSNKKENEQNETNEN----DVHNKTEQQANDQQ 747
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 310 (114.2 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 87/234 (37%), Positives = 122/234 (52%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
EI +++I G +Q +I + I L L+ P ++ + G + PR VL GPPG+GK
Sbjct: 203 EIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTL--GVK------PPRGVLLYGPPGSGK 254
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T AR +AN+ GA + L+ P VMSK GE+E L + F A E + AIIF+D
Sbjct: 255 TCIARAVANETGAFFF----LINGP--EVMSKMAGEAEANLRRAFEEA-EKNSPAIIFID 307
Query: 396 EVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFD 453
E+DS A R+ E RR++S LL +DG + +VVVIAATNR+ +DPAL RFD
Sbjct: 308 EIDSIAPKREKTNGEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFD 367
Query: 454 SMITFGLPDHENRQEIAAQYAKHXXXX---XXXXXXXXXXXMSGRDIRDVCQQA 504
I G+PD R EI + K+ G D+ +C +A
Sbjct: 368 REIDIGVPDDNGRFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEA 421
Score = 247 (92.0 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 78/290 (26%), Positives = 130/290 (44%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+ W++I G D+ K + + IL + P+ ++ KF + R VLF GPPG GKT
Sbjct: 477 VKWDDIGGLDEVKSTLREMILYPIDHPDKFE--------KFGMSPSRGVLFYGPPGCGKT 528
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ +A++ A + + +++ ++GESE + +VF A ++F DE
Sbjct: 529 LLAKAVASECSAN------FVSIKGPELLTMWFGESEANVREVFDKARAAAP-CVLFFDE 581
Query: 397 VDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS R S + + A R+++ LL +IDG K + I ATNR + LD AL+ R
Sbjct: 582 LDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGR 641
Query: 452 FDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRDVCQQAERSW 508
D +I LPD R I + SG D+ ++CQ+A R+
Sbjct: 642 LDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAA 701
Query: 509 ASKIIRGQITKDGEQACLPPLQEYIESATNRRRSLLDAAEQSHQNINNHR 558
I + + L +E ++ TN D ++ Q N+ +
Sbjct: 702 IRDAIDAEEMNKKSKLELSNKKENEQNETNEN----DVHNKTEQQANDQQ 747
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 297 (109.6 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 102/292 (34%), Positives = 138/292 (47%)
Query: 225 RSLITSDKPEIEFIKKGSLTS--EELDALVSVLQL-AGRRIYGLDEPQLNTSKSEISWEN 281
R L T D+ E +K + + + +ALV VL A I L Q K ++ + +
Sbjct: 114 RILSTIDR---ELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQ----KPDVLYSD 166
Query: 282 IAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARV 341
I G D QK+E+ + + L L E+Y I + PR VL GPPG GKT A+
Sbjct: 167 IGGMDIQKQEVREAVELPLTHFELYKQIG--------IDPPRGVLMYGPPGCGKTMLAKA 218
Query: 342 IANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNG-AIIFLDEVDSF 400
+A+ A + V E V KY GE R++ VF LA E N AIIF+DE+D+
Sbjct: 219 VAHHTTA-----AFIRVVGSEFVQ-KYLGEGPRMVRDVFRLAKE--NAPAIIFIDEIDAI 270
Query: 401 AVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSM 455
A R A R RIL LL Q+DGF+Q+ V VI ATNR LDPAL+ R D
Sbjct: 271 ATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLCPGRLDRK 330
Query: 456 ITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
I F LPD ++ + + +SG DI +CQ+A
Sbjct: 331 IEFPLPDRRQKRLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEA 382
>UNIPROTKB|F1NT80 [details] [associations]
symbol:ATAD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0002092
"positive regulation of receptor internalization" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0007612 "learning" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0051967 GO:GO:0045211
GO:GO:0016887 GO:GO:0005778 GO:GO:0002092 OMA:KNENXDR
GeneTree:ENSGT00550000074823 EMBL:AADN02035172 IPI:IPI00593427
Ensembl:ENSGALT00000005787 Uniprot:F1NT80
Length = 363
Score = 286 (105.7 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 81/277 (29%), Positives = 136/277 (49%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
++W +IAG D +++DT++L ++ ++++ +R P+ VL GPPG GKT
Sbjct: 89 VTWNDIAGLDDVITDLKDTVILPIKKKYLFEN----SRLL---QPPKGVLLYGPPGCGKT 141
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ A +AG + + L P + K+YGES++L VFSLA +L +IIF+DE
Sbjct: 142 LIAKATAKEAGC---RFINLQ--P-STLTDKWYGESQKLAAAVFSLAIKL-QPSIIFIDE 194
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK--KVVVIAATNRKQDLDPALISRFDS 454
+DSF +R S HEAT + + + DG + D +V+V+ ATNR QDLD A++ R +
Sbjct: 195 IDSFLRSRSSSDHEATAMMKAQFMSLWDGLDTDYNCQVIVMGATNRPQDLDSAIMRRMPT 254
Query: 455 MITFGLPDHENRQEIAAQYAKHXXXXXXXXX---XXXXXXMSGRDIRDVCQQAERSWASK 511
P + R+ I K+ SG D++++C+ A +
Sbjct: 255 RFHINQPALKQREAILKLILKNENVDRHVDLLQVAKETDGFSGSDLKEMCRDAALLCVRE 314
Query: 512 IIRGQITKDG--EQACLPPLQEYIESATNRRRSLLDA 546
+ ++ E P Q+ + A + R +A
Sbjct: 315 YVNSACEEENRDEDEIRPVQQQDLHRAIEKMRKSKNA 351
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 286 (105.7 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 82/237 (34%), Positives = 123/237 (51%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++ +I G D Q +EI++++ L L PE Y+++ G + P+ V+ GPPGTGKT
Sbjct: 110 TYADIGGLDNQIQEIKESVELPLTHPEYYEEM--GIK------PPKGVILYGPPGTGKTL 161
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
A+ +ANQ A L V E++ KY G+ +L+ ++F +A E P+ I+F+DE
Sbjct: 162 LAKAVANQTSA-----TFLRVVGSELIQ-KYLGDGPKLVRELFRVAEEHAPS--IVFIDE 213
Query: 397 VDSFAVAR-DSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
+D+ R DS E R +L LL Q+DGF+ V VI ATNR + LDPALI
Sbjct: 214 IDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPG 272
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
R D I F LPD + ++ I + +SG DI+ +C +A
Sbjct: 273 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEA 329
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 309 (113.8 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 82/206 (39%), Positives = 116/206 (56%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S +E+ +++I G +Q +I++ + L L+ P ++ I G + PR +L GPPG
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAI--GVK------PPRGILLYGPPG 248
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ GA + L+ P +MSK GESE L K F A E AII
Sbjct: 249 TGKTLIARAVANETGAFFF----LINGP--EIMSKLAGESESNLRKAFEEA-EKNAPAII 301
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--IS 450
F+DE+D+ A R+ E RRI+S LL +DG +Q V+V+AATNR +DPAL
Sbjct: 302 FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKH 476
RFD + G+PD R EI + K+
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKN 387
Score = 289 (106.8 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 81/297 (27%), Positives = 144/297 (48%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++WE+I G + KRE++D + ++ P+ + KF + VLF GPPG GK
Sbjct: 473 QVTWEDIGGLEDVKRELQDLVQYPVEHPDKF--------LKFGMTPSKGVLFYGPPGCGK 524
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IAN+ A + + +++ ++GESE + ++F A + ++F D
Sbjct: 525 TLLAKAIANECQAN------FISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFD 577
Query: 396 EVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
E+DS A AR + + A R+++ +L ++DG K V +I ATNR +DPA++
Sbjct: 578 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 637
Query: 451 RFDSMITFGLPDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERS 507
R D +I LPD ++R I A K SG D+ ++CQ+A +
Sbjct: 638 RLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKL 697
Query: 508 WASKIIRGQITKDGEQACLPPLQEYIES---ATNRRRSLLDAAEQSHQNINNHRTKK 561
+ I +I ++ E+ P E E RR +A + ++++++ +K
Sbjct: 698 AIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 309 (113.8 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 82/206 (39%), Positives = 116/206 (56%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S +E+ +++I G +Q +I++ + L L+ P ++ I G + PR +L GPPG
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAI--GVK------PPRGILLYGPPG 248
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ GA + L+ P +MSK GESE L K F A E AII
Sbjct: 249 TGKTLIARAVANETGAFFF----LINGP--EIMSKLAGESESNLRKAFEEA-EKNAPAII 301
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--IS 450
F+DE+D+ A R+ E RRI+S LL +DG +Q V+V+AATNR +DPAL
Sbjct: 302 FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKH 476
RFD + G+PD R EI + K+
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKN 387
Score = 285 (105.4 bits), Expect = 8.7e-22, P = 8.7e-22
Identities = 80/297 (26%), Positives = 144/297 (48%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++WE+I G + KRE+++ + ++ P+ + KF + VLF GPPG GK
Sbjct: 473 QVTWEDIGGLEDVKRELQELVQYPVEHPDKF--------LKFGMTPSKGVLFYGPPGCGK 524
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IAN+ A + + +++ ++GESE + ++F A + ++F D
Sbjct: 525 TLLAKAIANECQAN------FISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFD 577
Query: 396 EVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
E+DS A AR + + A R+++ +L ++DG K V +I ATNR +DPA++
Sbjct: 578 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 637
Query: 451 RFDSMITFGLPDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERS 507
R D +I LPD ++R I A K SG D+ ++CQ+A +
Sbjct: 638 RLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKL 697
Query: 508 WASKIIRGQITKDGEQACLPPLQEYIES---ATNRRRSLLDAAEQSHQNINNHRTKK 561
+ I +I ++ E+ P E E RR +A + ++++++ +K
Sbjct: 698 AIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 309 (113.8 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 82/206 (39%), Positives = 116/206 (56%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S +E+ +++I G +Q +I++ + L L+ P ++ I G + PR +L GPPG
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAI--GVK------PPRGILLYGPPG 248
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ GA + L+ P +MSK GESE L K F A E AII
Sbjct: 249 TGKTLIARAVANETGAFFF----LINGP--EIMSKLAGESESNLRKAFEEA-EKNAPAII 301
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--IS 450
F+DE+D+ A R+ E RRI+S LL +DG +Q V+V+AATNR +DPAL
Sbjct: 302 FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKH 476
RFD + G+PD R EI + K+
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKN 387
Score = 285 (105.4 bits), Expect = 8.7e-22, P = 8.7e-22
Identities = 80/297 (26%), Positives = 144/297 (48%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++WE+I G + KRE+++ + ++ P+ + KF + VLF GPPG GK
Sbjct: 473 QVTWEDIGGLEDVKRELQELVQYPVEHPDKF--------LKFGMTPSKGVLFYGPPGCGK 524
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IAN+ A + + +++ ++GESE + ++F A + ++F D
Sbjct: 525 TLLAKAIANECQAN------FISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFD 577
Query: 396 EVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
E+DS A AR + + A R+++ +L ++DG K V +I ATNR +DPA++
Sbjct: 578 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 637
Query: 451 RFDSMITFGLPDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERS 507
R D +I LPD ++R I A K SG D+ ++CQ+A +
Sbjct: 638 RLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKL 697
Query: 508 WASKIIRGQITKDGEQACLPPLQEYIES---ATNRRRSLLDAAEQSHQNINNHRTKK 561
+ I +I ++ E+ P E E RR +A + ++++++ +K
Sbjct: 698 AIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 309 (113.8 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 82/206 (39%), Positives = 116/206 (56%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S +E+ +++I G +Q +I++ + L L+ P ++ I G + PR +L GPPG
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAI--GVK------PPRGILLYGPPG 248
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ GA + L+ P +MSK GESE L K F A E AII
Sbjct: 249 TGKTLIARAVANETGAFFF----LINGP--EIMSKLAGESESNLRKAFEEA-EKNAPAII 301
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--IS 450
F+DE+D+ A R+ E RRI+S LL +DG +Q V+V+AATNR +DPAL
Sbjct: 302 FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKH 476
RFD + G+PD R EI + K+
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKN 387
Score = 285 (105.4 bits), Expect = 8.7e-22, P = 8.7e-22
Identities = 80/297 (26%), Positives = 144/297 (48%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++WE+I G + KRE+++ + ++ P+ + KF + VLF GPPG GK
Sbjct: 473 QVTWEDIGGLEDVKRELQELVQYPVEHPDKF--------LKFGMTPSKGVLFYGPPGCGK 524
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IAN+ A + + +++ ++GESE + ++F A + ++F D
Sbjct: 525 TLLAKAIANECQAN------FISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFD 577
Query: 396 EVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
E+DS A AR + + A R+++ +L ++DG K V +I ATNR +DPA++
Sbjct: 578 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 637
Query: 451 RFDSMITFGLPDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERS 507
R D +I LPD ++R I A K SG D+ ++CQ+A +
Sbjct: 638 RLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKL 697
Query: 508 WASKIIRGQITKDGEQACLPPLQEYIES---ATNRRRSLLDAAEQSHQNINNHRTKK 561
+ I +I ++ E+ P E E RR +A + ++++++ +K
Sbjct: 698 AIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 309 (113.8 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 82/206 (39%), Positives = 116/206 (56%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S +E+ +++I G +Q +I++ + L L+ P ++ I G + PR +L GPPG
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAI--GVK------PPRGILLYGPPG 248
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ GA + L+ P +MSK GESE L K F A E AII
Sbjct: 249 TGKTLIARAVANETGAFFF----LINGP--EIMSKLAGESESNLRKAFEEA-EKNAPAII 301
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--IS 450
F+DE+D+ A R+ E RRI+S LL +DG +Q V+V+AATNR +DPAL
Sbjct: 302 FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKH 476
RFD + G+PD R EI + K+
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKN 387
Score = 285 (105.4 bits), Expect = 8.7e-22, P = 8.7e-22
Identities = 80/297 (26%), Positives = 144/297 (48%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++WE+I G + KRE+++ + ++ P+ + KF + VLF GPPG GK
Sbjct: 473 QVTWEDIGGLEDVKRELQELVQYPVEHPDKF--------LKFGMTPSKGVLFYGPPGCGK 524
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IAN+ A + + +++ ++GESE + ++F A + ++F D
Sbjct: 525 TLLAKAIANECQAN------FISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFD 577
Query: 396 EVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
E+DS A AR + + A R+++ +L ++DG K V +I ATNR +DPA++
Sbjct: 578 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 637
Query: 451 RFDSMITFGLPDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERS 507
R D +I LPD ++R I A K SG D+ ++CQ+A +
Sbjct: 638 RLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKL 697
Query: 508 WASKIIRGQITKDGEQACLPPLQEYIES---ATNRRRSLLDAAEQSHQNINNHRTKK 561
+ I +I ++ E+ P E E RR +A + ++++++ +K
Sbjct: 698 AIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 309 (113.8 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 82/206 (39%), Positives = 116/206 (56%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S +E+ +++I G +Q +I++ + L L+ P ++ I G + PR +L GPPG
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAI--GVK------PPRGILLYGPPG 248
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ GA + L+ P +MSK GESE L K F A E AII
Sbjct: 249 TGKTLIARAVANETGAFFF----LINGP--EIMSKLAGESESNLRKAFEEA-EKNAPAII 301
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--IS 450
F+DE+D+ A R+ E RRI+S LL +DG +Q V+V+AATNR +DPAL
Sbjct: 302 FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKH 476
RFD + G+PD R EI + K+
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKN 387
Score = 285 (105.4 bits), Expect = 8.7e-22, P = 8.7e-22
Identities = 80/297 (26%), Positives = 144/297 (48%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++WE+I G + KRE+++ + ++ P+ + KF + VLF GPPG GK
Sbjct: 473 QVTWEDIGGLEDVKRELQELVQYPVEHPDKF--------LKFGMTPSKGVLFYGPPGCGK 524
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IAN+ A + + +++ ++GESE + ++F A + ++F D
Sbjct: 525 TLLAKAIANECQAN------FISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFD 577
Query: 396 EVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
E+DS A AR + + A R+++ +L ++DG K V +I ATNR +DPA++
Sbjct: 578 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 637
Query: 451 RFDSMITFGLPDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERS 507
R D +I LPD ++R I A K SG D+ ++CQ+A +
Sbjct: 638 RLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKL 697
Query: 508 WASKIIRGQITKDGEQACLPPLQEYIES---ATNRRRSLLDAAEQSHQNINNHRTKK 561
+ I +I ++ E+ P E E RR +A + ++++++ +K
Sbjct: 698 AIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 309 (113.8 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 82/206 (39%), Positives = 116/206 (56%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S +E+ +++I G +Q +I++ + L L+ P ++ I G + PR +L GPPG
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAI--GVK------PPRGILLYGPPG 248
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ GA + L+ P +MSK GESE L K F A E AII
Sbjct: 249 TGKTLIARAVANETGAFFF----LINGP--EIMSKLAGESESNLRKAFEEA-EKNAPAII 301
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--IS 450
F+DE+D+ A R+ E RRI+S LL +DG +Q V+V+AATNR +DPAL
Sbjct: 302 FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKH 476
RFD + G+PD R EI + K+
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKN 387
Score = 285 (105.4 bits), Expect = 8.7e-22, P = 8.7e-22
Identities = 81/299 (27%), Positives = 145/299 (48%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++WE+I G + KRE+++ + ++ P+ + KF + VLF GPPG GK
Sbjct: 473 QVTWEDIGGLEDVKRELQELVQYPVEHPDKF--------LKFGMTPSKGVLFYGPPGCGK 524
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IAN+ A + + +++ ++GESE + ++F A + ++F D
Sbjct: 525 TLLAKAIANECQAN------FISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFD 577
Query: 396 EVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
E+DS A AR + + A R+++ +L ++DG K V +I ATNR +DPA++
Sbjct: 578 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 637
Query: 451 RFDSMITFGLPDHENRQEIA-AQYAKHXXXXXXXXXXXXXXXM----SGRDIRDVCQQAE 505
R D +I LPD ++R I A K M SG D+ ++CQ+A
Sbjct: 638 RLDQLIYIPLPDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRAC 697
Query: 506 RSWASKIIRGQITKDGEQACLPPLQEYIES---ATNRRRSLLDAAEQSHQNINNHRTKK 561
+ + I +I ++ E+ P E E RR +A + ++++++ +K
Sbjct: 698 KLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 756
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 309 (113.8 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 82/206 (39%), Positives = 116/206 (56%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S +E+ +++I G +Q +I++ + L L+ P ++ I G + PR +L GPPG
Sbjct: 213 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAI--GVK------PPRGILLYGPPG 264
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ GA + L+ P +MSK GESE L K F A E AII
Sbjct: 265 TGKTLIARAVANETGAFFF----LINGP--EIMSKLAGESESNLRKAFEEA-EKNAPAII 317
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--IS 450
F+DE+D+ A R+ E RRI+S LL +DG +Q V+V+AATNR +DPAL
Sbjct: 318 FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 377
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKH 476
RFD + G+PD R EI + K+
Sbjct: 378 RFDREVDIGIPDATGRLEILQIHTKN 403
Score = 285 (105.4 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 80/297 (26%), Positives = 144/297 (48%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++WE+I G + KRE+++ + ++ P+ + KF + VLF GPPG GK
Sbjct: 489 QVTWEDIGGLEDVKRELQELVQYPVEHPDKF--------LKFGMTPSKGVLFYGPPGCGK 540
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IAN+ A + + +++ ++GESE + ++F A + ++F D
Sbjct: 541 TLLAKAIANECQAN------FISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFD 593
Query: 396 EVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
E+DS A AR + + A R+++ +L ++DG K V +I ATNR +DPA++
Sbjct: 594 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 653
Query: 451 RFDSMITFGLPDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERS 507
R D +I LPD ++R I A K SG D+ ++CQ+A +
Sbjct: 654 RLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKL 713
Query: 508 WASKIIRGQITKDGEQACLPPLQEYIES---ATNRRRSLLDAAEQSHQNINNHRTKK 561
+ I +I ++ E+ P E E RR +A + ++++++ +K
Sbjct: 714 AIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 770
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 285 (105.4 bits), Expect = 2.1e-24, P = 2.1e-24
Identities = 86/276 (31%), Positives = 132/276 (47%)
Query: 238 IKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTIL 297
+K G+ + ++ L ++++ R + L + +S+ I G +Q RE+ + I
Sbjct: 84 LKPGTRVALDMTTL-TIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIE 142
Query: 298 LSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLM 357
L L +PE++ + P+ L GPPGTGKT AR +A+Q +
Sbjct: 143 LPLTNPELFQRVG--------IIPPKGCLLYGPPGTGKTLLARAVASQLDCN------FL 188
Query: 358 YVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI-- 415
V ++ KY GES RL+ ++F+ A + IIF+DE+D+ R SE A R I
Sbjct: 189 KVVSSSIVDKYIGESARLIREMFNYARD-HQPCIIFMDEIDAIGGRRFSEGTSADREIQR 247
Query: 416 -LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI--- 469
L LL Q+DGF+ +V +I ATNR LDPAL+ R D I LP+ + R +I
Sbjct: 248 TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 307
Query: 470 -AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
A KH +G D+R+VC +A
Sbjct: 308 HAGPITKHGEIDYEAIVKLSDG-FNGADLRNVCTEA 342
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 295 (108.9 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 102/292 (34%), Positives = 138/292 (47%)
Query: 225 RSLITSDKPEIEFIKKGSLTS--EELDALVSVLQL-AGRRIYGLDEPQLNTSKSEISWEN 281
R L T D+ E +K + + + +ALV VL A I L Q K ++ + +
Sbjct: 113 RILSTIDR---ELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQ----KPDVMYAD 165
Query: 282 IAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARV 341
I G D QK+E+ + + L L E+Y I + PR VL GPPG GKT A+
Sbjct: 166 IGGMDIQKQEVREAVELPLTHFELYKQIG--------IDPPRGVLMYGPPGCGKTMLAKA 217
Query: 342 IANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNG-AIIFLDEVDSF 400
+A+ A + V E V KY GE R++ VF LA E N AIIF+DE+D+
Sbjct: 218 VAHHTTA-----AFIRVVGSEFVQ-KYLGEGPRMVRDVFRLAKE--NAPAIIFIDEIDAI 269
Query: 401 AVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSM 455
A R A R RIL LL Q+DGF+Q+ V VI ATNR LDPAL+ R D
Sbjct: 270 ATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRK 329
Query: 456 ITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
I F LPD ++ I + +SG DI +CQ++
Sbjct: 330 IEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQES 381
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 295 (108.9 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 102/292 (34%), Positives = 138/292 (47%)
Query: 225 RSLITSDKPEIEFIKKGSLTS--EELDALVSVLQL-AGRRIYGLDEPQLNTSKSEISWEN 281
R L T D+ E +K + + + +ALV VL A I L Q K ++ + +
Sbjct: 114 RILSTIDR---ELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQ----KPDVMYAD 166
Query: 282 IAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARV 341
I G D QK+E+ + + L L E+Y I + PR VL GPPG GKT A+
Sbjct: 167 IGGMDIQKQEVREAVELPLTHFELYKQIG--------IDPPRGVLMYGPPGCGKTMLAKA 218
Query: 342 IANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNG-AIIFLDEVDSF 400
+A+ A + V E V KY GE R++ VF LA E N AIIF+DE+D+
Sbjct: 219 VAHHTTA-----AFIRVVGSEFVQ-KYLGEGPRMVRDVFRLAKE--NAPAIIFIDEIDAI 270
Query: 401 AVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSM 455
A R A R RIL LL Q+DGF+Q+ V VI ATNR LDPAL+ R D
Sbjct: 271 ATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRK 330
Query: 456 ITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
I F LPD ++ I + +SG DI +CQ++
Sbjct: 331 IEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQES 382
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 295 (108.9 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 102/292 (34%), Positives = 138/292 (47%)
Query: 225 RSLITSDKPEIEFIKKGSLTS--EELDALVSVLQL-AGRRIYGLDEPQLNTSKSEISWEN 281
R L T D+ E +K + + + +ALV VL A I L Q K ++ + +
Sbjct: 114 RILSTIDR---ELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQ----KPDVMYAD 166
Query: 282 IAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARV 341
I G D QK+E+ + + L L E+Y I + PR VL GPPG GKT A+
Sbjct: 167 IGGMDIQKQEVREAVELPLTHFELYKQIG--------IDPPRGVLMYGPPGCGKTMLAKA 218
Query: 342 IANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNG-AIIFLDEVDSF 400
+A+ A + V E V KY GE R++ VF LA E N AIIF+DE+D+
Sbjct: 219 VAHHTTA-----AFIRVVGSEFVQ-KYLGEGPRMVRDVFRLAKE--NAPAIIFIDEIDAI 270
Query: 401 AVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSM 455
A R A R RIL LL Q+DGF+Q+ V VI ATNR LDPAL+ R D
Sbjct: 271 ATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRK 330
Query: 456 ITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
I F LPD ++ I + +SG DI +CQ++
Sbjct: 331 IEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQES 382
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 295 (108.9 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 102/292 (34%), Positives = 138/292 (47%)
Query: 225 RSLITSDKPEIEFIKKGSLTS--EELDALVSVLQL-AGRRIYGLDEPQLNTSKSEISWEN 281
R L T D+ E +K + + + +ALV VL A I L Q K ++ + +
Sbjct: 114 RILSTIDR---ELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQ----KPDVMYAD 166
Query: 282 IAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARV 341
I G D QK+E+ + + L L E+Y I + PR VL GPPG GKT A+
Sbjct: 167 IGGMDIQKQEVREAVELPLTHFELYKQIG--------IDPPRGVLMYGPPGCGKTMLAKA 218
Query: 342 IANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNG-AIIFLDEVDSF 400
+A+ A + V E V KY GE R++ VF LA E N AIIF+DE+D+
Sbjct: 219 VAHHTTA-----AFIRVVGSEFVQ-KYLGEGPRMVRDVFRLAKE--NAPAIIFIDEIDAI 270
Query: 401 AVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSM 455
A R A R RIL LL Q+DGF+Q+ V VI ATNR LDPAL+ R D
Sbjct: 271 ATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRK 330
Query: 456 ITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
I F LPD ++ I + +SG DI +CQ++
Sbjct: 331 IEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQES 382
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 295 (108.9 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 102/292 (34%), Positives = 138/292 (47%)
Query: 225 RSLITSDKPEIEFIKKGSLTS--EELDALVSVLQL-AGRRIYGLDEPQLNTSKSEISWEN 281
R L T D+ E +K + + + +ALV VL A I L Q K ++ + +
Sbjct: 114 RILSTIDR---ELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQ----KPDVMYAD 166
Query: 282 IAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARV 341
I G D QK+E+ + + L L E+Y I + PR VL GPPG GKT A+
Sbjct: 167 IGGMDIQKQEVREAVELPLTHFELYKQIG--------IDPPRGVLMYGPPGCGKTMLAKA 218
Query: 342 IANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNG-AIIFLDEVDSF 400
+A+ A + V E V KY GE R++ VF LA E N AIIF+DE+D+
Sbjct: 219 VAHHTTA-----AFIRVVGSEFVQ-KYLGEGPRMVRDVFRLAKE--NAPAIIFIDEIDAI 270
Query: 401 AVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSM 455
A R A R RIL LL Q+DGF+Q+ V VI ATNR LDPAL+ R D
Sbjct: 271 ATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRK 330
Query: 456 ITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
I F LPD ++ I + +SG DI +CQ++
Sbjct: 331 IEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQES 382
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 295 (108.9 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 102/292 (34%), Positives = 138/292 (47%)
Query: 225 RSLITSDKPEIEFIKKGSLTS--EELDALVSVLQL-AGRRIYGLDEPQLNTSKSEISWEN 281
R L T D+ E +K + + + +ALV VL A I L Q K ++ + +
Sbjct: 114 RILSTIDR---ELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQ----KPDVMYAD 166
Query: 282 IAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARV 341
I G D QK+E+ + + L L E+Y I + PR VL GPPG GKT A+
Sbjct: 167 IGGMDIQKQEVREAVELPLTHFELYKQIG--------IDPPRGVLMYGPPGCGKTMLAKA 218
Query: 342 IANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNG-AIIFLDEVDSF 400
+A+ A + V E V KY GE R++ VF LA E N AIIF+DE+D+
Sbjct: 219 VAHHTTA-----AFIRVVGSEFVQ-KYLGEGPRMVRDVFRLAKE--NAPAIIFIDEIDAI 270
Query: 401 AVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSM 455
A R A R RIL LL Q+DGF+Q+ V VI ATNR LDPAL+ R D
Sbjct: 271 ATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRK 330
Query: 456 ITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
I F LPD ++ I + +SG DI +CQ++
Sbjct: 331 IEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQES 382
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 295 (108.9 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 102/292 (34%), Positives = 138/292 (47%)
Query: 225 RSLITSDKPEIEFIKKGSLTS--EELDALVSVLQL-AGRRIYGLDEPQLNTSKSEISWEN 281
R L T D+ E +K + + + +ALV VL A I L Q K ++ + +
Sbjct: 114 RILSTIDR---ELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQ----KPDVMYAD 166
Query: 282 IAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARV 341
I G D QK+E+ + + L L E+Y I + PR VL GPPG GKT A+
Sbjct: 167 IGGMDIQKQEVREAVELPLTHFELYKQIG--------IDPPRGVLMYGPPGCGKTMLAKA 218
Query: 342 IANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNG-AIIFLDEVDSF 400
+A+ A + V E V KY GE R++ VF LA E N AIIF+DE+D+
Sbjct: 219 VAHHTTA-----AFIRVVGSEFVQ-KYLGEGPRMVRDVFRLAKE--NAPAIIFIDEIDAI 270
Query: 401 AVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSM 455
A R A R RIL LL Q+DGF+Q+ V VI ATNR LDPAL+ R D
Sbjct: 271 ATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRK 330
Query: 456 ITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
I F LPD ++ I + +SG DI +CQ++
Sbjct: 331 IEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQES 382
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 291 (107.5 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 86/239 (35%), Positives = 116/239 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K S+ +I G D QK+E+ + + L L +Y I + PR VL GPPGT
Sbjct: 144 KPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIG--------IDPPRGVLLYGPPGT 195
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT A+ +A+ A + V E V KY GE RL+ VF LA E + AIIF
Sbjct: 196 GKTMLAKAVAHHTSA-----AFIRVVGSEFVQ-KYLGEGPRLVRDVFRLARE-NSPAIIF 248
Query: 394 LDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI- 449
+DE+D+ A R A R RIL LL Q+DGF+ V VI ATNR+ LDPAL+
Sbjct: 249 IDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLR 308
Query: 450 -SRFDSMITFGLPDHENRQ---EIAAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
R D I F LPD ++ ++ +SG +I+ +CQ+A
Sbjct: 309 PGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEA 367
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 287 (106.1 bits), Expect = 3.7e-24, P = 3.7e-24
Identities = 88/273 (32%), Positives = 130/273 (47%)
Query: 241 GSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLSL 300
G+ + +L L ++L++ R + + S +S+ I G Q RE+ + + L L
Sbjct: 99 GARVTLDLTTL-TILKILPREVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVELPL 157
Query: 301 QSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVP 360
PE++ I G + P+ VL GPPGTGKT AR IA+ A + V
Sbjct: 158 MIPELF--IRVGIKA------PKGVLLYGPPGTGKTLLARAIASNLEAN------FLKVV 203
Query: 361 LEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI---LS 417
++ KY GES R++ ++F A + +IF+DE+D+ R SE A R I L
Sbjct: 204 SSAIVDKYIGESARVIREMFGYARD-HQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLM 262
Query: 418 VLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI----AA 471
LL Q+DGF+ KV +I ATNR LDPAL+ R D I LP+ R ++ AA
Sbjct: 263 ELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAA 322
Query: 472 QYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
KH + D+R+VC +A
Sbjct: 323 NITKHGDVDYEAIAKLADG-FNAADLRNVCTEA 354
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 285 (105.4 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 86/276 (31%), Positives = 132/276 (47%)
Query: 238 IKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTIL 297
+K G+ + ++ L ++++ R + L + +S+ I G +Q RE+ + I
Sbjct: 92 LKPGTRVALDMTTL-TIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIE 150
Query: 298 LSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLM 357
L L +PE++ + P+ L GPPGTGKT AR +A+Q +
Sbjct: 151 LPLTNPELFQRVG--------IIPPKGCLLYGPPGTGKTLLARAVASQLDCN------FL 196
Query: 358 YVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI-- 415
V ++ KY GES RL+ ++F+ A + IIF+DE+D+ R SE A R I
Sbjct: 197 KVVSSSIVDKYIGESARLIREMFNYARD-HQPCIIFMDEIDAIGGRRFSEGTSADREIQR 255
Query: 416 -LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI--- 469
L LL Q+DGF+ +V +I ATNR LDPAL+ R D I LP+ + R +I
Sbjct: 256 TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 315
Query: 470 -AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
A KH +G D+R+VC +A
Sbjct: 316 HAGPITKHGEIDYEAIVKLSDG-FNGADLRNVCTEA 350
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 285 (105.4 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 86/276 (31%), Positives = 132/276 (47%)
Query: 238 IKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTIL 297
+K G+ + ++ L ++++ R + L + +S+ I G +Q RE+ + I
Sbjct: 92 LKPGTRVALDMTTL-TIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIE 150
Query: 298 LSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLM 357
L L +PE++ + P+ L GPPGTGKT AR +A+Q +
Sbjct: 151 LPLTNPELFQRVG--------IIPPKGCLLYGPPGTGKTLLARAVASQLDCN------FL 196
Query: 358 YVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI-- 415
V ++ KY GES RL+ ++F+ A + IIF+DE+D+ R SE A R I
Sbjct: 197 KVVSSSIVDKYIGESARLIREMFNYARD-HQPCIIFMDEIDAIGGRRFSEGTSADREIQR 255
Query: 416 -LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI--- 469
L LL Q+DGF+ +V +I ATNR LDPAL+ R D I LP+ + R +I
Sbjct: 256 TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 315
Query: 470 -AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
A KH +G D+R+VC +A
Sbjct: 316 HAGPITKHGEIDYEAIVKLSDG-FNGADLRNVCTEA 350
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 285 (105.4 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 86/276 (31%), Positives = 132/276 (47%)
Query: 238 IKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTIL 297
+K G+ + ++ L ++++ R + L + +S+ I G +Q RE+ + I
Sbjct: 92 LKPGTRVALDMTTL-TIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIE 150
Query: 298 LSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLM 357
L L +PE++ + P+ L GPPGTGKT AR +A+Q +
Sbjct: 151 LPLTNPELFQRVG--------IIPPKGCLLYGPPGTGKTLLARAVASQLDCN------FL 196
Query: 358 YVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI-- 415
V ++ KY GES RL+ ++F+ A + IIF+DE+D+ R SE A R I
Sbjct: 197 KVVSSSIVDKYIGESARLIREMFNYARD-HQPCIIFMDEIDAIGGRRFSEGTSADREIQR 255
Query: 416 -LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI--- 469
L LL Q+DGF+ +V +I ATNR LDPAL+ R D I LP+ + R +I
Sbjct: 256 TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 315
Query: 470 -AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
A KH +G D+R+VC +A
Sbjct: 316 HAGPITKHGEIDYEAIVKLSDG-FNGADLRNVCTEA 350
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 285 (105.4 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 86/276 (31%), Positives = 132/276 (47%)
Query: 238 IKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTIL 297
+K G+ + ++ L ++++ R + L + +S+ I G +Q RE+ + I
Sbjct: 92 LKPGTRVALDMTTL-TIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIE 150
Query: 298 LSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLM 357
L L +PE++ + P+ L GPPGTGKT AR +A+Q +
Sbjct: 151 LPLTNPELFQRVG--------IIPPKGCLLYGPPGTGKTLLARAVASQLDCN------FL 196
Query: 358 YVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI-- 415
V ++ KY GES RL+ ++F+ A + IIF+DE+D+ R SE A R I
Sbjct: 197 KVVSSSIVDKYIGESARLIREMFNYARD-HQPCIIFMDEIDAIGGRRFSEGTSADREIQR 255
Query: 416 -LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI--- 469
L LL Q+DGF+ +V +I ATNR LDPAL+ R D I LP+ + R +I
Sbjct: 256 TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 315
Query: 470 -AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
A KH +G D+R+VC +A
Sbjct: 316 HAGPITKHGEIDYEAIVKLSDG-FNGADLRNVCTEA 350
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 296 (109.3 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 87/275 (31%), Positives = 135/275 (49%)
Query: 238 IKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTIL 297
+KKG + ++ L +++++ R L + + EI+++ I G +Q RE+ + I
Sbjct: 140 LKKGVRVTLDITTL-TIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIE 198
Query: 298 LSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLM 357
L L++PE++ + G + P+ VL GPPGTGKT A+ +A GA +
Sbjct: 199 LPLKNPEIFQRV--GIK------PPKGVLLYGPPGTGKTLLAKAVAATIGAN------FI 244
Query: 358 YVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI-- 415
+ P ++ KY GES R++ ++F+ A E IIF+DEVD+ R SE A R I
Sbjct: 245 FSPASGIVDKYIGESARIIREMFAYAKE-HEPCIIFMDEVDAIGGRRFSEGTSADREIQR 303
Query: 416 -LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQ 472
L LL Q+DGF+ + +I ATNR LDPAL+ R D + LP+ R EI
Sbjct: 304 TLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKI 363
Query: 473 YA---KHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
+ K +G DIR+ +A
Sbjct: 364 HTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEA 398
>POMBASE|SPCC24B10.10c [details] [associations]
symbol:yta4 "mitochondrial outer membrane ATPase
Msp1/Yta4 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=ISS] [GO:0006626 "protein targeting to mitochondrion"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPCC24B10.10c
GO:GO:0005524 GO:GO:0006626 GO:GO:0005741 EMBL:CU329672
GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000225141
OMA:VINPLHI OrthoDB:EOG4BVW3J PIR:T50417 RefSeq:NP_588013.1
ProteinModelPortal:Q9P7J5 EnsemblFungi:SPCC24B10.10c.1
GeneID:2539116 KEGG:spo:SPCC24B10.10c NextBio:20800288
Uniprot:Q9P7J5
Length = 355
Score = 281 (104.0 bits), Expect = 5.7e-24, P = 5.7e-24
Identities = 72/236 (30%), Positives = 120/236 (50%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S+ ++S+++I G D+ ++ +L L+ PEV+D C P+ +L GPPG
Sbjct: 82 SEIDVSFDDIGGMDEHVNQLLQDVLFPLKYPEVFDTHGGLLSC------PKGLLLYGPPG 135
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
GKT A+ +A Q+ A + V + ++ K++GES +L+ +F+LA +L II
Sbjct: 136 CGKTMLAKALAKQSQAT------FINVSVGLLTDKWFGESNKLVDALFTLARKL-EPTII 188
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGF-EQDKKVVVIAATNRKQDLDPALISR 451
F+DE+D+F R HEA +I + + DG +V+V+ ATNR D+D A+ R
Sbjct: 189 FIDEIDTFLRQRQRTDHEAMAQIKAEFMSMWDGLLSGQSRVLVLGATNRPADIDEAIRRR 248
Query: 452 FDSMITFGLPDHENRQEIAAQYAKHXXXXXXXX---XXXXXXXMSGRDIRDVCQQA 504
+ + LP+ E R++I Y K +SG I++VC+ A
Sbjct: 249 MPKVFSIPLPNAEQRRKILELYLKKVPLEANFDWNGVVNATAGLSGSYIKEVCRSA 304
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 303 (111.7 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 96/340 (28%), Positives = 164/340 (48%)
Query: 209 SGDMNAREG-DLCILIFRSLITSDKPEIEFIKKGSLTSEELDA-LVSVLQLAG---RRIY 263
S D + G DL L + + + +++ I L EE+DA +++ + ++ +
Sbjct: 404 SKDTHGYVGADLAALCTEAALQCIREKMDVI---DLDDEEIDAEILNSMAVSNDHFQTAL 460
Query: 264 GLDEPQ-LNTSKSEI---SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFES 319
G P L + E+ SWE+I G + KRE+++T+ ++ PE ++ KF
Sbjct: 461 GNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFE--------KFGM 512
Query: 320 NRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKV 379
+ + VLF GPPG GKT A+ IAN+ A + + +++ ++GESE + ++
Sbjct: 513 SPSKGVLFYGPPGCGKTLLAKAIANECQAN------FISIKGPELLTMWFGESEANVREI 566
Query: 380 FSLANELPNGAIIFLDEVDSFAVARDSEMHEA---TRRILSVLLRQIDGFEQDKKVVVIA 436
F A + ++F DE+DS A R + + +A R+L+ LL ++DG K V +I
Sbjct: 567 FDKARQSAP-CVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIG 625
Query: 437 ATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXX---XXXXXXXX 491
ATNR +DPAL+ R D +I LPD E+R +I +
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQG 685
Query: 492 MSGRDIRDVCQQAERSWASKIIRGQITKDGEQACLPPLQE 531
SG DI ++CQ++ + + I I K+ ++A P E
Sbjct: 686 FSGADITEICQRSCKYAIRENIEKDIEKERKRAESPEAME 725
Score = 293 (108.2 bits), Expect = 4.8e-22, Sum P(2) = 4.8e-22
Identities = 74/203 (36%), Positives = 109/203 (53%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
E+ ++++ G +Q +I + + L L+ P+++ I G + P+ +L GPPG+GK
Sbjct: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSI--GVK------PPKGILLYGPPGSGK 255
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T AR +AN+ GA + +MSK GESE L K F A E +IIF+D
Sbjct: 256 TLIARAVANETGAF------FFCINGPEIMSKLAGESESNLRKAFEEA-EKNAPSIIFID 308
Query: 396 EVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFD 453
E+DS A R+ E RRI+S LL +DG + V+V+ ATNR +DPAL RFD
Sbjct: 309 EIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFD 368
Query: 454 SMITFGLPDHENRQEIAAQYAKH 476
I G+PD R E+ + K+
Sbjct: 369 REIDIGVPDEIGRLEVLRIHTKN 391
Score = 39 (18.8 bits), Expect = 4.8e-22, Sum P(2) = 4.8e-22
Identities = 11/56 (19%), Positives = 25/56 (44%)
Query: 498 RDVCQQAERSWASKIIRGQITKDGEQACLPPLQEYIESATNRRRSLLDAAEQSHQN 553
+DV +A + IT+ +++C ++E IE + R ++ E ++
Sbjct: 672 KDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKERKRAESPEAMEED 727
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 302 (111.4 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 91/251 (36%), Positives = 129/251 (51%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S ++I +++I G +Q +I++ + L L+ P ++ I G + PR +L GPPG
Sbjct: 199 SLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAI--GVK------PPRGILLYGPPG 250
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ GA + L+ P +MSK GESE L K F A E AII
Sbjct: 251 TGKTLVARAVANETGAFFF----LINGP--EIMSKLAGESESNLRKAFEEA-EKNAPAII 303
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--IS 450
F+DE+D+ A R+ E RRI+S LL +DG +Q VVV+AATNR +D AL
Sbjct: 304 FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFG 363
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXMSGR---DIRDVCQQAERS 507
RFD I G+PD R EI + K+ G D+ +C +A
Sbjct: 364 RFDREIDIGIPDSTGRLEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEA--- 420
Query: 508 WASKIIRGQIT 518
A + IR ++T
Sbjct: 421 -ALQAIRKKMT 430
Score = 272 (100.8 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 76/255 (29%), Positives = 124/255 (48%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
++WE+I G D+ KRE+++ + ++ P+ + KF R VLF GPPG GKT
Sbjct: 476 VNWEDIGGLDEVKRELQELVQYPVEYPDKF--------LKFGMTPSRGVLFYGPPGCGKT 527
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ IAN+ A + + +++ ++GESE + VF A + I+F DE
Sbjct: 528 LLAKAIANECQAN------FVSIKGPELLTMWFGESEANVRDVFDKARQAAP-CILFFDE 580
Query: 397 VDSFAVARDSEMHEA---TRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS A AR +A R+++ +L ++DG K V +I ATNR +DPA++ R
Sbjct: 581 LDSIAKARGGGAGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGR 640
Query: 452 FDSMITFGLPDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERSW 508
D +I LPD +R I A K SG D+ ++CQ+A +
Sbjct: 641 LDQLIYIPLPDMPSRTAILRANLRKSPVAKDVDLMYLSKITEGFSGADLTEICQRACKLA 700
Query: 509 ASKIIRGQITKDGEQ 523
+ I +I + ++
Sbjct: 701 IREAIEAEIRAERQR 715
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 285 (105.4 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 90/291 (30%), Positives = 141/291 (48%)
Query: 238 IKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTIL 297
+K+G+ + ++ L +++++ R + L +I++ I G + Q RE+ + I
Sbjct: 96 LKQGTRVALDMTTL-TIMRMLPREVDPLVYNMSLEDPGQINFAGIGGLNDQIRELREVIE 154
Query: 298 LSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLM 357
L L++PE++ + G + P+ VL GPPGTGKT AR +A+ +
Sbjct: 155 LPLKNPELFQRV--GIK------PPKGVLLYGPPGTGKTLLARAVASS------METNFL 200
Query: 358 YVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI-- 415
V ++ KY GES RL+ ++F A E IIF+DE+D+ R SE A R I
Sbjct: 201 KVVSSAIVDKYIGESARLIREMFGYAKE-HEPCIIFMDEIDAIGGRRFSEGTSADREIQR 259
Query: 416 -LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQ 472
L LL Q+DGF+ K +I ATNR LDPAL+ R D I LP+ R EI
Sbjct: 260 TLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVGRLEILKI 319
Query: 473 YA---KHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQITKD 520
++ + ++G D+R+V +A +A K R I +D
Sbjct: 320 HSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTEAGL-FAIKDYRDAINQD 369
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 291 (107.5 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 89/277 (32%), Positives = 138/277 (49%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K +I+++++ G +Q ++ + + + L PE + ++ + P+ VL GPPGT
Sbjct: 164 KPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLG--------IDPPKGVLMYGPPGT 215
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ +F +A IIF
Sbjct: 216 GKTLCARAVANRTDA-----AFVRVIGSELVQ-KYVGEGARMVRDLFQMARS-KKACIIF 268
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DEVD+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 269 FDEVDAIGGARFDDGAGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALL 327
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D + FGLPD E R I +AK +G DIR VC +A
Sbjct: 328 RPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEA 387
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R ++ KD +A ++ Y + SAT+R
Sbjct: 388 GM-FAIRARRKVVSEKDFLEAIDKVIKSYAKFSATSR 423
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 287 (106.1 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 86/276 (31%), Positives = 133/276 (48%)
Query: 238 IKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTIL 297
+K G+ + ++ L ++++ R + L + ++S+ I G +Q RE+ + I
Sbjct: 106 LKPGTRVALDMTTL-TIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELREVIE 164
Query: 298 LSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLM 357
L L +PE++ + P+ L GPPGTGKT AR +A+Q +
Sbjct: 165 LPLTNPELFQRVG--------IIPPKGCLLYGPPGTGKTLLARAVASQLDCN------FL 210
Query: 358 YVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI-- 415
V ++ KY GES RL+ ++F+ A + IIF+DE+D+ R SE A R I
Sbjct: 211 KVVSSSIVDKYIGESARLIREMFNYARD-HQPCIIFMDEIDAIGGRRFSEGTSADREIQR 269
Query: 416 -LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI--- 469
L LL Q+DGF+ +V +I ATNR LDPAL+ R D I LP+ + R +I
Sbjct: 270 TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 329
Query: 470 -AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
A KH +G D+R+VC +A
Sbjct: 330 HAGPITKHGEIDYEAIVKLSDG-FNGADLRNVCTEA 364
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 285 (105.4 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 86/276 (31%), Positives = 132/276 (47%)
Query: 238 IKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTIL 297
+K G+ + ++ L ++++ R + L + +S+ I G +Q RE+ + I
Sbjct: 98 LKPGTRVALDMTTL-TIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIE 156
Query: 298 LSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLM 357
L L +PE++ + P+ L GPPGTGKT AR +A+Q +
Sbjct: 157 LPLTNPELFQRVG--------IIPPKGCLLYGPPGTGKTLLARAVASQLDCN------FL 202
Query: 358 YVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI-- 415
V ++ KY GES RL+ ++F+ A + IIF+DE+D+ R SE A R I
Sbjct: 203 KVVSSSIVDKYIGESARLIREMFNYARD-HQPCIIFMDEIDAIGGRRFSEGTSADREIQR 261
Query: 416 -LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI--- 469
L LL Q+DGF+ +V +I ATNR LDPAL+ R D I LP+ + R +I
Sbjct: 262 TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 321
Query: 470 -AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
A KH +G D+R+VC +A
Sbjct: 322 HAGPITKHGEIDYEAIVKLSDG-FNGADLRNVCTEA 356
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 288 (106.4 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 93/261 (35%), Positives = 129/261 (49%)
Query: 223 IFRSLITSDKPEIEFIKKGSLTS--EELDALVSVLQL-AGRRIYGLDEPQLNTSKSEISW 279
+ R L T D+ E +K S + +ALV +L A I + E Q K ++++
Sbjct: 102 VVRILSTLDR---ELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQ----KPDVTY 154
Query: 280 ENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCA 339
++ G D QK+EI++ + L L ++Y I + PR VL GPPGTGKT
Sbjct: 155 ADVGGLDMQKQEIKEAVELPLTQGDLYSQIG--------IDPPRGVLLYGPPGTGKTMLV 206
Query: 340 RVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDS 399
+ +AN A + + + KY GE R++ VF LA E + AIIF+DE+D+
Sbjct: 207 KAVANSTTAS------FIRINGSEFVQKYLGEGPRMVRDVFRLARE-NSPAIIFIDEIDA 259
Query: 400 FAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDS 454
A R A R RIL LL Q+DGF+Q V VI ATNR LDPAL+ R D
Sbjct: 260 IATKRFDAQTGADREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDR 319
Query: 455 MITF-GLPDHENRQEIAAQYA 474
I F L D R+ I + A
Sbjct: 320 KIEFPSLKDRRERRLIFSTIA 340
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 288 (106.4 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 93/261 (35%), Positives = 129/261 (49%)
Query: 223 IFRSLITSDKPEIEFIKKGSLTS--EELDALVSVLQL-AGRRIYGLDEPQLNTSKSEISW 279
+ R L T D+ E +K S + +ALV +L A I + E Q K ++++
Sbjct: 102 VVRILSTLDR---ELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQ----KPDVTY 154
Query: 280 ENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCA 339
++ G D QK+EI++ + L L ++Y I + PR VL GPPGTGKT
Sbjct: 155 ADVGGLDMQKQEIKEAVELPLTQGDLYSQIG--------IDPPRGVLLYGPPGTGKTMLV 206
Query: 340 RVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDS 399
+ +AN A + + + KY GE R++ VF LA E + AIIF+DE+D+
Sbjct: 207 KAVANSTTAS------FIRINGSEFVQKYLGEGPRMVRDVFRLARE-NSPAIIFIDEIDA 259
Query: 400 FAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDS 454
A R A R RIL LL Q+DGF+Q V VI ATNR LDPAL+ R D
Sbjct: 260 IATKRFDAQTGADREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDR 319
Query: 455 MITF-GLPDHENRQEIAAQYA 474
I F L D R+ I + A
Sbjct: 320 KIEFPSLKDRRERRLIFSTIA 340
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 285 (105.4 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 86/276 (31%), Positives = 132/276 (47%)
Query: 238 IKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTIL 297
+K G+ + ++ L ++++ R + L + +S+ I G +Q RE+ + I
Sbjct: 106 LKPGTRVALDMTTL-TIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIE 164
Query: 298 LSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLM 357
L L +PE++ + P+ L GPPGTGKT AR +A+Q +
Sbjct: 165 LPLTNPELFQRVG--------IIPPKGCLLYGPPGTGKTLLARAVASQLDCN------FL 210
Query: 358 YVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI-- 415
V ++ KY GES RL+ ++F+ A + IIF+DE+D+ R SE A R I
Sbjct: 211 KVVSSSIVDKYIGESARLIREMFNYARD-HQPCIIFMDEIDAIGGRRFSEGTSADREIQR 269
Query: 416 -LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI--- 469
L LL Q+DGF+ +V +I ATNR LDPAL+ R D I LP+ + R +I
Sbjct: 270 TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 329
Query: 470 -AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
A KH +G D+R+VC +A
Sbjct: 330 HAGPITKHGEIDYEAIVKLSDG-FNGADLRNVCTEA 364
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 285 (105.4 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 86/276 (31%), Positives = 132/276 (47%)
Query: 238 IKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTIL 297
+K G+ + ++ L ++++ R + L + +S+ I G +Q RE+ + I
Sbjct: 106 LKPGTRVALDMTTL-TIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIE 164
Query: 298 LSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLM 357
L L +PE++ + P+ L GPPGTGKT AR +A+Q +
Sbjct: 165 LPLTNPELFQRVG--------IIPPKGCLLYGPPGTGKTLLARAVASQLDCN------FL 210
Query: 358 YVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI-- 415
V ++ KY GES RL+ ++F+ A + IIF+DE+D+ R SE A R I
Sbjct: 211 KVVSSSIVDKYIGESARLIREMFNYARD-HQPCIIFMDEIDAIGGRRFSEGTSADREIQR 269
Query: 416 -LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI--- 469
L LL Q+DGF+ +V +I ATNR LDPAL+ R D I LP+ + R +I
Sbjct: 270 TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 329
Query: 470 -AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
A KH +G D+R+VC +A
Sbjct: 330 HAGPITKHGEIDYEAIVKLSDG-FNGADLRNVCTEA 364
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 281 (104.0 bits), Expect = 4.6e-23, P = 4.6e-23
Identities = 82/252 (32%), Positives = 128/252 (50%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
+++ I G DQQ +EI++ I L L+ PE+++ + +P+ VL GPPGTGKT
Sbjct: 130 TYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIA--------QPKGVLLYGPPGTGKTL 181
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ KY GE R++ ++F +A E P+ IIF+DE
Sbjct: 182 LARAVAHHTDCR------FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS--IIFMDE 233
Query: 397 VDSFAVAR-DS--EMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS +R DS +R + LL Q+DGFE K + +I ATNR LDPAL+ R
Sbjct: 234 IDSIGSSRIDSAGSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGR 293
Query: 452 FDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSW 508
D I F P E R +I +++ M SG +++ VC +A +
Sbjct: 294 IDRKIEFPPPSVEARADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGM-Y 352
Query: 509 ASKIIRGQITKD 520
A + R +T++
Sbjct: 353 ALRERRVHVTQE 364
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 281 (104.0 bits), Expect = 4.6e-23, P = 4.6e-23
Identities = 85/276 (30%), Positives = 132/276 (47%)
Query: 238 IKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTIL 297
+K G+ + ++ L ++++ R + L + +S+ I G +Q RE+ + I
Sbjct: 92 LKPGTRVALDMTTL-TIMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLSEQIRELREVIE 150
Query: 298 LSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLM 357
L L +PE++ + P+ L GPPGTGKT AR +A+Q +
Sbjct: 151 LPLTNPELFQRVG--------IIPPKGCLLYGPPGTGKTLLARAVASQLDCN------FL 196
Query: 358 YVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI-- 415
V ++ KY GES RL+ ++F+ A + IIF+DE+D+ R SE A R I
Sbjct: 197 KVVSSSIVDKYIGESARLIREMFNYARD-HQPCIIFMDEIDAIGGRRFSEGTSADREIQR 255
Query: 416 -LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI--- 469
L LL Q+DGF+ +V +I ATNR LDPAL+ R D I LP+ + R +I
Sbjct: 256 TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKI 315
Query: 470 -AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
+ KH +G D+R+VC +A
Sbjct: 316 HSGPITKHGDIDYEAIVKLSDG-FNGADLRNVCTEA 350
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 288 (106.4 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 104/346 (30%), Positives = 169/346 (48%)
Query: 184 DSAVAWQLTLKPPEKQNESGGDRAQSGDMNARE---GDLCILIF--RSLITSDKPEIEFI 238
D + Q LKP +++NE +R++ D+ G+L +I +++++ ++
Sbjct: 75 DEFIRNQERLKPQDEKNEE--ERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYV 132
Query: 239 KKGSLTS-EELDALVSVL-QLAGRRIYGL--DE--PQLNTSKSEIS----WENIAGYDQQ 288
S ++L+ SVL + G+ D+ P + K E + + +I G D Q
Sbjct: 133 SILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQ 192
Query: 289 KREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGA 348
+EI++++ L L PE Y+++ G + P+ V+ GPPGTGKT A+ +ANQ A
Sbjct: 193 IQEIKESVELPLTHPEYYEEM--GIK------PPKGVILYGPPGTGKTLLAKAVANQTSA 244
Query: 349 MPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDEVDSFAVAR-DS 406
L V E++ KY G+ +L+ ++F +A E P+ I+F+DE+D+ R DS
Sbjct: 245 -----TFLRVVGSELIQ-KYLGDGPKLVRELFRVAEEHAPS--IVFIDEIDAVGTKRYDS 296
Query: 407 EM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLP 461
E R +L LL Q+DGF+ V VI ATNR + LDPALI R D I F LP
Sbjct: 297 NSGGEREIQRTMLE-LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 355
Query: 462 DHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
D + ++ I + +SG DI+ +C +A
Sbjct: 356 DEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEA 401
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 288 (106.4 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 107/343 (31%), Positives = 167/343 (48%)
Query: 187 VAWQLTLKPPEKQNESGGDRAQSGDMNARE---GDLCILIFRS--LITSDK-PE-----I 235
VA Q LKP E++ E DR++ D+ G+L LI + +++S PE +
Sbjct: 82 VANQERLKPQEEKAEE--DRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGIL 139
Query: 236 EFIKKGSLTSEELDALV--SVLQLAGRRIYGLDEPQLNTSKSEI----SWENIAGYDQQK 289
F+ K L L+ VL + G +D P ++ K E S+ +I G + Q
Sbjct: 140 SFVDKDQL-EPGCSILMHNKVLSVVGILQDEVD-PMVSVMKVEKAPLESYADIGGLEAQI 197
Query: 290 REIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAM 349
+EI++ + L L PE+Y+DI G + P+ V+ G PGTGKT A+ +AN A
Sbjct: 198 QEIKEAVELPLTHPELYEDI--GIK------PPKGVILYGEPGTGKTLLAKAVANSTSA- 248
Query: 350 PWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR---DS 406
L V E++ KY G+ +L+ ++F +A++L + +I+F+DE+D+ R +S
Sbjct: 249 ----TFLRVVGSELIQ-KYLGDGPKLVRELFRVADDL-SPSIVFIDEIDAVGTKRYDANS 302
Query: 407 EMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHE 464
+R + LL Q+DGF+ V VI ATNR + LDPAL+ R D I F LPD +
Sbjct: 303 GGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIK 362
Query: 465 NRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
R+ I + SG DI+ +C +A
Sbjct: 363 TRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEA 405
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 296 (109.3 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 89/232 (38%), Positives = 126/232 (54%)
Query: 253 SVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARG 312
+V+ G I DE + S +E+ +++I G +Q +I++ + L L+ P ++ I G
Sbjct: 180 TVIHCEGEPIKREDEEE---SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAI--G 234
Query: 313 TRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGES 372
+ PR +L GPPGTGKT AR +AN+ GA + L+ P E+ MSK GES
Sbjct: 235 VK------PPRGILLYGPPGTGKTLIARAVANETGAFFF----LINGP-EI-MSKLAGES 282
Query: 373 ERLLGKVFSLANELPNGAIIFLDEVDSFAVARDS-----EMH-EATRRILSVLLRQIDGF 426
E L K F E AIIF+DE+D A+A D + H E RRI+S LL +DG
Sbjct: 283 ESNLRKAFE-ETEKNAPAIIFIDELD--AIASDDCFPSPQTHGEVERRIVSQLLTLMDGL 339
Query: 427 EQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEIAAQYAKH 476
+Q V+V+AATNR +DPAL RFD + G+PD R EI + K+
Sbjct: 340 KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 391
Score = 285 (105.4 bits), Expect = 8.8e-22, P = 8.8e-22
Identities = 80/297 (26%), Positives = 144/297 (48%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++WE+I G + KRE+++ + ++ P+ + KF + VLF GPPG GK
Sbjct: 477 QVTWEDIGGLEDVKRELQELVQYPVEHPDKF--------LKFGMTPSKGVLFYGPPGCGK 528
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IAN+ A + + +++ ++GESE + ++F A + ++F D
Sbjct: 529 TLLAKAIANECQAN------FISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFD 581
Query: 396 EVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
E+DS A AR + + A R+++ +L ++DG K V +I ATNR +DPA++
Sbjct: 582 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 641
Query: 451 RFDSMITFGLPDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERS 507
R D +I LPD ++R I A K SG D+ ++CQ+A +
Sbjct: 642 RLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKL 701
Query: 508 WASKIIRGQITKDGEQACLPPLQEYIES---ATNRRRSLLDAAEQSHQNINNHRTKK 561
+ I +I ++ E+ P E E RR +A + ++++++ +K
Sbjct: 702 AIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 758
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 277 (102.6 bits), Expect = 5.5e-23, Sum P(2) = 5.5e-23
Identities = 82/267 (30%), Positives = 131/267 (49%)
Query: 262 IYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNR 321
I +D+ + +T+K +++ I G +Q R++ + + L + +P +Y + T
Sbjct: 121 ISDIDKSENSTNK--VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKT-------- 170
Query: 322 PRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFS 381
P+ VL GPPGTGKT AR +A+ M + + ++ KY GES R++ ++F+
Sbjct: 171 PKGVLLYGPPGTGKTLLARAMASNINCN------FMRIVVSAIVDKYIGESARIIREMFN 224
Query: 382 LANELPNGAIIFLDEVDSFAVARDSEMHEATRRI---LSVLLRQIDGFEQDKKVVVIAAT 438
A E IIF+DE+D+ R S+ A R I L LL +DGFE+ V +I AT
Sbjct: 225 YAKE-HQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMAT 283
Query: 439 NRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MS 493
NR LDPAL+ R D I LP+ R EI +A +
Sbjct: 284 NRPDVLDPALVRPGRLDRKIEIPLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFN 343
Query: 494 GRDIRDVCQQAERSWASKIIRGQITKD 520
G D+R+VC +A +A + +R + ++
Sbjct: 344 GADLRNVCTEAGM-FAIRAMRDYVIEE 369
Score = 39 (18.8 bits), Expect = 5.5e-23, Sum P(2) = 5.5e-23
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 142 VTIKFQVPPACEIPQLIANLVSHL 165
+T+ ++P CE+ L+ N++S +
Sbjct: 103 LTVMKRLP--CEVDPLVFNMISDI 124
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 277 (102.6 bits), Expect = 5.5e-23, Sum P(2) = 5.5e-23
Identities = 82/267 (30%), Positives = 131/267 (49%)
Query: 262 IYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNR 321
I +D+ + +T+K +++ I G +Q R++ + + L + +P +Y + T
Sbjct: 121 ISDIDKSENSTNK--VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKT-------- 170
Query: 322 PRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFS 381
P+ VL GPPGTGKT AR +A+ M + + ++ KY GES R++ ++F+
Sbjct: 171 PKGVLLYGPPGTGKTLLARAMASNINCN------FMRIVVSAIVDKYIGESARIIREMFN 224
Query: 382 LANELPNGAIIFLDEVDSFAVARDSEMHEATRRI---LSVLLRQIDGFEQDKKVVVIAAT 438
A E IIF+DE+D+ R S+ A R I L LL +DGFE+ V +I AT
Sbjct: 225 YAKE-HQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMAT 283
Query: 439 NRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MS 493
NR LDPAL+ R D I LP+ R EI +A +
Sbjct: 284 NRPDVLDPALVRPGRLDRKIEIPLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFN 343
Query: 494 GRDIRDVCQQAERSWASKIIRGQITKD 520
G D+R+VC +A +A + +R + ++
Sbjct: 344 GADLRNVCTEAGM-FAIRAMRDYVIEE 369
Score = 39 (18.8 bits), Expect = 5.5e-23, Sum P(2) = 5.5e-23
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 142 VTIKFQVPPACEIPQLIANLVSHL 165
+T+ ++P CE+ L+ N++S +
Sbjct: 103 LTVMKRLP--CEVDPLVFNMISDI 124
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 272 (100.8 bits), Expect = 5.6e-23, P = 5.6e-23
Identities = 83/239 (34%), Positives = 113/239 (47%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K + + +I D QK+E+ + + L L E+Y I + PR VL GPPG
Sbjct: 108 KPNVIYADIGSMDIQKQEVWEAMELPLTHFELYKQIG--------IDPPRGVLMYGPPGC 159
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNG-AII 392
GKT A+ +A+ A ++V + KY GE R++ VF L E N AII
Sbjct: 160 GKTMLAKTVAHHMIAA------FIHVVGSEFVHKYLGEGPRIIWDVFHLDKE--NAPAII 211
Query: 393 FLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
F+DE+D+ A R A R RIL LL Q+DGF+Q+ V I ATNRK LDP L+
Sbjct: 212 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNISVKAIMATNRKDTLDPTLL 271
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXX--XXMSGRDIRDVCQQA 504
D I F LPDH R + +K +SG DI +CQ++
Sbjct: 272 RPGHLDHKIEFPLPDHRKRLIFSTITSKMNLSEEVNVEDYVACPDKISGADINSICQES 330
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 287 (106.1 bits), Expect = 6.2e-23, P = 6.2e-23
Identities = 82/237 (34%), Positives = 124/237 (52%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++ +I G D Q +EI++++ L L PE Y+++ G + P+ V+ GPPGTGKT
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEM--GIK------PPKGVILYGPPGTGKTL 234
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNG-AIIFLDE 396
A+ +ANQ A L V E++ KY G+ +L+ ++F +A E +G +I+F+DE
Sbjct: 235 LAKAVANQTSA-----TFLRVVGSELIQ-KYLGDGPKLVRELFRVAEE--HGPSIVFIDE 286
Query: 397 VDSFAVAR-DSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
+D+ R DS E R +L LL Q+DGF+ V VI ATNR + LDPALI
Sbjct: 287 IDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPG 345
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
R D I F LPD + ++ I + +SG DI+ +C +A
Sbjct: 346 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEA 402
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 287 (106.1 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 109/344 (31%), Positives = 168/344 (48%)
Query: 187 VAWQLTLKPPEKQNESGGDRAQSGDMNARE---GDLCILIFRS--LITSDK-PE-----I 235
VA Q LKP E++ E DR++ D+ G+L LI + +++S PE +
Sbjct: 82 VANQERLKPQEEKAEE--DRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGIL 139
Query: 236 EFIKKGSLTSEELDALV--SVLQLAGRRIYGLDEPQLNTSKSEI----SWENIAGYDQQK 289
F+ K L L+ VL + G +D P ++ K E S+ +I G + Q
Sbjct: 140 SFVDKDQL-EPGCSILMHNKVLSVVGILQDEVD-PMVSVMKVEKAPLESYADIGGLEAQI 197
Query: 290 REIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAM 349
+EI++ + L L PE+Y+DI G + P+ V+ G PGTGKT A+ +AN A
Sbjct: 198 QEIKEAVELPLTHPELYEDI--GIK------PPKGVILYGEPGTGKTLLAKAVANSTSA- 248
Query: 350 PWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR-DSEM 408
L V E++ KY G+ +L+ ++F +A++L + +I+F+DE+D+ R D+
Sbjct: 249 ----TFLRVVGSELIQ-KYLGDGPKLVRELFRVADDL-SPSIVFIDEIDAVGTKRYDAHS 302
Query: 409 ---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDH 463
E R +L LL Q+DGF+ V VI ATNR + LDPAL+ R D I F LPD
Sbjct: 303 GGEREIQRTMLE-LLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDI 361
Query: 464 ENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
+ R+ I + SG DI+ +C +A
Sbjct: 362 KTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEA 405
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 286 (105.7 bits), Expect = 8.1e-23, P = 8.1e-23
Identities = 82/237 (34%), Positives = 123/237 (51%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++ +I G D Q +EI++++ L L PE Y+++ G + P+ V+ GPPGTGKT
Sbjct: 181 TYADIGGLDNQIQEIKESVELPLTHPEYYEEM--GIK------PPKGVILYGPPGTGKTL 232
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
A+ +ANQ A L V E++ KY G+ +L+ ++F +A E P+ I+F+DE
Sbjct: 233 LAKAVANQTSA-----TFLRVVGSELIQ-KYLGDGPKLVRELFRVAEEHAPS--IVFIDE 284
Query: 397 VDSFAVAR-DSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
+D+ R DS E R +L LL Q+DGF+ V VI ATNR + LDPALI
Sbjct: 285 IDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPG 343
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
R D I F LPD + ++ I + +SG DI+ +C +A
Sbjct: 344 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEA 400
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 286 (105.7 bits), Expect = 8.2e-23, P = 8.2e-23
Identities = 82/237 (34%), Positives = 123/237 (51%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++ +I G D Q +EI++++ L L PE Y+++ G + P+ V+ GPPGTGKT
Sbjct: 182 TYADIGGLDNQIQEIKESVELPLTHPEYYEEM--GIK------PPKGVILYGPPGTGKTL 233
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
A+ +ANQ A L V E++ KY G+ +L+ ++F +A E P+ I+F+DE
Sbjct: 234 LAKAVANQTSA-----TFLRVVGSELIQ-KYLGDGPKLVRELFRVAEEHAPS--IVFIDE 285
Query: 397 VDSFAVAR-DSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
+D+ R DS E R +L LL Q+DGF+ V VI ATNR + LDPALI
Sbjct: 286 IDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPG 344
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
R D I F LPD + ++ I + +SG DI+ +C +A
Sbjct: 345 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEA 401
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 286 (105.7 bits), Expect = 8.4e-23, P = 8.4e-23
Identities = 82/237 (34%), Positives = 123/237 (51%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++ +I G D Q +EI++++ L L PE Y+++ G + P+ V+ GPPGTGKT
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEM--GIK------PPKGVILYGPPGTGKTL 234
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
A+ +ANQ A L V E++ KY G+ +L+ ++F +A E P+ I+F+DE
Sbjct: 235 LAKAVANQTSA-----TFLRVVGSELIQ-KYLGDGPKLVRELFRVAEEHAPS--IVFIDE 286
Query: 397 VDSFAVAR-DSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
+D+ R DS E R +L LL Q+DGF+ V VI ATNR + LDPALI
Sbjct: 287 IDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPG 345
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
R D I F LPD + ++ I + +SG DI+ +C +A
Sbjct: 346 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEA 402
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 286 (105.7 bits), Expect = 8.4e-23, P = 8.4e-23
Identities = 82/237 (34%), Positives = 123/237 (51%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++ +I G D Q +EI++++ L L PE Y+++ G + P+ V+ GPPGTGKT
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEM--GIK------PPKGVILYGPPGTGKTL 234
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
A+ +ANQ A L V E++ KY G+ +L+ ++F +A E P+ I+F+DE
Sbjct: 235 LAKAVANQTSA-----TFLRVVGSELIQ-KYLGDGPKLVRELFRVAEEHAPS--IVFIDE 286
Query: 397 VDSFAVAR-DSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
+D+ R DS E R +L LL Q+DGF+ V VI ATNR + LDPALI
Sbjct: 287 IDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPG 345
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
R D I F LPD + ++ I + +SG DI+ +C +A
Sbjct: 346 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEA 402
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 286 (105.7 bits), Expect = 8.4e-23, P = 8.4e-23
Identities = 82/237 (34%), Positives = 123/237 (51%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++ +I G D Q +EI++++ L L PE Y+++ G + P+ V+ GPPGTGKT
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEM--GIK------PPKGVILYGPPGTGKTL 234
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
A+ +ANQ A L V E++ KY G+ +L+ ++F +A E P+ I+F+DE
Sbjct: 235 LAKAVANQTSA-----TFLRVVGSELIQ-KYLGDGPKLVRELFRVAEEHAPS--IVFIDE 286
Query: 397 VDSFAVAR-DSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
+D+ R DS E R +L LL Q+DGF+ V VI ATNR + LDPALI
Sbjct: 287 IDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPG 345
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
R D I F LPD + ++ I + +SG DI+ +C +A
Sbjct: 346 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEA 402
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 286 (105.7 bits), Expect = 8.4e-23, P = 8.4e-23
Identities = 82/237 (34%), Positives = 123/237 (51%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++ +I G D Q +EI++++ L L PE Y+++ G + P+ V+ GPPGTGKT
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEM--GIK------PPKGVILYGPPGTGKTL 234
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
A+ +ANQ A L V E++ KY G+ +L+ ++F +A E P+ I+F+DE
Sbjct: 235 LAKAVANQTSA-----TFLRVVGSELIQ-KYLGDGPKLVRELFRVAEEHAPS--IVFIDE 286
Query: 397 VDSFAVAR-DSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
+D+ R DS E R +L LL Q+DGF+ V VI ATNR + LDPALI
Sbjct: 287 IDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPG 345
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
R D I F LPD + ++ I + +SG DI+ +C +A
Sbjct: 346 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEA 402
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 286 (105.7 bits), Expect = 8.4e-23, P = 8.4e-23
Identities = 82/237 (34%), Positives = 123/237 (51%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++ +I G D Q +EI++++ L L PE Y+++ G + P+ V+ GPPGTGKT
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEM--GIK------PPKGVILYGPPGTGKTL 234
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
A+ +ANQ A L V E++ KY G+ +L+ ++F +A E P+ I+F+DE
Sbjct: 235 LAKAVANQTSA-----TFLRVVGSELIQ-KYLGDGPKLVRELFRVAEEHAPS--IVFIDE 286
Query: 397 VDSFAVAR-DSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
+D+ R DS E R +L LL Q+DGF+ V VI ATNR + LDPALI
Sbjct: 287 IDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPG 345
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
R D I F LPD + ++ I + +SG DI+ +C +A
Sbjct: 346 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEA 402
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 286 (105.7 bits), Expect = 8.4e-23, P = 8.4e-23
Identities = 82/237 (34%), Positives = 123/237 (51%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++ +I G D Q +EI++++ L L PE Y+++ G + P+ V+ GPPGTGKT
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEM--GIK------PPKGVILYGPPGTGKTL 234
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
A+ +ANQ A L V E++ KY G+ +L+ ++F +A E P+ I+F+DE
Sbjct: 235 LAKAVANQTSA-----TFLRVVGSELIQ-KYLGDGPKLVRELFRVAEEHAPS--IVFIDE 286
Query: 397 VDSFAVAR-DSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
+D+ R DS E R +L LL Q+DGF+ V VI ATNR + LDPALI
Sbjct: 287 IDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPG 345
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
R D I F LPD + ++ I + +SG DI+ +C +A
Sbjct: 346 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEA 402
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 294 (108.6 bits), Expect = 8.7e-23, P = 8.7e-23
Identities = 78/204 (38%), Positives = 115/204 (56%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+E+ ++++ G +Q +I++ + L L+ P+++ I G + PR +L GPPGTG
Sbjct: 204 NEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAI--GVK------PPRGILLFGPPGTG 255
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +AN+ GA + L+ P +MSK GESE L K F+ E + AI+F+
Sbjct: 256 KTLIARAVANETGAFFF----LINGP--EIMSKMSGESESNLRKAFAEC-EKNSPAILFI 308
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRF 452
DE+D+ A R+ E +RI+S LL +DG + VVVIAATNR +D AL RF
Sbjct: 309 DEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRF 368
Query: 453 DSMITFGLPDHENRQEIAAQYAKH 476
D I G+PD R EI + K+
Sbjct: 369 DREIDIGIPDAVGRLEILRIHTKN 392
Score = 274 (101.5 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 90/320 (28%), Positives = 150/320 (46%)
Query: 218 DLCILIFRSLITSDKPEIEFI--KKGSLTSEELDALVSVLQLAGRRIYGLDEPQ-LNTSK 274
DL L + I + ++E I + ++ +E L++L ++ R G P L +
Sbjct: 415 DLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMENF-RFAMGKSSPSALREAV 473
Query: 275 SEI---SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPP 331
E +W +I G KRE+++ + ++ PE Y KF R VLF GPP
Sbjct: 474 VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKY--------LKFGMQPSRGVLFYGPP 525
Query: 332 GTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAI 391
G GKT A+ IAN+ A + + +++ ++GESE + VF A +
Sbjct: 526 GCGKTLLAKAIANECQAN------FISIKGPELLTMWFGESEANVRDVFDKARAAAP-CV 578
Query: 392 IFLDEVDSFAVARDSEMHEA---TRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL 448
+F DE+DS A AR + +A R+++ +L ++DG K V +I ATNR +DPA+
Sbjct: 579 LFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAV 638
Query: 449 I--SRFDSMITFGLPDHENRQEI-AAQYAKHXXXXXXXXXXXXXXXM--SGRDIRDVCQQ 503
+ R D +I LPD +R +I A K + SG D+ ++CQ+
Sbjct: 639 LRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQR 698
Query: 504 AERSWASKIIRGQITKDGEQ 523
A + + I +I ++ E+
Sbjct: 699 ACKLAIRESIEREIRQEKER 718
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 294 (108.6 bits), Expect = 8.7e-23, P = 8.7e-23
Identities = 78/204 (38%), Positives = 115/204 (56%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+E+ ++++ G +Q +I++ + L L+ P+++ I G + PR +L GPPGTG
Sbjct: 204 NEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAI--GVK------PPRGILLFGPPGTG 255
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +AN+ GA + L+ P +MSK GESE L K F+ E + AI+F+
Sbjct: 256 KTLIARAVANETGAFFF----LINGP--EIMSKMSGESESNLRKAFAEC-EKNSPAILFI 308
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRF 452
DE+D+ A R+ E +RI+S LL +DG + VVVIAATNR +D AL RF
Sbjct: 309 DEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRF 368
Query: 453 DSMITFGLPDHENRQEIAAQYAKH 476
D I G+PD R EI + K+
Sbjct: 369 DREIDIGIPDAVGRLEILRIHTKN 392
Score = 274 (101.5 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 90/320 (28%), Positives = 150/320 (46%)
Query: 218 DLCILIFRSLITSDKPEIEFI--KKGSLTSEELDALVSVLQLAGRRIYGLDEPQ-LNTSK 274
DL L + I + ++E I + ++ +E L++L ++ R G P L +
Sbjct: 415 DLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMENF-RFAMGKSSPSALREAV 473
Query: 275 SEI---SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPP 331
E +W +I G KRE+++ + ++ PE Y KF R VLF GPP
Sbjct: 474 VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKY--------LKFGMQPSRGVLFYGPP 525
Query: 332 GTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAI 391
G GKT A+ IAN+ A + + +++ ++GESE + VF A +
Sbjct: 526 GCGKTLLAKAIANECQAN------FISIKGPELLTMWFGESEANVRDVFDKARAAAP-CV 578
Query: 392 IFLDEVDSFAVARDSEMHEA---TRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL 448
+F DE+DS A AR + +A R+++ +L ++DG K V +I ATNR +DPA+
Sbjct: 579 LFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAV 638
Query: 449 I--SRFDSMITFGLPDHENRQEI-AAQYAKHXXXXXXXXXXXXXXXM--SGRDIRDVCQQ 503
+ R D +I LPD +R +I A K + SG D+ ++CQ+
Sbjct: 639 LRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQR 698
Query: 504 AERSWASKIIRGQITKDGEQ 523
A + + I +I ++ E+
Sbjct: 699 ACKLAIRESIEREIRQEKER 718
>TAIR|locus:2132922 [details] [associations]
symbol:AT4G28000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GO:GO:0017111 IPI:IPI00546324 RefSeq:NP_194529.4
UniGene:At.54531 ProteinModelPortal:F4JKF8 SMR:F4JKF8 PRIDE:F4JKF8
EnsemblPlants:AT4G28000.1 GeneID:828913 KEGG:ath:AT4G28000
OMA:GAVMNEL ArrayExpress:F4JKF8 Uniprot:F4JKF8
Length = 830
Score = 294 (108.6 bits), Expect = 9.2e-23, P = 9.2e-23
Identities = 80/253 (31%), Positives = 133/253 (52%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAVLFEGPPGTGK 335
+++ +I D+ K +++ ++L L+ P+++ +G K P R +L GPPGTGK
Sbjct: 515 VTFADIGSLDETKESLQELVMLPLRRPDLF----KGGLLK-----PCRGILLFGPPGTGK 565
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IAN+AGA + V + + SK++GE E+ + +F+LA ++ + IIF+D
Sbjct: 566 TMMAKAIANEAGAS------FINVSMSTITSKWFGEDEKNVRALFTLAAKV-SPTIIFVD 618
Query: 396 EVDSFAVARDSE-MHEATRRILSVLLRQIDGFEQDK--KVVVIAATNRKQDLDPALISRF 452
EVDS R HEA R+I + + DG + +++V+AATNR DLD A+I RF
Sbjct: 619 EVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMSNAGDRILVLAATNRPFDLDEAIIRRF 678
Query: 453 DSMITFGLPDHENRQEIAAQYA--KHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWAS 510
+ I GLP E+R++I + SG D+++ C A
Sbjct: 679 ERRIMVGLPSVESREKILRTLLSKEKTENLDFQELAQMTDGYSGSDLKNFCTTAAYRPVR 738
Query: 511 KIIRGQITKDGEQ 523
++I+ + KD E+
Sbjct: 739 ELIKQECLKDQER 751
>DICTYBASE|DDB_G0276169 [details] [associations]
symbol:DDB_G0276169 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006626 "protein targeting to mitochondrion" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005741
"mitochondrial outer membrane" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0276169 GO:GO:0005524 GO:GO:0006626
GO:GO:0005741 EMBL:AAFI02000014 GO:GO:0016887 eggNOG:COG0464
RefSeq:XP_001134596.1 ProteinModelPortal:Q1ZXK7
EnsemblProtists:DDB0233374 GeneID:8620390 KEGG:ddi:DDB_G0276169
InParanoid:Q1ZXK7 OMA:WYGETEK Uniprot:Q1ZXK7
Length = 330
Score = 270 (100.1 bits), Expect = 9.2e-23, P = 9.2e-23
Identities = 69/236 (29%), Positives = 120/236 (50%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIAR-GTRCKFESNRPRAVLFEGPPG 332
+ I +E+I G D ++++TI +Q+ + A+ G+ + P+ +L GPPG
Sbjct: 71 RDSIRFEDIGGLDLIIEDLKETIFFPMQAASNLPNKAKNGSFHNDLFSVPKGILLYGPPG 130
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT A+ I+ G + + ++ SK+YGE+E+++ +FS+A +L II
Sbjct: 131 TGKTMLAKAISYHCG------YNFLVIDNSMLDSKWYGETEKMVSAMFSVAKKL-QPTII 183
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGF--EQDKKVVVIAATNRKQDLDPALIS 450
F+DE+DS R+ +E + S+LL+ DGF + KV+V+ ATNR +D A +
Sbjct: 184 FIDEIDSMVSTREDSENETSNSKKSILLQHWDGFFSSGNDKVIVMGATNRPNSIDYAFLR 243
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM--SGRDIRDVCQQA 504
R I LPD + R+ I ++ SG D++++C++A
Sbjct: 244 RLPKRIKVDLPDKDQRKHILQIMLEYHVENDFDYDKIANLTKGYSGSDLKELCKKA 299
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 284 (105.0 bits), Expect = 9.9e-23, P = 9.9e-23
Identities = 92/259 (35%), Positives = 128/259 (49%)
Query: 223 IFRSLITSDKPEIEFIKKGSLTSEELDALVSVLQL-AGRRIYGLDEPQLNTSKSEISWEN 281
+ R L T D+ +++ +L +ALV +L A I L E + K ++++ +
Sbjct: 113 VVRILSTLDREKLKPSSSVALHRHS-NALVDILPPEADSSIAMLGENE----KPDVTYAD 167
Query: 282 IAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARV 341
+ G D QK+EI + + L L ++Y I + PR VL GPPGTGKT +
Sbjct: 168 VGGLDMQKQEIREAVELPLTHFDLYKQIG--------IDPPRGVLLYGPPGTGKTMLVKA 219
Query: 342 IANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFA 401
+AN A + V + KY GE R++ VF +A E + AIIF+DE+D+ A
Sbjct: 220 VANSTTAS------FIRVNGSEFVQKYLGEGPRMVRDVFRMARE-NSPAIIFIDEIDAIA 272
Query: 402 VARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMI 456
R A R RIL LL Q+DGFEQ V VI ATNR LDPAL+ R D I
Sbjct: 273 TKRFDAQTGADREVQRILLELLNQMDGFEQTSNVKVIMATNRADTLDPALLRPGRLDRKI 332
Query: 457 TF-GLPDHENRQEIAAQYA 474
F L D R+ I + A
Sbjct: 333 EFPSLRDRRERRLIFSTIA 351
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 293 (108.2 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 74/203 (36%), Positives = 109/203 (53%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
E+ ++++ G +Q +I + + L L+ P+++ I G + P+ +L GPPG+GK
Sbjct: 203 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSI--GVK------PPKGILLYGPPGSGK 254
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T AR +AN+ GA + +MSK GESE L K F A E +IIF+D
Sbjct: 255 TLIARAVANETGAF------FFCINGPEIMSKLAGESESNLRKAFEEA-EKNAPSIIFID 307
Query: 396 EVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFD 453
E+DS A R+ E RRI+S LL +DG + V+V+ ATNR +DPAL RFD
Sbjct: 308 EIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFD 367
Query: 454 SMITFGLPDHENRQEIAAQYAKH 476
I G+PD R E+ + K+
Sbjct: 368 REIDIGVPDEIGRLEVLRIHTKN 390
Score = 285 (105.4 bits), Expect = 8.8e-22, P = 8.8e-22
Identities = 83/254 (32%), Positives = 128/254 (50%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+SWE+I G + KRE+++T+ ++ PE ++ KF + + VLF GPPG GKT
Sbjct: 477 VSWEDIGGLENVKRELQETVQYPVEHPEKFE--------KFGMSPSKGVLFYGPPGCGKT 528
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ IAN+ A + V +++ ++GESE + ++F A + ++F DE
Sbjct: 529 LLAKAIANECQAN------FISVKGPELLTMWFGESEANVREIFDKARQSAP-CVLFFDE 581
Query: 397 VDSFAVARDSEMHEA---TRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS A R + +A R+L+ LL ++DG K V +I ATNR +D AL+ R
Sbjct: 582 LDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGR 641
Query: 452 FDSMITFGLPDHENRQEI-AAQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERSW 508
D +I LPD ++R I A K SG DI ++CQ+A + +
Sbjct: 642 LDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACK-Y 700
Query: 509 ASKIIRGQITKDGE 522
A IR I KD E
Sbjct: 701 A---IRENIEKDIE 711
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 280 (103.6 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 84/277 (30%), Positives = 134/277 (48%)
Query: 236 EFIKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDT 295
E +K G+ + ++ L ++++ R + L + +++ I G QQ RE+ +
Sbjct: 99 EKLKPGTRVALDVTTL-TIMRYLPREVDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREV 157
Query: 296 ILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVP 355
I L L +P+++ + + P+ L GPPGTGKT AR IA+Q A
Sbjct: 158 IELPLLNPDIF--------LRVGISPPKGCLLYGPPGTGKTLLARAIASQMDAN------ 203
Query: 356 LMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI 415
+ V ++ KY GES RL+ ++F+ A + IIF+DE+D+ R SE A R I
Sbjct: 204 FLKVVSSAIVDKYIGESARLIREMFAYARD-HQPCIIFMDEIDAIGGRRFSEGTSADREI 262
Query: 416 ---LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIA 470
L LL Q+DGF+ +V +I ATNR LDPAL+ R D + LP+ R +I
Sbjct: 263 QRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDIL 322
Query: 471 AQYAK---HXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
+A+ +G D+R++C +A
Sbjct: 323 KIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEA 359
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 278 (102.9 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 85/276 (30%), Positives = 131/276 (47%)
Query: 238 IKKGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTIL 297
+K G+ + ++ L ++++ R + L + +S+ I G +Q RE+ + I
Sbjct: 92 LKPGTRVALDMTTL-TIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIE 150
Query: 298 LSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLM 357
L L +PE++ + P+ L GPPGTGKT AR +A+Q +
Sbjct: 151 LPLTNPELFQRVG--------IIPPKGCLLYGPPGTGKTLLARAVASQLDCN------FL 196
Query: 358 YVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI-- 415
V ++ KY GES RL+ ++F+ A + IIF+DE+D+ R SE A R I
Sbjct: 197 KVVSSSIVDKYIGESARLIREMFNYARD-HQPCIIFMDEIDAIGGRRFSEGTSADREIQR 255
Query: 416 -LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI--- 469
L LL Q+DGF+ +V +I ATNR LDPAL+ R D I LP+ + R +I
Sbjct: 256 TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 315
Query: 470 -AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 504
A KH +G D+ +VC +A
Sbjct: 316 HAGPITKHGEIDYEAIVKLSDG-FNGADLGNVCTEA 350
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 278 (102.9 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 88/254 (34%), Positives = 125/254 (49%)
Query: 223 IFRSLITSDKPEIEFIKKGSLTS--EELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWE 280
+ R L T D+ E +K + + +ALV +L + P + ++S+
Sbjct: 81 VVRILSTLDR---ELLKPSASVALQRHSNALVDILPPEADSSISMLRPD---ERPDVSYA 134
Query: 281 NIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCAR 340
++ G D QK+E+ + + L L ++Y I + PR VL GPPGTGKT +
Sbjct: 135 DVGGLDVQKQEVREAVELPLTQGDLYRQIG--------IDPPRGVLLYGPPGTGKTMLVK 186
Query: 341 VIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNG-AIIFLDEVDS 399
+AN A + V E V KY GE R++ VF +A E N AIIF+DE+D+
Sbjct: 187 AVANSTAANF-----IRVVGSEFVQ-KYLGEGPRMVRDVFRMARE--NAPAIIFIDEIDA 238
Query: 400 FAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDS 454
A R A R RIL LL Q+DGF+Q V VI ATNR LDPAL+ R D
Sbjct: 239 IATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDR 298
Query: 455 MITFGLPDHENRQE 468
I F P + +R++
Sbjct: 299 KIEF--PSYRDRRQ 310
>WB|WBGene00010557 [details] [associations]
symbol:mspn-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0040007 GO:GO:0002119
GO:GO:0005741 GO:GO:0010171 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000225141 GeneTree:ENSGT00550000074823 EMBL:Z69664
PIR:T23311 RefSeq:NP_501860.1 RefSeq:NP_501861.1 UniGene:Cel.22858
ProteinModelPortal:P54815 SMR:P54815 IntAct:P54815
MINT:MINT-1100399 STRING:P54815 PaxDb:P54815 PRIDE:P54815
EnsemblMetazoa:K04D7.2a.1 EnsemblMetazoa:K04D7.2a.2 GeneID:177896
KEGG:cel:CELE_K04D7.2 UCSC:K04D7.2a CTD:177896 WormBase:K04D7.2a
WormBase:K04D7.2b InParanoid:P54815 OMA:GDQIIVM NextBio:898840
Uniprot:P54815
Length = 342
Score = 268 (99.4 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 78/268 (29%), Positives = 131/268 (48%)
Query: 279 WENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSC 338
W+ I G ++ E++D I+L L+ G+ + PR +L GPPG GKT
Sbjct: 82 WDEIGGCEELVAELKDRIILPLRFAS-----QSGSHLL---SPPRGILLYGPPGCGKTLL 133
Query: 339 ARVIANQAGAMPWQGVPLMYVPLEV--VMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ +A AG ++ L+V + K+YGES++L VFS+A + IIF+DE
Sbjct: 134 AKAVARAAGCR--------FINLQVSNLTDKWYGESQKLAAAVFSVAQKF-QPTIIFIDE 184
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFEQD-KKVVVIAATNRKQDLDPALISRFDSM 455
+DSF R S HE+T + + + DGF +++V+ ATNR +D+D A++ R +
Sbjct: 185 IDSFLRDRQSHDHESTAMMKAQFMTLWDGFSSSGDQIIVMGATNRPRDVDAAILRRMTAR 244
Query: 456 ITFGLPDHENRQEIA---AQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKI 512
+P+ + R +I + K +SG D+++VC+ A + A
Sbjct: 245 FQVPVPNAKQRSQILNVILRNEKINNTVNLGEIAQAAEGLSGSDLKEVCRLALLARA--- 301
Query: 513 IRGQITKDGEQACLPPLQEY-IESATNR 539
+ + G L PL++ ESA ++
Sbjct: 302 -KATVASGGSVNQLLPLEQSDFESAVHK 328
>TAIR|locus:2126783 [details] [associations]
symbol:AT4G24860 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GO:GO:0017111 IPI:IPI00528866 RefSeq:NP_194217.2
UniGene:At.32315 ProteinModelPortal:F4JRR2 SMR:F4JRR2 PRIDE:F4JRR2
EnsemblPlants:AT4G24860.1 GeneID:828589 KEGG:ath:AT4G24860
OMA:ITRIQRK ArrayExpress:F4JRR2 Uniprot:F4JRR2
Length = 1122
Score = 294 (108.6 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 82/266 (30%), Positives = 141/266 (53%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAVLFEGPP 331
S ++++++I ++ K +++ ++L LQ PE++ CK E +P + +L GPP
Sbjct: 813 SDIDVTFDDIGALEKVKDILKELVMLPLQRPELF--------CKGELTKPCKGILLFGPP 864
Query: 332 GTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAI 391
GTGKT A+ +A +A A + + + + SK++GE E+ + VFSLA+++ + ++
Sbjct: 865 GTGKTMLAKAVAKEADAN------FINISMSSITSKWFGEGEKYVKAVFSLASKM-SPSV 917
Query: 392 IFLDEVDSFAVARDSEM-HEATRRILSVLLRQIDGF--EQDKKVVVIAATNRKQDLDPAL 448
IF+DEVDS R+ HEA+R+I + + DG ++ ++V+V+AATNR DLD A+
Sbjct: 918 IFVDEVDSMLGRREHPREHEASRKIKNEFMMHWDGLTTQERERVLVLAATNRPFDLDEAV 977
Query: 449 ISRFDSMITFGLPDHENRQEIAAQY-AKHXXX--XXXXXXXXXXXXMSGRDIRDVCQQAE 505
I R + GLPD NR I AK SG D++++C A
Sbjct: 978 IRRLPRRLMVGLPDTSNRAFILKVILAKEDLSPDLDIGEIASMTNGYSGSDLKNLCVTAA 1037
Query: 506 RSWASKII-RGQITKDGE--QACLPP 528
+I+ + + +D Q +PP
Sbjct: 1038 HRPIKEILEKEKRERDAALAQGKVPP 1063
>FB|FBgn0040208 [details] [associations]
symbol:Kat60 "Katanin 60" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;IDA;IMP;NAS]
[GO:0007017 "microtubule-based process" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008568 "microtubule-severing ATPase activity"
evidence=IDA;IMP] [GO:0005813 "centrosome" evidence=IDA]
[GO:0070462 "plus-end specific microtubule depolymerization"
evidence=IMP] [GO:0000091 "mitotic anaphase A" evidence=IMP]
[GO:0005694 "chromosome" evidence=IDA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IMP] [GO:0022416 "chaeta
development" evidence=IGI] [GO:0035220 "wing disc development"
evidence=IGI] [GO:0031122 "cytoplasmic microtubule organization"
evidence=IMP] [GO:0007019 "microtubule depolymerization"
evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA] [GO:0030336
"negative regulation of cell migration" evidence=IMP] [GO:0031252
"cell leading edge" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005938 GO:GO:0005813
GO:GO:0005694 GO:GO:0031252 GO:GO:0030336 GO:GO:0022416
GO:GO:0035220 GO:GO:0000070 HSSP:Q01853 eggNOG:COG0464
GO:GO:0008017 GO:GO:0008568 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0031122 GO:GO:0000091 GO:GO:0070462
GO:GO:0008352 EMBL:AY071142 ProteinModelPortal:Q8SZ40 SMR:Q8SZ40
STRING:Q8SZ40 PaxDb:Q8SZ40 PRIDE:Q8SZ40 FlyBase:FBgn0040208
InParanoid:Q8SZ40 OrthoDB:EOG4573NX ChiTaRS:katanin-60
ArrayExpress:Q8SZ40 Bgee:Q8SZ40 Uniprot:Q8SZ40
Length = 572
Score = 288 (106.4 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 85/249 (34%), Positives = 122/249 (48%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAVLFEGPPGTG 334
++ W +IA KR +E+ ++L + P+ + +G R RP + VL GPPGTG
Sbjct: 289 KVRWSDIADLHDAKRLLEEAVVLPMLMPDYF----KGIR------RPWKGVLMVGPPGTG 338
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT A+ +A + G V + SKY GESE+++ +F +A I F+
Sbjct: 339 KTMLAKAVATECGTT------FFNVSSATLTSKYRGESEKMVRLLFEMARFYAPSTI-FI 391
Query: 395 DEVDSFAVARDSEM-HEATRRILSVLLRQIDGF----EQDKKVVVIAATNRKQDLDPALI 449
DE+DS R SE HEA+RR+ S LL Q+DG EQ K V+V+AATN D+D AL
Sbjct: 392 DEIDSLCSRRGSESEHEASRRVKSELLVQMDGVGGGEEQAKVVMVLAATNFPWDIDEALR 451
Query: 450 SRFDSMITFGLPDHENRQ---EIAAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAER 506
R + I LP E R+ +I + K SG DI +VC++A
Sbjct: 452 RRLEKRIYIPLPSDEGREALLKINLREVKVDDSVDLTYVANELKGYSGADITNVCREASM 511
Query: 507 SWASKIIRG 515
+ I G
Sbjct: 512 MSMRRKIAG 520
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 291 (107.5 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 77/203 (37%), Positives = 111/203 (54%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
E+ +++I G +Q +I + + L L+ P+++ +I G + P+ +L GPPG GK
Sbjct: 198 EVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNI--GVK------PPKGILLYGPPGCGK 249
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T AR +AN+ GA + L+ P +MSK GESE L K F A E +IIF+D
Sbjct: 250 TMIARAVANETGAFFF----LINGP--EIMSKLAGESESNLRKAFEEA-EKNAPSIIFID 302
Query: 396 EVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFD 453
E+DS A R+ E RRI+S LL +DG + V+V+ ATNR +DPAL RFD
Sbjct: 303 EIDSIAPKREKTQGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFD 362
Query: 454 SMITFGLPDHENRQEIAAQYAKH 476
I +PD R EI + K+
Sbjct: 363 REIDITIPDATGRLEIMRIHTKN 385
Score = 272 (100.8 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 93/319 (29%), Positives = 152/319 (47%)
Query: 218 DLCILIFRSLITS--DKPEIEFIKKGSLTSEELDALVSVLQLAGRRIYGLDEPQ-LNTSK 274
DL L S + +K ++ ++ ++++E L+++ SV Q R L P L +
Sbjct: 408 DLAALCTESALQCIREKMDVIDLEDETISAEILESM-SVTQDHFRTALTLSNPSALRETV 466
Query: 275 SEI---SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPP 331
E+ +WE+I G + KRE+ +T+ ++ PE + KF + VLF GPP
Sbjct: 467 VEVPTTTWEDIGGLEGVKRELRETVQYPVEHPEKFR--------KFGMQPSKGVLFYGPP 518
Query: 332 GTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAI 391
G GKT A+ IAN+ A + + +++ ++GESE + ++F A + +
Sbjct: 519 GCGKTLLAKAIANECQAN------FISIKGPELLTMWFGESEANVRELFDKARQAAP-CV 571
Query: 392 IFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL 448
+F DE+DS A +R S +A R+++ +L ++DG K V +I ATNR +DPA+
Sbjct: 572 LFFDELDSIARSRGSSQGDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAI 631
Query: 449 I--SRFDSMITFGLPDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQ 503
+ R D +I LPD +R I A K SG D+ ++CQ+
Sbjct: 632 LRPGRLDQLIYIPLPDLPSRVAILKACLNKSPVAKDVDLEFLGQKTQGFSGADLTEICQR 691
Query: 504 AERSWASKIIRGQITKDGE 522
A IR I KD E
Sbjct: 692 A----CKLAIRESIEKDIE 706
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 290 (107.1 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 85/281 (30%), Positives = 147/281 (52%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++++ I G + Q +EI + I L L+ PE++ + + PR VL GPPGTGK
Sbjct: 343 KVTYDMIGGLNSQLKEIREIIELPLKQPELFKS--------YGISPPRGVLLYGPPGTGK 394
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T AR +AN+ GA V ++ P E++ SK+YGE+E L ++F+ A L + +IIF+D
Sbjct: 395 TMIARAVANEVGAY----VSVINGP-EII-SKFYGETEARLRQIFAEAT-LRHPSIIFID 447
Query: 396 EVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALI--S 450
E+D+ R+ +E +R+++ LL +DG + +V+V+ ATNR LD AL
Sbjct: 448 ELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPG 507
Query: 451 RFDSMITFGLPDHENRQEIAAQYAK---HXXXXXXXXXXXXXXX-MSGRDIRDVCQQAER 506
RFD I G+P+ ++R +I + + H G D++ +C +A
Sbjct: 508 RFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGL 567
Query: 507 SWASKIIRGQIT-KDGEQACLPP--LQEYIESATNRRRSLL 544
+++R Q D + A L L+++++ + R S +
Sbjct: 568 YALRRVLRKQPNLPDSKVAGLVKITLKDFLQGMNDIRPSAM 608
Score = 230 (86.0 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 59/175 (33%), Positives = 95/175 (54%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+SW +I G + K +++ + L+ PE + + G + P+ VL GPPG KT
Sbjct: 618 VSWSDIGGLENIKLKLKQAVEWPLKHPESFTQM--GIQ------PPKGVLLYGPPGCSKT 669
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ +AN++G + + + +M+KY GESER + ++F A + +IIF DE
Sbjct: 670 MIAKALANESG------LNFLAIKGPELMNKYVGESERAVREIFRKARAVAP-SIIFFDE 722
Query: 397 VDSFAVARDSEMH--EATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
+D+ AV R S R+L+ LL ++DG EQ K V ++AATNR +D L+
Sbjct: 723 LDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKELL 777
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 290 (107.1 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 73/203 (35%), Positives = 109/203 (53%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
++ ++++ G +Q +I + + L L+ P+++ I G + P+ +L GPPG+GK
Sbjct: 203 DVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSI--GVK------PPKGILLYGPPGSGK 254
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T AR +AN+ GA + +MSK GESE L K F A E +IIF+D
Sbjct: 255 TLIARAVANETGAF------FFCINGPEIMSKLAGESESNLRKAFEEA-EKNAPSIIFID 307
Query: 396 EVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFD 453
E+DS A R+ E RRI+S LL +DG + V+V+ ATNR +DPAL RFD
Sbjct: 308 EIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFD 367
Query: 454 SMITFGLPDHENRQEIAAQYAKH 476
I G+PD R E+ + K+
Sbjct: 368 REIDIGVPDEIGRLEVLRIHTKN 390
Score = 277 (102.6 bits), Expect = 6.8e-21, P = 6.8e-21
Identities = 81/256 (31%), Positives = 128/256 (50%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+SW +I G + KRE+++T+ ++ PE ++ KF + + VLF GPPG GKT
Sbjct: 477 VSWNDIGGLENVKRELQETVQYPVEHPEKFE--------KFGMSPSKGVLFYGPPGCGKT 528
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ IAN+ A + V +++ ++GESE + ++F A + ++F DE
Sbjct: 529 LLAKAIANECQAN------FISVKGPELLTMWFGESEANVREIFDKARQSAP-CVLFFDE 581
Query: 397 VDSFAVARDS----EMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
+DS A R + A R+L+ LL ++DG K V +I ATNR +D AL+
Sbjct: 582 LDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPG 641
Query: 451 RFDSMITFGLPDHENRQEI---AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERS 507
R D +I LPD ++R I A + + SG DI ++CQ+A +
Sbjct: 642 RLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACK- 700
Query: 508 WASKIIRGQITKDGEQ 523
+A IR I KD E+
Sbjct: 701 YA---IRENIEKDIEK 713
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 290 (107.1 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 79/206 (38%), Positives = 114/206 (55%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S ++I ++++ G +Q +I++ + L L+ P+++ I G + PR +L GPPG
Sbjct: 203 SMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAI--GIK------PPRGILLFGPPG 254
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ G+ + L+ P VMSK GESE L K F E AI+
Sbjct: 255 TGKTLIARAVANETGSFFF----LINGP--EVMSKMSGESESNLRKAFEEC-EKNQPAIL 307
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--IS 450
F+DE+D+ A R+ E RRI+S LL +DG + +VVIAATNR +D AL
Sbjct: 308 FIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFG 367
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKH 476
RFD I G+PD R EI + K+
Sbjct: 368 RFDREIDIGIPDAVGRLEILRIHTKN 393
Score = 262 (97.3 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 83/287 (28%), Positives = 135/287 (47%)
Query: 231 DKPEIEFIKKGSLTSEELDALVSVLQLAGRRIYGLDEPQ-LNTSKSEI---SWENIAGYD 286
+K E+ ++ + +E L++L ++ R G P L + E +W +I G
Sbjct: 431 EKMELIDLEDDQIDAEVLNSLAVTMENF-RFAQGKSSPSALREAVVETPNTTWSDIGGLQ 489
Query: 287 QQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQA 346
KRE+++ + ++ PE Y KF R VLF GPPG GKT A+ IAN+
Sbjct: 490 NVKRELQELVQYPVEHPEKY--------LKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 541
Query: 347 GAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDS 406
A + + +++ ++GESE + VF A ++F DE+DS A AR
Sbjct: 542 QAN------FISIKGPELLTMWFGESEANVRDVFDKARAAAP-CVLFFDELDSIAKARGG 594
Query: 407 ----EMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGL 460
+ A+ R+++ +L ++DG K V +I ATNR +DPA++ R D +I L
Sbjct: 595 GAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL 654
Query: 461 PDHENRQEIA-AQYAKHXXXXXXXXXXXXXXXM--SGRDIRDVCQQA 504
PD +R +I A K + SG D+ ++CQ+A
Sbjct: 655 PDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRA 701
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 290 (107.1 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 79/206 (38%), Positives = 114/206 (55%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S ++I ++++ G +Q +I++ + L L+ P+++ I G + PR +L GPPG
Sbjct: 203 SMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAI--GIK------PPRGILLFGPPG 254
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ G+ + L+ P VMSK GESE L K F E AI+
Sbjct: 255 TGKTLIARAVANETGSFFF----LINGP--EVMSKMSGESESNLRKAFEEC-EKNQPAIL 307
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--IS 450
F+DE+D+ A R+ E RRI+S LL +DG + +VVIAATNR +D AL
Sbjct: 308 FIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFG 367
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKH 476
RFD I G+PD R EI + K+
Sbjct: 368 RFDREIDIGIPDAVGRLEILRIHTKN 393
Score = 262 (97.3 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 83/287 (28%), Positives = 135/287 (47%)
Query: 231 DKPEIEFIKKGSLTSEELDALVSVLQLAGRRIYGLDEPQ-LNTSKSEI---SWENIAGYD 286
+K E+ ++ + +E L++L ++ R G P L + E +W +I G
Sbjct: 431 EKMELIDLEDDQIDAEVLNSLAVTMENF-RFAQGKSSPSALREAVVETPNTTWSDIGGLQ 489
Query: 287 QQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQA 346
KRE+++ + ++ PE Y KF R VLF GPPG GKT A+ IAN+
Sbjct: 490 NVKRELQELVQYPVEHPEKY--------LKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 541
Query: 347 GAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDS 406
A + + +++ ++GESE + VF A ++F DE+DS A AR
Sbjct: 542 QAN------FISIKGPELLTMWFGESEANVRDVFDKARAAAP-CVLFFDELDSIAKARGG 594
Query: 407 ----EMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGL 460
+ A+ R+++ +L ++DG K V +I ATNR +DPA++ R D +I L
Sbjct: 595 GAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL 654
Query: 461 PDHENRQEIA-AQYAKHXXXXXXXXXXXXXXXM--SGRDIRDVCQQA 504
PD +R +I A K + SG D+ ++CQ+A
Sbjct: 655 PDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRA 701
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 279 (103.3 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 86/264 (32%), Positives = 134/264 (50%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++E + G D+Q +EI++ I L ++ PE++D A G +P+ VL GPPGTGKT
Sbjct: 146 TYEMVGGLDKQIKEIKEVIELPVKHPELFD--ALGIA------QPKGVLLYGPPGTGKTL 197
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ K+ GE R++ ++F +A E P+ IIF+DE
Sbjct: 198 LARAVAHHTECT------FIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS--IIFMDE 249
Query: 397 VDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS +R S +R + LL Q+DGFE K + VI ATNR LDPAL+ R
Sbjct: 250 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGR 309
Query: 452 FDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSW 508
D I F P+ E R +I +++ M SG +++ VC +A +
Sbjct: 310 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM-Y 368
Query: 509 ASKIIRGQITK-DGEQACLPPLQE 531
A + R +T+ D E A +Q+
Sbjct: 369 ALRERRVHVTQEDFEMAVAKVMQK 392
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 282 (104.3 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 88/256 (34%), Positives = 134/256 (52%)
Query: 262 IYGLDEPQLNTSKSEI----SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKF 317
I G +P +N K E S+ +I G + Q +E+++ I L L PE+Y++I G +
Sbjct: 162 IDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEI--GIK--- 216
Query: 318 ESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLG 377
P+ V+ G PGTGKT A+ +ANQ A L V E++ KY G+ +L+
Sbjct: 217 ---PPKGVILYGEPGTGKTLLAKAVANQTSA-----TFLRVVGSELIQ-KYLGDGPKLVR 267
Query: 378 KVFSLANELPNGAIIFLDEVDSFAVAR-DSEM---HEATRRILSVLLRQIDGFEQDKKVV 433
++F +A+E +I+F+DE+D+ R DS+ E R +L LL Q+DGF+ V
Sbjct: 268 ELFRVADECAP-SIVFIDEIDAVGTKRYDSQSGGEREIQRTMLE-LLNQLDGFDARTDVK 325
Query: 434 VIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQY-AKHXXXXXXXXXXXXXX 490
VI ATNR + LDPALI R D I F LPD + +++I + AK
Sbjct: 326 VIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMS 385
Query: 491 X--MSGRDIRDVCQQA 504
+SG DI+ +C ++
Sbjct: 386 KDDLSGADIKAICTES 401
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 266 (98.7 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 86/277 (31%), Positives = 134/277 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L PE + ++ E P+ VL GPPGT
Sbjct: 32 KPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLG------IEP--PKGVLLFGPPGT 83
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A +IF
Sbjct: 84 GKTLCARAVANRTDACF-----IRVIGSELVQ-KYVGEGARMVRELFEMART-KKACLIF 136
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 137 FDEIDAIGGARFDDGAGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 195
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F LPD E R I +A+ +G +IR VC +A
Sbjct: 196 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 255
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 256 GM-FAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 291
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 285 (105.4 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 80/297 (26%), Positives = 144/297 (48%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++WE+I G + KRE+++ + ++ P+ + KF + VLF GPPG GK
Sbjct: 205 QVTWEDIGGLEDVKRELQELVQYPVEHPDKF--------LKFGMTPSKGVLFYGPPGCGK 256
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IAN+ A + + +++ ++GESE + ++F A + ++F D
Sbjct: 257 TLLAKAIANECQAN------FISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFD 309
Query: 396 EVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
E+DS A AR + + A R+++ +L ++DG K V +I ATNR +DPA++
Sbjct: 310 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 369
Query: 451 RFDSMITFGLPDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERS 507
R D +I LPD ++R I A K SG D+ ++CQ+A +
Sbjct: 370 RLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKL 429
Query: 508 WASKIIRGQITKDGEQACLPPLQEYIES---ATNRRRSLLDAAEQSHQNINNHRTKK 561
+ I +I ++ E+ P E E RR +A + ++++++ +K
Sbjct: 430 AIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 486
Score = 211 (79.3 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 52/115 (45%), Positives = 67/115 (58%)
Query: 364 VMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQI 423
+MSK GESE L K F A E AIIF+DE+D+ A R+ E RRI+S LL +
Sbjct: 6 IMSKLAGESESNLRKAFEEA-EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 64
Query: 424 DGFEQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEIAAQYAKH 476
DG +Q V+V+AATNR +DPAL RFD + G+PD R EI + K+
Sbjct: 65 DGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 119
>UNIPROTKB|Q7QBW0 [details] [associations]
symbol:spas "Spastin" species:7165 "Anopheles gambiae"
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0051013
"microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005815 Pfam:PF04212
eggNOG:COG0464 GO:GO:0008017 HSSP:O75351 GO:GO:0008568
GO:GO:0051013 GO:GO:0005874 SMART:SM00745 EMBL:AAAB01008859
RefSeq:XP_312634.5 GeneID:1273633 KEGG:aga:AgaP_AGAP002334
VectorBase:AGAP002334 CTD:1273633 KO:K13254 OrthoDB:EOG44XGXW
PhylomeDB:Q7QBW0 HAMAP:MF_03021 Uniprot:Q7QBW0
Length = 827
Score = 289 (106.8 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 69/196 (35%), Positives = 108/196 (55%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+++ W++IAG + K+ +++ ++L PE++ G R + +L GPPG G
Sbjct: 547 AKVQWQDIAGQEVAKQALQEMVILPSVRPELFT----GLRTP-----AKGLLLFGPPGNG 597
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +A + A + + SKY G+ E+L+ +F++A EL +IIF+
Sbjct: 598 KTLLARAVATECSAT------FFSISAATLTSKYVGDGEKLVRALFAVAREL-QPSIIFI 650
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALISR 451
DEVDS R S HEATRR+ + L Q DG + ++VV+AATNR Q+LD A + R
Sbjct: 651 DEVDSVLSERSSNEHEATRRLKTEFLVQFDGLPANSEADRIVVMAATNRPQELDEAALRR 710
Query: 452 FDSMITFGLPDHENRQ 467
F + LPD + R+
Sbjct: 711 FPKRVYVTLPDRDTRE 726
>TAIR|locus:2024522 [details] [associations]
symbol:DAA1 "DUO1-activated ATPase 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0048235 "pollen sperm cell differentiation"
evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:CP002684 GO:GO:0005524 GO:GO:0017111 GO:GO:0048235
IPI:IPI00517535 RefSeq:NP_849842.1 UniGene:At.16450
ProteinModelPortal:F4I5A3 SMR:F4I5A3 PRIDE:F4I5A3
EnsemblPlants:AT1G64110.2 GeneID:842716 KEGG:ath:AT1G64110
OMA:KANPIVL Uniprot:F4I5A3
Length = 829
Score = 289 (106.8 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 81/254 (31%), Positives = 136/254 (53%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAVLFEGPPGTGK 335
+++++I D+ K +++ ++L L+ P+++ G K P R +L GPPGTGK
Sbjct: 518 VTFKDIGALDEIKESLQELVMLPLRRPDLFT----GGLLK-----PCRGILLFGPPGTGK 568
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IA +AGA + V + + SK++GE E+ + +F+LA+++ + IIF+D
Sbjct: 569 TMLAKAIAKEAGAS------FINVSMSTITSKWFGEDEKNVRALFTLASKV-SPTIIFVD 621
Query: 396 EVDSFAVARDSE-MHEATRRILSVLLRQIDGF--EQDKKVVVIAATNRKQDLDPALISRF 452
EVDS R HEA R+I + + DG + ++++V+AATNR DLD A+I RF
Sbjct: 622 EVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIRRF 681
Query: 453 DSMITFGLPDHENRQEIAAQY-AKHXXXXXXXXXXXXXXX--MSGRDIRDVCQQAERSWA 509
+ I GLP ENR++I AK +G D++++C A
Sbjct: 682 ERRIMVGLPAVENREKILRTLLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTAAYRPV 741
Query: 510 SKIIRGQITKDGEQ 523
++I+ + KD E+
Sbjct: 742 RELIQQERIKDTEK 755
>TAIR|locus:4010714050 [details] [associations]
symbol:AT5G52882 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0017111 IPI:IPI00785844 RefSeq:NP_001078747.1
UniGene:At.23894 ProteinModelPortal:F4KHN5 SMR:F4KHN5 PRIDE:F4KHN5
EnsemblPlants:AT5G52882.1 GeneID:5008305 KEGG:ath:AT5G52882
OMA:LESERFY Uniprot:F4KHN5
Length = 829
Score = 289 (106.8 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 80/253 (31%), Positives = 135/253 (53%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAVLFEGPPGTGK 335
+++ +I D+ K +++ ++L L+ P+++ +G K P R +L GPPGTGK
Sbjct: 514 VTFADIGSLDETKDSLQELVMLPLRRPDLF----QGGLLK-----PCRGILLFGPPGTGK 564
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IAN+AGA + V + + SK++GE E+ + +F+LA ++ + IIF+D
Sbjct: 565 TMLAKAIANEAGAS------FINVSMSTITSKWFGEDEKNVRALFTLAAKV-SPTIIFVD 617
Query: 396 EVDSFAVARDSE-MHEATRRILSVLLRQIDGF--EQDKKVVVIAATNRKQDLDPALISRF 452
EVDS R HEA R+I + + DG + ++++V+AATNR DLD A+I RF
Sbjct: 618 EVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMTKPGERILVLAATNRPFDLDEAIIRRF 677
Query: 453 DSMITFGLPDHENRQEIAAQYA--KHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWAS 510
+ I GLP E+R++I + SG D++++C A
Sbjct: 678 ERRIMVGLPSIESREKILRTLLSKEKTENLDFHELGQITEGYSGSDLKNLCITAAYRPVR 737
Query: 511 KIIRGQITKDGEQ 523
++I+ + KD E+
Sbjct: 738 ELIQQERLKDQER 750
>UNIPROTKB|O61577 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:7668 "Strongylocentrotus purpuratus" [GO:0000922 "spindle
pole" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005819 "spindle" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AF052191 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0005815 eggNOG:COG0464 GO:GO:0008568
GO:GO:0000922 GO:GO:0005874 KO:K07767 HAMAP:MF_03023 CTD:11104
RefSeq:NP_999733.1 UniGene:Spu.26881 ProteinModelPortal:O61577
STRING:O61577 GeneID:373368 KEGG:spu:373368 InParanoid:O61577
Uniprot:O61577
Length = 516
Score = 284 (105.0 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 84/251 (33%), Positives = 123/251 (49%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAVLFEGPPGTGK 335
+ W +IAG + KR +E+ ++L L P+ + +G R RP + VL GPPGTGK
Sbjct: 231 VHWADIAGLTEAKRLLEEAVVLPLWMPDYF----KGIR------RPWKGVLMVGPPGTGK 280
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ +A + G V + SKY+GESE+L+ +F +A I F+D
Sbjct: 281 TMLAKAVATECGTT------FFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTI-FID 333
Query: 396 EVDSFAVARDS-EMHEATRRILSVLLRQIDGF-------EQDKKVVVIAATNRKQDLDPA 447
E+DS R + HEA+RR+ S LL Q+DG E K V+V+AATN D+D A
Sbjct: 334 EIDSICSKRGTGSEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEA 393
Query: 448 LISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
L R + I LP+ + R+++ K M SG DI +VC+ A
Sbjct: 394 LRRRLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDA 453
Query: 505 ERSWASKIIRG 515
+ I+G
Sbjct: 454 SMMAMRRRIQG 464
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 280 (103.6 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 79/203 (38%), Positives = 107/203 (52%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G D QK+EI + + L L ++Y+ I + PR VL GPPGT
Sbjct: 166 KPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIG--------IDPPRGVLLYGPPGT 217
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNG-AII 392
GKT + +AN A + V + KY GE R++ VF LA E N +II
Sbjct: 218 GKTMLVKAVANSTKAA------FIRVNGSEFVHKYLGEGPRMVRDVFRLARE--NAPSII 269
Query: 393 FLDEVDSFAVAR-DSEM--HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
F+DEVDS A R D++ +RIL LL Q+DGF+Q V VI ATNR LDPAL+
Sbjct: 270 FIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALL 329
Query: 450 --SRFDSMITF-GLPDHENRQEI 469
R D I F L D R+ I
Sbjct: 330 RPGRLDRKIEFPSLRDRRERRLI 352
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 268 (99.4 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 85/264 (32%), Positives = 133/264 (50%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++E I G D+Q +EI++ I L ++ PE+++ A G +P+ VL GPPGTGKT
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFE--ALGIA------QPKGVLLYGPPGTGKTL 198
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ K+ GE R++ ++F +A E P+ IIF+DE
Sbjct: 199 LARAVAHHTDCT------FIRVSGSELVQKFIGEGARMVRELFVMAREHAPS--IIFMDE 250
Query: 397 VDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS +R S +R + LL Q+DGFE K + VI ATNR LD AL+ R
Sbjct: 251 IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGR 310
Query: 452 FDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSW 508
D I F P+ E R +I +++ M SG +++ VC +A +
Sbjct: 311 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM-Y 369
Query: 509 ASKIIRGQITK-DGEQACLPPLQE 531
A + R +T+ D E A +Q+
Sbjct: 370 ALRERRVHVTQEDFEMAVAKVMQK 393
Score = 48 (22.0 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 167 LKVEEHGGGSDMGLRAWDSAVAWQLTLKPPEKQNESGGDRAQSGDMNAR 215
+ +E+ GGS GLR + + +L L EK +AQ ++NA+
Sbjct: 9 MDIEDSKGGS--GLRQYYLSKIEELQLTVNEKSQNLRRLQAQRNELNAK 55
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 275 (101.9 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 79/235 (33%), Positives = 120/235 (51%)
Query: 240 KGSLTSEELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLS 299
+G S ++ L +++++ R + L +IS+ + G ++Q RE+ + I L
Sbjct: 93 QGVRVSLDMTTL-TIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELP 151
Query: 300 LQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYV 359
L++PE++ + G + P+ VL GPPGTGKT AR +A G V + V
Sbjct: 152 LKNPELF--LRVGIK------PPKGVLLYGPPGTGKTLLARAVAASLG------VNFLKV 197
Query: 360 PLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRI---L 416
++ KY GES R++ ++F A E +IF+DE+D+ R SE A R I L
Sbjct: 198 VSSAIVDKYIGESARIIREMFGYAKE-HEPCVIFMDEIDAIGGRRFSEGTSADREIQRTL 256
Query: 417 SVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 469
LL Q+DGF+ + +I ATNR LDPAL+ R D I LP+ R EI
Sbjct: 257 MELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEI 311
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 280 (103.6 bits), Expect = 4.6e-22, P = 4.6e-22
Identities = 102/340 (30%), Positives = 166/340 (48%)
Query: 190 QLTLKPPEKQNESGGDRAQSGDMNARE---GDLCILIF--RSLITSDKPEIEFIKKGSLT 244
Q LKP E++ E +RA+ ++ G L +I ++++++ ++ S
Sbjct: 85 QERLKPQEERQEE--ERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFV 142
Query: 245 S-EELDALVSVL-QLAGRRIYGL--DE--PQLNTSKSEIS----WENIAGYDQQKREIED 294
E+L+ SVL + G+ D+ P ++ K E + + ++ G DQQ +EI++
Sbjct: 143 DKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKE 202
Query: 295 TILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGV 354
+ L L PE Y+++ G R P+ V+ G PGTGKT A+ +ANQ A
Sbjct: 203 AVELPLTHPEYYEEM--GIR------PPKGVILYGCPGTGKTLLAKAVANQTSA-----T 249
Query: 355 PLMYVPLEVVMSKYYGESERLLGKVFSLANELPNG-AIIFLDEVDSFAVAR-DSEM---H 409
L V E++ KY G+ +++ ++F +A E N +I+F+DE+D+ R DS
Sbjct: 250 FLRIVGSELIQ-KYLGDGPKMVRELFRVAEE--NAPSIVFIDEIDAVGTKRYDSNSGGER 306
Query: 410 EATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQ 467
E R +L LL Q+DGF+ V V+ ATNR + LDPALI R D I F LPD + ++
Sbjct: 307 EIQRTMLE-LLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKR 365
Query: 468 EIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
I + +SG DI+ +C +A
Sbjct: 366 RIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEA 405
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 268 (99.4 bits), Expect = 4.8e-22, Sum P(2) = 4.8e-22
Identities = 85/264 (32%), Positives = 133/264 (50%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++E I G D+Q +EI++ I L ++ PE+++ A G +P+ VL GPPGTGKT
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFE--ALGIA------QPKGVLLYGPPGTGKTL 198
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ K+ GE R++ ++F +A E P+ IIF+DE
Sbjct: 199 LARAVAHHTDCT------FIRVSGSELVQKFIGEGARMVRELFVMAREHAPS--IIFMDE 250
Query: 397 VDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS +R S +R + LL Q+DGFE K + VI ATNR LD AL+ R
Sbjct: 251 IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGR 310
Query: 452 FDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSW 508
D I F P+ E R +I +++ M SG +++ VC +A +
Sbjct: 311 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM-Y 369
Query: 509 ASKIIRGQITK-DGEQACLPPLQE 531
A + R +T+ D E A +Q+
Sbjct: 370 ALRERRVHVTQEDFEMAVAKVMQK 393
Score = 47 (21.6 bits), Expect = 4.8e-22, Sum P(2) = 4.8e-22
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 167 LKVEEHGGGSDMGLRAWDSAVAWQLTLKPPEKQNESGGDRAQSGDMNAR 215
++V E GGS GLR + + +L L EK +AQ ++NA+
Sbjct: 9 MEVVESKGGS--GLRQYYLSKIEELQLTVNEKSQNLRRLQAQRNELNAK 55
>TAIR|locus:2133298 [details] [associations]
symbol:AT4G02480 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006487
"protein N-linked glycosylation" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] InterPro:IPR000253 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR008984
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0017111
EMBL:AK229937 IPI:IPI00540740 RefSeq:NP_567238.2 UniGene:At.27891
UniGene:At.54098 ProteinModelPortal:Q0WM93 SMR:Q0WM93 STRING:Q0WM93
PRIDE:Q0WM93 EnsemblPlants:AT4G02480.1 GeneID:827979
KEGG:ath:AT4G02480 TAIR:At4g02480 HOGENOM:HOG000225144
InParanoid:Q0WM93 OMA:STRRQAF PhylomeDB:Q0WM93
ProtClustDB:CLSN2690660 Genevestigator:Q0WM93 Uniprot:Q0WM93
Length = 1265
Score = 293 (108.2 bits), Expect = 5.0e-22, Sum P(3) = 5.0e-22
Identities = 87/289 (30%), Positives = 147/289 (50%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAVLFEGPPGTGK 335
+S+++I + K +++ ++L LQ PE++D K + +P + +L GPPGTGK
Sbjct: 960 VSFDDIGALENVKETLKELVMLPLQRPELFD--------KGQLTKPTKGILLFGPPGTGK 1011
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ +A +AGA + + + + SK++GE E+ + VFSLA+++ ++IF+D
Sbjct: 1012 TMLAKAVATEAGAN------FINISMSSITSKWFGEGEKYVKAVFSLASKIAP-SVIFVD 1064
Query: 396 EVDSFAVARDSE-MHEATRRILSVLLRQIDGFE-QDK-KVVVIAATNRKQDLDPALISRF 452
EVDS R++ HEA R++ + + DG +D+ +V+V+AATNR DLD A+I R
Sbjct: 1065 EVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIRRL 1124
Query: 453 DSMITFGLPDHENRQEIAAQY-AKHXXX--XXXXXXXXXXXXMSGRDIRDVCQQAE---- 505
+ LPD NR +I + AK SG D++++C A
Sbjct: 1125 PRRLMVNLPDATNRSKILSVILAKEEIAPDVDLEAIANMTDGYSGSDLKNLCVTAAHFPI 1184
Query: 506 RSWASKIIRGQITKDGEQACLPPLQEYIESATNRRRSLLDAAEQSHQNI 554
R K + + E PPL Y S T+ R ++ + +H +
Sbjct: 1185 REILEKEKKEKTAAQAENRPTPPL--Y--SCTDVRSLTMNDFKAAHDQV 1229
Score = 48 (22.0 bits), Expect = 5.0e-22, Sum P(3) = 5.0e-22
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 131 PTFTVAVKGQKVTIKFQVPPA--CEIPQ 156
P FTV +G ++I+ Q P+ CE+ Q
Sbjct: 163 PVFTVGRRGCDLSIRDQAMPSTLCELKQ 190
Score = 39 (18.8 bits), Expect = 5.0e-22, Sum P(3) = 5.0e-22
Identities = 9/40 (22%), Positives = 22/40 (55%)
Query: 9 KTASVWRVLTASRASPRGQPRRLPHRSLEQQIRFSASEIQ 48
+++S + AS +SP + P++ + +I +AS ++
Sbjct: 6 RSSSASKRFCASSSSPEASSSQRPNKRSKVKIDAAASSLE 45
>UNIPROTKB|B7PXE3 [details] [associations]
symbol:spas "Spastin" species:6945 "Ixodes scapularis"
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0051013
"microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005737
GO:GO:0005815 Pfam:PF04212 eggNOG:COG0464 GO:GO:0008017
GO:GO:0008568 GO:GO:0051013 GO:GO:0005874 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 OMA:FLNISAA EMBL:DS813618
RefSeq:XP_002400359.1 EnsemblMetazoa:ISCW020482-RA GeneID:8032764
KEGG:isc:IscW_ISCW020482 VectorBase:ISCW020482 CTD:8032764
PhylomeDB:B7PXE3 Uniprot:B7PXE3
Length = 648
Score = 285 (105.4 bits), Expect = 5.4e-22, P = 5.4e-22
Identities = 78/274 (28%), Positives = 136/274 (49%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+ + +IAG + K+ + + ++L PE++ G R P+ +L GPPG GKT
Sbjct: 371 VLFSDIAGQEVAKQALSEMVILPTDRPELFT----GLRAP-----PKGLLLFGPPGNGKT 421
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ +A+++ + + + + SKY GE E+L+ +F++A EL +IIF+DE
Sbjct: 422 MLAKAVAHESNST------FLNISAASLTSKYVGEGEKLVRALFAVAREL-QPSIIFIDE 474
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFE--QDKKVVVIAATNRKQDLDPALISRFDS 454
VDS R HEATRR+ + L + DG +++V+V+ ATNR Q+LD A + RF
Sbjct: 475 VDSLLSERKDNEHEATRRLKTEFLVEFDGLHTGSEERVLVMGATNRPQELDDAALRRFTK 534
Query: 455 MITFGLPDHENR----QEIAAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWAS 510
+ LPDH R +++ ++ SG D+ + + A
Sbjct: 535 RVYVTLPDHNTRVILLEKLLKKHNNPLSADKLKYLARLTEGYSGSDLTALAKDAALGPIR 594
Query: 511 KIIRGQIT-KDGEQACLPPLQEYIESATNRRRSL 543
++ Q+ D ++ LQ++++S RRS+
Sbjct: 595 ELNPEQVRCVDPKKMRNISLQDFLDSLKKVRRSV 628
>FB|FBgn0037375 [details] [associations]
symbol:kat-60L1 "katanin p60-like 1" species:7227 "Drosophila
melanogaster" [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0051013
"microtubule severing" evidence=ISS] [GO:0008352 "katanin complex"
evidence=ISS] [GO:0005875 "microtubule associated complex"
evidence=ISS] [GO:0007017 "microtubule-based process" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016322 "neuron remodeling"
evidence=IMP] [GO:0005874 "microtubule" evidence=IDA] [GO:0050775
"positive regulation of dendrite morphogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:AE014297
GO:GO:0005524 GO:GO:0006200 GO:GO:0016322 GO:GO:0016887
GO:GO:0050775 eggNOG:COG0464 GO:GO:0008017 GO:GO:0051013
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005874
GeneTree:ENSGT00550000074466 GO:GO:0008352 UniGene:Dm.8004
GeneID:40715 KEGG:dme:Dmel_CG1193 CTD:40715 FlyBase:FBgn0037375
ChiTaRS:kat-60L1 GenomeRNAi:40715 NextBio:820217 EMBL:BT023721
RefSeq:NP_001163523.1 RefSeq:NP_001163525.1 SMR:Q4QPP5
STRING:Q4QPP5 EnsemblMetazoa:FBtr0300738 EnsemblMetazoa:FBtr0300740
HOGENOM:HOG000034934 OMA:IQMDGLN Uniprot:Q4QPP5
Length = 673
Score = 285 (105.4 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 83/253 (32%), Positives = 125/253 (49%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAVLFEGPPGTGK 335
I W ++AG ++ K +++ ++L + PE + +G R RP R VL GPPGTGK
Sbjct: 391 IKWTDVAGLNEAKTILQEAVVLPVIMPEFF----KGIR------RPWRGVLMVGPPGTGK 440
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ +A + G V + SKY GESE+L+ +F +A I F+D
Sbjct: 441 TMLAKAVATECGTT------FFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPSTI-FID 493
Query: 396 EVDSFAVARDSEM-HEATRRILSVLLRQIDGFE---QDKKVV-VIAATNRKQDLDPALIS 450
E+D+ +R S+ HEA+RR + LL Q+DG Q++KV+ V+AATN D+D A
Sbjct: 494 EIDALCASRGSDSEHEASRRFKAELLIQMDGLNASMQEEKVIMVLAATNHPWDIDEAFRR 553
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERS 507
RF+ I LP+ R + K + SG DI +VC+ A
Sbjct: 554 RFEKRIYIPLPNEGTRSALLKLCLKDVCLSPSLNTGIIGDELQGYSGSDISNVCRDASMM 613
Query: 508 WASKIIRGQITKD 520
++I G+ T D
Sbjct: 614 AMRRLISGR-TPD 625
>TAIR|locus:2034230 [details] [associations]
symbol:ERH3 "ECTOPIC ROOT HAIR 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IMP] [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0009825 "multidimensional cell growth"
evidence=IMP] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043622 "cortical microtubule organization" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336
GO:GO:0009832 GO:GO:0005874 GO:GO:0043622 GO:GO:0009825
GO:GO:0010091 EMBL:AC018848 KO:K07767 HAMAP:MF_03023
HOGENOM:HOG000225142 OMA:GVMQQIQ EMBL:AF358779 EMBL:AF359248
EMBL:AF048706 EMBL:AB044785 EMBL:AY059919 EMBL:BT000149
IPI:IPI00547205 PIR:B96835 RefSeq:NP_178151.1 UniGene:At.11879
ProteinModelPortal:Q9SEX2 SMR:Q9SEX2 IntAct:Q9SEX2 STRING:Q9SEX2
PaxDb:Q9SEX2 PRIDE:Q9SEX2 EnsemblPlants:AT1G80350.1 GeneID:844375
KEGG:ath:AT1G80350 GeneFarm:2769 TAIR:At1g80350 InParanoid:Q9SEX2
PhylomeDB:Q9SEX2 ProtClustDB:CLSN2691706 BRENDA:3.6.4.3
Genevestigator:Q9SEX2 GermOnline:AT1G80350 Uniprot:Q9SEX2
Length = 523
Score = 282 (104.3 bits), Expect = 6.2e-22, P = 6.2e-22
Identities = 86/257 (33%), Positives = 130/257 (50%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAVLFEGPPGTGK 335
+ W+++AG + KR +E+ ++L L PE + +G R RP + VL GPPGTGK
Sbjct: 236 VRWDDVAGLSEAKRLLEEAVVLPLWMPEYF----QGIR------RPWKGVLMFGPPGTGK 285
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ +A + G V + SK+ GESER++ +F LA I F+D
Sbjct: 286 TLLAKAVATECGTT------FFNVSSATLASKWRGESERMVRCLFDLARAYAPSTI-FID 338
Query: 396 EVDSFAVARD-SEMHEATRRILSVLLRQIDGFE-----QD--KKVV-VIAATNRKQDLDP 446
E+DS +R S HE++RR+ S LL Q+DG +D +K+V V+AATN D+D
Sbjct: 339 EIDSLCNSRGGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDE 398
Query: 447 ALISRFDSMITFGLPDHENRQ---EIAAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQ 503
AL R + I LPD E+R+ I + + SG D+ +VC+
Sbjct: 399 ALRRRLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRD 458
Query: 504 AERSWASKIIRGQITKD 520
A + + I G+ T+D
Sbjct: 459 ASMNGMRRKIAGK-TRD 474
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 278 (102.9 bits), Expect = 7.7e-22, P = 7.7e-22
Identities = 81/237 (34%), Positives = 122/237 (51%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++ +I G D Q +EI++++ L L PE Y+++ G + P+ V+ G PGTGKT
Sbjct: 183 TYADIGGLDSQIQEIKESVELPLTHPEYYEEM--GIK------PPKGVILYGAPGTGKTL 234
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
A+ +ANQ A L V E++ KY G+ +L+ ++F +A E P+ I+F+DE
Sbjct: 235 LAKAVANQTSA-----TFLRVVGSELIQ-KYLGDGPKLVRELFRVAEEHAPS--IVFIDE 286
Query: 397 VDSFAVAR-DSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
+D+ R DS E R +L LL Q+DGF+ V VI ATNR + LDPALI
Sbjct: 287 IDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPG 345
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
R D I F LPD + ++ I + +SG DI+ +C +A
Sbjct: 346 RIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEA 402
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 278 (102.9 bits), Expect = 7.7e-22, P = 7.7e-22
Identities = 81/237 (34%), Positives = 122/237 (51%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++ +I G D Q +EI++++ L L PE Y+++ G + P+ V+ G PGTGKT
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEM--GIK------PPKGVILYGAPGTGKTL 234
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
A+ +ANQ A L V E++ KY G+ +L+ ++F +A E P+ I+F+DE
Sbjct: 235 LAKAVANQTSA-----TFLRVVGSELIQ-KYLGDGPKLVRELFRVAEEHAPS--IVFIDE 286
Query: 397 VDSFAVAR-DSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
+D+ R DS E R +L LL Q+DGF+ V VI ATNR + LDPALI
Sbjct: 287 IDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPG 345
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
R D I F LPD + ++ I + +SG DI+ +C +A
Sbjct: 346 RIDRKIEFPLPDEKTKRRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEA 402
>FB|FBgn0031519 [details] [associations]
symbol:CG3326 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0036078 "minus-end specific microtubule depolymerization"
evidence=IMP] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IMP] [GO:0005694 "chromosome" evidence=IDA] [GO:0051013
"microtubule severing" evidence=IMP] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IMP] [GO:0000091 "mitotic anaphase
A" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005813 GO:GO:0005694 EMBL:AE014134
GO:GO:0000287 GO:GO:0000070 eggNOG:COG0464 GO:GO:0008568
GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336 HSSP:P43773
GeneTree:ENSGT00570000078874 EMBL:AY058790 RefSeq:NP_608763.2
ProteinModelPortal:Q9VQN8 SMR:Q9VQN8 PaxDb:Q9VQN8 PRIDE:Q9VQN8
EnsemblMetazoa:FBtr0077603 EnsemblMetazoa:FBtr0331372 GeneID:33544
KEGG:dme:Dmel_CG3326 UCSC:CG3326-RA FlyBase:FBgn0031519
InParanoid:Q9VQN8 OMA:AWNEIYG OrthoDB:EOG41RN95 PhylomeDB:Q9VQN8
GenomeRNAi:33544 NextBio:784133 Bgee:Q9VQN8 GO:GO:0036078
GO:GO:0000091 Uniprot:Q9VQN8
Length = 523
Score = 281 (104.0 bits), Expect = 8.1e-22, P = 8.1e-22
Identities = 80/234 (34%), Positives = 122/234 (52%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
++WE+IAG + K + I++ L+ P+++ G RC PR VL GPPGTGKT
Sbjct: 247 VAWEDIAGLESAKSTFLEAIIMPLRRPDLFT----GVRCP-----PRGVLLFGPPGTGKT 297
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ IA+QA A + P + SK+ G++E+L+ +F++A AIIF+DE
Sbjct: 298 LIAKSIASQAKAKFFSINP------SSLTSKWVGDAEKLVKTLFAVA-AAHQPAIIFIDE 350
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK--KVVVIAATNRKQDLDPALISRFDS 454
VDS R + +E+T R+ + L +DG ++ +V+VI ATNR Q+LD A+ RF
Sbjct: 351 VDSLLSKRSANENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRRRFVR 410
Query: 455 MITFGLPDHENRQEIAAQY---AKHXXXXXXXXXXXXXXX-MSGRDIRDVCQQA 504
+ LP E RQ+I + KH SG D+ +C+ A
Sbjct: 411 RLYVPLPTREARQKIIEKLIHQVKHNLDVRQVIELAELTDGYSGADVDTLCRYA 464
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 277 (102.6 bits), Expect = 8.2e-22, Sum P(2) = 8.2e-22
Identities = 83/273 (30%), Positives = 134/273 (49%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++E + G DQQ +E+++ I L ++ PE+++ + ++P+ VL GPPGTGKT
Sbjct: 177 TYEMVGGLDQQVKEVKEVIELPVKHPEIFESLG--------ISQPKGVLLYGPPGTGKTL 228
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ KY GE R++ ++F +A E P+ IIF+DE
Sbjct: 229 LARAVAHHTDCT------FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS--IIFMDE 280
Query: 397 VDSFAVARDSEMH--EATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRF 452
+DS R H +R + LL Q+DGFE + + VI TNR LD AL+ R
Sbjct: 281 IDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRI 340
Query: 453 DSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSWA 509
D I F P+ E R EI +++ M SG +++ VC +A +A
Sbjct: 341 DRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGM-FA 399
Query: 510 SKIIRGQITK-DGEQACLPPLQEYIESATNRRR 541
+ R +T+ D E A +++ E R+
Sbjct: 400 LRERRVHVTQEDFEMAVAKVMKQDAEKNFTLRK 432
Score = 38 (18.4 bits), Expect = 8.2e-22, Sum P(2) = 8.2e-22
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 207 AQSGDMNAREGDLC 220
AQ ++NAR +LC
Sbjct: 77 AQRNELNARVRELC 90
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 277 (102.6 bits), Expect = 8.2e-22, Sum P(2) = 8.2e-22
Identities = 83/273 (30%), Positives = 134/273 (49%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++E + G DQQ +E+++ I L ++ PE+++ + ++P+ VL GPPGTGKT
Sbjct: 177 TYEMVGGLDQQVKEVKEVIELPVKHPEIFESLG--------ISQPKGVLLYGPPGTGKTL 228
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ KY GE R++ ++F +A E P+ IIF+DE
Sbjct: 229 LARAVAHHTDCT------FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS--IIFMDE 280
Query: 397 VDSFAVARDSEMH--EATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRF 452
+DS R H +R + LL Q+DGFE + + VI TNR LD AL+ R
Sbjct: 281 IDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRI 340
Query: 453 DSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSWA 509
D I F P+ E R EI +++ M SG +++ VC +A +A
Sbjct: 341 DRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGM-FA 399
Query: 510 SKIIRGQITK-DGEQACLPPLQEYIESATNRRR 541
+ R +T+ D E A +++ E R+
Sbjct: 400 LRERRVHVTQEDFEMAVAKVMKQDAEKNFTLRK 432
Score = 38 (18.4 bits), Expect = 8.2e-22, Sum P(2) = 8.2e-22
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 207 AQSGDMNAREGDLC 220
AQ ++NAR +LC
Sbjct: 77 AQRNELNARVRELC 90
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 285 (105.4 bits), Expect = 8.7e-22, P = 8.7e-22
Identities = 80/297 (26%), Positives = 144/297 (48%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++WE+I G + KRE+++ + ++ P+ + KF + VLF GPPG GK
Sbjct: 471 QVTWEDIGGLEDVKRELQELVQYPVEHPDKF--------LKFGMTPSKGVLFYGPPGCGK 522
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IAN+ A + + +++ ++GESE + ++F A + ++F D
Sbjct: 523 TLLAKAIANECQAN------FISIKGPELLTMWFGESEANVREIFDKARQAAP-CVLFFD 575
Query: 396 EVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
E+DS A AR + + A R+++ +L ++DG K V +I ATNR +DPA++
Sbjct: 576 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 635
Query: 451 RFDSMITFGLPDHENRQEIA-AQYAKH--XXXXXXXXXXXXXXXMSGRDIRDVCQQAERS 507
R D +I LPD ++R I A K SG D+ ++CQ+A +
Sbjct: 636 RLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKL 695
Query: 508 WASKIIRGQITKDGEQACLPPLQEYIES---ATNRRRSLLDAAEQSHQNINNHRTKK 561
+ I +I ++ E+ P E E RR +A + ++++++ +K
Sbjct: 696 AIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 752
Score = 227 (85.0 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 65/158 (41%), Positives = 83/158 (52%)
Query: 322 PRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFS 381
PR +L GPPGTGKT AR +AN+ GA + L+ P +MSK GE E K S
Sbjct: 238 PRGILLYGPPGTGKTLIARAVANETGAFFF----LINGP--EIMSKLAGEGESACRKKIS 291
Query: 382 LANELPNGAIIFLDEVDSFAVARDSEMH-EATRRILSVLLRQIDGFEQDKKVVVIAATNR 440
A A IF + D F + H E RRI+S LL +DG +Q V+V+AATNR
Sbjct: 292 PAPPPLKTAGIFKSD-DCFP---SPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNR 347
Query: 441 KQDLDPAL--ISRFDSMITFGLPDHENRQEIAAQYAKH 476
+DPAL RFD + G+PD R EI + K+
Sbjct: 348 PNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 385
>MGI|MGI:1917722 [details] [associations]
symbol:Atad2 "ATPase family, AAA domain containing 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
MGI:MGI:1917722 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0006200 GO:GO:0006351 GO:GO:0016887 eggNOG:COG0464
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 CTD:29028
HOVERGEN:HBG080873 ChiTaRS:ATAD2 EMBL:AK029867 EMBL:AK134319
IPI:IPI00135252 IPI:IPI00228860 RefSeq:NP_081711.2
UniGene:Mm.221758 ProteinModelPortal:Q8CDM1 SMR:Q8CDM1
IntAct:Q8CDM1 STRING:Q8CDM1 PhosphoSite:Q8CDM1 PRIDE:Q8CDM1
GeneID:70472 KEGG:mmu:70472 UCSC:uc007vtf.1 UCSC:uc007vtg.1
HOGENOM:HOG000034119 InParanoid:Q3UYW6 NextBio:331701
CleanEx:MM_ATAD2 Genevestigator:Q8CDM1
GermOnline:ENSMUSG00000022360 Uniprot:Q8CDM1
Length = 1040
Score = 293 (108.2 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 77/213 (36%), Positives = 111/213 (52%)
Query: 259 GRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFE 318
G + +D QL+TS + ++++ G +++ ++ L PEV++ KF+
Sbjct: 63 GASLADVDPMQLDTS---VRFDSVGGLSSHIAALKEMVVFPLLYPEVFE--------KFK 111
Query: 319 SNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGK 378
PR LF GPPGTGKT AR +AN+ + M + +SK+ GESER L
Sbjct: 112 IQPPRGCLFYGPPGTGKTLVARALANECSRGDKRVAFFMRKGADC-LSKWVGESERQLRL 170
Query: 379 VFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAAT 438
+F A ++ AIIF DE+D A R S + I+S LL +DG + ++VVI AT
Sbjct: 171 LFDQAYQM-RPAIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGAT 229
Query: 439 NRKQDLDPALI--SRFDSMITFGLPDHENRQEI 469
NR +DPAL RFD F LPD R+EI
Sbjct: 230 NRLDSIDPALRRPGRFDREFLFSLPDKNARKEI 262
Score = 39 (18.8 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 504 AERSWASKIIRGQITKDGEQACLPPLQE 531
A R A II+ ++ +D EQ C +QE
Sbjct: 729 ALRDTAYAIIKEELDEDFEQLC-EEIQE 755
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 276 (102.2 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 85/277 (30%), Positives = 135/277 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L PE + ++ E P+ VL GPPGT
Sbjct: 169 KPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLG------IEP--PKGVLLFGPPGT 220
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A +IF
Sbjct: 221 GKTLCARAVANRTDACF-----IRVIGSELVQ-KYVGEGARMVRELFEMARS-KKACLIF 273
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 274 FDEIDAIGGARFDDGAGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D + FGLPD + R I +A+ +G +IR VC +A
Sbjct: 333 RPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEA 392
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 393 GM-FAIRARRKVATEKDFLEAVKKVIKSYAKFSATPR 428
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 275 (101.9 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 88/290 (30%), Positives = 142/290 (48%)
Query: 267 EPQLNTSKSE----ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP 322
+P +N K E +++ I G DQQ +EI++ I L ++ PE+++ + +P
Sbjct: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIA--------QP 195
Query: 323 RAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSL 382
+ VL GPPGTGKT AR +A+ + V ++ KY GE R++ ++F +
Sbjct: 196 KGVLLYGPPGTGKTLLARAVAHHTDCT------FIRVSGSELVQKYIGEGSRMVRELFVM 249
Query: 383 ANE-LPNGAIIFLDEVDSFAVAR----DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAA 437
A E P+ IIF+DE+DS AR +R + LL Q+DGFE K+ V+ A
Sbjct: 250 AREHAPS--IIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMA 307
Query: 438 TNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM--- 492
TNR LD AL+ R D I F P+ E+R +I +++ M
Sbjct: 308 TNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGA 367
Query: 493 SGRDIRDVCQQAERSWASKIIRGQITK-DGEQACLPPLQEYIESATNRRR 541
SG +++ VC +A +A + R +T+ D E A +++ E + R+
Sbjct: 368 SGAELKAVCTEAGM-FALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRK 416
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 275 (101.9 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 88/290 (30%), Positives = 142/290 (48%)
Query: 267 EPQLNTSKSE----ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP 322
+P +N K E +++ I G DQQ +EI++ I L ++ PE+++ + +P
Sbjct: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIA--------QP 195
Query: 323 RAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSL 382
+ VL GPPGTGKT AR +A+ + V ++ KY GE R++ ++F +
Sbjct: 196 KGVLLYGPPGTGKTLLARAVAHHTDCT------FIRVSGSELVQKYIGEGSRMVRELFVM 249
Query: 383 ANE-LPNGAIIFLDEVDSFAVAR----DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAA 437
A E P+ IIF+DE+DS AR +R + LL Q+DGFE K+ V+ A
Sbjct: 250 AREHAPS--IIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMA 307
Query: 438 TNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM--- 492
TNR LD AL+ R D I F P+ E+R +I +++ M
Sbjct: 308 TNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGA 367
Query: 493 SGRDIRDVCQQAERSWASKIIRGQITK-DGEQACLPPLQEYIESATNRRR 541
SG +++ VC +A +A + R +T+ D E A +++ E + R+
Sbjct: 368 SGAELKAVCTEAGM-FALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRK 416
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 283 (104.7 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 71/204 (34%), Positives = 112/204 (54%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+I+++ + G +Q ++ TI L L +P ++ D F + PR +L GPPGTGK
Sbjct: 225 QITYDQVGGLSKQIELLKSTIELPLNNPTLFSD--------FGISPPRGILLHGPPGTGK 276
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T R +AN ++ + ++SKY GE+E + +F+ A + +IIF+D
Sbjct: 277 TMLLRCVANSITE-----AHVLTINGPSIVSKYLGETENAIRDIFNEAKKF-QPSIIFMD 330
Query: 396 EVDSFAVARDSE-MHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRF 452
E+DS A +R S+ E R+++ LL +DG + ++VVI ATNR +D AL RF
Sbjct: 331 EIDSIAPSRTSDDSGETESRVVAQLLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRF 390
Query: 453 DSMITFGLPDHENRQEIAA-QYAK 475
D + G+PD E R+EI Q+AK
Sbjct: 391 DQEVEIGIPDVEAREEILTKQFAK 414
Score = 262 (97.3 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 64/197 (32%), Positives = 110/197 (55%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
++ W +I G ++ KR++ + + L L++ + + ++ G + P+ VL GPPG K
Sbjct: 495 KVHWSDIGGQEELKRKLIEVVQLPLEASDSFKNL--GV------SSPKGVLLYGPPGCSK 546
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ +A ++G + + V + +KY GESER + ++F A + +IIF D
Sbjct: 547 TLTAKALATESG------LNFLAVKGPEIFNKYVGESERAIREIFRKARAA-SPSIIFFD 599
Query: 396 EVDSFAVARDSEMHE-ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRF 452
E+D+ A RD + A +L+ LL +IDG E+ K VV++ ATN+ ++DPAL+ R
Sbjct: 600 EIDAIAGDRDGDSSTTAASNVLTSLLNEIDGVEELKGVVIVGATNKPTEIDPALLRPGRL 659
Query: 453 DSMITFGLPDHENRQEI 469
D I PD++ R +I
Sbjct: 660 DRHIYVAPPDYDARLQI 676
>UNIPROTKB|E2R3K3 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001578 "microtubule bundle
formation" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051329 "interphase of
mitotic cell cycle" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0031122 "cytoplasmic microtubule organization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0001764 GO:GO:0008104 GO:GO:0005811
GO:GO:0030424 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0031122
KO:K07767 GeneTree:ENSGT00550000074466 CTD:11104 OMA:SQYSDPK
GO:GO:0051329 EMBL:AAEX03000265 RefSeq:XP_533445.1
ProteinModelPortal:E2R3K3 Ensembl:ENSCAFT00000000603 GeneID:476240
KEGG:cfa:476240 Uniprot:E2R3K3
Length = 491
Score = 278 (102.9 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 91/299 (30%), Positives = 140/299 (46%)
Query: 267 EPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAV 325
E + + + W++IA + K+ +++ ++L + PE + +G R RP + V
Sbjct: 196 ERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFF----KGIR------RPWKGV 245
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
L GPPGTGKT A+ +A + V + SKY GESE+L+ +F +A
Sbjct: 246 LMVGPPGTGKTLLAKAVATECKTT------FFNVSSSTLTSKYRGESEKLVRLLFEMAR- 298
Query: 386 LPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDGF----EQD---KKVVVIAA 437
+ A IF+DE+DS R SE HEA+RR+ + LL Q+DG E D K V+V+AA
Sbjct: 299 FYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAA 358
Query: 438 TNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SG 494
TN D+D AL R + I LP + R+E+ + M SG
Sbjct: 359 TNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSG 418
Query: 495 RDIRDVCQQAERSWASKIIRGQITKD-----GEQACLPPLQEYIESATNRRRSLLDAAE 548
DI +VC+ A + I G ++ E+ +P E E A + + AA+
Sbjct: 419 ADITNVCRDASLMAMRRRIEGLTPEEIRNLSREEMHMPTTMEDFEMALKKVSKSVSAAD 477
Score = 130 (50.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 55/169 (32%), Positives = 83/169 (49%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEV-YDDIARGTRCKFESNRPRAVL----- 326
++ E S + GYD+ E + ++S Q+P V +DDIA K + + VL
Sbjct: 175 TEPETSKFDSTGYDKDLVEALERDIIS-QNPNVRWDDIADLVEAK-KLLKEAVVLPMWMP 232
Query: 327 --FEG---P-PGT---GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLG 377
F+G P G G + + +A A + V + SKY GESE+L+
Sbjct: 233 EFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECK-TTFFNVSSSTLTSKYRGESEKLVR 291
Query: 378 KVFSLANELPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDG 425
+F +A + A IF+DE+DS R SE HEA+RR+ + LL Q+DG
Sbjct: 292 LLFEMAR-FYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDG 339
>UNIPROTKB|E1BH39 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051329 "interphase of mitotic cell cycle"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001578 "microtubule bundle formation" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005813
GO:GO:0001764 GO:GO:0008104 GO:GO:0005811 GO:GO:0030424
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0000922 GO:GO:0031122 KO:K07767
GeneTree:ENSGT00550000074466 CTD:11104 OMA:SQYSDPK GO:GO:0051329
EMBL:DAAA02027051 IPI:IPI00706925 RefSeq:NP_001179032.1
UniGene:Bt.41985 ProteinModelPortal:E1BH39
Ensembl:ENSBTAT00000001172 GeneID:506715 KEGG:bta:506715
NextBio:20867726 Uniprot:E1BH39
Length = 491
Score = 278 (102.9 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 91/299 (30%), Positives = 140/299 (46%)
Query: 267 EPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAV 325
E + + + W++IA + K+ +++ ++L + PE + +G R RP + V
Sbjct: 196 ERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFF----KGIR------RPWKGV 245
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
L GPPGTGKT A+ +A + V + SKY GESE+L+ +F +A
Sbjct: 246 LMVGPPGTGKTLLAKAVATECKTT------FFNVSSSTLTSKYRGESEKLVRLLFEMAR- 298
Query: 386 LPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDGF----EQD---KKVVVIAA 437
+ A IF+DE+DS R SE HEA+RR+ + LL Q+DG E D K V+V+AA
Sbjct: 299 FYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAA 358
Query: 438 TNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SG 494
TN D+D AL R + I LP + R+E+ + M SG
Sbjct: 359 TNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSG 418
Query: 495 RDIRDVCQQAERSWASKIIRGQITKD-----GEQACLPPLQEYIESATNRRRSLLDAAE 548
DI +VC+ A + I G ++ E+ +P E E A + + AA+
Sbjct: 419 ADITNVCRDASLMAMRRRIEGLTPEEIRNLSREEMHMPTTMEDFEMALKKVSKSVSAAD 477
Score = 128 (50.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 53/158 (33%), Positives = 78/158 (49%)
Query: 284 GYDQQKREIEDTILLSLQSPEV-YDDIARGTRCKFESNRPRAVL-------FEG---P-P 331
GYD+ E + ++S Q+P V +DDIA K + + VL F+G P
Sbjct: 186 GYDKDLVEALERDIIS-QNPNVRWDDIADLVEAK-KLLKEAVVLPMWMPEFFKGIRRPWK 243
Query: 332 GT---GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPN 388
G G + + +A A + V + SKY GESE+L+ +F +A +
Sbjct: 244 GVLMVGPPGTGKTLLAKAVATECK-TTFFNVSSSTLTSKYRGESEKLVRLLFEMAR-FYS 301
Query: 389 GAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDG 425
A IF+DE+DS R SE HEA+RR+ + LL Q+DG
Sbjct: 302 PATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDG 339
>UNIPROTKB|O75449 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0031122
"cytoplasmic microtubule organization" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IDA]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0051329
"interphase of mitotic cell cycle" evidence=IMP] [GO:0000922
"spindle pole" evidence=IDA] [GO:0030496 "midbody" evidence=IDA]
[GO:0005819 "spindle" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005813 GO:GO:0001764
Pathway_Interaction_DB:lis1pathway GO:GO:0008104 GO:GO:0051301
GO:GO:0007067 GO:GO:0005811 EMBL:CH471051 GO:GO:0030424
GO:GO:0043025 GO:GO:0030426 eggNOG:COG0464 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0000922 GO:GO:0005874 GO:GO:0031122
HOVERGEN:HBG057074 GO:GO:0010977 EMBL:AL078581 KO:K07767
HAMAP:MF_03023 HOGENOM:HOG000225142 CTD:11104 OMA:SQYSDPK
OrthoDB:EOG4CJVGZ GO:GO:0051329 EMBL:AF056022 EMBL:BX276089
EMBL:BC050428 IPI:IPI00013075 IPI:IPI00384339 RefSeq:NP_001191005.1
RefSeq:NP_008975.1 UniGene:Hs.450175 ProteinModelPortal:O75449
SMR:O75449 STRING:O75449 PhosphoSite:O75449 PaxDb:O75449
PRIDE:O75449 Ensembl:ENST00000335643 Ensembl:ENST00000335647
Ensembl:ENST00000367411 GeneID:11104 KEGG:hsa:11104 UCSC:uc003qmr.2
UCSC:uc003qmt.3 GeneCards:GC06M149957 HGNC:HGNC:6216 HPA:HPA036207
MIM:606696 neXtProt:NX_O75449 PharmGKB:PA30017 InParanoid:O75449
ChiTaRS:KATNA1 GenomeRNAi:11104 NextBio:42220 ArrayExpress:O75449
Bgee:O75449 CleanEx:HS_KATNA1 Genevestigator:O75449 Uniprot:O75449
Length = 491
Score = 278 (102.9 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 91/299 (30%), Positives = 140/299 (46%)
Query: 267 EPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAV 325
E + + + W++IA + K+ +++ ++L + PE + +G R RP + V
Sbjct: 196 ERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFF----KGIR------RPWKGV 245
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
L GPPGTGKT A+ +A + V + SKY GESE+L+ +F +A
Sbjct: 246 LMVGPPGTGKTLLAKAVATECKTT------FFNVSSSTLTSKYRGESEKLVRLLFEMAR- 298
Query: 386 LPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDGF----EQD---KKVVVIAA 437
+ A IF+DE+DS R SE HEA+RR+ + LL Q+DG E D K V+V+AA
Sbjct: 299 FYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAA 358
Query: 438 TNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SG 494
TN D+D AL R + I LP + R+E+ + M SG
Sbjct: 359 TNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSG 418
Query: 495 RDIRDVCQQAERSWASKIIRGQITKD-----GEQACLPPLQEYIESATNRRRSLLDAAE 548
DI +VC+ A + I G ++ E+ +P E E A + + AA+
Sbjct: 419 ADITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMHMPTTMEDFEMALKKVSKSVSAAD 477
Score = 128 (50.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 53/158 (33%), Positives = 78/158 (49%)
Query: 284 GYDQQKREIEDTILLSLQSPEV-YDDIARGTRCKFESNRPRAVL-------FEG---P-P 331
GYD+ E + ++S Q+P V +DDIA K + + VL F+G P
Sbjct: 186 GYDKDLVEALERDIIS-QNPNVRWDDIADLVEAK-KLLKEAVVLPMWMPEFFKGIRRPWK 243
Query: 332 GT---GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPN 388
G G + + +A A + V + SKY GESE+L+ +F +A +
Sbjct: 244 GVLMVGPPGTGKTLLAKAVATECK-TTFFNVSSSTLTSKYRGESEKLVRLLFEMAR-FYS 301
Query: 389 GAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDG 425
A IF+DE+DS R SE HEA+RR+ + LL Q+DG
Sbjct: 302 PATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDG 339
>UNIPROTKB|Q4R407 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9541 "Macaca fascicularis" [GO:0000922 "spindle pole"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005819
"spindle" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 GO:GO:0005815 HSSP:Q01853
GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 HOVERGEN:HBG057074 HAMAP:MF_03023 EMBL:AB179108
ProteinModelPortal:Q4R407 Uniprot:Q4R407
Length = 491
Score = 278 (102.9 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 91/299 (30%), Positives = 140/299 (46%)
Query: 267 EPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAV 325
E + + + W++IA + K+ +++ ++L + PE + +G R RP + V
Sbjct: 196 ERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFF----KGIR------RPWKGV 245
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
L GPPGTGKT A+ +A + V + SKY GESE+L+ +F +A
Sbjct: 246 LMVGPPGTGKTLLAKAVATECKTT------FFNVSSSTLTSKYRGESEKLVRLLFEMAR- 298
Query: 386 LPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDGF----EQD---KKVVVIAA 437
+ A IF+DE+DS R SE HEA+RR+ + LL Q+DG E D K V+V+AA
Sbjct: 299 FYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAA 358
Query: 438 TNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SG 494
TN D+D AL R + I LP + R+E+ + M SG
Sbjct: 359 TNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSG 418
Query: 495 RDIRDVCQQAERSWASKIIRGQITKD-----GEQACLPPLQEYIESATNRRRSLLDAAE 548
DI +VC+ A + I G ++ E+ +P E E A + + AA+
Sbjct: 419 ADITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMHMPTTMEDFEMALKKVSKSVSAAD 477
Score = 128 (50.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 53/158 (33%), Positives = 78/158 (49%)
Query: 284 GYDQQKREIEDTILLSLQSPEV-YDDIARGTRCKFESNRPRAVL-------FEG---P-P 331
GYD+ E + ++S Q+P V +DDIA K + + VL F+G P
Sbjct: 186 GYDKDLVEALERDIIS-QNPNVRWDDIADLVEAK-KLLKEAVVLPMWMPEFFKGIRRPWK 243
Query: 332 GT---GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPN 388
G G + + +A A + V + SKY GESE+L+ +F +A +
Sbjct: 244 GVLMVGPPGTGKTLLAKAVATECK-TTFFNVSSSTLTSKYRGESEKLVRLLFEMAR-FYS 301
Query: 389 GAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDG 425
A IF+DE+DS R SE HEA+RR+ + LL Q+DG
Sbjct: 302 PATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDG 339
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 290 (107.1 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 85/281 (30%), Positives = 146/281 (51%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++++ I G + Q +EI + I L L+ PE++ + PR VL GPPGTGK
Sbjct: 340 KVTYDMIGGLNSQLKEIREIIELPLKQPELFKS--------YGIPPPRGVLLYGPPGTGK 391
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T AR +AN+ GA V ++ P E++ SK+YGE+E L ++F+ A L + +IIF+D
Sbjct: 392 TMIARAVANEVGAY----VSVINGP-EII-SKFYGETEARLRQIFAEAT-LRHPSIIFID 444
Query: 396 EVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALI--S 450
E+D+ R+ +E +R+++ LL +DG + +V+V+ ATNR LD AL
Sbjct: 445 ELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPG 504
Query: 451 RFDSMITFGLPDHENRQEIAAQYAK---HXXXXXXXXXXXXXXX-MSGRDIRDVCQQAER 506
RFD I G+P+ ++R +I + + H G D++ +C +A
Sbjct: 505 RFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGL 564
Query: 507 SWASKIIRGQIT-KDGEQACLPP--LQEYIESATNRRRSLL 544
+++R Q D + A L L+++++ + R S +
Sbjct: 565 HALRRVLRRQPNLPDSKMAGLVKITLKDFLQGMNDIRPSAM 605
Score = 228 (85.3 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 58/171 (33%), Positives = 93/171 (54%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+SW +I G + K +++ + L+ PE + + G + P+ VL GPPG KT
Sbjct: 615 VSWSDIGGLENVKLKLKQAVEWPLKHPESFTQM--GIQ------PPKGVLLYGPPGCSKT 666
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ +AN++G + + + +M+KY GESER + ++F A + +IIF DE
Sbjct: 667 MIAKALANESG------LNFLAIKGPELMNKYVGESERAVREIFRKARAVAP-SIIFFDE 719
Query: 397 VDSFAVARDSEMH--EATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLD 445
+D+ AV R S R+L+ LL ++DG EQ K V ++AATNR +D
Sbjct: 720 LDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAATNRPDRID 770
Score = 37 (18.1 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 29/138 (21%), Positives = 56/138 (40%)
Query: 132 TFTVAVKGQKVTIKFQVPPACEIPQLIANLVSHLGLKVEEHGG---GSDMGLRAWDSA-- 186
T + G V I F ++P+ N + LGL + G + L + D
Sbjct: 28 TASAVAPGTLVVINFLEKVDDKVPKAFQNSLVQLGLNTMKSANICIGRPVLLTSLDGKQE 87
Query: 187 --VAWQLTLKPPEKQNESGGDRAQSGDMNAREGDLCIL--IFRSLITSDKPEIEFIKKGS 242
AW + P K S + AQ ++ R GD + + +++ +++ ++ K +
Sbjct: 88 VYTAWPVAGFPGGKVGLS--EVAQK-NVGVRVGDAIHVQPVLGAVLQAEELDVALSDKNA 144
Query: 243 LTSEELDALVSVLQLAGR 260
+EE A + +L G+
Sbjct: 145 DINEEQLAGCILRKLDGK 162
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 274 (101.5 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 78/236 (33%), Positives = 121/236 (51%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++E + G D+Q +EI++ I L ++ PE++D A G +P+ VL GPPGTGKT
Sbjct: 157 TYEMVGGLDKQIKEIKEVIELPVKHPELFD--ALGIA------QPKGVLLFGPPGTGKTL 208
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ K+ GE R++ ++F +A E P+ IIF+DE
Sbjct: 209 LARAVAHHTECT------FIRVSGSELVQKFIGEGARMVRELFVMAREHAPS--IIFMDE 260
Query: 397 VDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS +R S +R + LL Q+DGFE K + VI ATNR LDPAL+ R
Sbjct: 261 IDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGR 320
Query: 452 FDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
D I F PD + R +I +++ + SG +++ VC +A
Sbjct: 321 IDRKIEFPAPDEKARADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEA 376
>ZFIN|ZDB-GENE-030131-5754 [details] [associations]
symbol:wu:fi16e04 "wu:fi16e04" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS00674
PROSITE:PS50014 SMART:SM00297 SMART:SM00382
ZFIN:ZDB-GENE-030131-5754 GO:GO:0005524 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074694 EMBL:CABZ01038330
IPI:IPI00901018 Ensembl:ENSDART00000111963 Uniprot:E7EXJ5
Length = 1358
Score = 294 (108.6 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 82/252 (32%), Positives = 123/252 (48%)
Query: 259 GRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFE 318
G + +D Q++ + + +++I G + +++ ++ L PEV++ KF+
Sbjct: 372 GASLADVDPMQIDQT---VRFDSIGGLGKHISALKEMVVFPLLYPEVFE--------KFK 420
Query: 319 SNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGK 378
PR LF GPPGTGKT AR +AN+ + M + +SK+ GESER L
Sbjct: 421 IQPPRGCLFYGPPGTGKTLVARALANECSQGERKVAFFMRKGADC-LSKWVGESERQLRL 479
Query: 379 VFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAAT 438
+F A ++ +IIF DE+D A R S + I+S LL +DG + +VVVI AT
Sbjct: 480 LFDQAYQM-RPSIIFFDEIDGIAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEVVVIGAT 538
Query: 439 NRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKH----XXXXXXXXXXXXXXXM 492
NR +DPAL RFD F LPD E R++I + +H
Sbjct: 539 NRLDSIDPALRRPGRFDREFLFNLPDREARKDILKIHTRHWDPQLSDAFLEELADKCVGY 598
Query: 493 SGRDIRDVCQQA 504
G DI+ VC +A
Sbjct: 599 CGTDIKAVCAEA 610
Score = 40 (19.1 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 170 EEHGGGSDMGLRAWDSAVAWQLTLKPPEKQN 200
+E G R + V +Q L+ P+KQ+
Sbjct: 245 DEEDNGKRYDFRQRKAVVRYQAPLEEPKKQS 275
>UNIPROTKB|E1BC78 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:DAAA02038173 EMBL:DAAA02038174
IPI:IPI00923885 Ensembl:ENSBTAT00000061524 Uniprot:E1BC78
Length = 1372
Score = 295 (108.9 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 84/265 (31%), Positives = 127/265 (47%)
Query: 246 EELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEV 305
+EL + G + +D QL++S + ++++ G +++ ++ L PEV
Sbjct: 381 DELKGIYKDRMKIGASLADVDPMQLDSS---VRFDSVGGLSNHIAALKEMVVFPLLYPEV 437
Query: 306 YDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVM 365
++ KF+ PR LF GPPGTGKT AR +AN+ + M + +
Sbjct: 438 FE--------KFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADC-L 488
Query: 366 SKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDG 425
SK+ GESER L +F A ++ +IIF DE+D A R S + I+S LL +DG
Sbjct: 489 SKWVGESERQLRLLFDQAYQM-RPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDG 547
Query: 426 FEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXX 483
+ ++VVI ATNR +DPAL RFD F LPD + R+EI + +
Sbjct: 548 LDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKDARKEILKIHTRDWNPKPLD 607
Query: 484 XXXXXXXXMS----GRDIRDVCQQA 504
S G DI+ VC +A
Sbjct: 608 MFLEELAENSVGYCGADIKSVCSEA 632
Score = 39 (18.8 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 504 AERSWASKIIRGQITKDGEQACLPPLQE 531
A R A II+ ++ +D EQ C +QE
Sbjct: 1066 ALRDTAYAIIKEELDEDFEQLC-EEIQE 1092
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 275 (101.9 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 89/267 (33%), Positives = 138/267 (51%)
Query: 269 QLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFE 328
+++ S +E S+ +I G + Q +EI++++ L L PE+Y+++ G + P+ V+
Sbjct: 172 KMDKSPTE-SYSDIGGLESQIQEIKESVELPLTHPELYEEM--GIK------PPKGVILY 222
Query: 329 GPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPN 388
G PGTGKT A+ +ANQ A L V E++ KY G+ RL ++F +A E N
Sbjct: 223 GAPGTGKTLLAKAVANQTSA-----TFLRIVGSELIQ-KYLGDGPRLCRQIFKVAGE--N 274
Query: 389 G-AIIFLDEVDSFAVAR-DSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQD 443
+I+F+DE+D+ R DS E R +L LL Q+DGF+ V VI ATN+ +
Sbjct: 275 APSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDDRGDVKVIMATNKIET 333
Query: 444 LDPALI--SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIR 498
LDPALI R D I F PD +++I + +SG DI+
Sbjct: 334 LDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQ 393
Query: 499 DVCQQAERSWASKIIRGQIT-KDGEQA 524
+C +A A + R Q+T +D +QA
Sbjct: 394 AMCTEAGLL-ALRERRMQVTAEDFKQA 419
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 282 (104.3 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 99/378 (26%), Positives = 168/378 (44%)
Query: 156 QLIANLVSHLGLKVEEHGGGSDMGLRAWDSAVAWQLTLKPPEKQNESGGDRAQSGDMNAR 215
Q+ + +G V + GLR+ D A + + + G QSG A+
Sbjct: 190 QIYLKALERVGGGVSAPAANLNQGLRS-DQIQAVGQAVAAQNQGGQIGISSKQSGT-GAK 247
Query: 216 EGDLCILIFRSLITSDKPEIEFIKKG-SLTSEELDALVSVLQLAG--RRIYGLDEPQLNT 272
E L +++ SL ++ ++FI + + L VL+ G + I G +
Sbjct: 248 EAPLYVVVEESLGSAVFRWVKFIVLFCAFAYASMIVLSIVLETTGVLKNIKGPHSNEAQP 307
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
+ + ++ G D+ K E+++ + L +PE + + P+ VL GPPG
Sbjct: 308 EHQTVRFSDVHGCDEAKDELQELVEFLL-NPERFSSLG--------GKLPKGVLLVGPPG 358
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +A +AG VP Y+ Y G + + ++F+ A + AII
Sbjct: 359 TGKTLLARAVAGEAG------VPFFYMSGSEFDEVYVGVGAKRVRELFNQARS-KSPAII 411
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
F+DE+D+ R+ ++ L+ LL ++DGF Q V+++AATN + LD AL
Sbjct: 412 FIDELDAIGAKRNERDAAYVKQTLNQLLTELDGFSQSTGVIILAATNYPELLDKALTRPG 471
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXX---XXXXXXXXXMSGRDIRDVCQQAERS 507
RFD + LPD R +I + K+ SG D+ ++ QA
Sbjct: 472 RFDRKVVVDLPDVRGRMDILKHHMKNVQISTDVDVAVIARGTSGFSGADLENLVNQAA-I 530
Query: 508 WASKIIRGQIT-KDGEQA 524
+AS+ + ++T KD + A
Sbjct: 531 FASRNKQSKVTPKDFDYA 548
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 278 (102.9 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 75/214 (35%), Positives = 114/214 (53%)
Query: 265 LDEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRA 324
L+ + S I++ ++AG D+ K E+ + + LQ+P+ Y + F P+
Sbjct: 137 LESSHIKPVISNITFNDVAGVDEVKMELSELVDF-LQNPKKYKE--------FGVKMPKG 187
Query: 325 VLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLAN 384
VL GPPG GKT A+ +A +AG VP Y + Y G + + ++FS A
Sbjct: 188 VLMVGPPGVGKTLIAKAVAGEAG------VPFFYQSGSSFVEIYVGMGAKRVRELFSKAK 241
Query: 385 ELPNGAIIFLDEVDSFAVARDSEMHEATR-RILSVLLRQIDGFEQDKKVVVIAATNRKQD 443
+ +I+F+DE+D+ AR EM R L+ LL Q+DGFE + V+VIAATN+ +
Sbjct: 242 MMAP-SIVFIDEIDAVGKAR-GEMSNVERDSTLNQLLTQMDGFEDNSGVIVIAATNKIEL 299
Query: 444 LDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 475
+DPAL+ RFD I LPD ++R +I Y K
Sbjct: 300 MDPALLRSGRFDRRIFLSLPDFKDRLKILEIYMK 333
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 272 (100.8 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 81/239 (33%), Positives = 114/239 (47%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K +IS+ +I G D QK+EI + + L L ++Y I + PR VL GPPG
Sbjct: 146 KPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIG--------IDPPRGVLLFGPPGC 197
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT A+ +A+ A + V E V KY GE R++ +F LA + + +IIF
Sbjct: 198 GKTMLAKAVAHHTTASF-----IRVVGSEFVQ-KYLGEGPRMVRDLFRLAKQ-NSPSIIF 250
Query: 394 LDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI- 449
+DE+D+ A R A R RIL LL Q+DGF++ + VI ATNR LDPAL+
Sbjct: 251 IDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLR 310
Query: 450 -SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRDVCQQA 504
R D I LPD ++ + +S DI +CQ+A
Sbjct: 311 PGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEA 369
>UNIPROTKB|Q6PL18 [details] [associations]
symbol:ATAD2 "ATPase family AAA domain-containing protein
2" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006355 GO:GO:0006200 GO:GO:0006351
GO:GO:0016887 eggNOG:COG0464 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 EMBL:AY598335 EMBL:CR749832 EMBL:AL833653
EMBL:BC010686 EMBL:BC019909 EMBL:BC113656 EMBL:AK097133
EMBL:AF118088 IPI:IPI00170548 IPI:IPI00470801 RefSeq:NP_054828.2
UniGene:Hs.370834 PDB:3DAI PDBsum:3DAI ProteinModelPortal:Q6PL18
SMR:Q6PL18 DIP:DIP-46197N STRING:Q6PL18 PhosphoSite:Q6PL18
DMDM:74762365 PaxDb:Q6PL18 PRIDE:Q6PL18 DNASU:29028
Ensembl:ENST00000287394 GeneID:29028 KEGG:hsa:29028 UCSC:uc003yqh.4
CTD:29028 GeneCards:GC08M124401 H-InvDB:HIX0007764 HGNC:HGNC:30123
HPA:CAB056158 HPA:HPA019860 HPA:HPA029424 MIM:611941
neXtProt:NX_Q6PL18 PharmGKB:PA134895566 HOVERGEN:HBG080873
InParanoid:Q6PL18 OMA:PSVYENG OrthoDB:EOG441Q9S PhylomeDB:Q6PL18
ChiTaRS:ATAD2 EvolutionaryTrace:Q6PL18 GenomeRNAi:29028
NextBio:51959 ArrayExpress:Q6PL18 Bgee:Q6PL18 CleanEx:HS_ATAD2
Genevestigator:Q6PL18 GermOnline:ENSG00000156802 Uniprot:Q6PL18
Length = 1390
Score = 294 (108.6 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 78/226 (34%), Positives = 116/226 (51%)
Query: 246 EELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEV 305
+EL + G + +D QL++S + ++++ G +++ ++ L PEV
Sbjct: 395 DELKGIYKDRMKIGASLADVDPMQLDSS---VRFDSVGGLSNHIAALKEMVVFPLLYPEV 451
Query: 306 YDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVM 365
++ KF+ PR LF GPPGTGKT AR +AN+ + M + +
Sbjct: 452 FE--------KFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADC-L 502
Query: 366 SKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDG 425
SK+ GESER L +F A ++ +IIF DE+D A R S + I+S LL +DG
Sbjct: 503 SKWVGESERQLRLLFDQAYQM-RPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDG 561
Query: 426 FEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 469
+ ++VVI ATNR +DPAL RFD F LPD E R+EI
Sbjct: 562 LDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEI 607
Score = 39 (18.8 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 504 AERSWASKIIRGQITKDGEQACLPPLQE 531
A R A II+ ++ +D EQ C +QE
Sbjct: 1080 ALRDTAYAIIKEELDEDFEQLC-EEIQE 1106
>UNIPROTKB|D4A9R0 [details] [associations]
symbol:LOC500625 "Protein LOC500625" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00550000074694 IPI:IPI00471839
Ensembl:ENSRNOT00000052041 RGD:1566199 ArrayExpress:D4A9R0
Uniprot:D4A9R0
Length = 419
Score = 273 (101.2 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 72/199 (36%), Positives = 102/199 (51%)
Query: 266 DEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAV 325
D +N KS + +++I G +++ ++ L PE+++ KF+ PR
Sbjct: 226 DVDPMNIDKS-VRFDSIGGLSHHIHALKEMVVFPLLYPEIFE--------KFKIQPPRGC 276
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
LF GPPGTGKT AR +AN+ + M + +SK+ GESER L +F A
Sbjct: 277 LFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADC-LSKWVGESERQLRLLFDQAY- 334
Query: 386 LPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLD 445
L +IIF DE+D A R S + I+S LL +DG + ++VVI ATNR +D
Sbjct: 335 LMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSID 394
Query: 446 PALI--SRFDSMITFGLPD 462
PAL RFD F LPD
Sbjct: 395 PALRRPGRFDREFLFNLPD 413
>ASPGD|ASPL0000034586 [details] [associations]
symbol:AN3061 species:162425 "Emericella nidulans"
[GO:0005768 "endosome" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0045053 "protein retention in
Golgi apparatus" evidence=IEA] [GO:0070676 "intralumenal vesicle
formation" evidence=IEA] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0016125 "sterol
metabolic process" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001306 EMBL:AACD01000051 Pfam:PF04212 eggNOG:COG0464
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 SMART:SM00745
HOGENOM:HOG000225146 KO:K12196 OMA:FTGKRIP OrthoDB:EOG4V1B8K
RefSeq:XP_660665.1 ProteinModelPortal:Q5B8R9 SMR:Q5B8R9
STRING:Q5B8R9 EnsemblFungi:CADANIAT00010018 GeneID:2874497
KEGG:ani:AN3061.2 Uniprot:Q5B8R9
Length = 434
Score = 274 (101.5 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 68/199 (34%), Positives = 110/199 (55%)
Query: 272 TSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPP 331
+ K + WE++AG + K +++ ++L ++ P ++ G R + + +L GPP
Sbjct: 124 SEKPNVKWEDVAGLEGAKEALKEAVILPIKFPHLFT----GRRQPW-----KGILLYGPP 174
Query: 332 GTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAI 391
GTGK+ A+ +A +A + V ++SK+ GESERL+ ++F++A E AI
Sbjct: 175 GTGKSYLAKAVATEANST------FFSVSSSDLVSKWMGESERLVKQLFNMARE-NKPAI 227
Query: 392 IFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKK-VVVIAATNRKQDLDPALIS 450
IF+DEVD+ AR EA+RRI + LL Q+DG D K V+++ ATN LD A+
Sbjct: 228 IFIDEVDALCGARGENDSEASRRIKTELLVQMDGVGNDSKGVLILGATNIPWQLDAAIRR 287
Query: 451 RFDSMITFGLPDHENRQEI 469
RF + LPD R ++
Sbjct: 288 RFQRRVHISLPDINARMKM 306
>TAIR|locus:2038678 [details] [associations]
symbol:SKD1 "SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005771 "multivesicular body"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IMP]
[GO:0016192 "vesicle-mediated transport" evidence=RCA;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007033 "vacuole
organization" evidence=IMP] [GO:0010091 "trichome branching"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0006623
"protein targeting to vacuole" evidence=RCA] [GO:0006635 "fatty
acid beta-oxidation" evidence=RCA] [GO:0006869 "lipid transport"
evidence=RCA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0010351 "lithium ion transport" evidence=RCA] [GO:0016197
"endosomal transport" evidence=RCA] [GO:0016558 "protein import
into peroxisome matrix" evidence=RCA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0009506
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GO:GO:0016192
Pfam:PF04212 HSSP:Q01853 GO:GO:0017111 EMBL:AC006232 GO:GO:0007032
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005771 GO:GO:0007033
EMBL:AC005824 GO:GO:0010091 SMART:SM00745 HOGENOM:HOG000225146
UniGene:At.13265 KO:K12196 OMA:FTGKRIP EMBL:AF367297 EMBL:AY091684
IPI:IPI00544233 PIR:F84674 RefSeq:NP_180328.1 SMR:Q9ZNT0
IntAct:Q9ZNT0 STRING:Q9ZNT0 EnsemblPlants:AT2G27600.1 GeneID:817306
KEGG:ath:AT2G27600 TAIR:At2g27600 InParanoid:Q9ZNT0
ProtClustDB:CLSN2683515 Genevestigator:Q9ZNT0 Uniprot:Q9ZNT0
Length = 435
Score = 274 (101.5 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 72/199 (36%), Positives = 111/199 (55%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAVLFEGPPG 332
K I W ++AG + K+ +++ ++L ++ P+ + G R RP RA L GPPG
Sbjct: 126 KPNIKWSDVAGLESAKQALQEAVILPVKFPQFFT----GKR------RPWRAFLLYGPPG 175
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGK+ A+ +A +A + V ++SK+ GESE+L+ +F +A E +II
Sbjct: 176 TGKSYLAKAVATEADST------FFSVSSSDLVSKWMGESEKLVSNLFEMARESAP-SII 228
Query: 393 FLDEVDSFAVAR-DSEMHEATRRILSVLLRQIDGF-EQDKKVVVIAATNRKQDLDPALIS 450
F+DE+DS R + EA+RRI + LL Q+ G D+KV+V+AATN LD A+
Sbjct: 229 FVDEIDSLCGTRGEGNESEASRRIKTELLVQMQGVGHNDEKVLVLAATNTPYALDQAIRR 288
Query: 451 RFDSMITFGLPDHENRQEI 469
RFD I LP+ + RQ +
Sbjct: 289 RFDKRIYIPLPEAKARQHM 307
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 271 (100.5 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 84/256 (32%), Positives = 133/256 (51%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++E + G D+Q +EI++ I L ++ PE++D A G +P+ VL GPPGTGKT
Sbjct: 141 TYEMVGGLDKQIQEIKEVIELPVKHPELFD--ALGI------TQPKGVLLYGPPGTGKTL 192
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ K+ GE R++ ++F +A E P+ IIF+DE
Sbjct: 193 LARAVAHHTECT------FIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS--IIFMDE 244
Query: 397 VDSFAVAR-DSEMHEA-TRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRF 452
+DS AR ++ ++ +R + LL Q+DGFE K + VI ATNR LD AL+ R
Sbjct: 245 IDSIGSARLETGTGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRI 304
Query: 453 DSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSWA 509
D I F P+ E R +I +++ M SG +++ VC +A +A
Sbjct: 305 DRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGM-YA 363
Query: 510 SKIIRGQITK-DGEQA 524
+ R +T+ D E A
Sbjct: 364 LRERRVHVTQEDFEMA 379
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 284 (105.0 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 79/253 (31%), Positives = 133/253 (52%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S+ +++++ I G + Q + I + I L L+ PE++ + PR +L GPPG
Sbjct: 346 SQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKS--------YGIPAPRGLLLYGPPG 397
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ GA V ++ P E++ SK+YGE+E L ++F+ A L + +II
Sbjct: 398 TGKTMIARAVANEVGAY----VSVINGP-EII-SKFYGETEARLRQIFAEAT-LRHPSII 450
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALI 449
F+DE+D+ R+ E +R+++ LL +DG + +V+V+ ATNR Q LD AL
Sbjct: 451 FIDELDALCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALR 510
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAK---HXXXXXXXXXXXXXXX-MSGRDIRDVCQQ 503
RFD I G+P+ ++R +I + + H G D++ +C +
Sbjct: 511 RPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNE 570
Query: 504 AERSWASKIIRGQ 516
A +++R Q
Sbjct: 571 AGLYALRRVLRKQ 583
Score = 225 (84.3 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 59/171 (34%), Positives = 93/171 (54%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+SW +I G + K +++ + L+ P+ + +R + P+ VL GPPG KT
Sbjct: 624 VSWSDIGGLENIKLKLKQAVEWPLKHPKSF------SRMGIQP--PKGVLLYGPPGCSKT 675
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ +AN++G + + + +M+KY GESER + +VF A + +IIF DE
Sbjct: 676 MIAKALANESG------LNFLAIKGPELMNKYVGESERAVREVFRKARAVAP-SIIFFDE 728
Query: 397 VDSFAVARDSEMH--EATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLD 445
+D+ AV R S R+L+ LL ++DG EQ K V V+AATNR +D
Sbjct: 729 LDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRID 779
Score = 43 (20.2 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 135 VAVKGQKVTIKFQVPPACEIPQLIANLVSHLGL 167
VA G V F ++P+ N + HLGL
Sbjct: 39 VAAPGMLVVTNFLEKVDGKVPKTFQNSLVHLGL 71
>ZFIN|ZDB-GENE-040426-2331 [details] [associations]
symbol:spast "spastin" species:7955 "Danio rerio"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA;ISS] [GO:0048675 "axon extension"
evidence=IGI;IMP] [GO:0031122 "cytoplasmic microtubule
organization" evidence=IMP] [GO:0015630 "microtubule cytoskeleton"
evidence=ISS] [GO:0048487 "beta-tubulin binding" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0051013 "microtubule severing"
evidence=ISS] [GO:0051260 "protein homooligomerization"
evidence=ISS] [GO:0001578 "microtubule bundle formation"
evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IMP]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0021955 "central nervous system neuron
axonogenesis" evidence=IMP] [GO:0007416 "synapse assembly"
evidence=IMP] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2331 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0043066 GO:GO:0051301 GO:GO:0051260
GO:GO:0005815 GO:GO:0007049 Pfam:PF04212 GO:GO:0045773 HSSP:Q01853
eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 GO:GO:0005874 GO:GO:0031122
GO:GO:0021955 GO:GO:0043014 GO:GO:0048676 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 GO:GO:0031117
KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 OMA:HKSTPKT
OrthoDB:EOG4NZTTF EMBL:AY304504 EMBL:CU651563 EMBL:BC067715
IPI:IPI00497843 RefSeq:NP_998080.1 UniGene:Dr.30307
ProteinModelPortal:Q6NW58 SMR:Q6NW58 STRING:Q6NW58
Ensembl:ENSDART00000035150 GeneID:405851 KEGG:dre:405851
NextBio:20817813 Bgee:Q6NW58 Uniprot:Q6NW58
Length = 570
Score = 278 (102.9 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 70/207 (33%), Positives = 113/207 (54%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S S + +++IAG D K+ +++ ++L PE++ G R R +L GPPG
Sbjct: 288 SGSVVRFDDIAGQDLAKQALQEIVILPALRPELFT----GLRAP-----ARGLLLFGPPG 338
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
GKT A+ +A ++ A + + SKY GE E+L+ +F++A EL +II
Sbjct: 339 NGKTMLAKAVAMESNAT------FFNISAATLTSKYVGEGEKLVRALFAVAREL-QPSII 391
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQ--DKKVVVIAATNRKQDLDPALIS 450
F+DE+DS R H+A+RR+ + L + DG + D++V+V+ ATNR Q+LD A++
Sbjct: 392 FIDEIDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDERVLVMGATNRPQELDEAVLR 451
Query: 451 RFDSMITFGLPDHENRQEIAAQY-AKH 476
RF I LP E R ++ +KH
Sbjct: 452 RFAKRIYVALPTEETRLKLLKNLLSKH 478
>WB|WBGene00008682 [details] [associations]
symbol:lex-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0007126 "meiosis" evidence=IMP]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0009792 GO:GO:0008406 GO:GO:0006351
eggNOG:COG0464 GO:GO:0017111 GO:GO:0045132 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:Z68297
EMBL:Z68316 EMBL:DQ140399 PIR:T20739 RefSeq:NP_001122768.1
RefSeq:NP_001122769.1 RefSeq:NP_502289.2 UniGene:Cel.6917
ProteinModelPortal:P54816 SMR:P54816 STRING:P54816 PaxDb:P54816
EnsemblMetazoa:F11A10.1a.1 EnsemblMetazoa:F11A10.1a.2 GeneID:178146
KEGG:cel:CELE_F11A10.1 UCSC:F11A10.1a CTD:178146 WormBase:F11A10.1a
WormBase:F11A10.1b WormBase:F11A10.1c GeneTree:ENSGT00550000074694
HOGENOM:HOG000154515 InParanoid:P54816 OMA:QDETENG NextBio:899910
GO:GO:0031445 Uniprot:P54816
Length = 1291
Score = 284 (105.0 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 78/233 (33%), Positives = 119/233 (51%)
Query: 242 SLTSEELDALVSVLQLAGRRI---YGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILL 298
++T +EL + +L R+ G + + S + ++ + G + +++ +L
Sbjct: 350 NMTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSSVGFDQVGGLGHHIQSLKEVVLF 409
Query: 299 SLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMY 358
+ PEV++ KF N P+ V+F GPPGTGKT AR +AN+ + M
Sbjct: 410 PMLYPEVFE--------KFRINPPKGVVFYGPPGTGKTLVARALANECRRGANKVAFFMR 461
Query: 359 VPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSV 418
+ +SK+ GESER L +F A + +IIF DE+D A R S+ + I+S
Sbjct: 462 KGADC-LSKWVGESERQLRLLFDQAYAM-RPSIIFFDEIDGLAPVRSSKQDQIHASIVST 519
Query: 419 LLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 469
LL +DG + +VVVI ATNR LDPAL RFD + F LPD R++I
Sbjct: 520 LLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQI 572
>UNIPROTKB|P54816 [details] [associations]
symbol:lex-1 "Tat-binding homolog 7" species:6239
"Caenorhabditis elegans" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0031445 "regulation of heterochromatin assembly" evidence=IMP]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0009792 GO:GO:0008406 GO:GO:0006351
eggNOG:COG0464 GO:GO:0017111 GO:GO:0045132 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:Z68297
EMBL:Z68316 EMBL:DQ140399 PIR:T20739 RefSeq:NP_001122768.1
RefSeq:NP_001122769.1 RefSeq:NP_502289.2 UniGene:Cel.6917
ProteinModelPortal:P54816 SMR:P54816 STRING:P54816 PaxDb:P54816
EnsemblMetazoa:F11A10.1a.1 EnsemblMetazoa:F11A10.1a.2 GeneID:178146
KEGG:cel:CELE_F11A10.1 UCSC:F11A10.1a CTD:178146 WormBase:F11A10.1a
WormBase:F11A10.1b WormBase:F11A10.1c GeneTree:ENSGT00550000074694
HOGENOM:HOG000154515 InParanoid:P54816 OMA:QDETENG NextBio:899910
GO:GO:0031445 Uniprot:P54816
Length = 1291
Score = 284 (105.0 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 78/233 (33%), Positives = 119/233 (51%)
Query: 242 SLTSEELDALVSVLQLAGRRI---YGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILL 298
++T +EL + +L R+ G + + S + ++ + G + +++ +L
Sbjct: 350 NMTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSSVGFDQVGGLGHHIQSLKEVVLF 409
Query: 299 SLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMY 358
+ PEV++ KF N P+ V+F GPPGTGKT AR +AN+ + M
Sbjct: 410 PMLYPEVFE--------KFRINPPKGVVFYGPPGTGKTLVARALANECRRGANKVAFFMR 461
Query: 359 VPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSV 418
+ +SK+ GESER L +F A + +IIF DE+D A R S+ + I+S
Sbjct: 462 KGADC-LSKWVGESERQLRLLFDQAYAM-RPSIIFFDEIDGLAPVRSSKQDQIHASIVST 519
Query: 419 LLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 469
LL +DG + +VVVI ATNR LDPAL RFD + F LPD R++I
Sbjct: 520 LLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQI 572
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 273 (101.2 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 78/266 (29%), Positives = 129/266 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
+ + +E+I G ++Q +EI + + L L+ PE+++ + E P+ +L GPPGT
Sbjct: 164 RPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVG------IEP--PKGILLYGPPGT 215
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT A+ +A + A + V E+V K+ GE L+ +F LA E +IIF
Sbjct: 216 GKTLLAKAVATETNA-----TFIRVVGSELV-KKFIGEGASLVKDIFKLAKEKAP-SIIF 268
Query: 394 LDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI- 449
+DE+D+ A R + R R L LL ++DGF+ V +I ATNR LDPA++
Sbjct: 269 IDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILR 328
Query: 450 -SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXMSG---RDIRDVCQQAE 505
RFD +I PD + R EI + + G +++ +C +A
Sbjct: 329 PGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAG 388
Query: 506 RSWASKIIRGQITKDGEQACLPPLQE 531
+ A + +R +T D + + + E
Sbjct: 389 MN-AIRELRDYVTMDDFRKAVEKIME 413
>DICTYBASE|DDB_G0287165 [details] [associations]
symbol:DDB_G0287165 "spastin-like protein"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0287165 GO:GO:0016021 GO:GO:0005524 GO:GO:0005737
Pfam:PF04212 eggNOG:COG0464 HSSP:O75351 GO:GO:0008568 GO:GO:0005874
EMBL:AAFI02000098 KO:K13254 HAMAP:MF_03021 RefSeq:XP_637373.1
ProteinModelPortal:Q54KQ7 SMR:Q54KQ7 EnsemblProtists:DDB0231319
GeneID:8625995 KEGG:ddi:DDB_G0287165 InParanoid:Q54KQ7 OMA:TERSSNE
ProtClustDB:CLSZ2729356 Uniprot:Q54KQ7
Length = 655
Score = 279 (103.3 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 66/198 (33%), Positives = 109/198 (55%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K+ + W+++ G D+ K+ + ++++L P + D+ G R P+ +L GPPG
Sbjct: 378 KNPVKWDDVVGLDKVKQSLMESVIL----PNLRPDVFTGLRAP-----PKGLLLFGPPGN 428
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT A+ +A ++ V + + SKY G+ E+L+ +F++A +IIF
Sbjct: 429 GKTMIAKAVAYESK------VTFFSISSSSLTSKYVGDGEKLVRALFAVATHF-QPSIIF 481
Query: 394 LDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQ--DKKVVVIAATNRKQDLDPALISR 451
+DE+DS R S EA+RR+ + +L Q DG D++V+V+ ATNR +DLD A + R
Sbjct: 482 IDEIDSLLTERSSNESEASRRLKTEILVQFDGARTNGDERVLVMGATNRPEDLDDAALRR 541
Query: 452 FDSMITFGLPDHENRQEI 469
I GLP+ E R +I
Sbjct: 542 LVKRIYVGLPELETRLQI 559
>POMBASE|SPAC31G5.19 [details] [associations]
symbol:abo1 "ATPase with bromodomain protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=ISM] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISM] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISM] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC31G5.19 GO:GO:0005524 EMBL:CU329670
GO:GO:0006357 GO:GO:0016887 GO:GO:0006338 GO:GO:0000790 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000157282 OrthoDB:EOG473T0K PIR:T38636
RefSeq:NP_594020.1 ProteinModelPortal:O14114 STRING:O14114
EnsemblFungi:SPAC31G5.19.1 GeneID:2543084 KEGG:spo:SPAC31G5.19
OMA:ITRIMAN NextBio:20804112 Uniprot:O14114
Length = 1190
Score = 283 (104.7 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 72/197 (36%), Positives = 105/197 (53%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
S +S+E++ G D ++++ ++L L PE++ +F PR VLF GPPGTG
Sbjct: 261 SSLSFESVGGLDNYINQLKEMVMLPLLYPEIFQ--------RFNMQPPRGVLFHGPPGTG 312
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +A A + + V +SK+ GE+ER L +F A +IIF
Sbjct: 313 KTLMARALA-AACSSENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKST-QPSIIFF 370
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRF 452
DE+D A R S+ + I+S LL +DG E +V++I ATNR +DPAL RF
Sbjct: 371 DEIDGLAPVRSSKQEQIHASIVSTLLALMDGMESRGQVIIIGATNRPDAVDPALRRPGRF 430
Query: 453 DSMITFGLPDHENRQEI 469
D F LPD + R++I
Sbjct: 431 DREFYFPLPDRDARKKI 447
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 272 (100.8 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 84/257 (32%), Positives = 124/257 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K +I++ +I G +Q ++ + + + L PE + + G + P+ VL GPPGT
Sbjct: 156 KPDITYNDIGGCKEQLEKLREVVEMPLLQPERF--VTLGI------DPPKGVLLYGPPGT 207
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT AR IAN+ A + + E+V KY GE R++ ++F +A I+F
Sbjct: 208 GKTLTARAIANRTDACF-----ICVIGSELVQ-KYVGEGARMVRELFQMAKS-KKACILF 260
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
+DEVD+ +R E HE R +L ++ Q+DGF+ + V+ ATNR LD AL+
Sbjct: 261 IDEVDAIGGSRGDESAHGDHEVQRTMLEIV-NQLDGFDNRGNIKVLMATNRPDTLDSALV 319
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F LPD E R I +A +G DIR VC +A
Sbjct: 320 RPGRIDRRIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEA 379
Query: 505 ERSWASKIIRGQIT-KD 520
+A + R IT KD
Sbjct: 380 GM-FAIRARRKTITEKD 395
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 272 (100.8 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 84/257 (32%), Positives = 124/257 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K +I++ +I G +Q ++ + + + L PE + + G + P+ VL GPPGT
Sbjct: 156 KPDITYNDIGGCKEQLEKLREVVEMPLLQPERF--VTLGI------DPPKGVLLYGPPGT 207
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT AR IAN+ A + + E+V KY GE R++ ++F +A I+F
Sbjct: 208 GKTLTARAIANRTDACF-----ICVIGSELVQ-KYVGEGARMVRELFQMAKS-KKACILF 260
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
+DEVD+ +R E HE R +L ++ Q+DGF+ + V+ ATNR LD AL+
Sbjct: 261 IDEVDAIGGSRGDESAHGDHEVQRTMLEIV-NQLDGFDNRGNIKVLMATNRPDTLDSALV 319
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F LPD E R I +A +G DIR VC +A
Sbjct: 320 RPGRIDRRIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEA 379
Query: 505 ERSWASKIIRGQIT-KD 520
+A + R IT KD
Sbjct: 380 GM-FAIRARRKTITEKD 395
>RGD|1303062 [details] [associations]
symbol:Katna1 "katanin p60 (ATPase-containing) subunit A1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=ISO;ISS] [GO:0001578 "microtubule bundle formation"
evidence=IEA;ISO] [GO:0001764 "neuron migration" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0005634 "nucleus"
evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0005811 "lipid particle" evidence=IEA;ISO] [GO:0005813
"centrosome" evidence=IEA;ISO] [GO:0005819 "spindle"
evidence=ISO;ISS] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0007067 "mitosis"
evidence=TAS] [GO:0008017 "microtubule binding" evidence=IEA;ISO]
[GO:0008104 "protein localization" evidence=ISO;TAS] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISO;TAS] [GO:0030424 "axon"
evidence=ISO;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO;ISS] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA;ISO] [GO:0043025 "neuronal
cell body" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA;ISO] [GO:0051013 "microtubule severing"
evidence=ISO;IDA] [GO:0051301 "cell division" evidence=IEA]
[GO:0051329 "interphase of mitotic cell cycle" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:1303062
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005813
GO:GO:0001764 GO:GO:0008104 GO:GO:0051301 GO:GO:0007067
GO:GO:0005811 GO:GO:0030424 GO:GO:0043025 GO:GO:0016887
GO:GO:0030426 eggNOG:COG0464 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0010977
KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
GeneTree:ENSGT00550000074466 BRENDA:3.6.4.3 CTD:11104 OMA:SQYSDPK
OrthoDB:EOG4CJVGZ GO:GO:0051329 EMBL:AY621629 EMBL:BC097929
IPI:IPI00363811 RefSeq:NP_001004217.2 UniGene:Rn.47464
ProteinModelPortal:Q6E0V2 STRING:Q6E0V2 PRIDE:Q6E0V2
Ensembl:ENSRNOT00000020417 GeneID:292464 KEGG:rno:292464
UCSC:RGD:1303062 InParanoid:Q6E0V2 NextBio:634169
Genevestigator:Q6E0V2 GermOnline:ENSRNOG00000014996 Uniprot:Q6E0V2
Length = 491
Score = 275 (101.9 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 91/299 (30%), Positives = 139/299 (46%)
Query: 267 EPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAV 325
E + + + W +IA + K+ +++ ++L + PE + +G R RP + V
Sbjct: 196 ERDIISQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFF----KGIR------RPWKGV 245
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
L GPPGTGKT A+ +A + V + SKY GESE+L+ +F +A
Sbjct: 246 LMVGPPGTGKTLLAKAVATECKTT------FFNVSSSTLTSKYRGESEKLVRLLFEMAR- 298
Query: 386 LPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDGF----EQD---KKVVVIAA 437
+ A IF+DE+DS R SE HEA+RR+ + LL Q+DG E D K V+V+AA
Sbjct: 299 FYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAA 358
Query: 438 TNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SG 494
TN D+D AL R + I LP + R+E+ + M SG
Sbjct: 359 TNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSG 418
Query: 495 RDIRDVCQQAERSWASKIIRGQITKD-----GEQACLPPLQEYIESATNRRRSLLDAAE 548
DI +VC+ A + I G ++ E+ +P E E A + + AA+
Sbjct: 419 ADITNVCRDASLMAMRRRIEGLTPEEIRNLSREEMHMPTTMEDFEMALKKVSKSVSAAD 477
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 268 (99.4 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 85/264 (32%), Positives = 133/264 (50%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++E I G D+Q +EI++ I L ++ PE+++ A G +P+ VL GPPGTGKT
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFE--ALGIA------QPKGVLLYGPPGTGKTL 198
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ K+ GE R++ ++F +A E P+ IIF+DE
Sbjct: 199 LARAVAHHTDCT------FIRVSGSELVQKFIGEGARMVRELFVMAREHAPS--IIFMDE 250
Query: 397 VDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS +R S +R + LL Q+DGFE K + VI ATNR LD AL+ R
Sbjct: 251 IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGR 310
Query: 452 FDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSW 508
D I F P+ E R +I +++ M SG +++ VC +A +
Sbjct: 311 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM-Y 369
Query: 509 ASKIIRGQITK-DGEQACLPPLQE 531
A + R +T+ D E A +Q+
Sbjct: 370 ALRERRVHVTQEDFEMAVAKVMQK 393
Score = 39 (18.8 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 167 LKVEEHGGGSDMGLRAWDSAVAWQLTLKPPEKQNESGGDRAQSGDMNAR 215
+++EE GS GLR + + +L L +K +AQ ++NA+
Sbjct: 9 MELEEGKAGS--GLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAK 55
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 268 (99.4 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 85/264 (32%), Positives = 133/264 (50%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++E I G D+Q +EI++ I L ++ PE+++ A G +P+ VL GPPGTGKT
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFE--ALGIA------QPKGVLLYGPPGTGKTL 198
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ K+ GE R++ ++F +A E P+ IIF+DE
Sbjct: 199 LARAVAHHTDCT------FIRVSGSELVQKFIGEGARMVRELFVMAREHAPS--IIFMDE 250
Query: 397 VDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS +R S +R + LL Q+DGFE K + VI ATNR LD AL+ R
Sbjct: 251 IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGR 310
Query: 452 FDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSW 508
D I F P+ E R +I +++ M SG +++ VC +A +
Sbjct: 311 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM-Y 369
Query: 509 ASKIIRGQITK-DGEQACLPPLQE 531
A + R +T+ D E A +Q+
Sbjct: 370 ALRERRVHVTQEDFEMAVAKVMQK 393
Score = 39 (18.8 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 167 LKVEEHGGGSDMGLRAWDSAVAWQLTLKPPEKQNESGGDRAQSGDMNAR 215
+++EE GS GLR + + +L L +K +AQ ++NA+
Sbjct: 9 MELEEGKAGS--GLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAK 55
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 268 (99.4 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 85/264 (32%), Positives = 133/264 (50%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++E I G D+Q +EI++ I L ++ PE+++ A G +P+ VL GPPGTGKT
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFE--ALGIA------QPKGVLLYGPPGTGKTL 198
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ K+ GE R++ ++F +A E P+ IIF+DE
Sbjct: 199 LARAVAHHTDCT------FIRVSGSELVQKFIGEGARMVRELFVMAREHAPS--IIFMDE 250
Query: 397 VDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS +R S +R + LL Q+DGFE K + VI ATNR LD AL+ R
Sbjct: 251 IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGR 310
Query: 452 FDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSW 508
D I F P+ E R +I +++ M SG +++ VC +A +
Sbjct: 311 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM-Y 369
Query: 509 ASKIIRGQITK-DGEQACLPPLQE 531
A + R +T+ D E A +Q+
Sbjct: 370 ALRERRVHVTQEDFEMAVAKVMQK 393
Score = 39 (18.8 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 167 LKVEEHGGGSDMGLRAWDSAVAWQLTLKPPEKQNESGGDRAQSGDMNAR 215
+++EE GS GLR + + +L L +K +AQ ++NA+
Sbjct: 9 MELEEGKAGS--GLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAK 55
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 268 (99.4 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 85/264 (32%), Positives = 133/264 (50%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++E I G D+Q +EI++ I L ++ PE+++ A G +P+ VL GPPGTGKT
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFE--ALGIA------QPKGVLLYGPPGTGKTL 198
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ K+ GE R++ ++F +A E P+ IIF+DE
Sbjct: 199 LARAVAHHTDCT------FIRVSGSELVQKFIGEGARMVRELFVMAREHAPS--IIFMDE 250
Query: 397 VDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS +R S +R + LL Q+DGFE K + VI ATNR LD AL+ R
Sbjct: 251 IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGR 310
Query: 452 FDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSW 508
D I F P+ E R +I +++ M SG +++ VC +A +
Sbjct: 311 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM-Y 369
Query: 509 ASKIIRGQITK-DGEQACLPPLQE 531
A + R +T+ D E A +Q+
Sbjct: 370 ALRERRVHVTQEDFEMAVAKVMQK 393
Score = 39 (18.8 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 167 LKVEEHGGGSDMGLRAWDSAVAWQLTLKPPEKQNESGGDRAQSGDMNAR 215
+++EE GS GLR + + +L L +K +AQ ++NA+
Sbjct: 9 MELEEGKAGS--GLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAK 55
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 268 (99.4 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 85/264 (32%), Positives = 133/264 (50%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++E I G D+Q +EI++ I L ++ PE+++ A G +P+ VL GPPGTGKT
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFE--ALGIA------QPKGVLLYGPPGTGKTL 198
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ K+ GE R++ ++F +A E P+ IIF+DE
Sbjct: 199 LARAVAHHTDCT------FIRVSGSELVQKFIGEGARMVRELFVMAREHAPS--IIFMDE 250
Query: 397 VDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS +R S +R + LL Q+DGFE K + VI ATNR LD AL+ R
Sbjct: 251 IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGR 310
Query: 452 FDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSW 508
D I F P+ E R +I +++ M SG +++ VC +A +
Sbjct: 311 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM-Y 369
Query: 509 ASKIIRGQITK-DGEQACLPPLQE 531
A + R +T+ D E A +Q+
Sbjct: 370 ALRERRVHVTQEDFEMAVAKVMQK 393
Score = 39 (18.8 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 167 LKVEEHGGGSDMGLRAWDSAVAWQLTLKPPEKQNESGGDRAQSGDMNAR 215
+++EE GS GLR + + +L L +K +AQ ++NA+
Sbjct: 9 MELEEGKAGS--GLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAK 55
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 270 (100.1 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 77/237 (32%), Positives = 120/237 (50%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++E + G ++Q +EI++ I L ++ PE+++ + +P+ +L GPPGTGKT
Sbjct: 143 TYEMVGGLEKQIKEIKEVIELPVKHPELFESLG--------IPQPKGILLYGPPGTGKTL 194
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ KY GE R++ ++F +A E P+ IIF+DE
Sbjct: 195 LARAVAHHTDCK------FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS--IIFMDE 246
Query: 397 VDSFAVAR-DSEMHEA---TRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--S 450
+DS +R DS +R + LL Q+DGFE K + VI ATNR LDPAL+
Sbjct: 247 IDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPG 306
Query: 451 RFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F P E R EI +++ M SG +++ VC +A
Sbjct: 307 RIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEA 363
>FB|FBgn0039141 [details] [associations]
symbol:spas "spastin" species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS;IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0031117 "positive regulation of
microtubule depolymerization" evidence=IDA;IMP] [GO:0043195
"terminal bouton" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IMP]
[GO:0048167 "regulation of synaptic plasticity" evidence=TAS]
[GO:0019226 "transmission of nerve impulse" evidence=TAS]
[GO:0051013 "microtubule severing" evidence=IDA;IMP] [GO:0000070
"mitotic sister chromatid segregation" evidence=IMP] [GO:0008568
"microtubule-severing ATPase activity" evidence=IMP] [GO:0005813
"centrosome" evidence=IDA] [GO:0005694 "chromosome" evidence=IDA]
[GO:0036078 "minus-end specific microtubule depolymerization"
evidence=IMP] [GO:0000091 "mitotic anaphase A" evidence=IMP]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0035099
"hemocyte migration" evidence=IMP] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:AE014297
GO:GO:0016021 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0005694 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0043195 GO:GO:0007626 GO:GO:0000070 Pfam:PF04212
eggNOG:COG0464 GO:GO:0008017 GO:GO:0008568 GO:GO:0051013
GO:GO:0005874 GO:GO:0043014 SMART:SM00745 GO:GO:0035099
GeneTree:ENSGT00570000078874 GO:GO:0036078 GO:GO:0000091
GO:GO:0031117 KO:K13254 OrthoDB:EOG44XGXW HAMAP:MF_03021
OMA:FLNISAA EMBL:AY069522 EMBL:BT001254 EMBL:BT001351 EMBL:BT044258
RefSeq:NP_651206.3 RefSeq:NP_732941.2 UniGene:Dm.7035 PDB:3B9P
PDBsum:3B9P ProteinModelPortal:Q8I0P1 SMR:Q8I0P1 DIP:DIP-59834N
MINT:MINT-825923 STRING:Q8I0P1 PaxDb:Q8I0P1
EnsemblMetazoa:FBtr0084533 EnsemblMetazoa:FBtr0084534 GeneID:42846
KEGG:dme:Dmel_CG5977 CTD:42846 FlyBase:FBgn0039141
InParanoid:Q8T066 PhylomeDB:Q8I0P1 EvolutionaryTrace:Q8I0P1
GenomeRNAi:42846 NextBio:830886 Bgee:Q8I0P1 Uniprot:Q8I0P1
Length = 758
Score = 279 (103.3 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 66/196 (33%), Positives = 107/196 (54%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+++ W +IAG D K+ +++ ++L PE++ G R + +L GPPG G
Sbjct: 478 AKVEWTDIAGQDVAKQALQEMVILPSVRPELFT----GLRAP-----AKGLLLFGPPGNG 528
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +A + A + + + SKY G+ E+L+ +F++A + +IIF+
Sbjct: 529 KTLLARAVATECSAT------FLNISAASLTSKYVGDGEKLVRALFAVARHM-QPSIIFI 581
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALISR 451
DEVDS R S HEA+RR+ + L + DG + ++VV+AATNR Q+LD A + R
Sbjct: 582 DEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRR 641
Query: 452 FDSMITFGLPDHENRQ 467
F + LPD + R+
Sbjct: 642 FTKRVYVSLPDEQTRE 657
>UNIPROTKB|B3P8A3 [details] [associations]
symbol:spas "Spastin" species:7220 "Drosophila erecta"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 GO:GO:0008017 GO:GO:0008568 GO:GO:0051013
GO:GO:0005874 SMART:SM00745 EMBL:CH954182 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 RefSeq:XP_001982057.1
EnsemblMetazoa:FBtr0131301 GeneID:6555002 KEGG:der:Dere_GG11247
FlyBase:FBgn0103548 Uniprot:B3P8A3
Length = 758
Score = 279 (103.3 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 66/196 (33%), Positives = 107/196 (54%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+++ W +IAG D K+ +++ ++L PE++ G R + +L GPPG G
Sbjct: 478 AKVEWTDIAGQDVAKQALQEMVILPSVRPELFT----GLRAP-----AKGLLLFGPPGNG 528
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +A + A + + + SKY G+ E+L+ +F++A + +IIF+
Sbjct: 529 KTLLARAVATECSAT------FLNISAASLTSKYVGDGEKLVRALFAVARHM-QPSIIFI 581
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALISR 451
DEVDS R S HEA+RR+ + L + DG + ++VV+AATNR Q+LD A + R
Sbjct: 582 DEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRR 641
Query: 452 FDSMITFGLPDHENRQ 467
F + LPD + R+
Sbjct: 642 FTKRVYVSLPDEQTRE 657
>UNIPROTKB|B4HGG6 [details] [associations]
symbol:spas "Spastin" species:7238 "Drosophila sechellia"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 GO:GO:0008017 GO:GO:0008568 GO:GO:0051013
GO:GO:0005874 SMART:SM00745 EMBL:CH480815 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 RefSeq:XP_002032433.1
EnsemblMetazoa:FBtr0209536 GeneID:6607668 KEGG:dse:Dsec_GM26551
FlyBase:FBgn0181404 Uniprot:B4HGG6
Length = 758
Score = 279 (103.3 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 66/196 (33%), Positives = 107/196 (54%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+++ W +IAG D K+ +++ ++L PE++ G R + +L GPPG G
Sbjct: 478 AKVEWTDIAGQDVAKQALQEMVILPSVRPELFT----GLRAP-----AKGLLLFGPPGNG 528
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +A + A + + + SKY G+ E+L+ +F++A + +IIF+
Sbjct: 529 KTLLARAVATECSAT------FLNISAASLTSKYVGDGEKLVRALFAVARHM-QPSIIFI 581
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALISR 451
DEVDS R S HEA+RR+ + L + DG + ++VV+AATNR Q+LD A + R
Sbjct: 582 DEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRR 641
Query: 452 FDSMITFGLPDHENRQ 467
F + LPD + R+
Sbjct: 642 FTKRVYVSLPDEQTRE 657
>UNIPROTKB|B4PL32 [details] [associations]
symbol:spas "Spastin" species:7245 "Drosophila yakuba"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 eggNOG:COG0464 GO:GO:0008017 GO:GO:0008568
GO:GO:0051013 GO:GO:0005874 EMBL:CM000160 SMART:SM00745 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 RefSeq:XP_002099305.1
EnsemblMetazoa:FBtr0269957 GeneID:6538792 KEGG:dya:Dyak_GE23439
FlyBase:FBgn0240623 Uniprot:B4PL32
Length = 758
Score = 279 (103.3 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 66/196 (33%), Positives = 107/196 (54%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+++ W +IAG D K+ +++ ++L PE++ G R + +L GPPG G
Sbjct: 478 AKVEWTDIAGQDVAKQALQEMVILPSVRPELFT----GLRAP-----AKGLLLFGPPGNG 528
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +A + A + + + SKY G+ E+L+ +F++A + +IIF+
Sbjct: 529 KTLLARAVATECSAT------FLNISAASLTSKYVGDGEKLVRALFAVARHM-QPSIIFI 581
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALISR 451
DEVDS R S HEA+RR+ + L + DG + ++VV+AATNR Q+LD A + R
Sbjct: 582 DEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRR 641
Query: 452 FDSMITFGLPDHENRQ 467
F + LPD + R+
Sbjct: 642 FTKRVYVSLPDEQTRE 657
>UNIPROTKB|B4QSF0 [details] [associations]
symbol:spas "Spastin" species:7240 "Drosophila simulans"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 GO:GO:0008017 GO:GO:0008568 GO:GO:0051013
GO:GO:0005874 EMBL:CM000364 SMART:SM00745 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 RefSeq:XP_002104646.1
EnsemblMetazoa:FBtr0220966 GeneID:6729329 KEGG:dsi:Dsim_GD21056
FlyBase:FBgn0192511 Uniprot:B4QSF0
Length = 758
Score = 279 (103.3 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 66/196 (33%), Positives = 107/196 (54%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+++ W +IAG D K+ +++ ++L PE++ G R + +L GPPG G
Sbjct: 478 AKVEWTDIAGQDVAKQALQEMVILPSVRPELFT----GLRAP-----AKGLLLFGPPGNG 528
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +A + A + + + SKY G+ E+L+ +F++A + +IIF+
Sbjct: 529 KTLLARAVATECSAT------FLNISAASLTSKYVGDGEKLVRALFAVARHM-QPSIIFI 581
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALISR 451
DEVDS R S HEA+RR+ + L + DG + ++VV+AATNR Q+LD A + R
Sbjct: 582 DEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRR 641
Query: 452 FDSMITFGLPDHENRQ 467
F + LPD + R+
Sbjct: 642 FTKRVYVSLPDEQTRE 657
>UNIPROTKB|B4NBP4 [details] [associations]
symbol:spas "Spastin" species:7260 "Drosophila willistoni"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 eggNOG:COG0464 GO:GO:0008017 GO:GO:0008568
GO:GO:0051013 GO:GO:0005874 SMART:SM00745 EMBL:CH964232 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 OMA:FLNISAA RefSeq:XP_002070222.1
EnsemblMetazoa:FBtr0241799 GeneID:6648037 KEGG:dwi:Dwil_GK11148
FlyBase:FBgn0213159 InParanoid:B4NBP4 Uniprot:B4NBP4
Length = 777
Score = 279 (103.3 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 66/196 (33%), Positives = 107/196 (54%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+++ W +IAG D K+ +++ ++L PE++ G R + +L GPPG G
Sbjct: 497 AKVEWTDIAGQDVAKQALQEMVILPSVRPELFT----GLRAP-----AKGLLLFGPPGNG 547
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +A + A + + + SKY G+ E+L+ +F++A + +IIF+
Sbjct: 548 KTLLARAVATECSAT------FLNISAASLTSKYVGDGEKLVRALFAVARHM-QPSIIFI 600
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALISR 451
DEVDS R S HEA+RR+ + L + DG + ++VV+AATNR Q+LD A + R
Sbjct: 601 DEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRR 660
Query: 452 FDSMITFGLPDHENRQ 467
F + LPD + R+
Sbjct: 661 FTKRVYVSLPDEQTRE 676
>UNIPROTKB|F1MEU3 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:DAAA02031678 EMBL:DAAA02031679 EMBL:DAAA02031680
EMBL:DAAA02031681 IPI:IPI00687055 Ensembl:ENSBTAT00000012179
Uniprot:F1MEU3
Length = 1248
Score = 282 (104.3 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 74/206 (35%), Positives = 106/206 (51%)
Query: 266 DEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAV 325
D +N KS + +++I G +++ ++ L PE+++ KF+ PR
Sbjct: 277 DVDPMNIDKS-VRFDSIGGLSHHIHALKEMVVFPLLYPEIFE--------KFKIQPPRGC 327
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
LF GPPGTGKT AR +AN+ + M + +SK+ GESER L +F A
Sbjct: 328 LFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADC-LSKWVGESERQLRLLFDQAY- 385
Query: 386 LPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLD 445
L +IIF DE+D A R S + I+S LL +DG + ++VVI ATNR +D
Sbjct: 386 LMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSID 445
Query: 446 PALI--SRFDSMITFGLPDHENRQEI 469
PAL RFD F LPD + R+ I
Sbjct: 446 PALRRPGRFDREFLFNLPDQKARKHI 471
>UNIPROTKB|J9NU31 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:AAEX03010776 EMBL:AAEX03010777 EMBL:AAEX03010778
Ensembl:ENSCAFT00000043993 Uniprot:J9NU31
Length = 1291
Score = 282 (104.3 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 74/206 (35%), Positives = 106/206 (51%)
Query: 266 DEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAV 325
D +N KS + +++I G +++ ++ L PE+++ KF+ PR
Sbjct: 225 DVDPMNIDKS-VRFDSIGGLSHHIHALKEMVVFPLLYPEIFE--------KFKIQPPRGC 275
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
LF GPPGTGKT AR +AN+ + M + +SK+ GESER L +F A
Sbjct: 276 LFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADC-LSKWVGESERQLRLLFDQAY- 333
Query: 386 LPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLD 445
L +IIF DE+D A R S + I+S LL +DG + ++VVI ATNR +D
Sbjct: 334 LMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSID 393
Query: 446 PALI--SRFDSMITFGLPDHENRQEI 469
PAL RFD F LPD + R+ I
Sbjct: 394 PALRRPGRFDREFLFNLPDQKARKHI 419
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 268 (99.4 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 85/264 (32%), Positives = 133/264 (50%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++E I G D+Q +EI++ I L ++ PE+++ A G +P+ VL GPPGTGKT
Sbjct: 153 TYEMIGGLDKQIKEIKEVIELPVKHPELFE--ALGIA------QPKGVLLYGPPGTGKTL 204
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ K+ GE R++ ++F +A E P+ IIF+DE
Sbjct: 205 LARAVAHHTDCT------FIRVSGSELVQKFIGEGARMVRELFVMAREHAPS--IIFMDE 256
Query: 397 VDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS +R S +R + LL Q+DGFE K + VI ATNR LD AL+ R
Sbjct: 257 IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGR 316
Query: 452 FDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSW 508
D I F P+ E R +I +++ M SG +++ VC +A +
Sbjct: 317 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM-Y 375
Query: 509 ASKIIRGQITK-DGEQACLPPLQE 531
A + R +T+ D E A +Q+
Sbjct: 376 ALRERRVHVTQEDFEMAVAKVMQK 399
Score = 39 (18.8 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 167 LKVEEHGGGSDMGLRAWDSAVAWQLTLKPPEKQNESGGDRAQSGDMNAR 215
+++++ GG+ GLR + + +L L EK +AQ ++NA+
Sbjct: 15 MEMDDGKGGT--GLRQYYLSKIEELQLIVNEKSQNLRRLQAQRNELNAK 61
>UNIPROTKB|E2RRW1 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
CTD:29028 OMA:PSVYENG GeneTree:ENSGT00550000074694
EMBL:AAEX03008783 RefSeq:XP_850520.1 ProteinModelPortal:E2RRW1
Ensembl:ENSCAFT00000001534 GeneID:475090 KEGG:cfa:475090
Uniprot:E2RRW1
Length = 1373
Score = 291 (107.5 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 77/226 (34%), Positives = 116/226 (51%)
Query: 246 EELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEV 305
+EL + G + +D QL++S + ++++ G +++ ++ L PEV
Sbjct: 375 DELKGIYKDRMKIGASLADVDPMQLDSS---VRFDSVGGLSNHIAALKEMVVFPLLYPEV 431
Query: 306 YDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVM 365
++ KF+ PR LF GPPGTGKT AR +AN+ + M + +
Sbjct: 432 FE--------KFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADC-L 482
Query: 366 SKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDG 425
SK+ GESER L +F A ++ +IIF DE+D A R S + I+S LL +DG
Sbjct: 483 SKWVGESERQLRLLFDQAYQM-RPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDG 541
Query: 426 FEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 469
+ ++VVI ATNR +DPAL RFD F LPD + R+EI
Sbjct: 542 LDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKDARKEI 587
Score = 39 (18.8 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 504 AERSWASKIIRGQITKDGEQACLPPLQE 531
A R A II+ ++ +D EQ C +QE
Sbjct: 1060 ALRDTAYAIIKEELDEDFEQLC-EEIQE 1086
>UNIPROTKB|F1RR16 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 CTD:29028 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:CU582936 EMBL:CU469009
RefSeq:XP_001926065.4 UniGene:Ssc.23683 Ensembl:ENSSSCT00000006566
GeneID:100155780 KEGG:ssc:100155780 Uniprot:F1RR16
Length = 1388
Score = 291 (107.5 bits), Expect = 4.5e-21, Sum P(2) = 4.5e-21
Identities = 77/226 (34%), Positives = 116/226 (51%)
Query: 246 EELDALVSVLQLAGRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEV 305
+EL + G + +D QL++S + ++++ G +++ ++ L PEV
Sbjct: 391 DELKGIYKDRMKIGASLADVDPMQLDSS---VRFDSVGGLSNHIAALKEMVVFPLLYPEV 447
Query: 306 YDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVM 365
++ KF+ PR LF GPPGTGKT AR +AN+ + M + +
Sbjct: 448 FE--------KFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADC-L 498
Query: 366 SKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDG 425
SK+ GESER L +F A ++ +IIF DE+D A R S + I+S LL +DG
Sbjct: 499 SKWVGESERQLRLLFDQAYQM-RPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDG 557
Query: 426 FEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 469
+ ++VVI ATNR +DPAL RFD F LPD + R+EI
Sbjct: 558 LDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKDARKEI 603
Score = 39 (18.8 bits), Expect = 4.5e-21, Sum P(2) = 4.5e-21
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 504 AERSWASKIIRGQITKDGEQACLPPLQE 531
A R A II+ ++ +D EQ C +QE
Sbjct: 1076 ALRDTAYAIIKEELDEDFEQLC-EEIQE 1102
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 271 (100.5 bits), Expect = 4.6e-21, P = 4.6e-21
Identities = 87/277 (31%), Positives = 136/277 (49%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L PE + ++ E P+ VL GPPGT
Sbjct: 169 KPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLG------IEP--PKGVLLFGPPGT 220
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A +P+ + E+V KY GE R++ ++F +A +IF
Sbjct: 221 GKTLCARAVANRTDAC---FIPV--IGSELVQ-KYVGEGARMVRELFEMART-KKACLIF 273
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 274 FDEIDAIGGARFDDGAGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F LPD E R I +A+ +G +IR VC +A
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 393 GM-FAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 271 (100.5 bits), Expect = 4.6e-21, P = 4.6e-21
Identities = 87/277 (31%), Positives = 136/277 (49%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L PE + ++ E P+ VL GPPGT
Sbjct: 169 KPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLG------IEP--PKGVLLFGPPGT 220
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A +P+ + E+V KY GE R++ ++F +A +IF
Sbjct: 221 GKTLCARAVANRTDAC---FIPV--IGSELVQ-KYVGEGARMVRELFEMART-KKACLIF 273
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 274 FDEIDAIGGARFDDGAGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F LPD E R I +A+ +G +IR VC +A
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 393 GM-FAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
>UNIPROTKB|Q9ULI0 [details] [associations]
symbol:ATAD2B "ATPase family AAA domain-containing protein
2B" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
HOVERGEN:HBG080873 HOGENOM:HOG000034119 EMBL:AC009242 EMBL:AC066692
EMBL:AC079924 EMBL:AK094821 EMBL:AK131301 EMBL:AB033066
IPI:IPI00456004 IPI:IPI00739581 RefSeq:NP_001229267.1
RefSeq:NP_060022.1 UniGene:Hs.467862 PDB:2DKW PDB:3LXJ PDBsum:2DKW
PDBsum:3LXJ ProteinModelPortal:Q9ULI0 SMR:Q9ULI0 PhosphoSite:Q9ULI0
DMDM:296439432 PaxDb:Q9ULI0 PRIDE:Q9ULI0 Ensembl:ENST00000238789
GeneID:54454 KEGG:hsa:54454 UCSC:uc002rei.4 UCSC:uc002rek.4
CTD:54454 GeneCards:GC02M023971 HGNC:HGNC:29230 HPA:HPA034555
neXtProt:NX_Q9ULI0 PharmGKB:PA162377039 InParanoid:Q9ULI0
OMA:NAQDFYH OrthoDB:EOG49KFQ1 EvolutionaryTrace:Q9ULI0
GenomeRNAi:54454 NextBio:56685 ArrayExpress:Q9ULI0 Bgee:Q9ULI0
CleanEx:HS_ATAD2B Genevestigator:Q9ULI0 GermOnline:ENSG00000119778
GO:GO:0070577 InterPro:IPR018359 Uniprot:Q9ULI0
Length = 1458
Score = 282 (104.3 bits), Expect = 4.8e-21, P = 4.8e-21
Identities = 74/206 (35%), Positives = 106/206 (51%)
Query: 266 DEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAV 325
D +N KS + +++I G +++ ++ L PE+++ KF+ PR
Sbjct: 387 DVDPMNIDKS-VRFDSIGGLSHHIHALKEMVVFPLLYPEIFE--------KFKIQPPRGC 437
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
LF GPPGTGKT AR +AN+ + M + +SK+ GESER L +F A
Sbjct: 438 LFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADC-LSKWVGESERQLRLLFDQAY- 495
Query: 386 LPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLD 445
L +IIF DE+D A R S + I+S LL +DG + ++VVI ATNR +D
Sbjct: 496 LMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSID 555
Query: 446 PALI--SRFDSMITFGLPDHENRQEI 469
PAL RFD F LPD + R+ I
Sbjct: 556 PALRRPGRFDREFLFNLPDQKARKHI 581
>UNIPROTKB|F1P871 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 OMA:NAQDFYH InterPro:IPR018359
GeneTree:ENSGT00550000074694 EMBL:AAEX03010776 EMBL:AAEX03010777
EMBL:AAEX03010778 Ensembl:ENSCAFT00000006311 Uniprot:F1P871
Length = 1464
Score = 282 (104.3 bits), Expect = 4.8e-21, P = 4.8e-21
Identities = 74/206 (35%), Positives = 106/206 (51%)
Query: 266 DEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAV 325
D +N KS + +++I G +++ ++ L PE+++ KF+ PR
Sbjct: 390 DVDPMNIDKS-VRFDSIGGLSHHIHALKEMVVFPLLYPEIFE--------KFKIQPPRGC 440
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
LF GPPGTGKT AR +AN+ + M + +SK+ GESER L +F A
Sbjct: 441 LFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADC-LSKWVGESERQLRLLFDQAY- 498
Query: 386 LPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLD 445
L +IIF DE+D A R S + I+S LL +DG + ++VVI ATNR +D
Sbjct: 499 LMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSID 558
Query: 446 PALI--SRFDSMITFGLPDHENRQEI 469
PAL RFD F LPD + R+ I
Sbjct: 559 PALRRPGRFDREFLFNLPDQKARKHI 584
>UNIPROTKB|F1MEY1 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 OMA:NAQDFYH InterPro:IPR018359
GeneTree:ENSGT00550000074694 EMBL:DAAA02031678 EMBL:DAAA02031679
EMBL:DAAA02031680 EMBL:DAAA02031681 IPI:IPI01003034
Ensembl:ENSBTAT00000022935 Uniprot:F1MEY1
Length = 1465
Score = 282 (104.3 bits), Expect = 4.8e-21, P = 4.8e-21
Identities = 74/206 (35%), Positives = 106/206 (51%)
Query: 266 DEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAV 325
D +N KS + +++I G +++ ++ L PE+++ KF+ PR
Sbjct: 392 DVDPMNIDKS-VRFDSIGGLSHHIHALKEMVVFPLLYPEIFE--------KFKIQPPRGC 442
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
LF GPPGTGKT AR +AN+ + M + +SK+ GESER L +F A
Sbjct: 443 LFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADC-LSKWVGESERQLRLLFDQAY- 500
Query: 386 LPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLD 445
L +IIF DE+D A R S + I+S LL +DG + ++VVI ATNR +D
Sbjct: 501 LMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSID 560
Query: 446 PALI--SRFDSMITFGLPDHENRQEI 469
PAL RFD F LPD + R+ I
Sbjct: 561 PALRRPGRFDREFLFNLPDQKARKHI 586
>ZFIN|ZDB-GENE-050522-514 [details] [associations]
symbol:katna1 "katanin p60 (ATPase-containing)
subunit A 1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0031122 "cytoplasmic microtubule organization" evidence=IMP]
[GO:0048675 "axon extension" evidence=IGI;IMP] [GO:0030496
"midbody" evidence=ISS] [GO:0000922 "spindle pole" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0005819 "spindle"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-050522-514
GO:GO:0005524 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
GO:GO:0005815 HSSP:Q01853 eggNOG:COG0464 GO:GO:0008568
InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0005874
GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0048676 EMBL:BX255904
KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
GeneTree:ENSGT00550000074466 CTD:11104 OrthoDB:EOG4CJVGZ
EMBL:BC095321 IPI:IPI00500630 RefSeq:NP_001018440.1
UniGene:Dr.78566 ProteinModelPortal:Q5RII9
Ensembl:ENSDART00000043316 GeneID:553631 KEGG:dre:553631
InParanoid:Q5RII9 OMA:IMERDIL NextBio:20880368 Bgee:Q5RII9
Uniprot:Q5RII9
Length = 485
Score = 273 (101.2 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 89/298 (29%), Positives = 140/298 (46%)
Query: 267 EPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAV 325
E + + ++W++IA ++ K+ +++ ++L + PE + +G R RP + V
Sbjct: 191 ERDIISQNPNVTWDDIADLEEAKKLLKEAVVLPMWMPEFF----KGIR------RPWKGV 240
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
L GPPGTGKT A+ +A + V + SKY GESE+L+ +F +A
Sbjct: 241 LMVGPPGTGKTLLAKAVATECRTT------FFNVSSSTLTSKYRGESEKLVRLLFEMARF 294
Query: 386 LPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDGF----EQD--KKVVVIAAT 438
IF+DE+DS R SE HEA+RR+ + LL Q+DG E D K V+V+AAT
Sbjct: 295 YAP-TTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDPSKMVMVLAAT 353
Query: 439 NRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGR 495
N D+D AL R + I LP + R ++ K M SG
Sbjct: 354 NFPWDIDEALRRRLEKRIYIPLPSAKGRVDLLKINLKELDLANDVNMDKIAEQMEGYSGA 413
Query: 496 DIRDVCQQAERSWASKIIRGQITKD-----GEQACLPPLQEYIESATNRRRSLLDAAE 548
DI +VC+ A + I G ++ ++ +P E E+A + + AA+
Sbjct: 414 DITNVCRDASLMAMRRRIEGLTPEEIRNLPKDEMHMPTTMEDFETALKKVSKSVSAAD 471
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 272 (100.8 bits), Expect = 5.1e-21, P = 5.1e-21
Identities = 82/246 (33%), Positives = 127/246 (51%)
Query: 269 QLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFE 328
+L+ + +E S+ +I G + Q +E+ +++ L L PE+Y+++ G + P+ V+
Sbjct: 194 KLDKAPTE-SYADIGGLESQIQEVRESVELPLLHPELYEEM--GIK------PPKGVILY 244
Query: 329 GPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LP 387
G PGTGKT A+ +ANQ A L V E++ KY G+ RL+ ++F +A E P
Sbjct: 245 GAPGTGKTLLAKAVANQTSA-----TFLRIVGSELIQ-KYLGDGPRLVRQIFQVAAEHAP 298
Query: 388 NGAIIFLDEVDSFAVAR-DSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQD 443
+ I+F+DE+D+ R DS E R +L LL Q+DGF+ V VI ATN+ +
Sbjct: 299 S--IVFIDEIDAIGTKRYDSTSGGEREIQRTMLE-LLNQLDGFDDRGDVKVIMATNKIET 355
Query: 444 LDPALI--SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIR 498
LDPALI R D I F PD +++I + +SG DIR
Sbjct: 356 LDPALIRPGRIDRKILFENPDQNTKKKIFTLHTSKMSLGDDVDLDEFINQKDDLSGADIR 415
Query: 499 DVCQQA 504
+C +A
Sbjct: 416 AICTEA 421
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 277 (102.6 bits), Expect = 5.1e-21, P = 5.1e-21
Identities = 77/238 (32%), Positives = 126/238 (52%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++++ I G Q + I +T+ L L+ E++ + + PR VL GPPGTGK
Sbjct: 314 QVTYDMIGGLSSQLKTIRETVELPLKRAELFKS--------YGISPPRGVLLYGPPGTGK 365
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ IAN+ GA V ++ P E++ SK+YGESE L ++F+ A+ L +IIF+D
Sbjct: 366 TLIAKAIANEVGAH----VTVINGP-EII-SKFYGESESRLRQIFAEAS-LRRPSIIFID 418
Query: 396 EVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALI--S 450
E+D+ R+ +E +R+++ LL +DG + ++VV+ ATNR LD AL
Sbjct: 419 ELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPG 478
Query: 451 RFDSMITFGLPDHENRQEIAAQYAK---HXXXXXXXXXXXXXXX-MSGRDIRDVCQQA 504
RFD I G+P+ ++R +I + K H G D+ +C++A
Sbjct: 479 RFDKEIEIGIPNAQDRLDILQKLLKKVPHSLTAAEMMQLADSAHGYVGADLAALCKEA 536
Score = 157 (60.3 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 40/129 (31%), Positives = 71/129 (55%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
++SW +I G + K +++ + L+ P+ + I G + P+ VL GPPG K
Sbjct: 588 KVSWSDIGGLEDVKLKLKQAVEWPLKHPDSF--IRMGIQ------PPKGVLLYGPPGCSK 639
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ +A+++G + + V +M+KY GESER + ++F A + + +I+F D
Sbjct: 640 TMIAKALAHESG------LNFLAVKGPELMNKYVGESERAVREIFRKAR-MVSPSILFFD 692
Query: 396 EVDSFAVAR 404
E+D+ AV R
Sbjct: 693 EIDALAVER 701
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 278 (102.9 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 84/245 (34%), Positives = 120/245 (48%)
Query: 231 DKPEI-EFIKKGSLTSEELDALVSVLQLAGRRIY--GLDEPQ-LNTSKSEISWENIAGYD 286
D+P I +F S+ E D L + + Y G +E Q + S +++ +I G
Sbjct: 226 DEPRIYKFTAASSMEIETPDLLKLPHEDRTQSAYNQGSEETQNFDGPPSAVTFSSIGGLQ 285
Query: 287 QQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTSCARVIANQA 346
Q +I D + L Q+PE++ F PR VL GPPGTGKT R +A +A
Sbjct: 286 AQIAQIRDIVELPFQNPELFKF--------FNIMPPRGVLLYGPPGTGKTMVMRAVAAEA 337
Query: 347 GAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDS 406
A + + V+ KY GE+E L K+F A +IIF+DE+D+ A R
Sbjct: 338 NAQ------VFTIDGPSVVGKYLGETESRLRKIFEDARA-HQPSIIFIDEIDALAPKRTE 390
Query: 407 EMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHE 464
++ EA R ++ LL +DG KVVVIAATNR +D AL R + I G+PD
Sbjct: 391 DVSEAESRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKS 450
Query: 465 NRQEI 469
R +I
Sbjct: 451 ARLDI 455
Score = 234 (87.4 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 60/188 (31%), Positives = 98/188 (52%)
Query: 322 PRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFS 381
P+ VL GPPG KT A+ IA + G + + V + K+ GESER + +VF
Sbjct: 582 PKGVLLYGPPGCSKTITAKAIATETG------LNFIAVKGPELFDKFVGESERAVRQVFQ 635
Query: 382 LANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRK 441
A + + ++IF DE+D+ R + ++ R+++ LL ++DG E + V+V+AATNR
Sbjct: 636 KARQA-SPSVIFFDEIDALTANRGED--NSSDRVVAALLNELDGIEALRNVLVLAATNRP 692
Query: 442 QDLDPALI--SRFDSMITFGLPDHENRQEIA---AQYAKHXXXXXXXXXXXXXXXMSGRD 496
+DPAL+ R D ++ G P+ E R++I A+ K SG +
Sbjct: 693 DMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAE 752
Query: 497 IRDVCQQA 504
+ +CQ+A
Sbjct: 753 VVALCQEA 760
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 285 (105.4 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 79/253 (31%), Positives = 133/253 (52%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S+ +++++ I G + Q + I + I L L+ PE++ + PR +L GPPG
Sbjct: 346 SQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKS--------YGIPAPRGLLLYGPPG 397
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
TGKT AR +AN+ GA V ++ P E++ SK+YGE+E L ++F+ A L + +II
Sbjct: 398 TGKTMIARAVANEVGAY----VSVINGP-EII-SKFYGETEARLRQIFAEAT-LRHPSII 450
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALI 449
F+DE+D+ R+ E +R+++ LL +DG + +V+V+ ATNR Q LD AL
Sbjct: 451 FIDELDALCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALR 510
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAK---HXXXXXXXXXXXXXXX-MSGRDIRDVCQQ 503
RFD I G+P+ ++R +I + + H G D++ +C +
Sbjct: 511 RPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNE 570
Query: 504 AERSWASKIIRGQ 516
A +++R Q
Sbjct: 571 AGLHALRRVLRKQ 583
Score = 260 (96.6 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 69/197 (35%), Positives = 108/197 (54%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+SW +I G + K +++ + L+ P+ ++ + G + P+ VL GPPG KT
Sbjct: 624 VSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRM--GIQ------PPKGVLLYGPPGCSKT 675
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ +AN++G + + + +M+KY GESER + ++F A + +IIF DE
Sbjct: 676 MIAKALANESG------LNFLAIKGPELMNKYVGESERAVREIFRKARAVAP-SIIFFDE 728
Query: 397 VDSFAVARDSEMH--EATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRF 452
+D+ AV R S R+L+ LL ++DG EQ K V V+AATNR +D AL+ R
Sbjct: 729 LDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRI 788
Query: 453 DSMITFGLPDHENRQEI 469
D +I LPD R+EI
Sbjct: 789 DRIIYVPLPDAATRREI 805
Score = 39 (18.8 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 136 AVKGQKVTIKFQVPPACEIPQLIANLVSHLGL 167
A G V F ++P+ N + HLGL
Sbjct: 40 AAPGMLVVTNFLEKVDGKVPKTFQNSLVHLGL 71
>UNIPROTKB|E9PSU0 [details] [associations]
symbol:LOC500625 "Protein LOC500625" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 RGD:1566199 IPI:IPI00476926
Ensembl:ENSRNOT00000006877 ArrayExpress:E9PSU0 Uniprot:E9PSU0
Length = 1458
Score = 281 (104.0 bits), Expect = 6.2e-21, P = 6.2e-21
Identities = 74/206 (35%), Positives = 105/206 (50%)
Query: 266 DEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAV 325
D +N KS + +++I G +++ ++ L PE+++ KF+ PR
Sbjct: 384 DVDPMNIDKS-VRFDSIGGLSHHIHALKEMVVFPLLYPEIFE--------KFKIQPPRGC 434
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
LF GPPGTGKT AR +AN+ + M + +SK+ GESER L +F A
Sbjct: 435 LFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADC-LSKWVGESERQLRLLFDQAY- 492
Query: 386 LPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLD 445
L +IIF DE+D A R S + I+S LL +DG + ++VVI ATNR +D
Sbjct: 493 LMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSID 552
Query: 446 PALI--SRFDSMITFGLPDHENRQEI 469
PAL RFD F LPD R+ I
Sbjct: 553 PALRRPGRFDREFLFNLPDQRARKHI 578
>MGI|MGI:1344353 [details] [associations]
symbol:Katna1 "katanin p60 (ATPase-containing) subunit A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000922 "spindle pole" evidence=ISO] [GO:0001578
"microtubule bundle formation" evidence=IGI] [GO:0001764 "neuron
migration" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005813 "centrosome"
evidence=IDA] [GO:0005819 "spindle" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=IDA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=ISO] [GO:0008104
"protein localization" evidence=IPI] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0010977
"negative regulation of neuron projection development"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030424
"axon" evidence=ISO;IDA] [GO:0030426 "growth cone" evidence=ISO]
[GO:0030496 "midbody" evidence=ISO] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IDA] [GO:0043025 "neuronal cell
body" evidence=ISO] [GO:0045502 "dynein binding" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051013 "microtubule severing" evidence=IGI;ISO] [GO:0051301
"cell division" evidence=IEA] [GO:0051329 "interphase of mitotic
cell cycle" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1344353 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0001764 GO:GO:0008104 GO:GO:0051301
GO:GO:0007067 GO:GO:0005811 GO:GO:0030424 GO:GO:0016887
eggNOG:COG0464 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0005874
GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0045502 HAMAP:MF_03023
HOGENOM:HOG000225142 OrthoDB:EOG4CJVGZ EMBL:AF153197 EMBL:BC009136
IPI:IPI00125451 UniGene:Mm.28127 UniGene:Mm.421297 PDB:2RPA
PDBsum:2RPA ProteinModelPortal:Q9WV86 SMR:Q9WV86 STRING:Q9WV86
PhosphoSite:Q9WV86 PRIDE:Q9WV86 UCSC:uc007eii.2 InParanoid:Q9WV86
EvolutionaryTrace:Q9WV86 CleanEx:MM_KATNA1 Genevestigator:Q9WV86
GermOnline:ENSMUSG00000019794 Uniprot:Q9WV86
Length = 491
Score = 272 (100.8 bits), Expect = 6.8e-21, P = 6.8e-21
Identities = 92/299 (30%), Positives = 139/299 (46%)
Query: 267 EPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAV 325
E + + + W +IA + K+ +++ ++L + PE + +G R RP + V
Sbjct: 196 ERDIISQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFF----KGIR------RPWKGV 245
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
L GPPGTGKT A+ +A + V + SKY GESE+L+ +F +A
Sbjct: 246 LMVGPPGTGKTLLAKAVATECKTT------FFNVSSSTLTSKYRGESEKLVRLLFEMAR- 298
Query: 386 LPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDGF----EQD---KKVVVIAA 437
+ A IF+DE+DS R SE HEA+RR+ + LL Q+DG E D K V+V+AA
Sbjct: 299 FYSPATIFIDEIDSICSRRGTSEEHEASRRMKAELLVQMDGVGGASENDDPSKMVMVLAA 358
Query: 438 TNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SG 494
TN D+D AL R + I LP + R+E+ + M SG
Sbjct: 359 TNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSG 418
Query: 495 RDIRDVCQQAERSWASKIIRG----QITKDGEQAC-LPPLQEYIESATNRRRSLLDAAE 548
DI +VC+ A + I G +I +A +P E E A + + AA+
Sbjct: 419 ADITNVCRDASLMAMRRRIEGLTPEEIRNLSREAMHMPTTMEDFEMALKKISKSVSAAD 477
>UNIPROTKB|F1NN52 [details] [associations]
symbol:F1NN52 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:AADN02022496 EMBL:AADN02022497
EMBL:AADN02022498 EMBL:AADN02022499 IPI:IPI00588479
Ensembl:ENSGALT00000026409 Uniprot:F1NN52
Length = 1337
Score = 287 (106.1 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 80/252 (31%), Positives = 123/252 (48%)
Query: 259 GRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFE 318
G+ + +D Q+++S + ++ + G +++ ++ L PEV++ +F+
Sbjct: 346 GKSLADVDPMQIDSS---VRFDAVGGLSDHISALKEMVVFPLLYPEVFE--------RFK 394
Query: 319 SNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGK 378
PR LF GPPGTGKT AR +AN+ + M + +SK+ GESER L
Sbjct: 395 IQPPRGCLFYGPPGTGKTLVARALANECSQGNRRVAFFMRKGADC-LSKWVGESERQLRL 453
Query: 379 VFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAAT 438
+F A ++ +IIF DE+D A R S+ + I+S LL +DG + +VVVI AT
Sbjct: 454 LFDQAYQM-RPSIIFFDEIDGLAPVRSSKQDQIHSSIVSTLLALMDGLDGRGEVVVIGAT 512
Query: 439 NRKQDLDPALI--SRFDSMITFGLPDHENRQEI----AAQYAKHXXXXXXXXXXXXXXXM 492
NR +DPAL RFD FGLP+ E R+EI +
Sbjct: 513 NRLDSIDPALRRPGRFDREFLFGLPNKEARKEIFKIHTRDWTPKLLDTFIDELATECVGY 572
Query: 493 SGRDIRDVCQQA 504
G DI+ +C +A
Sbjct: 573 CGADIKSLCAEA 584
Score = 41 (19.5 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 23 SPRGQPRRLPHRSLEQQ 39
SPR +P RL H L Q
Sbjct: 250 SPRKRPSRLVHDILHSQ 266
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 270 (100.1 bits), Expect = 7.2e-21, P = 7.2e-21
Identities = 76/240 (31%), Positives = 118/240 (49%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L L SPE + K + P+ +L GPPGT
Sbjct: 180 KPDVTYSDVGGCKEQIEKLREVVELPLLSPERF--------VKLGIDPPKGILLYGPPGT 231
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A IIF
Sbjct: 232 GKTLCARAVANRTDA-----TFIRVIGSELVQ-KYVGEGARMVRELFEMART-KKACIIF 284
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DEVD+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 285 FDEVDAIGGARFDDGAGGDNEVQRTMLE-LITQLDGFDPRGNIKVMFATNRPNTLDPALL 343
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D + F LPD E R I ++K +G ++R VC +A
Sbjct: 344 RPGRIDRKVEFSLPDLEGRANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEA 403
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 270 (100.1 bits), Expect = 7.5e-21, P = 7.5e-21
Identities = 75/213 (35%), Positives = 116/213 (54%)
Query: 267 EPQLNTSKSEI----SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP 322
+P +N K + S+ +I G + Q +EI++ + L L PE+Y+++ G + P
Sbjct: 174 DPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEM--GIK------PP 225
Query: 323 RAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSL 382
+ V+ G PGTGKT A+ +ANQ A L V E++ KY G+ RL+ ++F+
Sbjct: 226 KGVILYGAPGTGKTLLAKAVANQTSA-----TFLRVVGSELIQ-KYLGDGPRLVRQLFNA 279
Query: 383 ANELPNGAIIFLDEVDSFAVARDSEMHEATRRI---LSVLLRQIDGFEQDKK-VVVIAAT 438
A E + +I+F+DE+D+ R A R I + LL Q+DGF+ ++ + VI AT
Sbjct: 280 AEE-HSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMAT 338
Query: 439 NRKQDLDPALI--SRFDSMITFGLPDHENRQEI 469
NR DLDPALI R D I F PD +++I
Sbjct: 339 NRISDLDPALIRPGRIDRKILFENPDEATKRKI 371
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 268 (99.4 bits), Expect = 7.6e-21, P = 7.6e-21
Identities = 85/264 (32%), Positives = 133/264 (50%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++E I G D+Q +EI++ I L ++ PE+++ A G +P+ VL GPPGTGKT
Sbjct: 155 TYEMIGGLDKQIKEIKEVIELPVKHPELFE--ALGIA------QPKGVLLYGPPGTGKTL 206
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ K+ GE R++ ++F +A E P+ IIF+DE
Sbjct: 207 LARAVAHHTDCT------FIRVSGSELVQKFIGEGARMVRELFVMAREHAPS--IIFMDE 258
Query: 397 VDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS +R S +R + LL Q+DGFE K + VI ATNR LD AL+ R
Sbjct: 259 IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGR 318
Query: 452 FDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSW 508
D I F P+ E R +I +++ M SG +++ VC +A +
Sbjct: 319 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM-Y 377
Query: 509 ASKIIRGQITK-DGEQACLPPLQE 531
A + R +T+ D E A +Q+
Sbjct: 378 ALRERRVHVTQEDFEMAVAKVMQK 401
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 268 (99.4 bits), Expect = 7.6e-21, P = 7.6e-21
Identities = 85/264 (32%), Positives = 133/264 (50%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
++E I G D+Q +EI++ I L ++ PE+++ A G +P+ VL GPPGTGKT
Sbjct: 155 TYEMIGGLDKQIKEIKEVIELPVKHPELFE--ALGIA------QPKGVLLYGPPGTGKTL 206
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ K+ GE R++ ++F +A E P+ IIF+DE
Sbjct: 207 LARAVAHHTDCT------FIRVSGSELVQKFIGEGARMVRELFVMAREHAPS--IIFMDE 258
Query: 397 VDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS +R S +R + LL Q+DGFE K + VI ATNR LD AL+ R
Sbjct: 259 IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGR 318
Query: 452 FDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSW 508
D I F P+ E R +I +++ M SG +++ VC +A +
Sbjct: 319 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM-Y 377
Query: 509 ASKIIRGQITK-DGEQACLPPLQE 531
A + R +T+ D E A +Q+
Sbjct: 378 ALRERRVHVTQEDFEMAVAKVMQK 401
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 267 (99.0 bits), Expect = 7.6e-21, P = 7.6e-21
Identities = 74/236 (31%), Positives = 118/236 (50%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
+++ + G D+Q +EI++ I L ++ PE+++ + +P+ V+ GPPGTGKT
Sbjct: 142 TYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIA--------QPKGVILYGPPGTGKTL 193
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
AR +A+ + V ++ KY GE R++ ++F +A E P+ IIF+DE
Sbjct: 194 LARAVAHHTECK------FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS--IIFMDE 245
Query: 397 VDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+DS +R S +R + LL Q+DGFE K + +I ATNR LDPAL+ R
Sbjct: 246 IDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGR 305
Query: 452 FDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
D I F P R +I +++ M SG D++ VC +A
Sbjct: 306 IDRKIEFPAPTVAARTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEA 361
>UNIPROTKB|B4K799 [details] [associations]
symbol:spas "Spastin" species:7230 "Drosophila mojavensis"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 GO:GO:0008017 GO:GO:0008568 GO:GO:0051013
GO:GO:0005874 EMBL:CH933806 SMART:SM00745 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 RefSeq:XP_001998762.1
EnsemblMetazoa:FBtr0174870 GeneID:6572656 KEGG:dmo:Dmoj_GI24145
FlyBase:FBgn0146868 InParanoid:B4K799 Uniprot:B4K799
Length = 765
Score = 276 (102.2 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 66/196 (33%), Positives = 107/196 (54%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+++ W +IAG D K+ +++ ++L PE++ G R + +L GPPG G
Sbjct: 485 AKVEWTDIAGQDVAKQALQEMVILPSVRPELFT----GLRAP-----AKGLLLFGPPGNG 535
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +A + A + + + SKY G+ E+L+ +F++A L +IIF+
Sbjct: 536 KTLLARAVATECSAT------FLNISAASLTSKYVGDGEKLVRALFAVARHL-QPSIIFI 588
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFE---QDKKVVVIAATNRKQDLDPALISR 451
DEVDS R S HEA+RR+ + L + DG + ++VV+AATNR Q+LD A + R
Sbjct: 589 DEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALRR 648
Query: 452 FDSMITFGLPDHENRQ 467
F + LP+ + R+
Sbjct: 649 FTKRVYVSLPEVQTRE 664
>UNIPROTKB|B3M301 [details] [associations]
symbol:spas "Spastin" species:7217 "Drosophila ananassae"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 eggNOG:COG0464 GO:GO:0008017 GO:GO:0008568
GO:GO:0051013 GO:GO:0005874 EMBL:CH902617 SMART:SM00745 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 RefSeq:XP_001953840.1
EnsemblMetazoa:FBtr0121734 GeneID:6499823 KEGG:dan:Dana_GF17034
FlyBase:FBgn0094053 InParanoid:B3M301 Uniprot:B3M301
Length = 770
Score = 276 (102.2 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 65/196 (33%), Positives = 107/196 (54%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+++ W +IAG + K+ +++ ++L PE++ G R + +L GPPG G
Sbjct: 490 AKVEWSDIAGQEVAKQALQEMVILPSVRPELFT----GLRAP-----AKGLLLFGPPGNG 540
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +A + A + + + SKY G+ E+L+ +F++A + +IIF+
Sbjct: 541 KTLLARAVATECSAT------FLNISAASLTSKYVGDGEKLVRALFAVARHM-QPSIIFI 593
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALISR 451
DEVDS R S HEA+RR+ + L + DG + ++VV+AATNR Q+LD A + R
Sbjct: 594 DEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRR 653
Query: 452 FDSMITFGLPDHENRQ 467
F + LPD + R+
Sbjct: 654 FTKRVYVSLPDEQTRE 669
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 277 (102.6 bits), Expect = 8.1e-21, P = 8.1e-21
Identities = 78/250 (31%), Positives = 130/250 (52%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++++ I G Q + I + I L L+ PE++ + PR VL GPPGTGK
Sbjct: 349 KVTYDMIGGLSSQLKAIREIIELPLKQPELFKS--------YGIPAPRGVLLYGPPGTGK 400
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T AR +AN+ GA V ++ P E++ SK+YGE+E L ++F+ A L + +IIF+D
Sbjct: 401 TMIARAVANEVGAY----VSVINGP-EII-SKFYGETEAKLRQIFAEAT-LRHPSIIFID 453
Query: 396 EVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALI--S 450
E+D+ R+ +E +R+++ LL +DG + +V+V+ ATNR LD AL
Sbjct: 454 ELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPG 513
Query: 451 RFDSMITFGLPDHENRQEIAAQYAK---HXXXXXXXXXXXXXXX-MSGRDIRDVCQQAER 506
RFD I G+P+ ++R +I + + H G D++ +C +A
Sbjct: 514 RFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGL 573
Query: 507 SWASKIIRGQ 516
+I++ Q
Sbjct: 574 CALRRILKKQ 583
Score = 268 (99.4 bits), Expect = 8.0e-20, P = 8.0e-20
Identities = 71/197 (36%), Positives = 107/197 (54%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+SW +I G + K ++E + L+ PE + I G + P+ VL GPPG KT
Sbjct: 624 VSWSDIGGLESIKLKLEQAVEWPLKHPESF--IRMGIQ------PPKGVLLYGPPGCSKT 675
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ +AN++G + + + +M+KY GESER + + F A + +IIF DE
Sbjct: 676 MIAKALANESG------LNFLAIKGPELMNKYVGESERAVRETFRKARAVAP-SIIFFDE 728
Query: 397 VDSFAVARDSEMH--EATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRF 452
+D+ AV R S + R+L+ LL ++DG EQ K V ++AATNR +D AL+ R
Sbjct: 729 LDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRI 788
Query: 453 DSMITFGLPDHENRQEI 469
D +I LPD R+EI
Sbjct: 789 DRIIYVPLPDAATRREI 805
>UNIPROTKB|B4JII0 [details] [associations]
symbol:spas "Spastin" species:7222 "Drosophila grimshawi"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 eggNOG:COG0464 GO:GO:0008017 GO:GO:0008568
GO:GO:0051013 GO:GO:0005874 EMBL:CH916369 SMART:SM00745 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 RefSeq:XP_001989999.1
EnsemblMetazoa:FBtr0153898 GeneID:6563377 KEGG:dgr:Dgri_GH18484
FlyBase:FBgn0125951 InParanoid:B4JII0 OMA:FLNISAA Uniprot:B4JII0
Length = 782
Score = 276 (102.2 bits), Expect = 8.2e-21, P = 8.2e-21
Identities = 66/196 (33%), Positives = 107/196 (54%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+++ W +IAG D K+ +++ ++L PE++ G R + +L GPPG G
Sbjct: 502 AKVEWTDIAGQDVAKQALQEMVILPSVRPELFT----GLRAP-----AKGLLLFGPPGNG 552
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +A + A + + + SKY G+ E+L+ +F++A + +IIF+
Sbjct: 553 KTLLARAVATECSAT------FLNISAASLTSKYVGDGEKLVRALFAVARHM-QPSIIFI 605
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALISR 451
DEVDS R S HEA+RR+ + L + DG + ++VV+AATNR Q+LD A + R
Sbjct: 606 DEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRR 665
Query: 452 FDSMITFGLPDHENRQ 467
F + LPD + R+
Sbjct: 666 FTKRVYVSLPDVQTRE 681
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 269 (99.8 bits), Expect = 8.6e-21, P = 8.6e-21
Identities = 75/240 (31%), Positives = 117/240 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q + + + L L SPE + K + P+ ++ GPPGT
Sbjct: 173 KPDVTYGDVGGCKEQIERLREVVELPLLSPERF--------VKLGIDPPKGIMLYGPPGT 224
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A IIF
Sbjct: 225 GKTLCARAVANRTDA-----TFIRVIGSELVQ-KYVGEGARMVRELFEMART-KKACIIF 277
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LD AL+
Sbjct: 278 FDEIDAIGGARFDDGAGGDNEVQRTMLE-LITQLDGFDPRGNIKVLFATNRPNTLDEALM 336
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXX---XMSGRDIRDVCQQA 504
R D + FGLPD E R I +AK +G ++R VC +A
Sbjct: 337 RPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEA 396
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 269 (99.8 bits), Expect = 9.8e-21, P = 9.8e-21
Identities = 83/260 (31%), Positives = 127/260 (48%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
S+ +I G + Q +EI++ + L L PE+Y+DI G + P+ V+ GPPGTGKT
Sbjct: 191 SYADIGGLESQIQEIKEAVELPLTHPELYEDI--GIK------PPKGVILYGPPGTGKTL 242
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
A+ +AN+ A L V E++ KY G+ +L+ ++F +A E P+ I+F+DE
Sbjct: 243 LAKAVANETSA-----TFLRVVGSELIQ-KYLGDGPKLVREMFKVAEEHAPS--IVFIDE 294
Query: 397 VDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+D+ R S +R + LL Q+DGF+ V VI ATNR LDPALI R
Sbjct: 295 IDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGR 354
Query: 452 FDSMITFGLPDHENRQEIAAQYAKHXXXX---XXXXXXXXXXXMSGRDIRDVCQQAE--- 505
D I PD + ++ I + +SG DI+ +C +A
Sbjct: 355 IDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLA 414
Query: 506 -RSWASKIIRGQITKDGEQA 524
R KI + + K ++A
Sbjct: 415 LRERRMKITQADLRKARDKA 434
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 269 (99.8 bits), Expect = 9.8e-21, P = 9.8e-21
Identities = 83/260 (31%), Positives = 127/260 (48%)
Query: 278 SWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKTS 337
S+ +I G + Q +EI++ + L L PE+Y+DI G + P+ V+ GPPGTGKT
Sbjct: 191 SYADIGGLESQIQEIKEAVELPLTHPELYEDI--GIK------PPKGVILYGPPGTGKTL 242
Query: 338 CARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE-LPNGAIIFLDE 396
A+ +AN+ A L V E++ KY G+ +L+ ++F +A E P+ I+F+DE
Sbjct: 243 LAKAVANETSA-----TFLRVVGSELIQ-KYLGDGPKLVREMFKVAEEHAPS--IVFIDE 294
Query: 397 VDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SR 451
+D+ R S +R + LL Q+DGF+ V VI ATNR LDPALI R
Sbjct: 295 IDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGR 354
Query: 452 FDSMITFGLPDHENRQEIAAQYAKHXXXX---XXXXXXXXXXXMSGRDIRDVCQQAE--- 505
D I PD + ++ I + +SG DI+ +C +A
Sbjct: 355 IDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLA 414
Query: 506 -RSWASKIIRGQITKDGEQA 524
R KI + + K ++A
Sbjct: 415 LRERRMKITQADLRKARDKA 434
>TAIR|locus:2031005 [details] [associations]
symbol:AT1G50140 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010332
"response to gamma radiation" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016926
"protein desumoylation" evidence=RCA] [GO:0032204 "regulation of
telomere maintenance" evidence=RCA] [GO:0032504 "multicellular
organism reproduction" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0043247 "telomere
maintenance in response to DNA damage" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GO:GO:0005524 GO:GO:0017111
IPI:IPI00520428 RefSeq:NP_175433.2 UniGene:At.38089
ProteinModelPortal:F4I4Y6 SMR:F4I4Y6 PRIDE:F4I4Y6
EnsemblPlants:AT1G50140.1 GeneID:841436 KEGG:ath:AT1G50140
OMA:TRTIRRN Uniprot:F4I4Y6
Length = 1003
Score = 277 (102.6 bits), Expect = 9.8e-21, P = 9.8e-21
Identities = 70/197 (35%), Positives = 112/197 (56%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAVLFEGPPGTGK 335
+ +E+I + K+ + + ++L ++ PE++ ARG RP + +L GPPGTGK
Sbjct: 711 VKFEDIGALEDVKKALNELVILPMRRPELF---ARGNLL-----RPCKGILLFGPPGTGK 762
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ +A +AGA + + + SK++G++E+L +FS A +L IIF+D
Sbjct: 763 TLLAKALATEAGAN------FISITGSTLTSKWFGDAEKLTKALFSFATKLAP-VIIFVD 815
Query: 396 EVDSFAVARD-SEMHEATRRILSVLLRQIDGF--EQDKKVVVIAATNRKQDLDPALISRF 452
E+DS AR S HEATRR+ + + DG + ++++++ ATNR DLD A+I R
Sbjct: 816 EIDSLLGARGGSSEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIRRL 875
Query: 453 DSMITFGLPDHENRQEI 469
I LPD ENR +I
Sbjct: 876 PRRIYVDLPDAENRLKI 892
>UNIPROTKB|B4G437 [details] [associations]
symbol:spas "Spastin" species:7234 "Drosophila persimilis"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 GO:GO:0008017 GO:GO:0008568 GO:GO:0051013
GO:GO:0005874 SMART:SM00745 EMBL:CH479179 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 RefSeq:XP_002013462.1
EnsemblMetazoa:FBtr0189009 GeneID:6588451 KEGG:dpe:Dper_GL23394
FlyBase:FBgn0160984 Uniprot:B4G437
Length = 788
Score = 275 (101.9 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 66/196 (33%), Positives = 107/196 (54%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+++ W +IAG + K+ +++ ++L PE++ G R + +L GPPG G
Sbjct: 508 AKVEWTDIAGQEVAKQALQEMVILPSVRPELFT----GLRAP-----AKGLLLFGPPGNG 558
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +A + A + + + SKY G+ E+L+ +F++A L +IIF+
Sbjct: 559 KTLLARAVATECSAT------FLNISAASLTSKYVGDGEKLVRALFAVARHL-QPSIIFI 611
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALISR 451
DEVDS R S HEA+RR+ + L + DG + ++VV+AATNR Q+LD A + R
Sbjct: 612 DEVDSLLSERSSGEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRR 671
Query: 452 FDSMITFGLPDHENRQ 467
F + LPD + R+
Sbjct: 672 FTKRVYVSLPDEQTRE 687
>UNIPROTKB|Q298L4 [details] [associations]
symbol:spas "Spastin" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0005813 "centrosome" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0051013 "microtubule severing"
evidence=ISS] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005737
GO:GO:0005813 GO:GO:0005694 GO:GO:0007399 GO:GO:0030154
GO:GO:0051301 GO:GO:0007067 EMBL:CM000070 Pfam:PF04212
eggNOG:COG0464 GO:GO:0008017 GO:GO:0008568 GO:GO:0051013
GO:GO:0005874 GenomeReviews:CM000070_GR SMART:SM00745 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 OMA:FLNISAA RefSeq:XP_001358798.1
ProteinModelPortal:Q298L4 SMR:Q298L4 GeneID:4801757
KEGG:dpo:Dpse_GA19274 FlyBase:FBgn0079271 InParanoid:Q298L4
Uniprot:Q298L4
Length = 788
Score = 275 (101.9 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 66/196 (33%), Positives = 107/196 (54%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+++ W +IAG + K+ +++ ++L PE++ G R + +L GPPG G
Sbjct: 508 AKVEWTDIAGQEVAKQALQEMVILPSVRPELFT----GLRAP-----AKGLLLFGPPGNG 558
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +A + A + + + SKY G+ E+L+ +F++A L +IIF+
Sbjct: 559 KTLLARAVATECSAT------FLNISAASLTSKYVGDGEKLVRALFAVARHL-QPSIIFI 611
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALISR 451
DEVDS R S HEA+RR+ + L + DG + ++VV+AATNR Q+LD A + R
Sbjct: 612 DEVDSLLSERSSGEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRR 671
Query: 452 FDSMITFGLPDHENRQ 467
F + LPD + R+
Sbjct: 672 FTKRVYVSLPDEQTRE 687
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 269 (99.8 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 78/245 (31%), Positives = 124/245 (50%)
Query: 269 QLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFE 328
+L+ S +E S+ +I G + Q +EI++++ L L PE+Y+++ G + P+ V+
Sbjct: 176 KLDKSPTE-SYADIGGLESQIQEIKESVELPLTHPELYEEM--GIK------PPKGVILY 226
Query: 329 GPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLA-NELP 387
G PGTGKT A+ +ANQ A L V E++ KY G+ RL ++F +A + P
Sbjct: 227 GAPGTGKTLLAKAVANQTSA-----TFLRIVGSELIQ-KYLGDGPRLCRQIFQIAADHAP 280
Query: 388 NGAIIFLDEVDSFAVARDSEMHEATRRI---LSVLLRQIDGFEQDKKVVVIAATNRKQDL 444
+ I+F+DE+D+ R R I + LL Q+DGF+ + VI ATN+ + L
Sbjct: 281 S--IVFIDEIDAIGTKRYESTSGGEREIQRTMLELLNQLDGFDDRGDIKVIMATNKIESL 338
Query: 445 DPALI--SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX---MSGRDIRD 499
DPALI R D I F PD +++I + +SG DI+
Sbjct: 339 DPALIRPGRIDRKILFENPDANTKKKILTIHTSKMSLADDVNLDEIVTGKDDLSGADIKA 398
Query: 500 VCQQA 504
+C +A
Sbjct: 399 ICTEA 403
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 267 (99.0 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 85/275 (30%), Positives = 135/275 (49%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L + PE + K + P+ VL GPPGT
Sbjct: 162 KPDVTYNDVGGCKEQIEKMREVVELPMLHPEKF--------VKLGIDPPKGVLCYGPPGT 213
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT AR +AN+ A + + E+V KY GE R++ ++F +A I+F
Sbjct: 214 GKTLLARAVANRTDACF-----IRVIGSELVQ-KYVGEGARMVRELFQMARS-KKACIVF 266
Query: 394 LDEVDSFAVAR-DSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DEVD+ AR D + +E R +L ++ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 267 FDEVDAIGGARFDDGVGGDNEVQRTMLEIV-NQLDGFDARGNIKVLMATNRPDTLDPALL 325
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D + FGLPD E+R +I + + +G DIR VC +A
Sbjct: 326 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEA 385
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SAT 537
+A + R +T KD A ++ Y + SAT
Sbjct: 386 GM-YAIRARRKTVTEKDFLDAVNKVIKGYQKFSAT 419
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 267 (99.0 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 86/277 (31%), Positives = 134/277 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L PE + ++ E P+ VL GPPGT
Sbjct: 169 KPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLG------IEP--PKGVLLFGPPGT 220
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A +IF
Sbjct: 221 GKTLCARAVANRTDACF-----IRVIGSELVQ-KYVGEGARMVRELFEMART-KKACLIF 273
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 274 FDEIDAIGGARFDDGAGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F LPD E R I +A+ +G +IR VC +A
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 393 GM-FAIRARRKVATEKDFLEAVNKVIKSYAKFSATPR 428
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 267 (99.0 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 86/277 (31%), Positives = 134/277 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L PE + ++ E P+ VL GPPGT
Sbjct: 169 KPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLG------IEP--PKGVLLFGPPGT 220
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A +IF
Sbjct: 221 GKTLCARAVANRTDACF-----IRVIGSELVQ-KYVGEGARMVRELFEMART-KKACLIF 273
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 274 FDEIDAIGGARFDDGAGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F LPD E R I +A+ +G +IR VC +A
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 393 GM-FAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
>UNIPROTKB|E1BSZ5 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 CTD:84056 KO:K07767
OMA:GVMQQIQ GeneTree:ENSGT00550000074466 EMBL:AADN02005228
IPI:IPI00589186 RefSeq:XP_417114.1 UniGene:Gga.16694
ProteinModelPortal:E1BSZ5 PRIDE:E1BSZ5 Ensembl:ENSGALT00000027595
GeneID:418920 KEGG:gga:418920 NextBio:20822044 Uniprot:E1BSZ5
Length = 489
Score = 269 (99.8 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 84/261 (32%), Positives = 125/261 (47%)
Query: 267 EPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAV 325
E + + I W++IA ++ K+ + + ++L + P+ + +G R RP + V
Sbjct: 194 ERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFF----KGIR------RPWKGV 243
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
L GPPGTGKT A+ +A + G V + SKY GESE+L+ +F +A
Sbjct: 244 LMVGPPGTGKTMLAKAVATECGTT------FFNVSSSTLTSKYRGESEKLVRLLFEMARF 297
Query: 386 LPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDG----FEQD---KKVVVIAA 437
A IF+DE+DS R S+ HEA+RR+ S LL Q+DG E D K V+V+AA
Sbjct: 298 YAP-ATIFIDEIDSICSRRGTSDEHEASRRVKSELLVQMDGVGGALENDDPSKMVMVLAA 356
Query: 438 TNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SG 494
TN D+D AL R + I LP + R E+ + + SG
Sbjct: 357 TNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVELDPDISLEEIAEKIEGYSG 416
Query: 495 RDIRDVCQQAERSWASKIIRG 515
DI +VC+ A + I G
Sbjct: 417 ADITNVCRDASLMAMRRRING 437
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 59/183 (32%), Positives = 87/183 (47%)
Query: 259 GRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVY-DDIARGTRCKF 317
GR G PQ + + ++ AGYD+ E + ++S ++P ++ DDIA K
Sbjct: 160 GRDDKGKKIPQEGVADDVLRFDG-AGYDKDLVEALERDIVS-RNPSIHWDDIADLEEAK- 216
Query: 318 ESNRPRAVL-------FEG---P-PGT---GKTSCARVIANQAGAMPWQGVPLMYVPLEV 363
+ R VL F+G P G G + + +A A G V
Sbjct: 217 KLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATEC-GTTFFNVSSST 275
Query: 364 VMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQ 422
+ SKY GESE+L+ +F +A A IF+DE+DS R S+ HEA+RR+ S LL Q
Sbjct: 276 LTSKYRGESEKLVRLLFEMARFYAP-ATIFIDEIDSICSRRGTSDEHEASRRVKSELLVQ 334
Query: 423 IDG 425
+DG
Sbjct: 335 MDG 337
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 266 (98.7 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 86/277 (31%), Positives = 134/277 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L PE + ++ E P+ VL GPPGT
Sbjct: 160 KPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLG------IEP--PKGVLLFGPPGT 211
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A +IF
Sbjct: 212 GKTLCARAVANRTDACF-----IRVIGSELVQ-KYVGEGARMVRELFEMART-KKACLIF 264
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 265 FDEIDAIGGARFDDGAGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 323
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F LPD E R I +A+ +G +IR VC +A
Sbjct: 324 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 383
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 384 GM-FAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 419
>ZFIN|ZDB-GENE-110411-210 [details] [associations]
symbol:atad2b "ATPase family, AAA domain containing
2B" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
ZFIN:ZDB-GENE-110411-210 GO:GO:0005524 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074694 EMBL:CABZ01035125
EMBL:CABZ01035126 EMBL:CABZ01035127 EMBL:CABZ01035128
EMBL:CABZ01035129 EMBL:CABZ01035130 EMBL:CABZ01035131
EMBL:CABZ01035132 EMBL:CABZ01035133 EMBL:CABZ01035134
EMBL:CABZ01035135 EMBL:CABZ01035136 EMBL:CABZ01035137
EMBL:CABZ01035138 EMBL:FP103080 IPI:IPI00504895
Ensembl:ENSDART00000085416 ArrayExpress:E7FE14 Bgee:E7FE14
Uniprot:E7FE14
Length = 1402
Score = 277 (102.6 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 74/213 (34%), Positives = 110/213 (51%)
Query: 259 GRRIYGLDEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFE 318
G + +D L+TS + ++++ G + +++ ++ L P+V++ KF+
Sbjct: 377 GASLADVDPMNLDTS---VKFDSVGGLTHHIQSLKEMVVFPLLYPQVFE--------KFK 425
Query: 319 SNRPRAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGK 378
PR LF GPPGTGKT AR +AN+ + M + +SK+ GESER L
Sbjct: 426 IQPPRGCLFYGPPGTGKTLVARALANECSQGDRKVSFFMRKGADC-LSKWVGESERQLRL 484
Query: 379 VFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAAT 438
+F A L +IIF DE+D A R S + I+S LL +DG + ++VVI AT
Sbjct: 485 LFDQAY-LMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGAT 543
Query: 439 NRKQDLDPALI--SRFDSMITFGLPDHENRQEI 469
NR +DPAL RFD F LPD + R+ I
Sbjct: 544 NRLDSIDPALRRPGRFDREFLFNLPDKKARKHI 576
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 274 (101.5 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 84/281 (29%), Positives = 140/281 (49%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
+++++ I G Q + I + I L L+ PE++ + PR VL GPPGTGK
Sbjct: 349 KVTYDMIGGLSSQLKAIREIIELPLKQPELFKS--------YGIPPPRGVLLYGPPGTGK 400
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T AR +AN+ GA V ++ P E++ SK+YGE+E L ++F+ A L + +IIF+D
Sbjct: 401 TMIARAVANEVGAY----VSVINGP-EII-SKFYGETEARLRQIFAEAT-LRHPSIIFID 453
Query: 396 EVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK---KVVVIAATNRKQDLDPALI--S 450
E+D+ R+ +E +R+++ LL +DG + +V+V+ ATNR LD AL
Sbjct: 454 ELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPG 513
Query: 451 RFDSMITFGLPDHENRQEIAA---QYAKHXXXXXXXXXXXXXXX-MSGRDIRDVCQQAER 506
RFD I G+P+ +R +I Q H G D++ +C +A
Sbjct: 514 RFDKEIEIGVPNAADRLDILQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGL 573
Query: 507 SWASKIIRGQIT-KDGEQACLPP--LQEYIESATNRRRSLL 544
+++ Q D + A L L ++++ + R S +
Sbjct: 574 YALRRVLNKQPNLSDSKMAGLVKITLNDFLQGMNDIRPSAM 614
Score = 265 (98.3 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 69/197 (35%), Positives = 108/197 (54%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+SW +I G + K +++ + L+ PE + I G + P+ VL GPPG KT
Sbjct: 624 VSWSDIGGLENIKLKLKQAVEWPLKHPESF--IRMGIQ------PPKGVLLYGPPGCSKT 675
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ +AN++G + + + +M+KY GESER + ++F A + + +IIF DE
Sbjct: 676 MIAKALANESG------LNFLAIKGPELMNKYVGESERAVREIFRKARAV-SPSIIFFDE 728
Query: 397 VDSFAVARDSEMH--EATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRF 452
+D+ A+ R S R+L+ LL ++DG EQ K V ++AATNR +D AL+ R
Sbjct: 729 LDALAIERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRI 788
Query: 453 DSMITFGLPDHENRQEI 469
D +I LPD R+EI
Sbjct: 789 DRIIYVPLPDAATRREI 805
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 266 (98.7 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 86/277 (31%), Positives = 134/277 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L PE + ++ E P+ VL GPPGT
Sbjct: 168 KPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLG------IEP--PKGVLLFGPPGT 219
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A +IF
Sbjct: 220 GKTLCARAVANRTDACF-----IRVIGSELVQ-KYVGEGARMVRELFEMART-KKACLIF 272
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 273 FDEIDAIGGARFDDGAGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 331
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F LPD E R I +A+ +G +IR VC +A
Sbjct: 332 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 391
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 392 GM-FAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 427
>UNIPROTKB|F1S7T6 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005813 GO:GO:0001764
GO:GO:0008104 GO:GO:0005811 GO:GO:0030424 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336
GO:GO:0000922 GO:GO:0031122 GeneTree:ENSGT00550000074466
GO:GO:0051329 EMBL:CU915504 Ensembl:ENSSSCT00000004539 OMA:YHGESER
Uniprot:F1S7T6
Length = 263
Score = 249 (92.7 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 81/245 (33%), Positives = 115/245 (46%)
Query: 321 RP-RAVLFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKV 379
RP + VL GPPGTGKT A+ +A + V + SKY GESE+L+ +
Sbjct: 12 RPWKGVLMVGPPGTGKTLLAKAVATECKTT------FFNVSSSTLTSKYRGESEKLVRLL 65
Query: 380 FSLANELPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDGF----EQD---KK 431
F +A + A IF+DE+DS R SE HEA+RR+ + LL Q+DG E D K
Sbjct: 66 FEMAR-FYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKM 124
Query: 432 VVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXX 491
V+V+AATN D+D AL R + I LP + R+E+ +
Sbjct: 125 VMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAEN 184
Query: 492 M---SGRDIRDVCQQAERSWASKIIRGQITKD-----GEQACLPPLQEYIESATNRRRSL 543
M SG DI +VC+ A + I G ++ E+ +P E E A +
Sbjct: 185 MEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMHMPTTMEDFEMALKKVSKS 244
Query: 544 LDAAE 548
+ AA+
Sbjct: 245 VSAAD 249
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 266 (98.7 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 86/277 (31%), Positives = 134/277 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L PE + ++ E P+ VL GPPGT
Sbjct: 169 KPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLG------IEP--PKGVLLFGPPGT 220
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A +IF
Sbjct: 221 GKTLCARAVANRTDACF-----IRVIGSELVQ-KYVGEGARMVRELFEMART-KKACLIF 273
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 274 FDEIDAIGGARFDDGAGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F LPD E R I +A+ +G +IR VC +A
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 393 GM-FAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 266 (98.7 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 86/277 (31%), Positives = 134/277 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L PE + ++ E P+ VL GPPGT
Sbjct: 169 KPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLG------IEP--PKGVLLFGPPGT 220
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A +IF
Sbjct: 221 GKTLCARAVANRTDACF-----IRVIGSELVQ-KYVGEGARMVRELFEMART-KKACLIF 273
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 274 FDEIDAIGGARFDDGAGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F LPD E R I +A+ +G +IR VC +A
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 393 GM-FAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 266 (98.7 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 86/277 (31%), Positives = 134/277 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L PE + ++ E P+ VL GPPGT
Sbjct: 169 KPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLG------IEP--PKGVLLFGPPGT 220
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A +IF
Sbjct: 221 GKTLCARAVANRTDACF-----IRVIGSELVQ-KYVGEGARMVRELFEMART-KKACLIF 273
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 274 FDEIDAIGGARFDDGAGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F LPD E R I +A+ +G +IR VC +A
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 393 GM-FAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 266 (98.7 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 86/277 (31%), Positives = 134/277 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L PE + ++ E P+ VL GPPGT
Sbjct: 169 KPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLG------IEP--PKGVLLFGPPGT 220
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A +IF
Sbjct: 221 GKTLCARAVANRTDACF-----IRVIGSELVQ-KYVGEGARMVRELFEMART-KKACLIF 273
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 274 FDEIDAIGGARFDDGAGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F LPD E R I +A+ +G +IR VC +A
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 393 GM-FAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 266 (98.7 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 86/277 (31%), Positives = 134/277 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L PE + ++ E P+ VL GPPGT
Sbjct: 169 KPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLG------IEP--PKGVLLFGPPGT 220
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A +IF
Sbjct: 221 GKTLCARAVANRTDACF-----IRVIGSELVQ-KYVGEGARMVRELFEMART-KKACLIF 273
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 274 FDEIDAIGGARFDDGAGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F LPD E R I +A+ +G +IR VC +A
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 393 GM-FAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 266 (98.7 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 86/277 (31%), Positives = 134/277 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L PE + ++ E P+ VL GPPGT
Sbjct: 169 KPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLG------IEP--PKGVLLFGPPGT 220
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A +IF
Sbjct: 221 GKTLCARAVANRTDACF-----IRVIGSELVQ-KYVGEGARMVRELFEMART-KKACLIF 273
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 274 FDEIDAIGGARFDDGAGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F LPD E R I +A+ +G +IR VC +A
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 393 GM-FAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 266 (98.7 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 86/277 (31%), Positives = 134/277 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L PE + ++ E P+ VL GPPGT
Sbjct: 170 KPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLG------IEP--PKGVLLFGPPGT 221
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A +IF
Sbjct: 222 GKTLCARAVANRTDACF-----IRVIGSELVQ-KYVGEGARMVRELFEMART-KKACLIF 274
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 275 FDEIDAIGGARFDDGAGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 333
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F LPD E R I +A+ +G +IR VC +A
Sbjct: 334 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 393
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 394 GM-FAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 429
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 266 (98.7 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 87/277 (31%), Positives = 133/277 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G Q ++ + + L PE Y ++ E P+ VL GPPGT
Sbjct: 171 KPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLG------IEP--PKGVLLYGPPGT 222
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A +IF
Sbjct: 223 GKTLCARAVANRTDACF-----IRVIGSELVQ-KYVGEGARMVRELFEMART-KKACLIF 275
Query: 394 LDEVDSFAVAR--DSEM--HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR D + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 276 FDEIDAVGGARFDDGQGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 334
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D + F LPD R I +AK +G +IR VC +A
Sbjct: 335 RPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEA 394
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 395 GM-FAIRARRKVATEKDFLEAINKVVKGYAKFSATPR 430
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 266 (98.7 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 87/277 (31%), Positives = 133/277 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G Q ++ + + L PE Y ++ E P+ VL GPPGT
Sbjct: 171 KPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLG------IEP--PKGVLLYGPPGT 222
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A +IF
Sbjct: 223 GKTLCARAVANRTDACF-----IRVIGSELVQ-KYVGEGARMVRELFEMART-KKACLIF 275
Query: 394 LDEVDSFAVAR--DSEM--HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR D + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 276 FDEIDAVGGARFDDGQGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 334
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D + F LPD R I +AK +G +IR VC +A
Sbjct: 335 RPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEA 394
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 395 GM-FAIRARRKVATEKDFLEAINKVVKGYAKFSATPR 430
>DICTYBASE|DDB_G0284347 [details] [associations]
symbol:vps4 "MIT domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0005768 "endosome" evidence=IEA;ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0284347 GO:GO:0005524 GenomeReviews:CM000153_GR
GO:GO:0031902 GO:GO:0015031 GO:GO:0005768 GO:GO:0016197
Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111 HSSP:O75351
InterPro:IPR015415 Pfam:PF09336 EMBL:AAFI02000064 KO:K12196
OMA:AKCAEYL RefSeq:XP_638572.1 ProteinModelPortal:Q54PT2 SMR:Q54PT2
STRING:Q54PT2 EnsemblProtists:DDB0234037 GeneID:8624544
KEGG:ddi:DDB_G0284347 ProtClustDB:CLSZ2430261 Uniprot:Q54PT2
Length = 444
Score = 266 (98.7 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 63/200 (31%), Positives = 116/200 (58%)
Query: 272 TSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAVLFEGP 330
T+K + W+++AG Q K +++ ++ ++ P+++ G R +P + +L GP
Sbjct: 127 TTKPNVKWDDVAGLYQAKEYLKEAVIFPIKFPQMFT----GNR------KPWKGILLYGP 176
Query: 331 PGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGA 390
PGTGK+ A+ +A + + + P ++V +K+ G+SE+L+ ++F +A E N +
Sbjct: 177 PGTGKSYLAKAVATEISSTFFS-----ISPSDIV-TKWLGDSEKLVKQLFEMARE-KNNS 229
Query: 391 IIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKK-VVVIAATNRKQDLDPALI 449
+IF+DEVDS +R+ + E+ RRI + L Q++G D ++V+AATN LD A+
Sbjct: 230 VIFIDEVDSLCSSRNDQESESARRIKTEFLIQMNGVGNDSDGILVLAATNIPWGLDLAIR 289
Query: 450 SRFDSMITFGLPDHENRQEI 469
RF+ I GLP+ + R ++
Sbjct: 290 RRFEKRIYIGLPEPQARAKM 309
>UNIPROTKB|Q6AZT2 [details] [associations]
symbol:spast "Spastin" species:8355 "Xenopus laevis"
[GO:0001578 "microtubule bundle formation" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0048487 "beta-tubulin binding"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0015630
"microtubule cytoskeleton" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
GO:GO:0048487 GO:GO:0008017 HSSP:O75351 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 GO:GO:0043014 SMART:SM00745
GO:GO:0034214 KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502
EMBL:BC077358 RefSeq:NP_001086725.1 UniGene:Xl.32426
ProteinModelPortal:Q6AZT2 SMR:Q6AZT2 GeneID:446560 KEGG:xla:446560
Xenbase:XB-GENE-947846 Uniprot:Q6AZT2
Length = 600
Score = 270 (100.1 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 68/196 (34%), Positives = 106/196 (54%)
Query: 273 SKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPG 332
S + + +IAG D K+ +++ ++L PE++ G R R +L GPPG
Sbjct: 319 SGPSVKFADIAGQDLAKQALQEIVILPSIRPELFT----GLRAP-----ARGLLLFGPPG 369
Query: 333 TGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAII 392
GKT A+ +A ++ A + + SKY GE E+L+ +FS+A EL +II
Sbjct: 370 NGKTMLAKAVAAESNAT------FFNISAASLTSKYVGEGEKLVRALFSVAREL-QPSII 422
Query: 393 FLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQ--DKKVVVIAATNRKQDLDPALIS 450
F+DEVDS R H+A+RR+ + L + DG + D +V+V+ ATNR Q+LD A++
Sbjct: 423 FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLR 482
Query: 451 RFDSMITFGLPDHENR 466
RF + LP+ E R
Sbjct: 483 RFTKRVYVALPNEETR 498
>UNIPROTKB|B4M0H8 [details] [associations]
symbol:spas "Spastin" species:7244 "Drosophila virilis"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 eggNOG:COG0464 GO:GO:0008017 GO:GO:0008568
GO:GO:0051013 GO:GO:0005874 EMBL:CH940650 SMART:SM00745 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 OMA:FLNISAA RefSeq:XP_002054837.1
EnsemblMetazoa:FBtr0240585 GeneID:6631192 KEGG:dvi:Dvir_GJ24660
FlyBase:FBgn0211737 InParanoid:B4M0H8 Uniprot:B4M0H8
Length = 769
Score = 272 (100.8 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 65/196 (33%), Positives = 106/196 (54%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
+++ W +IAG D K+ +++ ++L PE++ G R + +L GPPG G
Sbjct: 489 AKVEWSDIAGQDVAKQALQEMVILPSVRPELFT----GLRAP-----AKGLLLFGPPGNG 539
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT AR +A + A + + + SKY G+ E+L+ +F++A + +IIF+
Sbjct: 540 KTLLARAVATECSAT------FLNISAASLTSKYVGDGEKLVRALFAVARHM-QPSIIFI 592
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQIDGFE---QDKKVVVIAATNRKQDLDPALISR 451
DEVDS R S HEA+RR+ + L + DG + ++VV+AATNR Q+LD A + R
Sbjct: 593 DEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALRR 652
Query: 452 FDSMITFGLPDHENRQ 467
F + LP + R+
Sbjct: 653 FTKRVYVSLPGVQTRE 668
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 272 (100.8 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 67/201 (33%), Positives = 103/201 (51%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+SW NI + E++ I+ ++ PE+Y + + P VL GPPG GKT
Sbjct: 489 VSWNNIGALKSIRVELQMAIVQPIKRPELYQSVG--------ISAPTGVLLWGPPGCGKT 540
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ +AN++ A + + +++KY GESER + +VF L + +IF DE
Sbjct: 541 LLAKAVANESKAN------FISIRGPELLNKYVGESERAVRQVF-LRARASSPCVIFFDE 593
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDS 454
+D+ RD + EA+ R+++ LL ++DG V VIAATNR +DPA++ R D
Sbjct: 594 LDAMVPRRDDSLSEASSRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDK 653
Query: 455 MITFGLPDHENRQEIAAQYAK 475
+ LPD R EI K
Sbjct: 654 TLLVDLPDAHERVEILKTLTK 674
Score = 255 (94.8 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 73/207 (35%), Positives = 106/207 (51%)
Query: 275 SEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTG 334
S+IS +I G D E+ + + + ++ PEVY G + PR VL GPPG G
Sbjct: 169 SDISLSDIGGLDDCINELLELVAMPIKHPEVYQ--YTGI------HPPRGVLLHGPPGCG 220
Query: 335 KTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFL 394
KT A +AN+ G VP + + ++S GESE+ + +VF A L ++F+
Sbjct: 221 KTMLANALANELG------VPFISISAPSIVSGMSGESEKKVREVFEEAKSLAP-CLMFI 273
Query: 395 DEVDSFAVARDSEMHEATRRILSVLLRQID--GFEQD--KKVVVIAATNRKQDLDPAL-- 448
DE+D+ R+S E RRI++ L +D FE+ K V+VI ATNR LD AL
Sbjct: 274 DEIDAVTPKRESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRR 333
Query: 449 ISRFDSMITFGLPDHENRQEIAAQYAK 475
RFD I +P + R++I AK
Sbjct: 334 AGRFDREICLTVPSQDAREKILRTMAK 360
>UNIPROTKB|Q9PUL2 [details] [associations]
symbol:katna1 "Katanin p60 ATPase-containing subunit A1"
species:8355 "Xenopus laevis" [GO:0000922 "spindle pole"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005819
"spindle" evidence=ISS] [GO:0030496 "midbody" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 GO:GO:0005815
GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 HOVERGEN:HBG057074 HAMAP:MF_03023 EMBL:AF177942
UniGene:Xl.6322 ProteinModelPortal:Q9PUL2 IntAct:Q9PUL2
Xenbase:XB-GENE-995725 Uniprot:Q9PUL2
Length = 486
Score = 267 (99.0 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 83/261 (31%), Positives = 125/261 (47%)
Query: 267 EPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAV 325
E + + I W++IA ++ K+ +++ ++L + PE + +G R RP + V
Sbjct: 193 ERDIISQNPNIRWDDIADLEEAKKLLKEAVVLPMWMPEFF----KGIR------RPWKGV 242
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
L GPPGTGKT A+ +A + + + SKY GESE+L+ +F +A
Sbjct: 243 LMVGPPGTGKTLLAKAVATECKTT------FFNISSSTLTSKYRGESEKLVRLLFEMARF 296
Query: 386 LPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDGF-----EQD--KKVVVIAA 437
IF+DE+DS R SE HEA+RR+ + LL Q+DG +D K V+V+AA
Sbjct: 297 YAP-TTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAA 355
Query: 438 TNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SG 494
TN D+D AL R + I LP + R+E+ K M SG
Sbjct: 356 TNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSG 415
Query: 495 RDIRDVCQQAERSWASKIIRG 515
DI +VC+ A + I G
Sbjct: 416 ADITNVCRDASLMAMRRRIEG 436
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 52/171 (30%), Positives = 84/171 (49%)
Query: 271 NTSKSEISWENIAGYDQQKREIEDTILLSLQSPEV-YDDIARGTRCKFESNRPRAVL--- 326
+ S++E+ + +GYD+ E + ++S Q+P + +DDIA K + + VL
Sbjct: 170 DVSETEVKRFDGSGYDKDLIEALERDIIS-QNPNIRWDDIADLEEAK-KLLKEAVVLPMW 227
Query: 327 ----FEG---P-PGT---GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERL 375
F+G P G G + + +A A + + + SKY GESE+L
Sbjct: 228 MPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECK-TTFFNISSSTLTSKYRGESEKL 286
Query: 376 LGKVFSLANELPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDG 425
+ +F +A IF+DE+DS R SE HEA+RR+ + LL Q+DG
Sbjct: 287 VRLLFEMARFYAP-TTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDG 336
>MGI|MGI:2387638 [details] [associations]
symbol:Katnal1 "katanin p60 subunit A-like 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2387638 GO:GO:0005524 GO:GO:0005737
eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005874 HOVERGEN:HBG057074 CTD:84056 KO:K07767
OrthoDB:EOG4F7NJX HAMAP:MF_03023 HAMAP:MF_03024
HOGENOM:HOG000225142 OMA:GVMQQIQ EMBL:BC030434 IPI:IPI00114980
RefSeq:NP_705800.1 UniGene:Mm.397405 ProteinModelPortal:Q8K0T4
SMR:Q8K0T4 PhosphoSite:Q8K0T4 PaxDb:Q8K0T4 PRIDE:Q8K0T4
Ensembl:ENSMUST00000047257 GeneID:231912 KEGG:mmu:231912
UCSC:uc009aow.2 GeneTree:ENSGT00550000074466 InParanoid:Q8K0T4
NextBio:380863 Bgee:Q8K0T4 CleanEx:MM_KATNAL1 Genevestigator:Q8K0T4
GermOnline:ENSMUSG00000041298 Uniprot:Q8K0T4
Length = 488
Score = 267 (99.0 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 83/261 (31%), Positives = 125/261 (47%)
Query: 267 EPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAV 325
E + + I W++IA ++ K+ + + ++L + P+ + +G R RP + V
Sbjct: 193 ERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFF----KGIR------RPWKGV 242
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
L GPPGTGKT A+ +A + G V + SKY GESE+L+ +F +A
Sbjct: 243 LMVGPPGTGKTMLAKAVATECGTT------FFNVSSSTLTSKYRGESEKLVRLLFEMARF 296
Query: 386 LPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDG----FEQD---KKVVVIAA 437
IF+DE+DS R S+ HEA+RR+ S LL Q+DG E D K V+V+AA
Sbjct: 297 YAP-TTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAA 355
Query: 438 TNRKQDLDPALISRFDSMITFGLPDHENRQE---IAAQYAKHXXXXXXXXXXXXXXXMSG 494
TN D+D AL R + I LP + R E I+ + + SG
Sbjct: 356 TNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKISLREVELDPDVHLEDIADKTEGYSG 415
Query: 495 RDIRDVCQQAERSWASKIIRG 515
DI ++C+ A + I G
Sbjct: 416 ADITNICRDASLMAMRRRING 436
Score = 132 (51.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 58/173 (33%), Positives = 83/173 (47%)
Query: 269 QLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVY-DDIARGTRCKFESNRPRAVL- 326
Q S SEI + AGYD+ E + ++S ++P ++ DDIA K + R VL
Sbjct: 168 QDGASDSEIPKFDGAGYDKDLVEALERDIVS-RNPSIHWDDIADLEEAK-KLLREAVVLP 225
Query: 327 ------FEG---P-PGT---GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESE 373
F+G P G G + + +A A G V + SKY GESE
Sbjct: 226 MWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATEC-GTTFFNVSSSTLTSKYRGESE 284
Query: 374 RLLGKVFSLANELPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDG 425
+L+ +F +A IF+DE+DS R S+ HEA+RR+ S LL Q+DG
Sbjct: 285 KLVRLLFEMARFYAP-TTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDG 336
>RGD|1359252 [details] [associations]
symbol:Katnal1 "katanin p60 subunit A-like 1" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA;ISO] [GO:0007283 "spermatogenesis" evidence=ISO]
[GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA;ISO] [GO:0051013 "microtubule severing" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:1359252
GO:GO:0005524 GO:GO:0005737 eggNOG:COG0464 GO:GO:0008568
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005874 HOVERGEN:HBG057074
CTD:84056 KO:K07767 OrthoDB:EOG4F7NJX HAMAP:MF_03023 HAMAP:MF_03024
HOGENOM:HOG000225142 GeneTree:ENSGT00550000074466 EMBL:BC083673
IPI:IPI00370842 RefSeq:NP_001006957.1 RefSeq:XP_003751164.1
RefSeq:XP_003752600.1 UniGene:Rn.208215 ProteinModelPortal:Q5XIK7
PRIDE:Q5XIK7 Ensembl:ENSRNOT00000001219 GeneID:100910196
GeneID:288449 KEGG:rno:100910196 KEGG:rno:288449 UCSC:RGD:1359252
InParanoid:Q5XIK7 NextBio:628096 Genevestigator:Q5XIK7
GermOnline:ENSRNOG00000000916 Uniprot:Q5XIK7
Length = 488
Score = 267 (99.0 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 83/261 (31%), Positives = 125/261 (47%)
Query: 267 EPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAV 325
E + + I W++IA ++ K+ + + ++L + P+ + +G R RP + V
Sbjct: 193 ERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFF----KGIR------RPWKGV 242
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
L GPPGTGKT A+ +A + G V + SKY GESE+L+ +F +A
Sbjct: 243 LMVGPPGTGKTMLAKAVATECGTT------FFNVSSSTLTSKYRGESEKLVRLLFEMARF 296
Query: 386 LPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDG----FEQD---KKVVVIAA 437
IF+DE+DS R S+ HEA+RR+ S LL Q+DG E D K V+V+AA
Sbjct: 297 YAP-TTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAA 355
Query: 438 TNRKQDLDPALISRFDSMITFGLPDHENRQE---IAAQYAKHXXXXXXXXXXXXXXXMSG 494
TN D+D AL R + I LP + R E I+ + + SG
Sbjct: 356 TNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKISLREVELDPDIHLEDIAEKTEGYSG 415
Query: 495 RDIRDVCQQAERSWASKIIRG 515
DI ++C+ A + I G
Sbjct: 416 ADITNICRDASLMAMRRRING 436
Score = 128 (50.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 57/173 (32%), Positives = 82/173 (47%)
Query: 269 QLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVY-DDIARGTRCKFESNRPRAVL- 326
Q S EI + AGYD+ E + ++S ++P ++ DDIA K + R VL
Sbjct: 168 QDGASDGEIPKFDGAGYDKDLVEALERDIVS-RNPSIHWDDIADLEEAK-KLLREAVVLP 225
Query: 327 ------FEG---P-PGT---GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESE 373
F+G P G G + + +A A G V + SKY GESE
Sbjct: 226 MWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATEC-GTTFFNVSSSTLTSKYRGESE 284
Query: 374 RLLGKVFSLANELPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDG 425
+L+ +F +A IF+DE+DS R S+ HEA+RR+ S LL Q+DG
Sbjct: 285 KLVRLLFEMARFYAP-TTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDG 336
>UNIPROTKB|Q0IIR9 [details] [associations]
symbol:katna1 "Katanin p60 ATPase-containing subunit A1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000922 "spindle
pole" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005819 "spindle" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
GO:GO:0005815 eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415
Pfam:PF09336 GO:GO:0000922 GO:GO:0005874 HOVERGEN:HBG057074
KO:K07767 HAMAP:MF_03023 CTD:11104 EMBL:BC121679
RefSeq:NP_001072433.1 UniGene:Str.53362 ProteinModelPortal:Q0IIR9
GeneID:779887 KEGG:xtr:779887 Xenbase:XB-GENE-995720 Uniprot:Q0IIR9
Length = 492
Score = 267 (99.0 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 83/261 (31%), Positives = 125/261 (47%)
Query: 267 EPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAV 325
E + + I W++IA ++ K+ +++ ++L + PE + +G R RP + V
Sbjct: 197 ERDIISQNPNIRWDDIADLEEAKKLLKEAVVLPMWMPEFF----KGIR------RPWKGV 246
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
L GPPGTGKT A+ +A + + + SKY GESE+L+ +F +A
Sbjct: 247 LMVGPPGTGKTLLAKAVATECKTT------FFNISSSTLTSKYRGESEKLVRLLFEMARF 300
Query: 386 LPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDGF-----EQD--KKVVVIAA 437
IF+DE+DS R SE HEA+RR+ + LL Q+DG +D K V+V+AA
Sbjct: 301 YAP-TTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAA 359
Query: 438 TNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SG 494
TN D+D AL R + I LP + R+E+ K M SG
Sbjct: 360 TNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSG 419
Query: 495 RDIRDVCQQAERSWASKIIRG 515
DI +VC+ A + I G
Sbjct: 420 ADITNVCRDASLMAMRRRIEG 440
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 52/176 (29%), Positives = 86/176 (48%)
Query: 266 DEPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEV-YDDIARGTRCKFESNRPRA 324
++ ++ S++E+ + GYD+ E + ++S Q+P + +DDIA K + +
Sbjct: 169 NKSSVDVSETEVKKFDGTGYDKDLIEALERDIIS-QNPNIRWDDIADLEEAK-KLLKEAV 226
Query: 325 VL-------FEG---P-PGT---GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYG 370
VL F+G P G G + + +A A + + + SKY G
Sbjct: 227 VLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECK-TTFFNISSSTLTSKYRG 285
Query: 371 ESERLLGKVFSLANELPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDG 425
ESE+L+ +F +A IF+DE+DS R SE HEA+RR+ + LL Q+DG
Sbjct: 286 ESEKLVRLLFEMARFYAP-TTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDG 340
>UNIPROTKB|Q1HGK7 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9031 "Gallus gallus" [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0001578 "microtubule bundle formation" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051013 "microtubule severing"
evidence=IEA] [GO:0051329 "interphase of mitotic cell cycle"
evidence=IEA] [GO:0000922 "spindle pole" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005819 "spindle" evidence=ISS]
[GO:0030496 "midbody" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0008104 GO:GO:0051301 GO:GO:0007067
GO:GO:0005811 GO:GO:0030424 eggNOG:COG0464 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336
GO:GO:0000922 GO:GO:0005874 GO:GO:0031122 HOVERGEN:HBG057074
KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
GeneTree:ENSGT00550000074466 EMBL:DQ486889 IPI:IPI00786289
RefSeq:NP_001038113.1 UniGene:Gga.12204 ProteinModelPortal:Q1HGK7
Ensembl:ENSGALT00000020211 GeneID:421626 KEGG:gga:421626 CTD:11104
InParanoid:Q1HGK7 OMA:SQYSDPK OrthoDB:EOG4CJVGZ NextBio:20824364
GO:GO:0051329 Uniprot:Q1HGK7
Length = 492
Score = 267 (99.0 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 90/299 (30%), Positives = 138/299 (46%)
Query: 267 EPQLNTSKSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRP-RAV 325
E + + I W++IA + K+ +++ ++L + PE + +G R RP + V
Sbjct: 197 ERDIISQNPNIRWDDIADLVEAKKLLKEAVVLPMWMPEFF----KGIR------RPWKGV 246
Query: 326 LFEGPPGTGKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANE 385
L GPPGTGKT A+ +A + V + SKY GESE+L+ +F +A
Sbjct: 247 LMVGPPGTGKTLLAKAVATECKTT------FFNVSSSTLTSKYRGESEKLVRLLFEMARF 300
Query: 386 LPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDGF----EQD---KKVVVIAA 437
IF+DE+DS R SE HEA+RR+ + LL Q+DG E D K V+V+AA
Sbjct: 301 YAP-TTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGATENDDPSKMVMVLAA 359
Query: 438 TNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SG 494
TN D+D AL R + I LP + R+E+ + M SG
Sbjct: 360 TNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLRELELADDVDLANIAEKMEGYSG 419
Query: 495 RDIRDVCQQAERSWASKIIRGQITKD-----GEQACLPPLQEYIESATNRRRSLLDAAE 548
DI +VC+ A + I G ++ ++ +P E E A + + AA+
Sbjct: 420 ADITNVCRDASLMAMRRRIEGLTPEEIRNLSRDEMHMPTTMEDFEIALKKVSKSVSAAD 478
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 57/181 (31%), Positives = 86/181 (47%)
Query: 264 GLDEPQLNTSK---SEISWENIAGYDQQKREIEDTILLSLQSPEV-YDDIARGTRCKFES 319
G +E +TS+ SE + GYD+ E + ++S Q+P + +DDIA K +
Sbjct: 164 GKEEKSKSTSEISESEPKKFDSTGYDKDLVEALERDIIS-QNPNIRWDDIADLVEAK-KL 221
Query: 320 NRPRAVL-------FEG---P-PGT---GKTSCARVIANQAGAMPWQGVPLMYVPLEVVM 365
+ VL F+G P G G + + +A A + V +
Sbjct: 222 LKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECK-TTFFNVSSSTLT 280
Query: 366 SKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQID 424
SKY GESE+L+ +F +A IF+DE+DS R SE HEA+RR+ + LL Q+D
Sbjct: 281 SKYRGESEKLVRLLFEMARFYAP-TTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMD 339
Query: 425 G 425
G
Sbjct: 340 G 340
>UNIPROTKB|Q05AS3 [details] [associations]
symbol:spast "Spastin" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0001578 "microtubule bundle formation"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0048487 "beta-tubulin binding"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0015630
"microtubule cytoskeleton" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0051301 GO:GO:0051260 GO:GO:0005815 GO:GO:0007049
Pfam:PF04212 eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 EMBL:CR760974
EMBL:BC123973 RefSeq:NP_001016453.1 UniGene:Str.10574
ProteinModelPortal:Q05AS3 SMR:Q05AS3 STRING:Q05AS3
Ensembl:ENSXETT00000057121 GeneID:549207 KEGG:xtr:549207
Xenbase:XB-GENE-947839 Bgee:Q05AS3 Uniprot:Q05AS3
Length = 603
Score = 269 (99.8 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 67/192 (34%), Positives = 105/192 (54%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+ + +IAG D K+ +++ ++L PE++ G R R +L GPPG GKT
Sbjct: 326 VKFADIAGQDLAKQALQEIVILPSIRPELFT----GLRAP-----ARGLLLFGPPGNGKT 376
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ +A ++ A + + SKY GE E+L+ +FS+A EL +IIF+DE
Sbjct: 377 MLAKAVAAESNAT------FFNISAASLTSKYVGEGEKLVRALFSVAREL-QPSIIFIDE 429
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFEQ--DKKVVVIAATNRKQDLDPALISRFDS 454
VDS R H+A+RR+ + L + DG + D +V+V+ ATNR Q+LD A++ RF
Sbjct: 430 VDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLRRFTK 489
Query: 455 MITFGLPDHENR 466
+ LP+ E R
Sbjct: 490 RVYVSLPNEETR 501
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 266 (98.7 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 86/277 (31%), Positives = 134/277 (48%)
Query: 274 KSEISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGT 333
K ++++ ++ G +Q ++ + + L PE + ++ E P+ VL GPPGT
Sbjct: 211 KPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLG------IEP--PKGVLLFGPPGT 262
Query: 334 GKTSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIF 393
GKT CAR +AN+ A + + E+V KY GE R++ ++F +A +IF
Sbjct: 263 GKTLCARAVANRTDACF-----IRVIGSELVQ-KYVGEGARMVRELFEMART-KKACLIF 315
Query: 394 LDEVDSFAVARDSEM----HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI 449
DE+D+ AR + +E R +L L+ Q+DGF+ + V+ ATNR LDPAL+
Sbjct: 316 FDEIDAIGGARFDDGAGGDNEVQRTMLE-LINQLDGFDPRGNIKVLMATNRPDTLDPALM 374
Query: 450 --SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 504
R D I F LPD E R I +A+ +G +IR VC +A
Sbjct: 375 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 434
Query: 505 ERSWASKIIRGQIT-KDGEQACLPPLQEYIE-SATNR 539
+A + R T KD +A ++ Y + SAT R
Sbjct: 435 GM-FAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 470
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 271 (100.5 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 70/203 (34%), Positives = 110/203 (54%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+S+ + G D++ ++ I + L P ++ F + PR +L GPPGTGKT
Sbjct: 242 LSYAAVGGLDKEIESLKSAIEIPLHQPTLFSS--------FGVSPPRGILLHGPPGTGKT 293
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
RV+AN + A ++ + ++SKY GE+E L +F+ A + +IIF+DE
Sbjct: 294 MLLRVVANTSNAH------VLTINGPSIVSKYLGETEAALRDIFNEARKY-QPSIIFIDE 346
Query: 397 VDSFAVAR-DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFD 453
+DS A R + + E R+++ LL +DG KVVVIAATNR +DPAL RFD
Sbjct: 347 IDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFD 406
Query: 454 SMITFGLPDHENRQEIAA-QYAK 475
+ G+PD + R +I Q+++
Sbjct: 407 QEVEIGIPDVDARFDILTKQFSR 429
Score = 271 (100.5 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 67/202 (33%), Positives = 107/202 (52%)
Query: 276 EISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGK 335
++ W +I G ++ K ++++ I L L++ E + + + P+ VL GPPG K
Sbjct: 512 KVYWSDIGGQEELKTKMKEMIQLPLEASETF--------ARLGISAPKGVLLYGPPGCSK 563
Query: 336 TSCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLD 395
T A+ +A ++G + + V + +KY GESER + ++F A +IIF D
Sbjct: 564 TLTAKALATESG------INFLAVKGPEIFNKYVGESERAIREIFRKARSAAP-SIIFFD 616
Query: 396 EVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFD 453
E+D+ + RD A +L+ LL +IDG E+ K VV++AATNR ++D AL+ R D
Sbjct: 617 EIDALSPDRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLD 676
Query: 454 SMITFGLPDHENRQEIAAQYAK 475
I G PD R EI + K
Sbjct: 677 RHIYVGPPDVNARLEILKKCTK 698
>UNIPROTKB|G4MSN3 [details] [associations]
symbol:MGG_07075 "ATPase family AAA domain-containing
protein 1" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0017111 EMBL:CM001232
RefSeq:XP_003715261.1 ProteinModelPortal:G4MSN3
EnsemblFungi:MGG_07075T0 GeneID:2682960 KEGG:mgr:MGG_07075
Uniprot:G4MSN3
Length = 424
Score = 263 (97.6 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 74/264 (28%), Positives = 122/264 (46%)
Query: 277 ISWENIAGYDQQKREIEDTILLSLQSPEVYDDIARGTRCKFESNRPRAVLFEGPPGTGKT 336
+ ++ I G + E++++++ L P +Y A + P VL GPPG GKT
Sbjct: 112 VGFDAIGGLEDIIEEVKESVIYPLTMPHLYSHAAPLL------SAPSGVLLYGPPGCGKT 165
Query: 337 SCARVIANQAGAMPWQGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDE 396
A+ +A+++GA + + + + K+YG+S +L+ VFSLA +L AIIF+DE
Sbjct: 166 MLAKAVAHESGAS------FINLHISTLTEKWYGDSNKLVRAVFSLARKL-QPAIIFIDE 218
Query: 397 VDSFAVARDSEMHEATRRILSVLLRQIDGFEQ------DKKVVVIAATNRKQDLDPALIS 450
+D+ R S HEA+ + + + DG +++V+ ATNR D+D A++
Sbjct: 219 IDAVLGTRRSGEHEASGMVKAEFMTLWDGLTSANASGVPSRIMVLGATNRINDIDEAILR 278
Query: 451 RFDSMITFGLPDHENRQEIA----AQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAER 506
R LP E R+ I + + MSG +I+D C+ A
Sbjct: 279 RMPKKFPVPLPGTEQRRRILELILGETKRDPEHFDLEYIAAVTAGMSGSEIKDACRDAAM 338
Query: 507 SWASKIIRGQITKDGEQACLPPLQ 530
S + IR Q A + P Q
Sbjct: 339 SPMREFIRTQRAAGTPMASIDPTQ 362
WARNING: HSPs involving 430 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 567 536 0.00093 119 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 680
No. of states in DFA: 614 (65 KB)
Total size of DFA: 295 KB (2153 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.97u 0.10s 44.07t Elapsed: 00:00:02
Total cpu time: 44.02u 0.10s 44.12t Elapsed: 00:00:02
Start: Fri May 10 23:02:12 2013 End: Fri May 10 23:02:14 2013
WARNINGS ISSUED: 2